ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25g19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110516.1| Zea mays CL4757_1 mRNA sequence 101 2e-18
2ref|NM_190984.1| Oryza sativa (japonica cultivar-group), predic... 76 1e-10
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
4dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
5dbj|AK101937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
6dbj|AK069400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
7gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosom... 44 0.46
8gb|AC126552.5| Mus musculus BAC clone RP23-342F3 from chromosome... 44 0.46
9gb|AC134826.4| Mus musculus BAC clone RP24-459P6 from chromosome... 42 1.8
10emb|AL590434.16| Human DNA sequence from clone RP11-181E22 on ch... 42 1.8
11emb|AL591492.11| Zebrafish DNA sequence from clone BUSM1-261O22 ... 42 1.8
12dbj|AB047519.1| Prunus persica PpExp3 mRNA for expansin, complet... 42 1.8
13gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 42 1.8
14gb|BC083774.1| Rattus norvegicus serologically defined colon can... 42 1.8
15gb|AC144688.3| Cercopithecus aethiops clone CH252-118C18, comple... 42 1.8
16ref|NM_001013199.1| Rattus norvegicus serologically defined colo... 42 1.8
17gb|AC129597.5| Mus musculus BAC clone RP23-262I17 from 13, compl... 42 1.8
18emb|AL831794.6| Mouse DNA sequence from clone RP23-114B13 on chr... 42 1.8
19ref|XM_513713.1| PREDICTED: Pan troglodytes similar to FLJ00183 ... 40 7.2
20gb|AC111033.11| Mus musculus chromosome 5, clone RP24-188E19, co... 40 7.2
21gb|AC162460.3| Mus musculus chromosome 5, clone RP24-247A21, com... 40 7.2
22gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, comp... 40 7.2
23gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, co... 40 7.2
24gb|AC024168.5| Homo sapiens chromosome 3 clone RP11-622P3 map 3p... 40 7.2
25ref|XM_758968.1| Theileria parva strain Muguga chromosome 4 hypo... 40 7.2
26gb|AC072063.5| Homo sapiens BAC clone RP11-697B15 from 7, comple... 40 7.2
27gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, co... 40 7.2
28gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, co... 40 7.2
29emb|AL021393.1|HS747E2 Human DNA sequence from clone CTA-747E2 o... 40 7.2
30emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 i... 40 7.2
31gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ... 40 7.2
32ref|NM_015370.1| Homo sapiens hypothetical protein HS747E2A (HS7... 40 7.2
33ref|NM_062974.3| Caenorhabditis elegans T14B4.1 (T14B4.1) mRNA, ... 40 7.2
34gb|AF350939.1|AF350939 Prunus cerasus expansin (EXP4) mRNA, comp... 40 7.2
35gb|AC104698.2| Homo sapiens BAC clone RP11-517F1 from 2, complet... 40 7.2
36gb|AC012502.3|AC012502 Homo sapiens BAC clone RP11-461H6 from Y,... 40 7.2
37gb|AC132808.2| Homo sapiens chromosome 3 clone RP11-794P9, compl... 40 7.2
38emb|AL035364.1|HS747E2A H.sapiens novel gene from chromosome 22 40 7.2
39emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 7.2
40ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@)... 40 7.2
41gb|U50191.3| Caenorhabditis elegans cosmid T14B4, complete sequence 40 7.2
42gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p... 40 7.2
43gb|AC079093.16| Homo sapiens chromosome 8, clone RP11-265H5, com... 40 7.2
44dbj|AP004195.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.2
45dbj|AP001205.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.2
46dbj|D87021.1| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 7.2 
>gb|AY110516.1| Zea mays CL4757_1 mRNA sequence
          Length = 955

 Score =  101 bits (51), Expect = 2e-18
 Identities = 138/167 (82%)
 Strand = Plus / Plus

                                                                       
Query: 368 cttgatcgcctggtccagtgagaacaacgttgcaattggaagcaaatttccgagcgagca 427
           |||| |||||||| |||| |||| | |  |||||||| ||||| || || ||||| | ||
Sbjct: 334 cttggtcgcctgggccagcgagagcgatattgcaattcgaagcgaacttgcgagcaatca 393

