ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25i05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
2gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
4dbj|AK065440.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
5gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, com... 50 0.007
6gb|AE005079.1| Halobacterium sp. NRC-1 section 110 of 170 of the... 44 0.44
7gb|AC110716.6| Homo sapiens 3 BAC RP11-442N1 (Roswell Park Cance... 42 1.7
8gb|AC022616.9| Homo sapiens chromosome 8, clone RP11-726G23, com... 42 1.7
9gb|BT001713.1| Drosophila melanogaster RE67722 full insert cDNA 42 1.7
10emb|AL772287.2| Human DNA sequence from clone RP11-357L5 on chro... 42 1.7
11gb|AY115567.1| Drosophila melanogaster elbow (elB) mRNA, complet... 42 1.7
12gb|AC016826.9| Homo sapiens chromosome 10 clone RP11-570J13, com... 42 1.7
13ref|NM_205990.1| Drosophila melanogaster elbow B CG4220-RC, tran... 42 1.7
14ref|NM_176045.1| Drosophila melanogaster elbow B CG4220-RB, tran... 42 1.7
15ref|NM_078842.4| Drosophila melanogaster elbow B CG4220-RA, tran... 42 1.7
16gb|AC098575.6| Drosophila melanogaster X BAC RP98-3D13 (Roswell ... 42 1.7
17gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, r... 42 1.7
18gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, r... 42 1.7
19gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52... 42 1.7
20gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 ... 42 1.7
21ref|XM_515449.1| PREDICTED: Pan troglodytes LOC459204 (LOC459204... 40 6.9
22gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, co... 40 6.9
23ref|XM_425112.1| PREDICTED: Gallus gallus similar to hydrocephal... 40 6.9
24ref|XM_414041.1| PREDICTED: Gallus gallus similar to Ac39/physop... 40 6.9
25ref|XM_414040.1| PREDICTED: Gallus gallus similar to hydroxyster... 40 6.9
26gb|BC051338.1| Homo sapiens endothelial PAS domain protein 1, mR... 40 6.9
27gb|BC035340.1| Homo sapiens cDNA clone IMAGE:5185971, partial cds 40 6.9
28gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome... 40 6.9
29gb|AC127249.4| Mus musculus BAC clone RP24-475B8 from chromosome... 40 6.9
30gb|AY485674.1| Ovis aries endothelial PAS domain protein 1 mRNA,... 40 6.9
31gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosom... 40 6.9
32ref|XM_531807.2| PREDICTED: Canis familiaris similar to Endothel... 40 6.9
33emb|CR730947.2|CNS0GQY0 Tetraodon nigroviridis full-length cDNA 40 6.9
34gb|AC114995.7| Mus musculus chromosome 8, clone RP23-171P5, comp... 40 6.9
35emb|CR680113.2|CNS0FNQ5 Tetraodon nigroviridis full-length cDNA 40 6.9
36emb|CR676719.2|CNS0FL4B Tetraodon nigroviridis full-length cDNA 40 6.9
37emb|CR673131.2|CNS0FICX Tetraodon nigroviridis full-length cDNA 40 6.9
38gb|AC162304.4| Mus musculus chromosome 7, clone RP23-350J16, com... 40 6.9
39gb|BC051901.1| Homo sapiens retina and anterior neural fold home... 40 6.9
40emb|AL953862.4| Human DNA sequence from clone CTD-2230M5 on chro... 40 6.9
41emb|AL590369.18| Human DNA sequence from clone RP11-483H20 on ch... 40 6.9
42ref|NM_001430.3| Homo sapiens endothelial PAS domain protein 1 (... 40 6.9
43emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on ch... 40 6.9
44gb|AC092896.9| Homo sapiens 3 BAC RP11-274J15 (Roswell Park Canc... 40 6.9
45emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on ch... 40 6.9
46gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, com... 40 6.9
47gb|AC158236.2| Mus musculus BAC clone RP23-132B15 from chromosom... 40 6.9
48gb|AC140242.5| Mus musculus BAC clone RP23-290N4 from chromosome... 40 6.9
49gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Canc... 40 6.9
50gb|AF263450.1|AF148807S2 Homo sapiens dopamine D3 receptor (DRD3... 40 6.9
51gb|AC026384.19|AC026384 Mus musculus 11 BAC RP23-390D17 (Roswell... 40 6.9
52ref|NM_174725.2| Bos taurus endothelial PAS domain protein 1 (EP... 40 6.9
53gb|AC016912.7| Homo sapiens BAC clone RP11-480A6 from 2, complet... 40 6.9
54gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-24... 40 6.9
55dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.9
56emb|BX571982.6| Zebrafish DNA sequence from clone CH211-204K19 i... 40 6.9
57emb|AJ234839.1|HVU234839 Hordeum vulgare genomic DNA fragment; c... 40 6.9
58emb|AJ271348.2|HSA271348 Homo sapiens partial DRD3 gene for dopa... 40 6.9
59emb|BX469928.8| Zebrafish DNA sequence from clone DKEYP-47C5 in ... 40 6.9
60emb|BX511183.6| Zebrafish DNA sequence from clone CH211-51F18 in... 40 6.9
61gb|AF033621.1|AF033621 Homo sapiens dopamine D3 receptor (DRD3) ... 40 6.9
62gb|AC174643.3| Mus musculus BAC clone RP24-235D23 from chromosom... 40 6.9
63gb|AC102364.5| Mus musculus chromosome 9, clone RP23-106P6, comp... 40 6.9
64gb|U51626.1|HSU51626 Human MOP2 mRNA, complete cds 40 6.9
65gb|U43584.1|DVU43584 Drosophila virilis kinase suppressor of ras... 40 6.9
66gb|AC164879.2| Mus musculus BAC clone RP23-354H10 from chromosom... 40 6.9
67gb|AC164120.2| Mus musculus BAC clone RP24-289J17 from chromosom... 40 6.9
68gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complet... 40 6.9
69gb|U81984.1|HSU81984 Human endothelial PAS domain protein 1 (EPA... 40 6.9
70gb|AC170603.2| Mus musculus BAC clone RP23-140J10 from chromosom... 40 6.9
71dbj|AB018399.1| Bos taurus mRNA for endothelial PAS domain prote... 40 6.9
72dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 6.9
73emb|AL611945.21| Mouse DNA sequence from clone RP23-48A7 on chro... 40 6.9 
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
              complete sequence
          Length = 204649

