ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25h15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY863051.1| Zea mays putative methyl-binding domain protein MBD115 mRNA, complete cds Length = 1456 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 184 gcgctgtcgggttaaacacgcttacagtcctcaaagcaaatgcg 227 |||||||| |||||| |||| ||||| | ||||||||||||||| Sbjct: 1209 gcgctgtcaggttaaccacgattacaattctcaaagcaaatgcg 1166
>gb|AY108379.1| Zea mays PCO146110 mRNA sequence Length = 762 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 184 gcgctgtcgggttaaacacgcttacagtcctcaaagcaaatgcg 227 |||||||| |||||| |||| ||||| | ||||||||||||||| Sbjct: 453 gcgctgtcaggttaaccacgattacaattctcaaagcaaatgcg 410
>ref|XM_578879.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367537), mRNA Length = 2019 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 459 catctgacttcacctccgctggaggag 485 |||||||||||||||| |||||||||| Sbjct: 1849 catctgacttcacctctgctggaggag 1823
>ref|XM_578846.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC503311), mRNA Length = 717 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 459 catctgacttcacctccgctggaggag 485 |||||||||||||||| |||||||||| Sbjct: 547 catctgacttcacctctgctggaggag 521
>ref|XM_590415.2| PREDICTED: Bos taurus similar to HEF-like protein (LOC512832), mRNA Length = 2358 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cctgccgccctgcagcacctc 132 ||||||||||||||||||||| Sbjct: 2278 cctgccgccctgcagcacctc 2298
>ref|NM_183329.3| Rattus norvegicus steroid receptor RNA activator 1 (Sra1), mRNA Length = 945 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctgaagat 538 ||||||||| ||||||||||||||| Sbjct: 662 ctcttctttgttctcctctgaagat 638
>gb|AY542868.1| Rattus norvegicus steroid receptor RNA activator mRNA, complete cds Length = 756 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctgaagat 538 ||||||||| ||||||||||||||| Sbjct: 659 ctcttctttgttctcctctgaagat 635
>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete sequence Length = 225721 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 236 tcctaagcacacagagaccaagttt 260 |||||||||||||||||||| |||| Sbjct: 98805 tcctaagcacacagagaccatgttt 98829
>gb|AC113030.5| Mus musculus chromosome 6, clone RP23-211L5, complete sequence Length = 187655 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 tgcctcttctttcttctcctctgaa 535 |||||||||||||| |||||||||| Sbjct: 97533 tgcctcttctttctcctcctctgaa 97557
>emb|Z98949.1|HS125H2 Human DNA sequence from clone CTA-125H2 on chromosome 22q11-12, complete sequence Length = 173513 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctttcttctcctctgaagatg 539 ||||||||||||||||||||| Sbjct: 162178 ctttcttctcctctgaagatg 162198
>emb|AJ310932.1|HSA310932 Homo sapiens MYO18B gene for myosin heavy chain, exons 1-44 Length = 288888 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctttcttctcctctgaagatg 539 ||||||||||||||||||||| Sbjct: 254759 ctttcttctcctctgaagatg 254779
>gb|AF326737.2| Mus musculus sclerostin (Sost) gene, complete cds; and Meox1 gene, partial sequence Length = 81806 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctct 532 ||||||||||||||||||||| Sbjct: 42312 gcctcttctttcttctcctct 42292
>gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 208135 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctct 532 ||||||||||||||||||||| Sbjct: 89376 gcctcttctttcttctcctct 89356
>gb|AY026354.1| Rattus norvegicus steroid receptor co-activator protein SRAP mRNA, complete cds Length = 893 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctgaagat 538 ||||||||| ||||||||||||||| Sbjct: 610 ctcttctttgttctcctctgaagat 586
>ref|XM_578953.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC503414), mRNA Length = 660 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 488 tctgacttcacctctgctggaggag 464
>ref|XM_346105.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367363), mRNA Length = 567 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 395 tctgacttcacctctgctggaggag 371
>ref|XM_229258.2| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2 (SPIN-2) (LOC316825), mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 545 tctgacttcacctctgctggaggag 521
>ref|XM_229431.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301934), mRNA Length = 1023 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 851 tctgacttcacctctgctggaggag 827
>ref|XM_229439.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301944), mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 545 tctgacttcacctctgctggaggag 521
>ref|XM_578935.1| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 3 (SPIN-3) (Protein DXF34) (LOC503397), mRNA Length = 627 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 542 tctgacttcacctctgctggaggag 518
>ref|XM_578908.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367582), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 533 tctgacttcacctctgctggaggag 509
