>HRK1_YEAST (Q08732) Serine/threonine-protein kinase HRK1 (EC 2.7.11.1)|
           (Hygromycin resistance kinase 1)
          Length = 759

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +3

Query: 24  STTPLYYNTAN*NYSENMVHNEHFSISA*KYSSCWEPEYGVNITAGVPDYT 176
           +TT   Y T N N + +  H+   SIS   Y++ +E  +  NI+ G+ DYT
Sbjct: 63  TTTTTNYTTTNLNNNTHS-HSNATSISTNNYNNNYETNHHHNISHGLHDYT 112

>MEFV_MOUSE (Q9JJ26) Pyrin (Marenostrin)|
          Length = 767

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 337 AGGAWARCAPCGCLHLTCLCHRSSTRNSPQCEGRRMEQLLLLICPE 474
           A G  + C  C  L     C   S ++ PQC  R M+Q+LLL C +
Sbjct: 414 ASGRCSICFQCQGLLARKSCEAQSPQSLPQCP-RHMKQVLLLFCED 458

>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein|
           5.3) (Ultrahigh sulfur keratin-associated protein 5.3)
           (Keratin-associated protein 5-9) (Keratin-associated
           protein 5.9) (UHS KerB-like)
          Length = 238

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 10/61 (16%)
 Frame = +1

Query: 280 CGESISLQLQHPSSCWSRGA--------GGAWARCAPCGCLHLTCL--CHRSSTRNSPQC 429
           CG S  + +   SSC S G         GG+   C  CGC   +C   C  SS   S  C
Sbjct: 87  CGSSCCVPVCCSSSCGSCGGSKGVCGFRGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCC 146

Query: 430 E 432
           +
Sbjct: 147 Q 147

>TNAB_PROVU (P28785) Low affinity tryptophan permease|
          Length = 417

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = -3

Query: 191 YICLMSIIRNSGGYIYSVFRFPTATVLLGTDAEVLVVYHVFTVILISSVVI*GCCAS 21
           YI + + I  +G  IY       A++L G +  +  ++ +FT+ L +++   G CAS
Sbjct: 99  YILIYAYISAAGSIIYE------ASLLYGINFNLRAIFFIFTIALGATIWWGGACAS 149


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,553,159
Number of Sequences: 219361
Number of extensions: 1119486
Number of successful extensions: 2609
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2608
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)