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 12     aggttggcntgaagcacaacacccctatattacaacactgctaa 55
              |||||||| || |||||||||||||||| |||||||||||||||
Sbjct: 199251 aggttggcatgcagcacaacacccctatgttacaacactgctaa 199208



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295    agcttgcagctacaacatccgtcgtcgtgctggagccgaggagctggcggagcttggg 352
              |||||||||| |||||||| || | || || |||||||||||| || || ||||||||
Sbjct: 198988 agcttgcagcaacaacatcagtggccgggccggagccgaggagttgtcgaagcttggg 198931
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>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0040E06, complete sequence
          Length = 160907

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 12    aggttggcntgaagcacaacacccctatattacaacactgctaa 55
             |||||||| || |||||||||||||||| |||||||||||||||
Sbjct: 51761 aggttggcatgcagcacaacacccctatgttacaacactgctaa 51718



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 295   agcttgcagctacaacatccgtcgtcgtgctggagccgaggagctggcggagcttggg 352
             |||||||||| |||||||| || | || || |||||||||||| || || ||||||||
Sbjct: 51498 agcttgcagcaacaacatcagtggccgggccggagccgaggagttgtcgaagcttggg 51441
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 12       aggttggcntgaagcacaacacccctatattacaacactgctaa 55
                |||||||| || |||||||||||||||| |||||||||||||||
Sbjct: 28119086 aggttggcatgcagcacaacacccctatgttacaacactgctaa 28119043



