ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25h14 |
|---|---|
| Clone Library Name | barley_pub |
>ASNS_ASPOF (P31752) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (AS) Length = 589 Score = 144 bits (364), Expect = 7e-35 Identities = 73/101 (72%), Positives = 82/101 (81%), Gaps = 6/101 (5%) Frame = -1 Query: 426 TTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVH 247 TTKEAY YRMIFERFFPQNSA TVPGGPS+ACSTAKA+EWDARWS NLDPSGRAALGVH Sbjct: 490 TTKEAYYYRMIFERFFPQNSARFTVPGGPSIACSTAKAIEWDARWSNNLDPSGRAALGVH 549 Query: 246 LSAYEQEHLPATIMAG------TSKKPRMIKVAAPGVAIES 142 SAY+ LP++I AG T+KKPR++ VA PGV I + Sbjct: 550 DSAYDPP-LPSSISAGKGAAMITNKKPRIVDVATPGVVIST 589
>ASNS1_PEA (P19251) Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 585 Score = 129 bits (324), Expect = 3e-30 Identities = 66/94 (70%), Positives = 72/94 (76%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHL 244 TKEAY YRMIFERFFPQNSA LTVPGGPSVACST KA+EWDA WS NLDPSGRAALGVH+ Sbjct: 492 TKEAYYYRMIFERFFPQNSARLTVPGGPSVACSTEKAIEWDASWSNNLDPSGRAALGVHV 551 Query: 243 SAYEQEHLPATIMAGTSKKPRMIKVAAPGVAIES 142 SAYE + P T K I V+ GVAI++ Sbjct: 552 SAYEHQINPVTKGVEPEKIIPKIGVSPLGVAIQT 585
>ASNS1_LOTJA (P49092) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 585 Score = 124 bits (311), Expect = 9e-29 Identities = 67/96 (69%), Positives = 74/96 (77%), Gaps = 2/96 (2%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHL 244 TKEAY YRMIFERFFPQNSA LTVPGGP+VACSTAKAVEWDA WS NLDPSGRAALGVHL Sbjct: 491 TKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHL 550 Query: 243 SAYEQEHLPATIMAGTSKKPRMIKVAAP--GVAIES 142 SAY+ + I + ++I + AP GVAI S Sbjct: 551 SAYDDKQ-NNLINNKPVEFEKLIPMEAPSLGVAIHS 585
>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 583 Score = 122 bits (307), Expect = 3e-28 Identities = 63/96 (65%), Positives = 73/96 (76%), Gaps = 2/96 (2%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHL 244 TKEAY YRMIFERFFPQNSA LTVPGG +VACSTAKAVEWDA WS N+DPSGRAA+GVHL Sbjct: 491 TKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHL 550 Query: 243 SAYEQEHLPATI--MAGTSKKPRMIKVAAPGVAIES 142 SAY+ +++ TI + P M+ GV I+S Sbjct: 551 SAYDGKNVALTIPPLKAIDNMPMMM---GQGVVIQS 583
>ASNS2_PEA (P19252) Asparagine synthetase, root [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 582 Score = 121 bits (304), Expect = 6e-28 Identities = 58/67 (86%), Positives = 60/67 (89%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHL 244 TKEAY YRMIFERFFPQNSA LTVPGGP+VACSTAKAVEWDA WS NLDPSGRAALGVH Sbjct: 491 TKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHD 550 Query: 243 SAYEQEH 223 SAYE + Sbjct: 551 SAYENHN 557
>ASNS_BRAOL (P49091) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 118 bits (296), Expect = 5e-27 Identities = 55/64 (85%), Positives = 59/64 (92%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHL 244 TKEAY YRMIFERFFPQNSA LTVPGG +VACSTAKAVEWDA WS N+DPSGRAA+GVHL Sbjct: 492 TKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHL 551 Query: 243 SAYE 232 SAY+ Sbjct: 552 SAYD 555
>ASNS2_LOTJA (P49093) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 585 Score = 117 bits (292), Expect = 2e-26 Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 3/97 (3%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHL 244 TKEAY YRMIFERFFPQNSA L+VPGG S+ACST KA+EWDA WS NLDPSGRAALGVH Sbjct: 491 TKEAYYYRMIFERFFPQNSARLSVPGGASIACSTEKAIEWDAAWSNNLDPSGRAALGVHD 550 Query: 243 SAYEQEHLPATIMAGTSKK---PRMIKVAAPGVAIES 142 SAY+ + L ++ G + P+M +V+ GVAI S Sbjct: 551 SAYD-DQLNKSVSKGVEPEKIIPKM-EVSPLGVAILS 585