                                                                       
Query: 428 taatcgcagcattcctatccctgtctgtctcgaaagctaaagtgtacgataggcctttcc 487
           |||||||||||||||| ||||||||||| ||||| |||| |||||| ||   ||||||||
Sbjct: 394 taatcgcagcattcctgtccctgtctgtttcgaaggctagagtgtaggacgagcctttcc 453

                                                          
Query: 488 tagtttgccaaaagactgcacaggccgcagcattaccaccaccacgg 534
           |||  ||||| || ||||| |  || |||||||||||||||||||||
Sbjct: 454 tagggtgccagaaaactgccctagctgcagcattaccaccaccacgg 500
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>ref|NM_190984.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1482

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Minus

                                                                        
Query: 397  ttgcaattggaagcaaatttccgagcgagcataatcgcagcattcctatccctgtctgtc 456
            |||||||| || |||||||| ||||| ||||| || || || |||||||||||||| || 
Sbjct: 1436 ttgcaatttgaggcaaatttacgagcaagcatgattgctgcgttcctatccctgtccgtt 1377

                                                                        
Query: 457  tcgaaagctaaagtgtacgataggcctttcctagtttgccaaaagactgcacaggccgca 516
            || |||||||| ||||| || ||||||||||| |  ||||| || |||||    || |||
Sbjct: 1376 tcaaaagctaaggtgtaggacaggcctttccttgcctgccagaaaactgccgtagctgca 1317

                              
Query: 517  gcattaccaccaccacgg 534
            |||||||| |||||||||
Sbjct: 1316 gcattacccccaccacgg 1299
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Plus

                                                                            
Query: 397      ttgcaattggaagcaaatttccgagcgagcataatcgcagcattcctatccctgtctgtc 456
                |||||||| || |||||||| ||||| ||||| || || || |||||||||||||| || 
Sbjct: 34147191 ttgcaatttgaggcaaatttacgagcaagcatgattgctgcgttcctatccctgtccgtt 34147250

                                                                            
Query: 457      tcgaaagctaaagtgtacgataggcctttcctagtttgccaaaagactgcacaggccgca 516
                || |||||||| ||||| || ||||||||||| |  ||||| || |||||    || |||
Sbjct: 34147251 tcaaaagctaaggtgtaggacaggcctttccttgcctgccagaaaactgccgtagctgca 34147310

                                  
Query: 517      gcattaccaccaccacgg 534
                |||||||| |||||||||
Sbjct: 34147311 gcattacccccaccacgg 34147328



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 184      aacagctgcacgcaggcaaataaaaaga 211
                |||||||||  |||||||||||||||||
Sbjct: 34146864 aacagctgctggcaggcaaataaaaaga 34146891
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>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034E02
          Length = 165497

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Plus

                                                                          
Query: 397    ttgcaattggaagcaaatttccgagcgagcataatcgcagcattcctatccctgtctgtc 456
              |||||||| || |||||||| ||||| ||||| || || || |||||||||||||| || 
Sbjct: 143669 ttgcaatttgaggcaaatttacgagcaagcatgattgctgcgttcctatccctgtccgtt 143728

                                                                          
Query: 457    tcgaaagctaaagtgtacgataggcctttcctagtttgccaaaagactgcacaggccgca 516
              || |||||||| ||||| || ||||||||||| |  ||||| || |||||    || |||
Sbjct: 143729 tcaaaagctaaggtgtaggacaggcctttccttgcctgccagaaaactgccgtagctgca 143788

                                
Query: 517    gcattaccaccaccacgg 534
              |||||||| |||||||||
Sbjct: 143789 gcattacccccaccacgg 143806



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 184    aacagctgcacgcaggcaaataaaaaga 211
              |||||||||  |||||||||||||||||
Sbjct: 143342 aacagctgctggcaggcaaataaaaaga 143369
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>dbj|AK101937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074F22, full
            insert sequence
          Length = 2151

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Minus

                                                                        
Query: 397  ttgcaattggaagcaaatttccgagcgagcataatcgcagcattcctatccctgtctgtc 456
            |||||||| || |||||||| ||||| ||||| || || || |||||||||||||| || 
Sbjct: 1821 ttgcaatttgaggcaaatttacgagcaagcatgattgctgcgttcctatccctgtccgtt 1762