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 295      agcttgcagctacaacatccgtcgtcgtgctggagccgaggagctggcggagcttggg 352
                |||||||||| |||||||| || | || || |||||||||||| || || ||||||||
Sbjct: 28118823 agcttgcagcaacaacatcagtggccgggccggagccgaggagttgtcgaagcttggg 28118766
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>dbj|AK065440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020K21, full
            insert sequence
          Length = 1853

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 12   aggttggcntgaagcacaacacccctatattacaacactgctaa 55
            |||||||| || |||||||||||||||| |||||||||||||||
Sbjct: 1659 aggttggcatgcagcacaacacccctatgttacaacactgctaa 1616



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 295  agcttgcagctacaacatccgtcgtcgtgctggagccgaggagctggcggagcttggg 352
            |||||||||| |||||||| || | || || |||||||||||| || || ||||||||
Sbjct: 1396 agcttgcagcaacaacatcagtggccgggccggagccgaggagttgtcgaagcttggg 1339
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>gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, complete sequence
          Length = 159813

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 434   ggaggaggatggagcagctgctgctgctg 462
             ||||||||| |||||||||||||||||||
Sbjct: 78482 ggaggaggacggagcagctgctgctgctg 78510
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>gb|AE005079.1| Halobacterium sp. NRC-1 section 110 of 170 of the complete genome
          Length = 12797

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 331   cgaggagctggcggagcttggg 352
             ||||||||||||||||||||||
Sbjct: 12098 cgaggagctggcggagcttggg 12119
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>gb|AC110716.6| Homo sapiens 3 BAC RP11-442N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 67856

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   atactcatcaaacaaatatac 192
             |||||||||||||||||||||
Sbjct: 21728 atactcatcaaacaaatatac 21748
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>gb|AC022616.9| Homo sapiens chromosome 8, clone RP11-726G23, complete sequence
          Length = 191821

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 441    gatggagcagctgctgctgct 461
              |||||||||||||||||||||
Sbjct: 144294 gatggagcagctgctgctgct 144314
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>gb|BT001713.1| Drosophila melanogaster RE67722 full insert cDNA
          Length = 3336

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 439  aggatggagcagctgctgctgctga 463
            |||||| ||||||||||||||||||
Sbjct: 1997 aggatgcagcagctgctgctgctga 1973
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>emb|AL772287.2| Human DNA sequence from clone RP11-357L5 on chromosome 10 Contains part
             of the CDH23 gene for cadherin related 23, complete
             sequence
          Length = 42811

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 441   gatggagcagctgctgctgct 461
             |||||||||||||||||||||
Sbjct: 20380 gatggagcagctgctgctgct 20360
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>gb|AY115567.1| Drosophila melanogaster elbow (elB) mRNA, complete cds
          Length = 2484

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 439  aggatggagcagctgctgctgctga 463
            |||||| ||||||||||||||||||
Sbjct: 1171 aggatgcagcagctgctgctgctga 1147
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>gb|AC016826.9| Homo sapiens chromosome 10 clone RP11-570J13, complete sequence
          Length = 130541

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 441   gatggagcagctgctgctgct 461
             |||||||||||||||||||||
Sbjct: 84558 gatggagcagctgctgctgct 84538
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>ref|NM_205990.1| Drosophila melanogaster elbow B CG4220-RC, transcript variant C
            (elB), mRNA
          Length = 3324

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 439  aggatggagcagctgctgctgctga 463
            |||||| ||||||||||||||||||
Sbjct: 1997 aggatgcagcagctgctgctgctga 1973
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>ref|NM_176045.1| Drosophila melanogaster elbow B CG4220-RB, transcript variant B
            (elB), mRNA
          Length = 2457

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 439  aggatggagcagctgctgctgctga 463
            |||||| ||||||||||||||||||
Sbjct: 1204 aggatgcagcagctgctgctgctga 1180
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>ref|NM_078842.4| Drosophila melanogaster elbow B CG4220-RA, transcript variant A
            (elB), mRNA
          Length = 2577

