>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 548    gatggccagatcggctgcatggt 570
              |||||||||||||||||||||||
Sbjct: 471890 gatggccagatcggctgcatggt 471912

>emb|AL583822.6| Human DNA sequence from clone RP11-117M4 on chromosome 6, complete
             sequence
          Length = 126614

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 460   ctacccttgcacatgcatttttctgtt 486
             ||||||||||||| |||||||||||||
Sbjct: 80392 ctacccttgcacaagcatttttctgtt 80418

>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02,
             complete sequence
          Length = 99795

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 467   tgcacatgcatttttctgttg 487
             |||||||||||||||||||||
Sbjct: 78132 tgcacatgcatttttctgttg 78112

>gb|AC119168.10| Mus musculus chromosome 15, clone RP24-341L14, complete sequence
          Length = 134714

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 20    agcataagcaaatgaaaacatgtgc 44
             |||||||||| ||||||||||||||
Sbjct: 72350 agcataagcacatgaaaacatgtgc 72374

>emb|Z82200.1|HS333E23 Human DNA sequence from clone RP3-333E23 on chromosome Xq21.1 Contains
             the P2RY10 gene for purinergic receptor P2Y G-protein
             coupled 10, complete sequence
          Length = 128011

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 425   ttgtgttgttttatttcttct 445
             |||||||||||||||||||||
Sbjct: 55488 ttgtgttgttttatttcttct 55468

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 546    tcgatggccagatcggctgcatggt 570
              |||| ||||||||||||||||||||
Sbjct: 602387 tcgacggccagatcggctgcatggt 602363

>emb|AL353697.21| Human DNA sequence from clone RP11-364F8 on chromosome 13 Contains part
             of the PCCA gene for propionyl Coenzyme A carboxylase
             alpha polypeptide, complete sequence
          Length = 132765

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    aaaacatgtgctgacatatag 54
             |||||||||||||||||||||
Sbjct: 52776 aaaacatgtgctgacatatag 52756

>gb|AC092397.1|AC092397 Drosophila melanogaster, chromosome 2L, region 26C-26D, BAC clone
              BACR22N03, complete sequence
          Length = 167201

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 432    gttttatttcttctgattttt 452
              |||||||||||||||||||||
Sbjct: 112403 gttttatttcttctgattttt 112383

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 467      tgcacatgcatttttctgttg 487
                |||||||||||||||||||||
Sbjct: 24475459 tgcacatgcatttttctgttg 24475439

>gb|BT024007.1| Zea mays clone EL01N0403A09 mRNA sequence
          Length = 1758

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 134  agagatgcggcatatagatgg 154
            |||||||||||||||||||||
Sbjct: 1020 agagatgcggcatatagatgg 1000

>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete
             sequence
          Length = 270751

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 432   gttttatttcttctgattttt 452
             |||||||||||||||||||||
Sbjct: 27686 gttttatttcttctgattttt 27666

>gb|AC004303.1|AC004303 Drosophila melanogaster DNA sequence (P1 DS06475 (D195)), complete
             sequence
          Length = 66899

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 432   gttttatttcttctgattttt 452
             |||||||||||||||||||||
Sbjct: 59466 gttttatttcttctgattttt 59486

>gb|AC155076.17| Mus musculus chromosome 1, clone RP24-257G18, complete sequence
          Length = 224817

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 272    gataacacttgtttgtctgtt 292
              |||||||||||||||||||||
Sbjct: 191406 gataacacttgtttgtctgtt 191386

>gb|AC149057.7| Mus musculus BAC clone RP23-345D18 from chromosome 7, complete sequence
          Length = 189323

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 420   tcttgttgtgttgttttatttctt 443
             ||||||||| ||||||||||||||
Sbjct: 93015 tcttgttgttttgttttatttctt 92992

>gb|AC107684.7| Mus musculus chromosome 5, clone RP24-389O5, complete sequence
          Length = 121239

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   tctcaaaatatgatttacat 369
             ||||||||||||||||||||
Sbjct: 29771 tctcaaaatatgatttacat 29790

>gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, complete sequence
          Length = 216399

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atacatagtagtttaagtct 97
             ||||||||||||||||||||
Sbjct: 94191 atacatagtagtttaagtct 94210

>gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, complete sequence
          Length = 180335

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     ataagcaaatgaaaacatgt 42
              ||||||||||||||||||||
Sbjct: 174659 ataagcaaatgaaaacatgt 174640