                                                                        
Query: 457  tcgaaagctaaagtgtacgataggcctttcctagtttgccaaaagactgcacaggccgca 516
            || |||||||| ||||| || ||||||||||| |  ||||| || |||||    || |||
Sbjct: 1761 tcaaaagctaaggtgtaggacaggcctttccttgcctgccagaaaactgccgtagctgca 1702

                              
Query: 517  gcattaccaccaccacgg 534
            |||||||| |||||||||
Sbjct: 1701 gcattacccccaccacgg 1684



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 184  aacagctgcacgcaggcaaataaaaaga 211
            |||||||||  |||||||||||||||||
Sbjct: 2028 aacagctgctggcaggcaaataaaaaga 2001
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>dbj|AK069400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011I15, full
            insert sequence
          Length = 2294

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Minus

                                                                        
Query: 397  ttgcaattggaagcaaatttccgagcgagcataatcgcagcattcctatccctgtctgtc 456
            |||||||| || |||||||| ||||| ||||| || || || |||||||||||||| || 
Sbjct: 2001 ttgcaatttgaggcaaatttacgagcaagcatgattgctgcgttcctatccctgtccgtt 1942

                                                                        
Query: 457  tcgaaagctaaagtgtacgataggcctttcctagtttgccaaaagactgcacaggccgca 516
            || |||||||| ||||| || ||||||||||| |  ||||| || |||||    || |||
Sbjct: 1941 tcaaaagctaaggtgtaggacaggcctttccttgcctgccagaaaactgccgtagctgca 1882

                              
Query: 517  gcattaccaccaccacgg 534
            |||||||| |||||||||
Sbjct: 1881 gcattacccccaccacgg 1864



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 184  aacagctgcacgcaggcaaataaaaaga 211
            |||||||||  |||||||||||||||||
Sbjct: 2208 aacagctgctggcaggcaaataaaaaga 2181
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>gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosome 12, complete sequence
          Length = 176510

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 96     cctctttcctttttctctctca 117
              ||||||||||||||||||||||
Sbjct: 143318 cctctttcctttttctctctca 143339
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>gb|AC126552.5| Mus musculus BAC clone RP23-342F3 from chromosome 15, complete sequence
          Length = 213862

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 91     aaaggcctctttcctttttctc 112
              ||||||||||||||||||||||
Sbjct: 178643 aaaggcctctttcctttttctc 178622
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>gb|AC134826.4| Mus musculus BAC clone RP24-459P6 from chromosome 13, complete
            sequence
          Length = 168202

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 95   gcctctttcctttttctctct 115
            |||||||||||||||||||||
Sbjct: 9916 gcctctttcctttttctctct 9896
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>emb|AL590434.16| Human DNA sequence from clone RP11-181E22 on chromosome 1 Contains the
             3' end of the gene for a novel protein, a novel
             pseudogene, the SFPQ gene for splicing factor
             proline/glutamine rich (polypyrimidine tract binding
             protein associated), the 5' end of the ZNF262 gene for
             zinc finger protein 262 and a CpG island, complete
             sequence
          Length = 185909

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 97    ctctttcctttttctctctcagctg 121
             |||||||||||||||||||| ||||
Sbjct: 33904 ctctttcctttttctctctctgctg 33928
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>emb|AL591492.11| Zebrafish DNA sequence from clone BUSM1-261O22 in linkage group 20
             Contains a novel gene similar to FKBP3 (FK506 binding
             protein 3), a novel gene for a protein similar to pre-mRNA
             processing proteins, a novel retrotransposon and two CpG
             islands, complete sequence
          Length = 92083

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    gcctctttcctttttctctct 115
             |||||||||||||||||||||
Sbjct: 12041 gcctctttcctttttctctct 12021
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>dbj|AB047519.1| Prunus persica PpExp3 mRNA for expansin, complete cds
          Length = 1340

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  ctctttcctttttctctctca 117
           |||||||||||||||||||||
Sbjct: 48  ctctttcctttttctctctca 68
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 100     tttcctttttctctctcagct 120
               |||||||||||||||||||||
Sbjct: 1294065 tttcctttttctctctcagct 1294085
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>gb|BC083774.1| Rattus norvegicus serologically defined colon cancer antigen 10, mRNA
            (cDNA clone MGC:94726 IMAGE:7193421), complete cds
          Length = 1852

