>ref|XM_475575.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1230

 Score =  127 bits (64), Expect = 4e-26
 Identities = 184/224 (82%)
 Strand = Plus / Minus

                                                                        
Query: 184  ctatggtgccaacatcacccaagcctacaccaatgcagatgggactgttcttctgtacag 243
            ||||||||||||||||  | ||  |||| || ||| ||| |||| | ||||||||| |||
Sbjct: 1180 ctatggtgccaacatcctctaacactactccgatgaagaggggattcttcttctgtgcag 1121

                                                                        
Query: 244  agccctcactccgaagccgcacatttgggcccagaccgcatttccccaagcatttgcatc 303
             ||| || ||||| ||||||||||| ||||| |||||||||||||||| ||||||||| |
Sbjct: 1120 cgccttcgctccggagccgcacattcgggcctagaccgcatttccccaggcatttgcagc 1061

                                                                        
Query: 304  cgaccaccgtgccgcccatgccaagctccgtctcaaactcctgcaggacggcaagcgagc 363
            | || ||||  ||  |  |||| | || | |||| ||||||||||| || || || ||||
Sbjct: 1060 caacgaccgcaccatcagtgcccaccttcttctcgaactcctgcagcaccgcgagggagc 1001

                                                        
Query: 364  ccgccttcttgcatttgccacccatgcagacctcaattctgttc 407
            |||  |||||||||||||| ||||||||||||||||||||||||
Sbjct: 1000 ccgatttcttgcatttgcctcccatgcagacctcaattctgttc 957

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  127 bits (64), Expect = 4e-26
 Identities = 184/224 (82%)
 Strand = Plus / Minus

                                                                           
Query: 184     ctatggtgccaacatcacccaagcctacaccaatgcagatgggactgttcttctgtacag 243
               ||||||||||||||||  | ||  |||| || ||| ||| |||| | ||||||||| |||
Sbjct: 2113587 ctatggtgccaacatcctctaacactactccgatgaagaggggattcttcttctgtgcag 2113528

                                                                           
Query: 244     agccctcactccgaagccgcacatttgggcccagaccgcatttccccaagcatttgcatc 303
                ||| || ||||| ||||||||||| ||||| |||||||||||||||| ||||||||| |
Sbjct: 2113527 cgccttcgctccggagccgcacattcgggcctagaccgcatttccccaggcatttgcagc 2113468

                                                                           
Query: 304     cgaccaccgtgccgcccatgccaagctccgtctcaaactcctgcaggacggcaagcgagc 363
               | || ||||  ||  |  |||| | || | |||| ||||||||||| || || || ||||
Sbjct: 2113467 caacgaccgcaccatcagtgcccaccttcttctcgaactcctgcagcaccgcgagggagc 2113408

                                                           
Query: 364     ccgccttcttgcatttgccacccatgcagacctcaattctgttc 407
               |||  |||||||||||||| ||||||||||||||||||||||||
Sbjct: 2113407 ccgatttcttgcatttgcctcccatgcagacctcaattctgttc 2113364

>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08,
             complete sequence
          Length = 112268

 Score =  127 bits (64), Expect = 4e-26
 Identities = 184/224 (82%)
 Strand = Plus / Minus

                                                                         
Query: 184   ctatggtgccaacatcacccaagcctacaccaatgcagatgggactgttcttctgtacag 243
             ||||||||||||||||  | ||  |||| || ||| ||| |||| | ||||||||| |||
Sbjct: 80428 ctatggtgccaacatcctctaacactactccgatgaagaggggattcttcttctgtgcag 80369

                                                                         
Query: 244   agccctcactccgaagccgcacatttgggcccagaccgcatttccccaagcatttgcatc 303
              ||| || ||||| ||||||||||| ||||| |||||||||||||||| ||||||||| |
Sbjct: 80368 cgccttcgctccggagccgcacattcgggcctagaccgcatttccccaggcatttgcagc 80309

                                                                         
Query: 304   cgaccaccgtgccgcccatgccaagctccgtctcaaactcctgcaggacggcaagcgagc 363
             | || ||||  ||  |  |||| | || | |||| ||||||||||| || || || ||||
Sbjct: 80308 caacgaccgcaccatcagtgcccaccttcttctcgaactcctgcagcaccgcgagggagc 80249

                                                         
Query: 364   ccgccttcttgcatttgccacccatgcagacctcaattctgttc 407
             |||  |||||||||||||| ||||||||||||||||||||||||
Sbjct: 80248 ccgatttcttgcatttgcctcccatgcagacctcaattctgttc 80205

>dbj|AK067812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114P12, full
            insert sequence
          Length = 1497