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 439  aggatggagcagctgctgctgctga 463
            |||||| ||||||||||||||||||
Sbjct: 1204 aggatgcagcagctgctgctgctga 1180
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>gb|AC098575.6| Drosophila melanogaster X BAC RP98-3D13 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 155685

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 442   atggagcagctgctgctgctg 462
             |||||||||||||||||||||
Sbjct: 38923 atggagcagctgctgctgctg 38903
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>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
              BACR37K07, complete sequence
          Length = 157722

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 439    aggatggagcagctgctgctgctga 463
              |||||| ||||||||||||||||||
Sbjct: 150232 aggatgcagcagctgctgctgctga 150256
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>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
             BACR21J17, complete sequence
          Length = 174974

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 439   aggatggagcagctgctgctgctga 463
             |||||| ||||||||||||||||||
Sbjct: 29651 aggatgcagcagctgctgctgctga 29675
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>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete
              sequence
          Length = 236144

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 439    aggatggagcagctgctgctgctga 463
              |||||| ||||||||||||||||||
Sbjct: 157575 aggatgcagcagctgctgctgctga 157599
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>gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 of 74 of the complete
             sequence
          Length = 396604

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 442   atggagcagctgctgctgctg 462
             |||||||||||||||||||||
Sbjct: 82337 atggagcagctgctgctgctg 82357
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>ref|XM_515449.1| PREDICTED: Pan troglodytes LOC459204 (LOC459204), mRNA
          Length = 3729

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 2557 tggagcagctgctgctgctg 2538
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>gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, complete sequence
          Length = 220191

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 449    agctgctgctgctgatttgt 468
              ||||||||||||||||||||
Sbjct: 152033 agctgctgctgctgatttgt 152014
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>ref|XM_425112.1| PREDICTED: Gallus gallus similar to hydrocephalus-inducing protein
            (LOC427538), mRNA
          Length = 16500

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 434  ggaggaggatggagcagctg 453
            ||||||||||||||||||||
Sbjct: 7796 ggaggaggatggagcagctg 7815
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>ref|XM_414041.1| PREDICTED: Gallus gallus similar to Ac39/physophilin (LOC415674),
            mRNA
          Length = 2023

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 439  aggatggagcagctgctgctgctg 462
            |||||||||| |||||||||||||
Sbjct: 1948 aggatggagctgctgctgctgctg 1925
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>ref|XM_414040.1| PREDICTED: Gallus gallus similar to hydroxysteroid 11-beta
            dehydrogenase 2 (LOC415673), mRNA
          Length = 1846

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 439  aggatggagcagctgctgctgctg 462
            |||||||||| |||||||||||||
Sbjct: 1499 aggatggagctgctgctgctgctg 1522
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>gb|BC051338.1| Homo sapiens endothelial PAS domain protein 1, mRNA (cDNA clone
            MGC:59860 IMAGE:6305604), complete cds
          Length = 5011

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 1756 tggagcagctgctgctgctg 1737
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>gb|BC035340.1| Homo sapiens cDNA clone IMAGE:5185971, partial cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 1214 tggagcagctgctgctgctg 1233
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>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete sequence
          Length = 225721

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 441   gatggagcagctgctgctgctgat 464
             ||||| ||||||||||||||||||
Sbjct: 10613 gatggtgcagctgctgctgctgat 10636
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>gb|AC127249.4| Mus musculus BAC clone RP24-475B8 from chromosome 18, complete sequence
          Length = 137187

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   agctgctgctgctgatttgt 468
             ||||||||||||||||||||
Sbjct: 60350 agctgctgctgctgatttgt 60331
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>gb|AY485674.1| Ovis aries endothelial PAS domain protein 1 mRNA, partial cds
          Length = 496

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 443 tggagcagctgctgctgctg 462
           ||||||||||||||||||||
Sbjct: 231 tggagcagctgctgctgctg 212
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>gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosome 8, complete sequence
          Length = 198118