>ASNS_TRIVS (O24661) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 115 bits (287), Expect = 6e-26 Identities = 61/87 (70%), Positives = 64/87 (73%) Frame = -1 Query: 426 TTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVH 247 TTKE Y YRMIFERFFPQNSA LTVPGGPSVACSTA AV WDA WS NLDPSGRAA GVH Sbjct: 490 TTKEGYYYRMIFERFFPQNSAKLTVPGGPSVACSTATAVAWDASWSKNLDPSGRAATGVH 549 Query: 246 LSAYEQEHLPATIMAGTSKKPRMIKVA 166 AYE H+P G K +M V+ Sbjct: 550 DLAYE-NHVP----IGNLKSKKMDSVS 571
>ASNS_ORYSA (Q43011) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 590 Score = 114 bits (285), Expect = 1e-25 Identities = 54/64 (84%), Positives = 58/64 (90%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHL 244 TKEAY YR IFE+FFP+N+A LTVPGGPSVACSTAKAVEWDA WS NLDPSGRAALGVH Sbjct: 491 TKEAYYYRTIFEKFFPKNAARLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHD 550 Query: 243 SAYE 232 +AYE Sbjct: 551 AAYE 554
>ASNB_ECOLI (P22106) Asparagine synthetase B [glutamine-hydrolyzing] (EC| 6.3.5.4) Length = 553 Score = 82.0 bits (201), Expect = 5e-16 Identities = 42/65 (64%), Positives = 48/65 (73%) Frame = -1 Query: 426 TTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVH 247 T+KEAY YR IFE FP SA VPGGPSVACS+AKA+EWD + DPSGR A+GVH Sbjct: 490 TSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGR-AVGVH 548 Query: 246 LSAYE 232 SAY+ Sbjct: 549 QSAYK 553
>ASNS_MAIZE (P49094) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 77.0 bits (188), Expect = 2e-14 Identities = 35/52 (67%), Positives = 40/52 (76%) Frame = -1 Query: 420 KEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 265 KEAY YRMIFER FPQ+SA TVP GPS+ACST A+EW +W + DPSGR Sbjct: 492 KEAYYYRMIFERLFPQDSARETVPWGPSIACSTPAAIEWVEQWKASNDPSGR 543
>ASNS_SANAU (O24338) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 524 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = -1 Query: 426 TTKEAYCYRMIFERFFPQ 373 TTKEAY YRMIFERFFPQ Sbjct: 490 TTKEAYYYRMIFERFFPQ 507
>ASNS2_YEAST (P49090) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 571 Score = 37.0 bits (84), Expect = 0.020 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -1 Query: 426 TTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEW--DARWSGNLDPSGRAA 259 TTKEAY YR+ F+ +FPQ +A TV + W A W DPSGR A Sbjct: 518 TTKEAYWYRLKFDAWFPQKTAADTV-------------MRWIPKADWGCAEDPSGRYA 562
>ASNS_SCHPO (P78753) Probable asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 556 Score = 33.9 bits (76), Expect = 0.17 Identities = 22/63 (34%), Positives = 29/63 (46%) Frame = -1 Query: 426 TTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVH 247 TTKEA+ YR +F+ FP+ A + P A W DPSGR G H Sbjct: 505 TTKEAFWYRKLFDEIFPRQCADTVMRWVPK------------AEWGCPEDPSGRYQAG-H 551 Query: 246 LSA 238 ++A Sbjct: 552 VAA 554
>ASNS1_YEAST (P49089) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 571 Score = 33.5 bits (75), Expect = 0.22 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -1 Query: 426 TTKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEW--DARWSGNLDPSGRAA 259 TTKEA+ YR+ F+ FPQ + TV + W A W DPSGR A Sbjct: 519 TTKEAFWYRLKFDALFPQKTVADTV-------------MRWIPKADWGCAEDPSGRYA 563
>ASNS_MOUSE (Q61024) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 32.0 bits (71), Expect = 0.64 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 265 TKE Y YR IFER +P + LT W +W DPS R Sbjct: 511 TKEGYFYRQIFERHYPGRADWLT--------------HYWMPKWINATDPSAR 549
>ASNS_CRIGR (P19891) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 32.0 bits (71), Expect = 0.64 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 265 TKE Y YR IFER +P + LT W +W DPS R Sbjct: 511 TKEGYYYRQIFERHYPGRADWLT--------------HYWMPKWINATDPSAR 549
>ASNS_CHICK (Q5ZJU3) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 31.6 bits (70), Expect = 0.83 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 265 TKE+Y YR IFE+ +P S+ L W RW DPS R Sbjct: 511 TKESYYYRQIFEKHYPGRSSWL--------------PHYWMPRWVEATDPSAR 549