 Score =  121 bits (61), Expect = 3e-24
 Identities = 148/177 (83%)
 Strand = Plus / Minus

                                                                        
Query: 231  ttcttctgtacagagccctcactccgaagccgcacatttgggcccagaccgcatttcccc 290
            ||||||||| ||| ||| || ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 1245 ttcttctgtgcagcgccttcgctccggagccgcacattcgggcctagaccgcatttcccc 1186

                                                                        
Query: 291  aagcatttgcatccgaccaccgtgccgcccatgccaagctccgtctcaaactcctgcagg 350
            | ||||||||| || || ||||  ||  |  |||| | || | |||| ||||||||||| 
Sbjct: 1185 aggcatttgcagccaacgaccgcaccatcagtgcccaccttcttctcgaactcctgcagc 1126

                                                                     
Query: 351  acggcaagcgagcccgccttcttgcatttgccacccatgcagacctcaattctgttc 407
            || || || |||||||  |||||||||||||| ||||||||||||||||||||||||
Sbjct: 1125 accgcgagggagcccgatttcttgcatttgcctcccatgcagacctcaattctgttc 1069

>gb|AY104219.1| Zea mays PCO130396 mRNA sequence
          Length = 960

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 334 tctcaaactcctgcaggacggcaagcgagcccgccttcttgcatttgccacccatgcaga 393
           |||| ||||||||||| |  |||| || ||| | ||||||||||||||| ||||||||||
Sbjct: 545 tctcgaactcctgcagaagagcaaccgcgcctgacttcttgcatttgccccccatgcaga 486

                      
Query: 394 cctcaattctg 404
           |||||||||||
Sbjct: 485 cctcaattctg 475



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 180 gccactatggtgccaacatcacccaagcctacaccaatgcaga 222
           ||||| ||||||||||||||  | ||||||||||| |||||||
Sbjct: 708 gccacgatggtgccaacatcttcaaagcctacaccgatgcaga 666

>gb|AF123432.1|AF123432 Bovine enterovirus isolate K2577, complete genome
          Length = 7405

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 127  caggtccaggttcgtatcagttc 149
            |||||||||||||||||||||||
Sbjct: 1780 caggtccaggttcgtatcagttc 1802

>emb|BX470072.8| Zebrafish DNA sequence from clone DKEY-163I6 in linkage group 21,
              complete sequence
          Length = 211164

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 403    tgttcagcactggtttttcaa 423
              |||||||||||||||||||||
Sbjct: 195523 tgttcagcactggtttttcaa 195503

>ref|NM_001005508.1| Mus musculus Rho GTPase activating protein 30 (Arhgap30), mRNA
          Length = 4457

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 gctccgtctcaaactcctgc 347
           ||||||||||||||||||||
Sbjct: 475 gctccgtctcaaactcctgc 456

>gb|AC125082.3| Mus musculus BAC clone RP24-90M24 from chromosome 10, complete sequence
          Length = 226256

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 378    ttgccacccatgcagacctcaattctgt 405
              |||||||||| || ||||||||||||||
Sbjct: 219401 ttgccacccaggctgacctcaattctgt 219428

>gb|AC124445.4| Mus musculus BAC clone RP24-191B18 from chromosome 10, complete sequence
          Length = 190295

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 378    ttgccacccatgcagacctcaattctgt 405
              |||||||||| || ||||||||||||||
Sbjct: 117983 ttgccacccaggctgacctcaattctgt 117956

>gb|AC132260.3| Mus musculus BAC clone RP24-370C1 from chromosome 13, complete
            sequence
          Length = 160903

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   catttgccagacaaaacaag 89
            ||||||||||||||||||||
Sbjct: 3216 catttgccagacaaaacaag 3197

>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence
          Length = 221903

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     catttgccagacaaaacaag 89
              ||||||||||||||||||||
Sbjct: 218079 catttgccagacaaaacaag 218060

>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    tcttgtaaataccaacctga 124
              ||||||||||||||||||||
Sbjct: 919694 tcttgtaaataccaacctga 919713

>emb|AL355499.15| Human DNA sequence from clone RP11-328K6 on chromosome 6 Contains the 5'
              end of the EEF1E1 gene for eukaryotic translation
              elongation factor 1 epsilon 1 and a CpG island, complete
              sequence
          Length = 198141

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     catttgccagacaaaacaag 89
              ||||||||||||||||||||
Sbjct: 169203 catttgccagacaaaacaag 169222

>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02,
             complete sequence
          Length = 172435

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   caacaaccgcaatgctggtg 440
             ||||||||||||||||||||
Sbjct: 40185 caacaaccgcaatgctggtg 40204

>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project)
          Length = 86690