>ref|XM_578907.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC503368), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 533 tctgacttcacctctgctggaggag 509
>ref|XM_229279.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301803), mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 545 tctgacttcacctctgctggaggag 521
>ref|XM_225832.3| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2 (SPIN-2) (LOC291510), mRNA Length = 2145 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 545 tctgacttcacctctgctggaggag 521
>ref|XM_225836.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC307328), mRNA Length = 729 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 557 tctgacttcacctctgctggaggag 533
>ref|XM_225786.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC291516), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 533 tctgacttcacctctgctggaggag 509
>ref|XM_578896.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367566), mRNA Length = 1455 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 719 tctgacttcacctctgctggaggag 695
>ref|XM_229292.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301816), mRNA Length = 915 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 743 tctgacttcacctctgctggaggag 719
>ref|XM_346152.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367471), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 533 tctgacttcacctctgctggaggag 509
>ref|XM_346204.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367543), mRNA Length = 675 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 503 tctgacttcacctctgctggaggag 479
>ref|XM_578880.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367539), mRNA Length = 627 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 542 tctgacttcacctctgctggaggag 518
>ref|XM_578877.1| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2 (SPIN-2) (LOC367536), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 533 tctgacttcacctctgctggaggag 509
>ref|XM_229303.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301824), mRNA Length = 1176 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 533 tctgacttcacctctgctggaggag 509
>ref|XM_346151.2| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2 (SPIN-2) (LOC367470), mRNA Length = 1200 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 440 tctgacttcacctctgctggaggag 416
>ref|XM_578863.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367462), mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 545 tctgacttcacctctgctggaggag 521
>ref|XM_229422.3| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301926), mRNA Length = 1836 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 1664 tctgacttcacctctgctggaggag 1640 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 713 tctgacttcacctctgctggaggag 689
>ref|XM_578854.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC503320), mRNA Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 287 tctgacttcacctctgctggaggag 263
>ref|XM_229476.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301966), mRNA Length = 735 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 563 tctgacttcacctctgctggaggag 539
>ref|XM_346138.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367436), mRNA Length = 462 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 290 tctgacttcacctctgctggaggag 266
>ref|XM_578829.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367387), mRNA Length = 708 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 536 tctgacttcacctctgctggaggag 512
>ref|XM_578822.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC503287), mRNA Length = 732 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 560 tctgacttcacctctgctggaggag 536
>ref|XM_229360.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301878), mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 545 tctgacttcacctctgctggaggag 521
>ref|XM_229255.3| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301786), mRNA Length = 1836 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 617 tctgacttcacctctgctggaggag 593
>ref|XM_229717.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC302140), mRNA Length = 1122 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 950 tctgacttcacctctgctggaggag 926
>ref|XM_346104.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367357), mRNA Length = 813 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 701 tctgacttcacctctgctggaggag 677
>ref|XM_578816.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367356), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 533 tctgacttcacctctgctggaggag 509
>ref|XM_229433.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301935), mRNA Length = 492 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 320 tctgacttcacctctgctggaggag 296
>ref|XM_578813.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367352), mRNA Length = 744 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 572 tctgacttcacctctgctggaggag 548