>SIX3_CHICK (O42406) Homeobox protein SIX3 (Sine oculis homeobox homolog 3)| (CSIX3) Length = 314 Score = 30.8 bits (68), Expect = 1.4 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Frame = -3 Query: 379 PPELGN-------PDSARRAKRRMQHGEGSRVGCSVVGEPGSLRESSTWSPSLGL*AGAS 221 P ++GN D A AK R+QH + G + EPG SS SPS AS Sbjct: 229 PTQVGNWFKNRRQRDRAAAAKNRLQHQAIGQSGMRSLAEPGCPTHSSAESPS----TAAS 284 Query: 220 PSNHHGRNQQEAE 182 P+ + AE Sbjct: 285 PTTSVSSLTERAE 297
>POLG_RHDVF (P27410) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 30.4 bits (67), Expect = 1.9 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 321 PCCMRRLARLALSGLPSSGGRTSQISSCN 407 PCC+R RLA P G+ + +CN Sbjct: 33 PCCIRATGRLAWPVFPGQNGKEGPLETCN 61
>POLG_RHDV3 (P27411) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 30.4 bits (67), Expect = 1.9 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 321 PCCMRRLARLALSGLPSSGGRTSQISSCN 407 PCC+R RLA P G+ + +CN Sbjct: 33 PCCIRATGRLAWPVFPGQNGKEGPLETCN 61
>ASNS_RAT (P49088) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 30.0 bits (66), Expect = 2.4 Identities = 18/53 (33%), Positives = 21/53 (39%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 265 TKE Y YR IFE +P + LT W +W DPS R Sbjct: 511 TKEGYYYRQIFEHHYPGRADWLT--------------HYWMPKWINATDPSAR 549
>ASNS_PONPY (Q5R6W9) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/53 (32%), Positives = 22/53 (41%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 265 TKE Y YR +FER +P + L + W +W DPS R Sbjct: 511 TKEGYYYRQVFERHYPGRADWL--------------SHYWMPKWINATDPSAR 549
>ASNS_MESAU (P17714) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 30.0 bits (66), Expect = 2.4 Identities = 18/53 (33%), Positives = 21/53 (39%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 265 TKE Y YR IFE +P + LT W +W DPS R Sbjct: 511 TKEGYFYRQIFEHHYPGRADWLT--------------HYWMPKWINATDPSAR 549
>ASNS_HUMAN (P08243) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) (Cell cycle control protein TS11) Length = 560 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/53 (32%), Positives = 22/53 (41%) Frame = -1 Query: 423 TKEAYCYRMIFERFFPQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 265 TKE Y YR +FER +P + L + W +W DPS R Sbjct: 511 TKEGYYYRQVFERHYPGRADWL--------------SHYWMPKWINATDPSAR 549
>FUT7_HUMAN (Q11130) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 7) (FUCT-VII) (Selectin-ligand synthase) Length = 342 Score = 30.0 bits (66), Expect = 2.4 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +3 Query: 186 ASCWFLP*WLLGDAPAHRPRDGLQVLLSLRDPGSPTTEHPTLLPSPCCMR-RLARLALS 359 A+ W L WLLG AP P Q +++ P T+ P LPS C R +AR LS Sbjct: 25 AALWLL--WLLGSAPRGTPAP--QPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLS 79
>DNLJ_MYCLE (O33102) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 694 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 216 LGDAPAHRPRDGLQVLLSLRDPGSPTTEHPTLL 314 LG RP Q L+LRD G P +EH TL+ Sbjct: 238 LGHIEGFRPATQHQAYLALRDWGLPVSEHTTLV 270
>GLYA_GLUOX (Q5FNK4) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 434 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Frame = -1 Query: 315 AVEWDARWSGNLDPSGRAALGV----HLSAYEQEHLPATIMAGTSKKPRMIKVA 166 A + +W ++ RA G+ + A +EH P I+AG+S PR+I A Sbjct: 142 APNYSGKWFNSVQYGVRAEDGLIDYDQMEALAREHKPKIIVAGSSAYPRVIDFA 195
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = -3 Query: 376 PELGNPDSARRAKRRMQHGEGSRVGCSVVGEPGSLRESSTWSPSLGL*AGASPSNHHG 203 P L P S + R++ G+ + P S ++ SPSLG GA SN HG Sbjct: 1183 PSLAAPSSPSLSHRQVMGPLGTGFHGNTGSSPQSSAATTPGSPSLGRHPGAQVSNLHG 1240