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    cagacaaaacaagttgtagtagta 100
             |||||||||||||| |||||||||
Sbjct: 60060 cagacaaaacaagtagtagtagta 60037

>gb|BC082573.1| Mus musculus Rho GTPase activating protein 30, mRNA (cDNA clone
           MGC:99989 IMAGE:30548035), complete cds
          Length = 4457

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 gctccgtctcaaactcctgc 347
           ||||||||||||||||||||
Sbjct: 475 gctccgtctcaaactcctgc 456

>emb|BX539313.4| Zebrafish DNA sequence from clone DKEYP-84F3 in linkage group 16,
              complete sequence
          Length = 215158

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    atttgaggcactatgatggg 526
              ||||||||||||||||||||
Sbjct: 126222 atttgaggcactatgatggg 126203

>gb|L10986.2| Caenorhabditis elegans cosmid F10E9, complete sequence
          Length = 47233

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    acaaaacaagttgtagtagt 99
             ||||||||||||||||||||
Sbjct: 23411 acaaaacaagttgtagtagt 23430

>dbj|AK147757.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library,
           clone:G270026A07 product:similar to Cdc42
           GTPase-activating protein (Fragment) [Homo sapiens],
           full insert sequence
          Length = 4646

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 gctccgtctcaaactcctgc 347
           ||||||||||||||||||||
Sbjct: 534 gctccgtctcaaactcctgc 515

>dbj|AK031319.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030405P05 product:hypothetical
           RhoGAP domain containing protein, full insert sequence
          Length = 2262

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 gctccgtctcaaactcctgc 347
           ||||||||||||||||||||
Sbjct: 298 gctccgtctcaaactcctgc 279

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 421      caacaaccgcaatgctggtg 440
                ||||||||||||||||||||
Sbjct: 16510952 caacaaccgcaatgctggtg 16510971

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 365      cgccttcttgcatttgccac 384
                ||||||||||||||||||||
Sbjct: 35759132 cgccttcttgcatttgccac 35759151

>gb|AC009742.4|AC009742 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone
              BACR21K03, complete sequence
          Length = 178100

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    ggtcttgtaaataccaacct 122
              ||||||||||||||||||||
Sbjct: 177130 ggtcttgtaaataccaacct 177149

>gb|AC007810.6|AC007810 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone
             BACR14A01, complete sequence
          Length = 176735

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ggtcttgtaaataccaacct 122
             ||||||||||||||||||||
Sbjct: 71011 ggtcttgtaaataccaacct 71030

>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2
          Length = 180000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    aactcctgcaggacggcaag 358
              ||||||||||||||||||||
Sbjct: 159415 aactcctgcaggacggcaag 159396

>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   gggaaaactgtgcttgcagg 544
             ||||||||||||||||||||
Sbjct: 89666 gggaaaactgtgcttgcagg 89685

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 339     aactcctgcaggacggcaag 358
               ||||||||||||||||||||
Sbjct: 2037900 aactcctgcaggacggcaag 2037881

>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1149_C12
          Length = 120743

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   cgccttcttgcatttgccac 384
             ||||||||||||||||||||
Sbjct: 29847 cgccttcttgcatttgccac 29866

>dbj|AK109486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H07, full
           insert sequence
          Length = 912

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 caacaaccgcaatgctggtg 440
           ||||||||||||||||||||
Sbjct: 638 caacaaccgcaatgctggtg 657

>dbj|AK101242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031P14, full
           insert sequence
          Length = 830

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 caacaaccgcaatgctggtg 440
           ||||||||||||||||||||
Sbjct: 552 caacaaccgcaatgctggtg 571

>gb|AE003719.3| Drosophila melanogaster chromosome 3R, section 57 of 118 of the
             complete sequence
          Length = 212941

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ggtcttgtaaataccaacct 122
             ||||||||||||||||||||
Sbjct: 24233 ggtcttgtaaataccaacct 24252

>gb|AC087229.27| Mus musculus strain C57BL/6J chromosome 1 clone rp23-191a19, complete
              sequence
          Length = 215043

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    gctccgtctcaaactcctgc 347
              ||||||||||||||||||||
Sbjct: 145947 gctccgtctcaaactcctgc 145928

>gb|M59242.1|RHBRPON1 Bradyrhizobium japonicum RNA polymerase sigma-54 subunit (ropN1)
           gene, complete cds
          Length = 1738

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 aactcctgcaggacggcaag 358
           ||||||||||||||||||||
Sbjct: 714 aactcctgcaggacggcaag 695


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,463,798
Number of Sequences: 3902068
Number of extensions: 4463798
Number of successful extensions: 253805
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 253661
Number of HSP's gapped (non-prelim): 141
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)