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 99   ctttcctttttctctctcagc 119
            |||||||||||||||||||||
Sbjct: 1460 ctttcctttttctctctcagc 1440
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>gb|AC144688.3| Cercopithecus aethiops clone CH252-118C18, complete sequence
          Length = 128272

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    tttcctttttctctctcagct 120
              |||||||||||||||||||||
Sbjct: 111735 tttcctttttctctctcagct 111755
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>ref|NM_001013199.1| Rattus norvegicus serologically defined colon cancer antigen 10
            (Sdccag10), mRNA
          Length = 1852

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 99   ctttcctttttctctctcagc 119
            |||||||||||||||||||||
Sbjct: 1460 ctttcctttttctctctcagc 1440
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>gb|AC129597.5| Mus musculus BAC clone RP23-262I17 from 13, complete sequence
          Length = 195537

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     gcctctttcctttttctctct 115
              |||||||||||||||||||||
Sbjct: 170209 gcctctttcctttttctctct 170189
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>emb|AL831794.6| Mouse DNA sequence from clone RP23-114B13 on chromosome 2, complete
             sequence
          Length = 223128

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 92    aaggcctctttcctttttctctctc 116
             |||||||||| ||||||||||||||
Sbjct: 87256 aaggcctcttccctttttctctctc 87280
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>ref|XM_513713.1| PREDICTED: Pan troglodytes similar to FLJ00183 protein (LOC457195),
            mRNA
          Length = 1544

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  ctttttctctctcagctgtc 123
            ||||||||||||||||||||
Sbjct: 1107 ctttttctctctcagctgtc 1088
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>gb|AC111033.11| Mus musculus chromosome 5, clone RP24-188E19, complete sequence
          Length = 175890

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    ctctttcctttttctctctc 116
             ||||||||||||||||||||
Sbjct: 88125 ctctttcctttttctctctc 88106
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>gb|AC162460.3| Mus musculus chromosome 5, clone RP24-247A21, complete sequence
          Length = 170006

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ctctttcctttttctctctc 116
              ||||||||||||||||||||
Sbjct: 129138 ctctttcctttttctctctc 129157
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>gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, complete sequence
          Length = 247484

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ctctttcctttttctctctc 116
              ||||||||||||||||||||
Sbjct: 150887 ctctttcctttttctctctc 150906
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>gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, complete sequence
          Length = 207556

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 47     atttcttgataataactcaaggaaagct 74
              ||||||||||||| || |||||||||||
Sbjct: 163800 atttcttgataattacccaaggaaagct 163773
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>gb|AC024168.5| Homo sapiens chromosome 3 clone RP11-622P3 map 3p, complete sequence
          Length = 186276

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    ctctttcctttttctctctc 116
             ||||||||||||||||||||
Sbjct: 82732 ctctttcctttttctctctc 82713
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>ref|XM_758968.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0426) partial mRNA
          Length = 2706

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  atttcttgataataactcaa 66
           ||||||||||||||||||||
Sbjct: 426 atttcttgataataactcaa 445
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>gb|AC072063.5| Homo sapiens BAC clone RP11-697B15 from 7, complete sequence
          Length = 136286

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    taaaaggcctctttcctttttctc 112
             ||||| ||||||||||||||||||
Sbjct: 62673 taaaaagcctctttcctttttctc 62696
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>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence
          Length = 214124

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    tctctcagctgtcacgaata 130
              ||||||||||||||||||||
Sbjct: 144650 tctctcagctgtcacgaata 144631
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>gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, complete sequence
          Length = 208469

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    cctctttcctttttctctct 115
             ||||||||||||||||||||
Sbjct: 60039 cctctttcctttttctctct 60020
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>emb|AL021393.1|HS747E2 Human DNA sequence from clone CTA-747E2 on chromosome 22q12.1, complete
             sequence
          Length = 109859

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ctctttcctttttctctctc 116
             ||||||||||||||||||||
Sbjct: 55160 ctctttcctttttctctctc 55179
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>emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 in linkage group 3,
             complete sequence
          Length = 198900