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 445    gagcagctgctgctgctgatttgt 468
              |||| |||||||||||||||||||
Sbjct: 146768 gagctgctgctgctgctgatttgt 146791
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>ref|XM_531807.2| PREDICTED: Canis familiaris similar to Endothelial PAS domain protein
            1 (EPAS-1) (Member of PAS protein 2) (MOP2)
            (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2
            alpha) (HIF-1 alpha-like factor) (HLF) (LOC474578), mRNA
          Length = 3688

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 1759 tggagcagctgctgctgctg 1740
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>emb|CR730947.2|CNS0GQY0 Tetraodon nigroviridis full-length cDNA
          Length = 1280

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 443 tggagcagctgctgctgctg 462
           ||||||||||||||||||||
Sbjct: 945 tggagcagctgctgctgctg 926
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>gb|AC114995.7| Mus musculus chromosome 8, clone RP23-171P5, complete sequence
          Length = 242745

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 440    ggatggagcagctgctgctgctga 463
              ||||||||| ||||||||||||||
Sbjct: 229038 ggatggagctgctgctgctgctga 229061
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>emb|CR680113.2|CNS0FNQ5 Tetraodon nigroviridis full-length cDNA
          Length = 1275

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 443 tggagcagctgctgctgctg 462
           ||||||||||||||||||||
Sbjct: 948 tggagcagctgctgctgctg 929
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>emb|CR676719.2|CNS0FL4B Tetraodon nigroviridis full-length cDNA
          Length = 1319

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 443 tggagcagctgctgctgctg 462
           ||||||||||||||||||||
Sbjct: 981 tggagcagctgctgctgctg 962
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>emb|CR673131.2|CNS0FICX Tetraodon nigroviridis full-length cDNA
          Length = 1270

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 443 tggagcagctgctgctgctg 462
           ||||||||||||||||||||
Sbjct: 945 tggagcagctgctgctgctg 926
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>gb|AC162304.4| Mus musculus chromosome 7, clone RP23-350J16, complete sequence
          Length = 219899

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    aggggaggaggatggagcag 450
              ||||||||||||||||||||
Sbjct: 148891 aggggaggaggatggagcag 148910
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>gb|BC051901.1| Homo sapiens retina and anterior neural fold homeobox, mRNA (cDNA
            clone IMAGE:6139916), complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 432  ggggaggaggatggagcagc 451
            ||||||||||||||||||||
Sbjct: 2865 ggggaggaggatggagcagc 2884
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>emb|AL953862.4| Human DNA sequence from clone CTD-2230M5 on chromosome X Contains a
             novel pseudogene, complete sequence
          Length = 81428

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aaattacagtgaaaacatgg 78
             ||||||||||||||||||||
Sbjct: 50696 aaattacagtgaaaacatgg 50715
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>emb|AL590369.18| Human DNA sequence from clone RP11-483H20 on chromosome 9 Contains the
             5' end of a novel gene (FLJ35803), the 3' end of the gene
             for AD-003 protein (AD-003), the ASB6 gene for ankyrin
             repeat and SOCS box-containing 6 (FLJ20548), two novel
             genes, the gene for paired related homeobox protein (PRX2)
             (PMX2, PRRX2), the 3' end of the PTGES gene for
             prostaglandin E synthase (PGES, PIG12, MGST-IV, MGST1L1,
             TP53I12, MGST1-L1) and six CpG islands, complete sequence
          Length = 125756

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 439   aggatggagcagctgctgctgctg 462
             |||||| |||||||||||||||||
Sbjct: 15250 aggatgtagcagctgctgctgctg 15273
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>ref|NM_001430.3| Homo sapiens endothelial PAS domain protein 1 (EPAS1), mRNA
          Length = 5186

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 1929 tggagcagctgctgctgctg 1910
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>emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on chromosome 13 Contains the
             3' end of the ATP11A gene for ATPase Class VI type 11A,
             the 5' end of the MCF2L gene for a MCF.2 cell line derived
             transforming sequence-like gene, a novel gene and eight
             CpG islands, complete sequence
          Length = 170928