>gb|AY186604.1| Helianthus annuus TIR-NBS-LRR resistance gene candidate protein RGC1.2 gene, partial cds Length = 431 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 ttacaaatgataataatgacc 94 ||||||||||||||||||||| Sbjct: 181 ttacaaatgataataatgacc 201
>ref|XM_577508.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC502074), mRNA Length = 1641 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 1469 tctgacttcacctctgctggaggag 1445
>ref|XM_577506.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC364549), mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 545 tctgacttcacctctgctggaggag 521
>ref|XM_222167.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC288646), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggaggag 485 |||||||||||||| |||||||||| Sbjct: 533 tctgacttcacctctgctggaggag 509
>gb|BC091105.1| Rattus norvegicus cDNA clone MGC:108511 IMAGE:7381969, complete cds Length = 1747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctgaagat 538 ||||||||| ||||||||||||||| Sbjct: 1446 ctcttctttgttctcctctgaagat 1422
>gb|AF093117.1|AF093117 Homo sapiens chromosome 7qtelo BAC E3, complete sequence Length = 147216 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 atctgcctcttctttcttctc 528 ||||||||||||||||||||| Sbjct: 127518 atctgcctcttctttcttctc 127498
>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete sequence Length = 187006 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 gcctcttctttcttctcctct 532 ||||||||||||||||||||| Sbjct: 168422 gcctcttctttcttctcctct 168442
>ref|NM_102073.1| Arabidopsis thaliana unknown protein AT1G22230 mRNA, complete cds Length = 945 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 tcttctttcttctcctctga 534 |||||||||||||||||||| Sbjct: 707 tcttctttcttctcctctga 688
>ref|NM_105873.2| Arabidopsis thaliana PATL1 (PATELLIN 1); transporter AT1G72150 (PATL1) mRNA, complete cds Length = 2148 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 536 ctcttctttcttctcctctg 517
>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence Length = 179369 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 137703 cctcttctttcttctcctct 137722
>gb|AY773817.1| Arabidopsis thaliana clone pENTR221-At1g22230 hypothetical protein (At1g22230) gene, complete cds Length = 945 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 tcttctttcttctcctctga 534 |||||||||||||||||||| Sbjct: 707 tcttctttcttctcctctga 688
>gb|AC104202.13| Mus musculus chromosome 5, clone RP24-558F5, complete sequence Length = 189841 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 103220 ctcttctttcttctcctctg 103239
>ref|NM_212766.1| Danio rerio RAN binding protein 1 (ranbp1), mRNA Length = 862 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctctgaa 535 |||||||||||||| ||||||||| Sbjct: 688 gcctcttctttcttgtcctctgaa 665
>gb|AY735521.1| Arabidopsis thaliana hypothetical protein AT1G22230 mRNA, complete cds Length = 1289 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 tcttctttcttctcctctga 534 |||||||||||||||||||| Sbjct: 939 tcttctttcttctcctctga 920
>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence Length = 166568 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 115495 cctcttctttcttctcctct 115476
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 509 tctgcctcttctttcttctcctct 532 |||||||||||||||| ||||||| Sbjct: 163947 tctgcctcttctttctcctcctct 163970
>ref|NM_013665.1| Mus musculus short stature homeobox 2 (Shox2), mRNA Length = 1603 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 34 cctcttctttcttctcctct 53
>ref|NM_031405.1| Mus musculus arsenate resistance protein 2 (Ars2), mRNA Length = 2628 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctc 531 |||||||||||||||||||| Sbjct: 1022 gcctcttctttcttctcctc 1003
>gb|AC154398.6| Mus musculus chromosome 1, clone RP24-372I12, complete sequence Length = 178664 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 74282 cctcttctttcttctcctct 74263 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 74255 cctcttctttcttctcctct 74236
>ref|NM_152506.1| Homo sapiens chromosome 21 open reading frame 129 (C21orf129), mRNA Length = 2033 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aagccagcctgccgccctgc 124 |||||||||||||||||||| Sbjct: 1298 aagccagcctgccgccctgc 1279
>gb|BC067558.1| Danio rerio cDNA clone MGC:85649 IMAGE:6805750, complete cds Length = 2429 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctctgaa 535 |||||||||||||| ||||||||| Sbjct: 653 gcctcttctttcttgtcctctgaa 630
>gb|BC066831.1| Mus musculus arsenate resistance protein 2, mRNA (cDNA clone MGC:76605 IMAGE:30471339), complete cds Length = 2990 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctc 531 |||||||||||||||||||| Sbjct: 1250 gcctcttctttcttctcctc 1231
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 tctgcctcttctttcttctcctct 532 |||||||||||||||| ||||||| Sbjct: 23298 tctgcctcttctttctcctcctct 23275
>gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosome 10, complete sequence Length = 174497 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 112952 cctcttctttcttctcctct 112933