>gb|AC109153.13| Mus musculus chromosome 15, clone RP23-51J23, complete sequence
          Length = 222164

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   ttttatttcttctgattttt 452
             ||||||||||||||||||||
Sbjct: 40917 ttttatttcttctgattttt 40898

>gb|AC139334.3| Mus musculus BAC clone RP23-449C21 from chromosome 18, complete
             sequence
          Length = 194665

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   atttcttctgatttttctaa 456
             ||||||||||||||||||||
Sbjct: 98402 atttcttctgatttttctaa 98383

>emb|AL158033.18| Human DNA sequence from clone RP3-336G18 on chromosome 6, complete
             sequence
          Length = 102282

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   atttcttctgatttttctaa 456
             ||||||||||||||||||||
Sbjct: 37936 atttcttctgatttttctaa 37917

>emb|AL035551.6|HS1100E15 Human DNA sequence from clone RP5-1100E15 on chromosome Xq22.1-22.3
             Contains a checkpoint suppressor 1 (CHES1) pseudogene, a
             nuclear RNA export factor (NXF) family pseudogene, the
             gene for a novel protein (FLJ12969, FLJ39373) and a
             histone 3 H3 (HIST3H3) pseudogene, complete sequence
          Length = 103344

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ataagcaaatgaaaacatgt 42
             ||||||||||||||||||||
Sbjct: 10414 ataagcaaatgaaaacatgt 10395

>emb|BX322654.15| Zebrafish DNA sequence from clone DKEY-46G23 in linkage group 5,
             complete sequence
          Length = 118113

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    agcataagcaaatgaaaaca 39
             ||||||||||||||||||||
Sbjct: 43393 agcataagcaaatgaaaaca 43374

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 551     ggccagatcggctgcatggt 570
               ||||||||||||||||||||
Sbjct: 4367619 ggccagatcggctgcatggt 4367638

>gb|AC008577.7| Homo sapiens chromosome 5 clone CTC-558D17, complete sequence
          Length = 77686

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ataagcaaatgaaaacatgt 42
             ||||||||||||||||||||
Sbjct: 58935 ataagcaaatgaaaacatgt 58954

>gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206093

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atacatagtagtttaagtct 97
              ||||||||||||||||||||
Sbjct: 172821 atacatagtagtttaagtct 172840

>ref|NM_174393.2| Bos taurus mitochondrial translational initiation factor 2 (MTIF2),
           mRNA
          Length = 2406

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gcataagcaaatgaaaacatgtgc 44
           ||||||||| ||||||||||||||
Sbjct: 303 gcataagcagatgaaaacatgtgc 280

>gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosome 7, complete sequence
          Length = 249504

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 420   tcttgttgtgttgttttatttctt 443
             ||||||||| ||||||||||||||
Sbjct: 14697 tcttgttgttttgttttatttctt 14674

>gb|AC112267.4| Mus musculus BAC clone RP24-84L8 from 9, complete sequence
          Length = 188376

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     ctgatacatagtagtttaagtcta 98
              ||||||||||||||||||| ||||
Sbjct: 143894 ctgatacatagtagtttaaatcta 143871

>dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complete genome
          Length = 105340

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   atttcttctgatttttctaa 456
             ||||||||||||||||||||
Sbjct: 16553 atttcttctgatttttctaa 16572

>gb|L37835.1|BOVIF2MT Bovine nuclear-encoded mitochondrial translational initiation
           factor 2 mRNA, complete CDS
          Length = 2406

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gcataagcaaatgaaaacatgtgc 44
           ||||||||| ||||||||||||||
Sbjct: 303 gcataagcagatgaaaacatgtgc 280

>gb|AC160528.9| Mus musculus chromosome 15, clone RP23-310L8, complete sequence
          Length = 174502

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   ttttatttcttctgattttt 452
             ||||||||||||||||||||
Sbjct: 41577 ttttatttcttctgattttt 41596

>emb|AL627078.10| Mouse DNA sequence from clone RP23-138K13 on chromosome 4, complete
            sequence
          Length = 90129

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 304  tttgactgtgtcattgtgtcacta 327
            ||||||| ||||||||||||||||
Sbjct: 4320 tttgactttgtcattgtgtcacta 4297


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,347,822
Number of Sequences: 3902068
Number of extensions: 6347822
Number of successful extensions: 132857
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132716
Number of HSP's gapped (non-prelim): 141
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)