>POLG_RHDVB (Q89273) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 29.3 bits (64), Expect = 4.1 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +3 Query: 321 PCCMRRLARLALSGLPSSGGRTSQISSCN 407 PCC+R +LA P G+ + +CN Sbjct: 33 PCCIRATGKLAWPVFPGQNGKEGPLKTCN 61
>PSD2_PEA (P81930) Defense-related peptide 2 (Defensin-2) (Antifungal protein| Psd2) Length = 47 Score = 29.3 bits (64), Expect = 4.1 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +1 Query: 148 NCDTRCRNLDHPRLLAGSCHDG--CW 219 NC+ CRN +H LL+G C D CW Sbjct: 19 NCNKHCRNNEH--LLSGRCRDDFRCW 42
>10KD_VIGUN (P18646) 10 kDa protein precursor (Clone PSAS10)| Length = 75 Score = 29.3 bits (64), Expect = 4.1 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Frame = +1 Query: 139 STLNCDTRCRNLDHPRLLAGSCHDG--CW 219 +T +CD C+N +H LL+G C D CW Sbjct: 44 TTGSCDDHCKNKEH--LLSGRCRDDVRCW 70
>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 656 Score = 28.9 bits (63), Expect = 5.4 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = -3 Query: 364 NPDSARRAKRRMQHGEGSRVGCSVVGEPGSLRESSTWSPSLGL*AGASPSNHHGRNQQEA 185 +PD RRA G G+ VG + S +SS P + A+PS HH + QQ+ Sbjct: 115 DPDLQRRA------GSGTGVGAMLARGSASPHKSSP-QPLV-----ATPSQHHQQQQQQI 162 Query: 184 E-DDQGCGTW--CRN*ELMVSCPACR 116 + + CG CR E C CR Sbjct: 163 KRSARMCGECEACRRTEDCGHCDFCR 188
>RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (Drosha) (p241)| Length = 1374 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Frame = -3 Query: 355 SARRAKRRMQHGEGSRVGCSVVGEPGS---------LRESSTWSPSLGL*AGASPSNHHG 203 S R+ ++ G G SVV EP ++ + +W+P L + SPS Sbjct: 302 SLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREKK 361 Query: 202 RNQQEAEDDQ 173 R + E E D+ Sbjct: 362 RARWEEEKDR 371
>LUXS_STRPY (P0C0C7) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 215 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 84 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP8 (P0A3P9) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 215 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 84 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP6 (Q5XAN3) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 215 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 84 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP3 (P0A3P8) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 215 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 84 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP1 (P0C0C8) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 215 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 84 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>FOXH1_XENLA (P70056) Forkhead box protein H1 (Forkhead activin signal| transducer 1) (Fast-1) (xFAST-1) Length = 518 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = -3 Query: 271 RESSTWSPSLGL*AGASPSNHHG 203 RE TWSP G G SP H G Sbjct: 62 REGGTWSPDRGSMYGLSPGTHEG 84
>ISP5_SCHPO (P40901) Sexual differentiation process putative amino-acid| permease isp5 Length = 580 Score = 28.9 bits (63), Expect = 5.4 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 421 KRGLLLQDDI*EVLPPELGNPDSARR---AKRRMQHGEGSRVGCSV-VGEPGSLRESSTW 254 +RG L Q LPPE G P +R A+ G G +G V VG +LRE Sbjct: 56 ERGNLFQRWYRSFLPPEDGKPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAA 115 Query: 253 S 251 S Sbjct: 116 S 116
>ATP6_PYLLI (Q37601) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 248 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +2 Query: 131 GHHQLSIATPGAATLIILGFLLVPAMMVA 217 G H LS+ PG T I+L FLLVP +V+ Sbjct: 137 GFHMLSLFLPG-GTSIVLAFLLVPIEIVS 164
>D108B_PANTR (Q5IAA6) Beta-defensin 108B precursor (Defensin, beta 108B)| (Defensin, beta 108) (Beta-defensin 8) (DEFB-8) (BD-8) (cBD-8) (Fragment) Length = 53 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +1 Query: 196 GSCHDGCWEMLLLIGREMDSK-CCSP*GIQ 282 GSC D C E + +GR ++S+ CC P G Q Sbjct: 13 GSCRDFCLETEIHVGRCLNSRPCCLPLGHQ 42