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   tggagcagctgctgctgctg 462
             ||||||||||||||||||||
Sbjct: 90703 tggagcagctgctgctgctg 90722
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>gb|AC092896.9| Homo sapiens 3 BAC RP11-274J15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170330

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    ggagttcctgattatactca 178
              ||||||||||||||||||||
Sbjct: 167816 ggagttcctgattatactca 167797
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>emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on chromosome 11 Contains a
              glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene,
              wo novel genes and a CpG island, complete sequence
          Length = 210813

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 445    gagcagctgctgctgctgatttgt 468
              |||| |||||||||||||||||||
Sbjct: 135086 gagctgctgctgctgctgatttgt 135063
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>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence
          Length = 195609

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    ggggaggaggatggagcagc 451
              ||||||||||||||||||||
Sbjct: 132901 ggggaggaggatggagcagc 132882
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>gb|AC158236.2| Mus musculus BAC clone RP23-132B15 from chromosome 8, complete sequence
          Length = 209957

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 440    ggatggagcagctgctgctgctga 463
              ||||||||| ||||||||||||||
Sbjct: 180245 ggatggagctgctgctgctgctga 180222
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>gb|AC140242.5| Mus musculus BAC clone RP23-290N4 from chromosome 8, complete sequence
          Length = 168835

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    aacacccctatattacaacactgc 52
             |||| |||||||||||||||||||
Sbjct: 64012 aacatccctatattacaacactgc 64035
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>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 161963

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 441   gatggagcagctgctgctgctgat 464
             |||||||| |||||||||||||||
Sbjct: 57406 gatggagctgctgctgctgctgat 57429
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>gb|AF263450.1|AF148807S2 Homo sapiens dopamine D3 receptor (DRD3) gene, exon 2 and partial
           cds
          Length = 1424

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 ggagttcctgattatactca 178
           ||||||||||||||||||||
Sbjct: 127 ggagttcctgattatactca 146
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>gb|AC026384.19|AC026384 Mus musculus 11 BAC RP23-390D17 (Roswell Park Cancer Institute Mouse
             BAC Library) complete sequence
          Length = 177428

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 445   gagcagctgctgctgctgatttgt 468
             |||| |||||||||||||||||||
Sbjct: 52742 gagctgctgctgctgctgatttgt 52719
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>ref|NM_174725.2| Bos taurus endothelial PAS domain protein 1 (EPAS1), mRNA
          Length = 2888

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 1711 tggagcagctgctgctgctg 1692
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>gb|AC016912.7| Homo sapiens BAC clone RP11-480A6 from 2, complete sequence
          Length = 143996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   tggagcagctgctgctgctg 462
             ||||||||||||||||||||
Sbjct: 54474 tggagcagctgctgctgctg 54455
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>gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-245A17, complete sequence
          Length = 180573

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    tggagcagctgctgctgctg 462
              ||||||||||||||||||||
Sbjct: 151907 tggagcagctgctgctgctg 151926
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     gccgaggagctggcggagct 348
               ||||||||||||||||||||
Sbjct: 1803615 gccgaggagctggcggagct 1803596
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>emb|BX571982.6| Zebrafish DNA sequence from clone CH211-204K19 in linkage group 6,
              complete sequence
          Length = 162020

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aattaaaattacagtgaaaa 73
              ||||||||||||||||||||
Sbjct: 117483 aattaaaattacagtgaaaa 117502
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>emb|AJ234839.1|HVU234839 Hordeum vulgare genomic DNA fragment; clone MWG2212
          Length = 418

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 tggagcagctgctgctgctg 462
           ||||||||||||||||||||
Sbjct: 88  tggagcagctgctgctgctg 107
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>emb|AJ271348.2|HSA271348 Homo sapiens partial DRD3 gene for dopamine D3 receptor, exon 1
          Length = 9227

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ggagttcctgattatactca 178
            ||||||||||||||||||||
Sbjct: 8675 ggagttcctgattatactca 8694
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>emb|BX469928.8| Zebrafish DNA sequence from clone DKEYP-47C5 in linkage group 22,
              complete sequence
          Length = 141594

