ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25h06 |
|---|---|
| Clone Library Name | barley_pub |
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 32.7 bits (73), Expect = 0.56 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -3 Query: 452 EPYAYPPAMPVPNVGLGMPYQAPPMT 375 +PYA+PP P P G+ +PY PP T Sbjct: 2201 DPYAHPPGTPRP--GISVPYSQPPAT 2224
>DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)| Length = 870 Score = 32.3 bits (72), Expect = 0.73 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPM 378 PPA+R P PP +PVP VG + APP+ Sbjct: 781 PPAVRGPTPGPPLIPVP-VGAAASFSAPPI 809
>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)| Length = 434 Score = 32.3 bits (72), Expect = 0.73 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPI 366 PP + P YPP P + P++ PP+ YP+ Sbjct: 55 PPHTKPPIEYPPPHVKPPIQYPPPHEKPPIEYPL 88 Score = 32.0 bits (71), Expect = 0.95 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIY 363 PP ++ P YPP P + +P++ PP+ P Y Sbjct: 66 PPHVKPPIQYPPPHEKPPIEYPLPHEKPPVYEPPY 100 Score = 31.6 bits (70), Expect = 1.2 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP 369 PP + P YPP P + P++ PP+ YP Sbjct: 152 PPHEKPPIEYPPPHEKPPIEYPPPHEKPPIEYP 184 Score = 30.0 bits (66), Expect = 3.6 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP 369 PP + P +PP P + P++ PP+ YP Sbjct: 130 PPYEKPPLVHPPPHDKPPIEYHPPHEKPPIEYP 162 Score = 30.0 bits (66), Expect = 3.6 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP 369 PP + P YPP P + P+ PP+ YP Sbjct: 44 PPHEKPPIEYPPPHTKPPIEYPPPHVKPPIQYP 76 Score = 29.3 bits (64), Expect = 6.2 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIY 363 PP + P YPP P + P++ PP+ P Y Sbjct: 163 PPHEKPPIEYPPPHEKPPIEYPPPHEKPPVYEPPY 197 Score = 28.9 bits (63), Expect = 8.1 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = -3 Query: 473 QSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP 369 + PP P +PP P + P+ PP+ YP Sbjct: 31 EKPPPAHPPPVHPPPHEKPPIEYPPPHTKPPIEYP 65
>LEG3_CANFA (P38486) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) Length = 295 Score = 32.0 bits (71), Expect = 0.95 Identities = 26/76 (34%), Positives = 28/76 (36%), Gaps = 14/76 (18%) Frame = -3 Query: 482 YCGQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP--------------IYAGYNSG 345 Y GQ+PP A P P G P QAPP TYP G SG Sbjct: 71 YPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGTYPGPTAPAYPGPTAPGTQPGQPSG 130 Query: 344 LGAYGNAMSPAFHQAY 297 GAY P+ AY Sbjct: 131 PGAYPPPGQPSAPGAY 146 Score = 29.6 bits (65), Expect = 4.7 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = -3 Query: 482 YCGQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYA---GY--NSGLGAYGNAMS 318 Y GQ+PP A P P G P QAPP YP A GY + G Y + Sbjct: 53 YPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGTYPGPTA 112 Query: 317 PAF 309 PA+ Sbjct: 113 PAY 115
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 32.0 bits (71), Expect = 0.95 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVG--LGMPYQAPPMTYPIYAGYNSGL-------GAYGNAMSP 315 PPA P A PA P+P G L P PP T P G SG A G+ MSP Sbjct: 409 PPASPAPPAAAPAGPLPAYGADLRPPVTTPPATPPTPTGPISGAAVTPSSPAAGGSLMSP 468 Query: 314 AFHQA 300 +++ Sbjct: 469 VVNKS 473