>ref|XM_813279.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506859.240) partial mRNA Length = 1575 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tttgttgcctctgccgctgg 456 |||||||||||||||||||| Sbjct: 1459 tttgttgcctctgccgctgg 1478
>gb|AC123836.4| Mus musculus BAC clone RP23-367G3 from chromosome 15, complete sequence Length = 179575 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 86443 cctcttctttcttctcctct 86424
>emb|BX936293.11| Platypus DNA sequence from clone XX-516O5, complete sequence Length = 178175 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 19369 ctcttctttcttctcctctg 19388
>emb|CR708658.2|CNS0G9R2 Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 377 ctcttctttcttctcctctg 358
>emb|CR719420.2|CNS0GI1U Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 377 ctcttctttcttctcctctg 358
>emb|CR719142.2|CNS0GHU4 Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 378 ctcttctttcttctcctctg 359
>emb|CR716150.2|CNS0GFJ6 Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 377 ctcttctttcttctcctctg 358
>emb|CR715867.2|CNS0GFBB Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 378 ctcttctttcttctcctctg 359
>emb|CR715433.2|CNS0GEZ9 Tetraodon nigroviridis full-length cDNA Length = 414 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 255 ctcttctttcttctcctctg 236
>emb|CR714475.2|CNS0GE8N Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 378 ctcttctttcttctcctctg 359
>emb|CR714006.2|CNS0GDVM Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 377 ctcttctttcttctcctctg 358
>emb|CR710770.2|CNS0GBDQ Tetraodon nigroviridis full-length cDNA Length = 549 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 390 ctcttctttcttctcctctg 371
>emb|CR710514.2|CNS0GB6M Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 377 ctcttctttcttctcctctg 358
>emb|CR710325.2|CNS0GB1D Tetraodon nigroviridis full-length cDNA Length = 539 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 380 ctcttctttcttctcctctg 361
>emb|CR705895.2|CNS0G7MB Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 378 ctcttctttcttctcctctg 359
>emb|CR706408.2|CNS0G80K Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 378 ctcttctttcttctcctctg 359
>emb|CR704833.2|CNS0G6ST Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 377 ctcttctttcttctcctctg 358
>emb|CR701447.2|CNS0G46R Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 377 ctcttctttcttctcctctg 358
>gb|AC160958.2| Mus musculus BAC clone RP24-224I13 from chromosome 13, complete sequence Length = 178784 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 tctgcctcttctttcttctc 528 |||||||||||||||||||| Sbjct: 175316 tctgcctcttctttcttctc 175297
>emb|CR388061.11| Zebrafish DNA sequence from clone DKEY-69P22 in linkage group 5, complete sequence Length = 122069 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 gcctcttctttcttctcctctgaa 535 |||||||||||||| ||||||||| Sbjct: 105561 gcctcttctttcttgtcctctgaa 105584
>emb|Z93021.2|HS516C23 Human DNA sequence from clone RP3-516C23 on chromosome 6q12 Contains the 5' end of the KHDRBS2 gene for KH domain containing RNA binding signal transduction associated protein 2, complete sequence Length = 116685 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 atctgcctcttctttcttct 527 |||||||||||||||||||| Sbjct: 23158 atctgcctcttctttcttct 23177
>emb|AL592285.7| Human DNA sequence from clone RP11-153I22 on chromosome 1 Contains part of the PDE4B gene for phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila), complete sequence Length = 152113 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttacaaatgataataatgac 93 |||||||||||||||||||| Sbjct: 38256 ttacaaatgataataatgac 38275
>gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174974 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 atctgcctcttctttcttctcctc 531 ||||||||||||||||||| |||| Sbjct: 3815 atctgcctcttctttcttcccctc 3792
>emb|Z47378.1|OCNFPROTM O.cuniculus mRNA for neurofilament protein M Length = 2428 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 tctgcctcttctttcttctcctct 532 ||||||||||||| |||||||||| Sbjct: 841 tctgcctcttcttccttctcctct 818
>ref|XM_775345.1| PREDICTED: Strongylocentrotus purpuratus similar to formin 2 (LOC574937), mRNA Length = 3582 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 876 cctcttctttcttctcctct 857
>gb|AY113865.1| Arabidopsis thaliana putative cytosolic factor protein (At1g72150) mRNA, complete cds Length = 1753 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 438 ctcttctttcttctcctctg 419
>gb|AY045913.1| Arabidopsis thaliana putative cytosolic factor (At1g72150) mRNA, complete cds Length = 2024 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 485 ctcttctttcttctcctctg 466
>emb|AL731861.9| Zebrafish DNA sequence from clone BUSM1-46I22 in linkage group 19, complete sequence Length = 87662 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aagttacaaatgataataat 90 |||||||||||||||||||| Sbjct: 64162 aagttacaaatgataataat 64143