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    tctgcgccagagaaatgcgg 284
              ||||||||||||||||||||
Sbjct: 135761 tctgcgccagagaaatgcgg 135780
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>emb|BX511183.6| Zebrafish DNA sequence from clone CH211-51F18 in linkage group 22,
              complete sequence
          Length = 179106

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    tctgcgccagagaaatgcgg 284
              ||||||||||||||||||||
Sbjct: 168359 tctgcgccagagaaatgcgg 168340
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>gb|AF033621.1|AF033621 Homo sapiens dopamine D3 receptor (DRD3) gene, 5'-flanking region
            sequence
          Length = 1815

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ggagttcctgattatactca 178
            ||||||||||||||||||||
Sbjct: 1582 ggagttcctgattatactca 1601
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>gb|AC174643.3| Mus musculus BAC clone RP24-235D23 from chromosome 8, complete sequence
          Length = 197695

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    aacacccctatattacaacactgc 52
             |||| |||||||||||||||||||
Sbjct: 80272 aacatccctatattacaacactgc 80295
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>gb|AC102364.5| Mus musculus chromosome 9, clone RP23-106P6, complete sequence
          Length = 208404

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 440    ggatggagcagctgctgctgctga 463
              ||||||||| ||||||||||||||
Sbjct: 100678 ggatggagctgctgctgctgctga 100655
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>gb|U51626.1|HSU51626 Human MOP2 mRNA, complete cds
          Length = 2730

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 1473 tggagcagctgctgctgctg 1454
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>gb|U43584.1|DVU43584 Drosophila virilis kinase suppressor of ras (ksr) gene, complete cds
          Length = 3681

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 2011 tggagcagctgctgctgctg 1992
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>gb|AC164879.2| Mus musculus BAC clone RP23-354H10 from chromosome 14, complete sequence
          Length = 210602

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 441    gatggagcagctgctgctgctgat 464
              ||||| ||||||||||||||||||
Sbjct: 155550 gatggtgcagctgctgctgctgat 155573
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>gb|AC164120.2| Mus musculus BAC clone RP24-289J17 from chromosome 14, complete
             sequence
          Length = 147050

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   agctgctgctgctgatttgt 468
             ||||||||||||||||||||
Sbjct: 99233 agctgctgctgctgatttgt 99252
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>gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complete sequence
          Length = 183468

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   agctgctgctgctgatttgt 468
             ||||||||||||||||||||
Sbjct: 27018 agctgctgctgctgatttgt 26999
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>gb|U81984.1|HSU81984 Human endothelial PAS domain protein 1 (EPAS1) mRNA, complete cds
          Length = 2818

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 1590 tggagcagctgctgctgctg 1571
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>gb|AC170603.2| Mus musculus BAC clone RP23-140J10 from chromosome 8, complete sequence
          Length = 221596

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   agctgctgctgctgatttgt 468
             ||||||||||||||||||||
Sbjct: 93125 agctgctgctgctgatttgt 93106
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>dbj|AB018399.1| Bos taurus mRNA for endothelial PAS domain protein
            1/hypoxia-inducible factor-2 alpha, complete cds
          Length = 2888

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  tggagcagctgctgctgctg 462
            ||||||||||||||||||||
Sbjct: 1711 tggagcagctgctgctgctg 1692
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>dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-513M1, complete
             sequences
          Length = 125561

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   tggagcagctgctgctgctg 462
             ||||||||||||||||||||
Sbjct: 43288 tggagcagctgctgctgctg 43269
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>emb|AL611945.21| Mouse DNA sequence from clone RP23-48A7 on chromosome 4, complete
             sequence
          Length = 163383

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   gctgctgctgctgatttgtc 469
             ||||||||||||||||||||
Sbjct: 98796 gctgctgctgctgatttgtc 98815


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,283,521
Number of Sequences: 3902068
Number of extensions: 5283521
Number of successful extensions: 124495
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124283
Number of HSP's gapped (non-prelim): 202
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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