>LEG3_HUMAN (P17931) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) (L-31) (Galactoside-binding protein) (GALBP) Length = 249 Score = 32.0 bits (71), Expect = 0.95 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Frame = -3 Query: 500 PAGHALYCGQSPPA----MREPYAYPPAMPVPNVGLGMPYQAPPMTYP-IYAGYNSGLGA 336 PAG Y G S P P AYP P P G P P P +Y G SG GA Sbjct: 29 PAGAGGYPGASYPGAYPGQAPPGAYPGQAP-PGAYHGAPGAYPGAPAPGVYPGPPSGPGA 87 Query: 335 YGNAMSPAFHQAY 297 Y ++ P+ AY Sbjct: 88 YPSSGQPSAPGAY 100
>DNJBA_MOUSE (Q9QYI5) DnaJ homolog subfamily B member 10 (mDJ8)| Length = 259 Score = 30.8 bits (68), Expect = 2.1 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +2 Query: 44 TELQHKGPHTRHPYFTFSSSVFSAEVNMSANN 139 +ELQ++GP P+FTFSSS F A + S+++ Sbjct: 106 SELQNQGPRLTGPFFTFSSS-FPANSDFSSSS 136
>EPOR_RAT (Q07303) Erythropoietin receptor precursor (EPO-R)| Length = 507 Score = 30.8 bits (68), Expect = 2.1 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 12/72 (16%) Frame = -2 Query: 405 WNAIPSPSHDLPHL---------RWIQQWPGSLW---QCHVPSLPPGLLPVESVGNDQMT 262 W IPSP ++ L W+ Q G LW P PP L V S +T Sbjct: 282 WPGIPSPENEFEGLFTTHKGNFQLWLLQRDGCLWWSPSSPFPEDPPAHLEVLSERRWGVT 341 Query: 261 RADDGGASSTVP 226 +A D GA P Sbjct: 342 QAGDAGAEDKGP 353
>CO8A1_HUMAN (P27658) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 30.8 bits (68), Expect = 2.1 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGYNSG 345 PPA+ P P +P++GLG+ PP Y G N G Sbjct: 570 PPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGG 610
>PRLHR_MOUSE (Q6VMN6) Prolactin-releasing peptide receptor (PrRP receptor)| (PrRPR) (G-protein coupled receptor 10) Length = 370 Score = 30.4 bits (67), Expect = 2.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 318 PSLPPGLLPVESVGNDQMTRADDGGASSTVP 226 P L GLLP S +Q A +G S+TVP Sbjct: 12 PDLSSGLLPASSTPANQSAEASEGNLSATVP 42
>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)| Length = 1094 Score = 30.4 bits (67), Expect = 2.8 Identities = 19/55 (34%), Positives = 22/55 (40%) Frame = -3 Query: 479 CGQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGYNSGLGAYGNAMSP 315 C + PPA P PP P P +G P PP P G LG G + P Sbjct: 571 CAEPPPAPPLPGDLPPPPPPPPLGTDGPVPPPPPPPP--GGPPDILGGQGPDIGP 623
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 30.4 bits (67), Expect = 2.8 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP 369 PP R P A PP P G+G P P YP Sbjct: 312 PPPSRAPTAAPPPPPPSRPGVGAPPPPPNRMYP 344
>ANX11_HUMAN (P50995) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)| (CAP-50) (56 kDa autoantigen) Length = 505 Score = 30.4 bits (67), Expect = 2.8 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -3 Query: 476 GQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP 369 G +PP+ Y P PVP + P Q PP YP Sbjct: 110 GGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYP 145 Score = 29.3 bits (64), Expect = 6.2 Identities = 26/73 (35%), Positives = 28/73 (38%), Gaps = 17/73 (23%) Frame = -3 Query: 482 YCGQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPI-------YAG-----YNSGL- 342 Y G PP P YPPA P G Y PP PI YAG Y SG+ Sbjct: 3 YPGYPPP----PGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMA 58 Query: 341 ----GAYGNAMSP 315 G +G A P Sbjct: 59 ANMSGTFGGANMP 71
>DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)| Length = 870 Score = 30.4 bits (67), Expect = 2.8 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPM 378 PPA+R P PP +P+P VG + APP+ Sbjct: 781 PPAVRGPTPGPPLIPMP-VGATSSFSAPPI 809
>DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)| Length = 870 Score = 30.4 bits (67), Expect = 2.8 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPM 378 PPA+R P PP +P+P VG + APP+ Sbjct: 781 PPAVRGPTPGPPLIPMP-VGATSSFSAPPI 809
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 30.4 bits (67), Expect = 2.8 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -3 Query: 500 PAGHALYCGQSPPAMREPYAYPPAMPVPN-VGLGMPYQAPPMTYP 369 P +L G PP M P ++PP +P P + G+P PP P Sbjct: 223 PVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMP 267
>DAAM2_HUMAN (Q86T65) Disheveled-associated activator of morphogenesis 2| Length = 1068 Score = 25.8 bits (55), Expect(2) = 3.5 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Frame = -2 Query: 396 IPSPSHDLPHLRWI----QQWPGSLW 331 +P PSH L W+ ++ PG++W Sbjct: 598 VPQPSHPLKSFNWVKLNEERVPGTVW 623 Score = 22.7 bits (47), Expect(2) = 3.5 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%) Frame = -3 Query: 479 CGQSPPAMREPYAYPPAMP--VPNVGLGMPYQAPPMTYP 369 C PP P PP P P +G+G+P P YP Sbjct: 551 CCPPPPPPPLPPGGPPTPPGAPPCLGMGLPLPQDP--YP 587
>PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein (Signal| transduction protein Xp95) Length = 867 Score = 30.0 bits (66), Expect = 3.6 Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 19/88 (21%) Frame = -3 Query: 500 PAGHALYCGQSPPAMREPYAYPPAMPVPNVGL-------------------GMPYQAPPM 378 PA ++ + PP P A P A PVP +P QA Sbjct: 746 PAPRTVFSAKQPPPRPPPPAMPSASPVPASAAQASNPAPTAAADSSQPPSNTIPSQAQGP 805 Query: 377 TYPIYAGYNSGLGAYGNAMSPAFHQAYY 294 YP Y GY G YG M ++ Y Sbjct: 806 PYPSYPGYP---GYYGMPMPVGYNPYMY 830
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGY-NSGLGAYGNAMSPA 312 PPA+ +P PA PVP+ L PY P YA Y + Y A SPA Sbjct: 145 PPAIVQPSVVIPATPVPS--LSSPYLEYTPASPAYAQYPPATYDQYPYAASPA 195
>CBPA_DICDI (P35085) Calcium-binding protein| Length = 467 Score = 30.0 bits (66), Expect = 3.6 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Frame = -3 Query: 476 GQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGYNSGL-GAY 333 GQ PP +P YPP P G P Q PP Y G GAY Sbjct: 135 GQYPPQQGQPGQYPPQQP------GQPGQYPPQQQGQYPPQQPGQPGAY 177
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 29.6 bits (65), Expect = 4.7 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGY-NSGLGAYGNAMSPA 312 PPA+ +P PA PVP+ L PY P YA Y + Y A SPA Sbjct: 124 PPAIVQPSVVIPAAPVPS--LSSPYIEYTPASPAYAQYPPATYDQYPYAASPA 174
>RENT1_ARATH (Q9FJR0) Regulator of nonsense transcripts 1 homolog (EC 3.6.1.-)| (ATP-dependent helicase UPF1) Length = 1254 Score = 29.6 bits (65), Expect = 4.7 Identities = 17/59 (28%), Positives = 23/59 (38%) Frame = -3 Query: 482 YCGQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGYNSGLGAYGNAMSPAFH 306 Y PP P +P P+P V L P+ P + P +GA +A P H Sbjct: 979 YLPSGPPNGARPGLHPAGYPIPRVPLS-PFPGGPPSQPYAIPTRGPVGAVPHAPQPGNH 1036