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    tctttcctttttctctctca 117
             ||||||||||||||||||||
Sbjct: 25433 tctttcctttttctctctca 25452
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>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete
             sequence
          Length = 152593

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 253   gtacaaacctcctaatctcacaaa 276
             ||||| ||||||||||||||||||
Sbjct: 83555 gtacacacctcctaatctcacaaa 83532
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>ref|NM_015370.1| Homo sapiens hypothetical protein HS747E2A (HS747E2A), mRNA
          Length = 1070

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 97  ctctttcctttttctctctc 116
           ||||||||||||||||||||
Sbjct: 67  ctctttcctttttctctctc 48
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>ref|NM_062974.3| Caenorhabditis elegans T14B4.1 (T14B4.1) mRNA, complete cds
          Length = 3514

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   atctgtacatttcttgataa 58
            ||||||||||||||||||||
Sbjct: 1791 atctgtacatttcttgataa 1772
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>gb|AF350939.1|AF350939 Prunus cerasus expansin (EXP4) mRNA, complete cds
          Length = 965

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  tctttcctttttctctctca 117
           ||||||||||||||||||||
Sbjct: 27  tctttcctttttctctctca 46
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>gb|AC104698.2| Homo sapiens BAC clone RP11-517F1 from 2, complete sequence
          Length = 115170

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   gcctggtccagtgagaacaa 394
             ||||||||||||||||||||
Sbjct: 18608 gcctggtccagtgagaacaa 18627
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>gb|AC012502.3|AC012502 Homo sapiens BAC clone RP11-461H6 from Y, complete sequence
          Length = 113799

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    ctctttcctttttctctctc 116
             ||||||||||||||||||||
Sbjct: 67992 ctctttcctttttctctctc 67973
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>gb|AC132808.2| Homo sapiens chromosome 3 clone RP11-794P9, complete sequence
          Length = 195741

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ctctttcctttttctctctc 116
              ||||||||||||||||||||
Sbjct: 102199 ctctttcctttttctctctc 102218
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>emb|AL035364.1|HS747E2A H.sapiens novel gene from chromosome 22
          Length = 1070

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 97  ctctttcctttttctctctc 116
           ||||||||||||||||||||
Sbjct: 67  ctctttcctttttctctctc 48
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>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 495    ccaaaagactgcacaggccgcagc 518
              ||||||||||||| ||||||||||
Sbjct: 864072 ccaaaagactgcagaggccgcagc 864095
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>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22
          Length = 909203

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     cctctttcctttttctctct 115
              ||||||||||||||||||||
Sbjct: 797235 cctctttcctttttctctct 797216
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>gb|U50191.3| Caenorhabditis elegans cosmid T14B4, complete sequence
          Length = 36773

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    atctgtacatttcttgataa 58
             ||||||||||||||||||||
Sbjct: 34660 atctgtacatttcttgataa 34641
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>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence
          Length = 169005

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     cctctttcctttttctctct 115
              ||||||||||||||||||||
Sbjct: 148998 cctctttcctttttctctct 148979
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>gb|AC079093.16| Homo sapiens chromosome 8, clone RP11-265H5, complete sequence
          Length = 141612

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ctctttcctttttctctctc 116
             ||||||||||||||||||||
Sbjct: 11334 ctctttcctttttctctctc 11353
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>dbj|AP004195.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1434A12
          Length = 151834

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ctctttcctttttctctctc 116
             ||||||||||||||||||||
Sbjct: 25603 ctctttcctttttctctctc 25622
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>dbj|AP001205.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1083B1, complete
              sequence
          Length = 155731

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ctctttcctttttctctctc 116
              ||||||||||||||||||||
Sbjct: 138338 ctctttcctttttctctctc 138357
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>dbj|D87021.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:84E4
          Length = 36471

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    cctctttcctttttctctct 115
             ||||||||||||||||||||
Sbjct: 31012 cctctttcctttttctctct 30993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,026,940
Number of Sequences: 3902068
Number of extensions: 5026940
Number of successful extensions: 95019
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94869
Number of HSP's gapped (non-prelim): 145
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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