>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence Length = 228402 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 509 tctgcctcttctttcttctcctct 532 |||||||||||||||| ||||||| Sbjct: 108377 tctgcctcttctttctcctcctct 108400
>gb|AC156939.5| Mus musculus BAC clone RP23-136O24 from chromosome 12, complete sequence Length = 218561 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 137293 cctcttctttcttctcctct 137312
>ref|NM_001002101.1| Danio rerio zgc:86895 (zgc:86895), mRNA Length = 930 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 533 cctcttctttcttctcctct 514
>gb|AC034239.5| Homo sapiens chromosome 5 clone CTD-2325A5, complete sequence Length = 93381 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 tgcctcttctttcttctcct 530 |||||||||||||||||||| Sbjct: 45814 tgcctcttctttcttctcct 45833
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 tcttctttcttctcctctgaagat 538 ||||||||||| |||||||||||| Sbjct: 4481342 tcttctttcttttcctctgaagat 4481319
>dbj|AK057397.1| Homo sapiens cDNA FLJ32835 fis, clone TESTI2003255 Length = 2033 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aagccagcctgccgccctgc 124 |||||||||||||||||||| Sbjct: 1298 aagccagcctgccgccctgc 1279
>gb|AC084365.16| Homo sapiens 12 BAC RP11-632B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188629 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 tcttctttcttctcctctga 534 |||||||||||||||||||| Sbjct: 166817 tcttctttcttctcctctga 166798
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 1374502 cctcttctttcttctcctct 1374521 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 1374143 cctcttctttcttctcctct 1374162
>dbj|AK144300.1| Mus musculus 13 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630012F19 product:Arsenite-resistance protein 2, full insert sequence Length = 2990 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctc 531 |||||||||||||||||||| Sbjct: 1282 gcctcttctttcttctcctc 1263
>ref|XM_694421.1| PREDICTED: Danio rerio similar to Ran binding protein 1 (LOC573843), mRNA Length = 2514 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctctgaa 535 |||||||||||||| ||||||||| Sbjct: 753 gcctcttctttcttgtcctctgaa 730
>gb|AY060558.1| Arabidopsis thaliana At1g72150/T9N14_1 mRNA sequence Length = 2049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 535 ctcttctttcttctcctctg 516
>gb|AF364085.1|AF364085 Danio rerio Ran binding protein 1 mRNA, complete cds Length = 862 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 gcctcttctttcttctcctctgaa 535 |||||||||||||| ||||||||| Sbjct: 688 gcctcttctttcttgtcctctgaa 665
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207673 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ttctcctctgaagatgctgg 543 |||||||||||||||||||| Sbjct: 10478 ttctcctctgaagatgctgg 10497
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete cds; ASR2 (Asr2) gene, complete cds, alternatively spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2 (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2 (Tfr2) gene, partial cds Length = 296820 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 gcctcttctttcttctcctc 531 |||||||||||||||||||| Sbjct: 19040 gcctcttctttcttctcctc 19059
>gb|AC152504.2| Pan troglodytes BAC clone RP43-147M24 from chromosome 7, complete sequence Length = 178619 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 atctgcctcttctttcttct 527 |||||||||||||||||||| Sbjct: 58764 atctgcctcttctttcttct 58745
>gb|AC067754.6|AC067754 Arabidopsis thaliana chromosome 1 BAC T9N14 genomic sequence, complete sequence Length = 98874 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ctcttctttcttctcctctg 533 |||||||||||||||||||| Sbjct: 12940 ctcttctttcttctcctctg 12921
>ref|XM_229238.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301772), mRNA Length = 717 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggagga 484 |||||||||||||| ||||||||| Sbjct: 545 tctgacttcacctctgctggagga 522
>ref|XM_222132.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC288640), mRNA Length = 1143 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggagga 484 |||||||||||||| ||||||||| Sbjct: 479 tctgacttcacctctgctggagga 456
>ref|XM_578815.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367355), mRNA Length = 717 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 tctgacttcacctccgctggagga 484 |||||||||||||| ||||||||| Sbjct: 545 tctgacttcacctctgctggagga 522
>gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 36030 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 tcttctttcttctcctctga 534 |||||||||||||||||||| Sbjct: 9485 tcttctttcttctcctctga 9504
>dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09, map 22, complete sequences Length = 201997 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aagccagcctgccgccctgc 124 |||||||||||||||||||| Sbjct: 125313 aagccagcctgccgccctgc 125332