>RUNX1_HUMAN (Q01196) Runt-related transcription factor 1 (Core-binding factor,| alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) (SL Length = 453 Score = 29.6 bits (65), Expect = 4.7 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 7/65 (10%) Frame = -3 Query: 470 SPPAMREP--YAYPPAMPVPNVGLGMPYQAPPMTY-----PIYAGYNSGLGAYGNAMSPA 312 S P M P + Y P +G+GM Y P Y G + G A SP+ Sbjct: 316 SDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPS 375 Query: 311 FHQAY 297 +H Y Sbjct: 376 YHLYY 380
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 29.3 bits (64), Expect = 6.2 Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 5/60 (8%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP-----IYAGYNSGLGAYGNAMSPAFHQ 303 PP P A P A P P PP P YAGY L +G S Q Sbjct: 310 PPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPDFPYGQYAGYGQDLSGFGQGFSDPSQQ 369
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 29.3 bits (64), Expect = 6.2 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +2 Query: 248 PSSALVIWSFPTDSTGSKPGGRLGTWHCHRLPGHCCIQRRWGRS-WE 385 P +A+V+ D T P LG W H LP C + GR WE Sbjct: 122 PLAAMVL-----DPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWE 163
>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein homolog) Length = 311 Score = 29.3 bits (64), Expect = 6.2 Identities = 18/62 (29%), Positives = 22/62 (35%) Frame = -3 Query: 500 PAGHALYCGQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGYNSGLGAYGNAM 321 P G+ Y G P P YP MP P PM Y GY+ A ++ Sbjct: 33 PGGYPAYPGYPQPGYGHPAGYPQPMP--------PTHPMPMNYGPGHGYDGEERAVSDSF 84 Query: 320 SP 315 P Sbjct: 85 GP 86
>RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 29.3 bits (64), Expect = 6.2 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGYNSGLGA---YGNAMSPAF 309 PP P + PP P+P + GMP PP P+ AG N G GA N ++P F Sbjct: 224 PPIPPVP-SVPPMTPLPPMS-GMPPLNPPPVAPLPAGMN-GSGAPMNLNNNLNPMF 276
>RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 29.3 bits (64), Expect = 6.2 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGYNSGLGA---YGNAMSPAF 309 PP P + PP P+P + GMP PP P+ AG N G GA N ++P F Sbjct: 224 PPIPPVP-SVPPMTPLPPMS-GMPPLNPPPVAPLPAGMN-GSGAPMNLNNNLNPMF 276
>YL37_CAEEL (P34428) Hypothetical protein F44B9.7| Length = 466 Score = 29.3 bits (64), Expect = 6.2 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -3 Query: 464 PAMREPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGYNS 348 P PY YPP +P GMP PPM P ++S Sbjct: 86 PPSSHPYGYPPMHGMPP---GMPQGMPPMMDPNMPDFSS 121
>LEG3_RAT (P08699) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) Length = 261 Score = 29.3 bits (64), Expect = 6.2 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 6/59 (10%) Frame = -3 Query: 482 YCGQSPPAMREPYAYPPAMPVPNVGLGMPYQAPPMTYP------IYAGYNSGLGAYGNA 324 Y GQ+PP A P A P P P P YP + G G GAY +A Sbjct: 43 YPGQAPPGGYPGQAPPSAYPGPTGPSAYPGPTAPGAYPGPTAPGAFPGQPGGPGAYPSA 101
>DAAM2_MOUSE (Q80U19) Disheveled-associated activator of morphogenesis 2| Length = 1068 Score = 24.3 bits (51), Expect(2) = 7.4 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -3 Query: 467 PPAMREPYAYPPAMPVPNVGLGMPYQAPP 381 PP + PPA P+P G +P APP Sbjct: 545 PPLPFDSCPPPPAPPLPPGGPPIPPGAPP 573 Score = 23.1 bits (48), Expect(2) = 7.4 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 4/26 (15%) Frame = -2 Query: 396 IPSPSHDLPHLRWI----QQWPGSLW 331 IP PSH L W+ ++ G++W Sbjct: 598 IPQPSHPLKSFNWVKLNEERVSGTVW 623