>CJ111_HUMAN (Q8N326) Protein C10orf111| Length = 155 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = -1 Query: 291 SGNLDPSGRAALGVHL-SAYEQEHLPATIMAGTSKKPRM 178 +GNL+P R A+ V L SA +++P+++ G SK+ R+ Sbjct: 31 AGNLEPEKRKAVRVALSSATAAQNIPSSVHCGCSKQWRL 69
>AMPA_CAUCR (Q9A7M9) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 493 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -1 Query: 333 ACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTSKKPRMIKVAA 163 A T+ VE + + + + RAA G L+AY + T A +++K+AA Sbjct: 99 AVKTSGVVELVLKLGADAETAARAAFGARLAAYRFDKYRTTEKAEKKPSVQVVKIAA 155
>MFGM_RAT (P70490) Lactadherin precursor (Milk fat globule-EGF factor 8)| (MFG-E8) (O-acetyl GD3 ganglioside synthase) (AGS) (MFGM) Length = 427 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/55 (30%), Positives = 23/55 (41%) Frame = +1 Query: 118 GKQDRTPSTLNCDTRCRNLDHPRLLAGSCHDGCWEMLLLIGREMDSKCCSP*GIQ 282 G QD +N + RL SCH GC L+G E+ C P G++ Sbjct: 226 GNQDNNSLKINMFNPTLEAQYIRLYPVSCHRGCTLRFELLGCELHG-CSEPLGLK 279
>D108B_HUMAN (Q8NET1) Beta-defensin 108B precursor (Defensin, beta 108B)| (Defensin, beta 108) (Beta-defensin 8) (DEFB-8) (BD-8) (hBD-8) Length = 73 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +1 Query: 196 GSCHDGCWEMLLLIGREMDSK-CCSP*GIQ 282 GSC D C E + +GR ++S+ CC P G Q Sbjct: 33 GSCRDFCLETEIHVGRCLNSQPCCLPLGHQ 62
>GELS_DROME (Q07171) Gelsolin precursor| Length = 798 Score = 28.1 bits (61), Expect = 9.2 Identities = 20/72 (27%), Positives = 29/72 (40%) Frame = +2 Query: 161 GAATLIILGFLLVPAMMVAGRCSCS*AERWTPSAALPEGSRFPDHRASHSTAFAVLHATL 340 GAAT+ +L LLV + + CS P+ + G P + S A V+H + Sbjct: 5 GAATMAVLSSLLVFLALSSSLCSAG-TLNARPAFPVQSGEIQPSGQNSKQAARRVMHPSF 63 Query: 341 GPPGTVRIAEFW 376 G E W Sbjct: 64 ANAGRTPGLEIW 75
>MURD_NITEU (Q82VS5) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 471 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Frame = -1 Query: 405 YRMIFERFFPQNSAILTVPGG------PSVACSTAKAVEWDARWSGNLDPSGRAALGVHL 244 + + +++ P + IL + G S+ K WD +GN+ P+ AL + Sbjct: 101 FAVALDQYAPPGTKILAITGSNGKTTVTSMVGEMVKNAGWDVEVAGNIGPAALDALMQRM 160 Query: 243 SAYEQEHL 220 A + HL Sbjct: 161 DANKWPHL 168
>JHD2B_HUMAN (Q7LBC6) JmjC domain-containing histone demethylation protein 2B| (EC 1.14.11.-) (Jumonji domain-containing protein 1B) (Nuclear protein 5qNCA) Length = 1761 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = -3 Query: 382 LPPELGNPDSARRAKRRMQHGEGSRVGCSVV----GEPGSLRESSTWSPSLGL*AGASPS 215 L PE+G ++ K Q G+G +VV P ++R S T GL AG P Sbjct: 394 LAPEVGGAENKEAGKTLEQVGQGIVASAAVVTTASSTPNTVRISDT-----GLAAGTVPE 448 Query: 214 NHHGRNQQEAEDD 176 G Q + ++ Sbjct: 449 KQKGSRSQASGEN 461
>EMR2_HUMAN (Q9UHX3) EGF-like module-containing mucin-like hormone| receptor-like 2 precursor (EGF-like module EMR2) (CD312 antigen) Length = 823 Score = 28.1 bits (61), Expect = 9.2 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -3 Query: 190 EAEDDQGCGTWCRN*ELMVSCPACR 116 E +D +GC WC V+ ACR Sbjct: 22 ETQDSRGCARWCPQDSSCVNATACR 46
>CD97_HUMAN (P48960) CD97 antigen precursor (Leukocyte antigen CD97)| Length = 835 Score = 28.1 bits (61), Expect = 9.2 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -3 Query: 190 EAEDDQGCGTWCRN*ELMVSCPACR 116 E +D +GC WC V+ ACR Sbjct: 19 ETQDSRGCARWCPQNSSCVNATACR 43 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,336,978 Number of Sequences: 219361 Number of extensions: 1505238 Number of successful extensions: 4984 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 4810 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4983 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
