Clone Name | rbasd25i09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YQBQ_BACSU (P45950) Hypothetical protein yqbQ | 30 | 4.4 | 2 | PTDSR_HYDAT (Q6Q4H1) Protein PSR (Phosphatidylserine receptor) | 30 | 5.7 | 3 | YAN2_SCHPO (Q10068) Hypothetical protein C3H1.02c in chromosome I | 29 | 9.8 | 4 | K6PF1_YEAST (P16861) 6-phosphofructokinase alpha subunit (EC 2.7... | 29 | 9.8 | 5 | TEAD4_CHICK (P48984) Transcriptional enhancer factor TEF-3 (TEA ... | 29 | 9.8 |
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>YQBQ_BACSU (P45950) Hypothetical protein yqbQ| Length = 326 Score = 30.4 bits (67), Expect = 4.4 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 329 LSDTMTQSKYDRQQTNKCYRSLDGDMEGISSLG 231 ++DT T+ K RQ+ NK Y + D GIS G Sbjct: 197 INDTATKVKLRRQKDNKTYTATASDSSGISKYG 229
>PTDSR_HYDAT (Q6Q4H1) Protein PSR (Phosphatidylserine receptor)| Length = 385 Score = 30.0 bits (66), Expect = 5.7 Identities = 20/58 (34%), Positives = 26/58 (44%) Frame = -3 Query: 341 VDDRLSDTMTQSKYDRQQTNKCYRSLDGDMEGISSLGNDNRFSIPMAHAMMTLPDDHC 168 +D R D + ++K K L GD EG + LG N F + H TLP HC Sbjct: 1 MDKRTDDAVRETKL------KARPELKGD-EGWTRLGYANNFDLSYQHIKDTLPRIHC 51
>YAN2_SCHPO (Q10068) Hypothetical protein C3H1.02c in chromosome I| Length = 1036 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = -1 Query: 607 SSPVCEDGKTSMNHAADLAIECMETSE*KVLVDYNYYQIGQQKNACARVAVRKIR 443 S V + + + + D+ +CM TS+ V Y YY+ G + ++++ KIR Sbjct: 147 SGVVYSEMQNTQSSETDVMFDCMRTSQYPVTSGY-YYETGGHPSELRKLSIEKIR 200
>K6PF1_YEAST (P16861) 6-phosphofructokinase alpha subunit (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (6PF-1-K alpha subunit) Length = 987 Score = 29.3 bits (64), Expect = 9.8 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = -1 Query: 580 TSMNHAADLAIECMETSE*KVLVDYNYYQIGQQK---NACARVAVRKIRRNKTTQQDQQV 410 TS + ++ +E + SE VD + ++I QQ+ A ++ A+ KIR + D+ Sbjct: 56 TSQDSLREVWLESFKLSE----VDASGFRIPQQEATNKAQSQGALLKIRLVMSAPIDETF 111 Query: 409 DTNFTSGSTSKDNDVNHILRQ 347 DTN T+ T D+N I+ + Sbjct: 112 DTNETATITYFSTDLNKIVEK 132
>TEAD4_CHICK (P48984) Transcriptional enhancer factor TEF-3 (TEA domain family| member 4) (TEAD-4) (TEF-1) (M-CAT-binding factor) (RTEF-1) Length = 438 Score = 29.3 bits (64), Expect = 9.8 Identities = 19/86 (22%), Positives = 33/86 (38%) Frame = -1 Query: 496 QIGQQKNACARVAVRKIRRNKTTQQDQQVDTNFTSGSTSKDNDVNHILRQDMLMIVLVTQ 317 Q+ AR R+I+ Q + D + T+KD + I I+ T Sbjct: 89 QVSSHIQVLARRKAREIQAKLKKTQVDKYDFSSEKDQTAKDKAMQSIATMSSAQIISATA 148 Query: 316 *HSQSMIANRQTSVIGALTVIWKESL 239 HS+ + S A++ W+ +L Sbjct: 149 FHSKMALPGLPRSAYPAVSGFWQGAL 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,674,281 Number of Sequences: 219361 Number of extensions: 1388447 Number of successful extensions: 4125 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4062 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4125 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)