>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11| Length = 154 Score = 28.9 bits (63), Expect = 8.1 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Frame = -3 Query: 500 PAGHALYCGQSP-PAMREPYAYPPAMPVP-NVGLGMPYQAPPMTYPIYAGYNSGLGAYGN 327 PA + + P PA P +PPA P P +G P Q P + + A +G A G+ Sbjct: 21 PAAQSSFAAPPPRPAAAAPAYHPPAAPTPMGAPMGAPSQGPGLMKQMAA--TAGGVAIGS 78 Query: 326 AMSPA 312 A+ A Sbjct: 79 AVGHA 83
>HXB3_HUMAN (P14651) Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7)| Length = 431 Score = 28.9 bits (63), Expect = 8.1 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 6/57 (10%) Frame = -3 Query: 482 YCGQSPPAM----REPYAYPPAMPVPNVGLGMPYQAPPMTYPIYAGY--NSGLGAYG 330 Y SPPA + YA P P G G P + PP P Y + + GAYG Sbjct: 286 YESPSPPAFGKAHQNAYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYG 342
>RBM12_MOUSE (Q8R4X3) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 1002 Score = 28.9 bits (63), Expect = 8.1 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 11/54 (20%) Frame = -3 Query: 437 PPAMPVPNVG--------LGMPYQAPPMTYPIYAGYNSGLGA---YGNAMSPAF 309 PP PVP+V GMP PP P+ AG N G GA N M+P F Sbjct: 224 PPIPPVPSVPPMTTLPPMSGMPPLNPPPVAPLPAGMN-GSGAPIGLNNNMNPVF 276
>PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor| Length = 261 Score = 28.9 bits (63), Expect = 8.1 Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%) Frame = -3 Query: 500 PAGHALYCGQSPPAMREPYAYPPAMPVPNVG-LGMPYQAPPMTYP 369 P G L Q PP P PP P P G P Q PP T P Sbjct: 139 PGGPQLRPPQGPPPPAGPQPRPPQGPPPPAGPQPRPPQGPPTTGP 183
>PEX13_HUMAN (Q92968) Peroxisomal membrane protein PEX13 (Peroxin-13)| Length = 403 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 437 PPAMPVPNVGLGMPYQAPPMTYPIYAGYNSGLGAYGNA 324 PP +P P+ G + P Y+ ++SG GAYGN+ Sbjct: 53 PPILPRPSQQTGS--SSVNTFRPAYSSFSSGYGAYGNS 88
>NEUR2_HUMAN (Q9Y3R4) Sialidase-2 (EC 3.2.1.18) (Cytosolic sialidase)| (N-acetyl-alpha-neuraminidase 2) Length = 380 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -3 Query: 431 AMPVPNVGLGMPYQAPPMTYPIYAGYNSGLGAYGNAMSPA 312 + P P G G P Q T+P ++ + LGAY N PA Sbjct: 278 SFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPA 317
>GCX1_RAT (Q76IQ7) Granulosa cell HMG box protein 1 (GCX-1)| Length = 473 Score = 28.9 bits (63), Expect = 8.1 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Frame = -3 Query: 470 SPPAMREPYAYPPAMPVP---NVGLGMPYQAP-PMTYPIYAGYNSGLGA 336 SPP P PP +P P V L M P P +P + + SG G+ Sbjct: 375 SPPLSMSPAPQPPVLPAPMALQVQLAMSPSPPGPQDFPHISDFPSGSGS 423
>ATF1_SCHPO (P52890) Transcription factor atf1 (Transcription factor mts1)| (Protein sss1) Length = 566 Score = 28.9 bits (63), Expect = 8.1 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -3 Query: 467 PPAMREPYAYP-PAMPVPNVGLGMPYQAPPMTYPIYAGYNSGLGAYGNAMSPAFHQAYYR 291 PPA P ++ P++ G P A P+ YP ++ + G N +SPA + A R Sbjct: 124 PPAFARTLLPPVSSIASPDILSGAPGIASPLGYPAWSAFTR--GTMHNPLSPAIYDATLR 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,933,873 Number of Sequences: 219361 Number of extensions: 1793198 Number of successful extensions: 6350 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 5578 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6293 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