>gb|AY929853.1| Danio rerio troponin 1 mRNA, complete cds Length = 754 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 532 cctcttctttcttctcctct 513
>gb|AC005780.1|AC005780 Homo sapiens chromosome 19, cosmid F23049, complete sequence Length = 42393 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 gagcatctgacttcacctcc 475 |||||||||||||||||||| Sbjct: 34993 gagcatctgacttcacctcc 35012
>gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence Length = 100258 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 tcttctttcttctcctctga 534 |||||||||||||||||||| Sbjct: 69867 tcttctttcttctcctctga 69848
>gb|BC071518.1| Danio rerio zgc:86895, mRNA (cDNA clone MGC:86895 IMAGE:6904872), complete cds Length = 930 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 533 cctcttctttcttctcctct 514
>emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13, complete sequence Length = 121251 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagttacaaatgataataat 90 |||||||||||||||||||| Sbjct: 118469 aagttacaaatgataataat 118488
>dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, section 87/105 Length = 219256 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aagccagcctgccgccctgc 124 |||||||||||||||||||| Sbjct: 125895 aagccagcctgccgccctgc 125914
>gb|AC123709.9| Mus musculus chromosome 13, clone RP23-375O18, complete sequence Length = 99670 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 tctgcctcttctttcttctc 528 |||||||||||||||||||| Sbjct: 97254 tctgcctcttctttcttctc 97273
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tgccgccctgcagcacctcg 133 |||||||||||||||||||| Sbjct: 922648 tgccgccctgcagcacctcg 922667
>gb|U66918.1|MMU66918 Mus musculus OG-12a homeodomain protein (OG-12) mRNA, complete cds Length = 1603 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 34 cctcttctttcttctcctct 53
>gb|AC163645.5| Mus musculus BAC clone RP23-206F16 from chromosome 10, complete sequence Length = 212773 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 8620 cctcttctttcttctcctct 8601
>gb|AC144921.12| Mus musculus chromosome 1, clone RP24-214P19, complete sequence Length = 188960 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 164195 cctcttctttcttctcctct 164176 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 164168 cctcttctttcttctcctct 164149
>gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complete sequence Length = 164951 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 gcctcttctttcttctcctc 531 |||||||||||||||||||| Sbjct: 27696 gcctcttctttcttctcctc 27715
>gb|AC002350.1|AC002350 Homo sapiens 12q24 PAC RPCI3-424M6 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 167217 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 atctgcctcttctttcttctcctc 531 ||||||||||||||||||| |||| Sbjct: 163909 atctgcctcttctttcttcccctc 163886
>gb|AC122870.4| Mus musculus BAC clone RP23-103D17 from 3, complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 85746 cctcttctttcttctcctct 85765
>emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on chromosome X, complete sequence Length = 214016 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 94746 cctcttctttcttctcctct 94727
>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete sequence Length = 243114 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 191363 cctcttctttcttctcctct 191382
>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b, complete sequence Length = 45450 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gagaagagaagcctacaatt 179 |||||||||||||||||||| Sbjct: 6331 gagaagagaagcctacaatt 6312
>dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26E16, TM0103, complete sequence Length = 100595 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gagaagagaagcctacaatt 179 |||||||||||||||||||| Sbjct: 51036 gagaagagaagcctacaatt 51017
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttctcctctgaagatgctgg 543 |||||||||||||||||||| Sbjct: 91221 ttctcctctgaagatgctgg 91202
>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete sequence Length = 204206 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ttctttcttctcctctgaag 536 |||||||||||||||||||| Sbjct: 115224 ttctttcttctcctctgaag 115243
>dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:KB657H6, MX1-D21S171 region, complete sequence Length = 124516 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aagccagcctgccgccctgc 124 |||||||||||||||||||| Sbjct: 65967 aagccagcctgccgccctgc 65986
>emb|AL844594.4| Mouse DNA sequence from clone RP23-260P5 on chromosome X, complete sequence Length = 82772 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 cctcttctttcttctcctct 532 |||||||||||||||||||| Sbjct: 5260 cctcttctttcttctcctct 5279 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,095,763 Number of Sequences: 3902068 Number of extensions: 5095763 Number of successful extensions: 130331 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130032 Number of HSP's gapped (non-prelim): 299 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
