Clone Name | rbasd25g01 |
---|---|
Clone Library Name | barley_pub |
>EXT2_MOUSE (P70428) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 2 homolog) Length = 718 Score = 52.8 bits (125), Expect = 8e-07 Identities = 32/105 (30%), Positives = 57/105 (54%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAAF F + Y + +++V + NCED+ MNF+ AN TG+ ++ Sbjct: 591 SMVLTGAAFYHKYFNYL-YTYKMPGDIKNWVDAHMNCEDIAMNFLVANV---TGKAVIK- 645 Query: 402 VHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLPQK 268 V P + +++ Q H R++C+ KF+S++G +P K Sbjct: 646 VTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGTMPLK 690
>EXT2_HUMAN (Q93063) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXT2) (Multiple exostoses protein Length = 718 Score = 52.8 bits (125), Expect = 8e-07 Identities = 32/105 (30%), Positives = 57/105 (54%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAAF F + Y + +++V + NCED+ MNF+ AN TG+ ++ Sbjct: 591 SMVLTGAAFYHKYFNYL-YTYKMPGDIKNWVDAHMNCEDIAMNFLVANV---TGKAVIK- 645 Query: 402 VHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLPQK 268 V P + +++ Q H R++C+ KF+S++G +P K Sbjct: 646 VTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGTMPLK 690
>EXT2_BOVIN (O77783) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (HS-polymerase) (HS-POL) (Multiple exostoses protein 2 homolog) Length = 718 Score = 52.8 bits (125), Expect = 8e-07 Identities = 32/105 (30%), Positives = 57/105 (54%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAAF F + Y + +++V + NCED+ MNF+ AN TG+ ++ Sbjct: 591 SMVLTGAAFYHKYFNYL-YTYKMPGDIKNWVDAHMNCEDIAMNFLVANV---TGKAVIK- 645 Query: 402 VHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLPQK 268 V P + +++ Q H R++C+ KF+S++G +P K Sbjct: 646 VTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGTMPLK 690
>EXT2_DROME (Q9Y169) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225) (Protein sister| of tout-velu) Length = 717 Score = 50.8 bits (120), Expect = 3e-06 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 5/108 (4%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEX---ARKG--RDYVHKNFNCEDLLMNFMYANASSGTGR 418 +++LTGAAF +YWS A G +D+V ++ NCED+ MNF+ AN ++ Sbjct: 590 SMVLTGAAF------HHKYWSHMYTHAMPGDIKDWVDEHMNCEDIAMNFLVANITNNPPI 643 Query: 417 RTVEYVHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLP 274 + V P + ++ + H R+ C+ +FS IYG +P Sbjct: 644 K----VTPRKKFKCPECTNTEMLSADLNHMRERSACIDRFSKIYGRMP 687
>EXT2_CAEEL (O01705) Exostosin-2 (EC 2.4.1.223) (EC 2.4.1.224)| (Glucuronyl-galactosyl-proteoglycan/Glucuronosyl-N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses homolog 2) Length = 814 Score = 46.6 bits (109), Expect = 6e-05 Identities = 29/106 (27%), Positives = 52/106 (49%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 ++ILTGAAF+ + Y E + R++V+ NCED+ MN++ ++ + +T Sbjct: 691 SMILTGAAFIHKNY-LTAYTYEMPAEIREHVNSIKNCEDIAMNYLVSHLTRKPPIKTTS- 748 Query: 402 VHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLPQKW 265 W + + T H++ R +C+ F+ IYG P K+ Sbjct: 749 ---RWTLKCPTCTESLYKEGT--HFEKRHECMRLFTKIYGYNPLKF 789
>EXTL3_HUMAN (O43909) Exostosin-like 3 (EC 2.4.1.223)| (Glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXTL3) (Multiple exostosis-like protein 3) (Hereditary multiple exostoses gene isolog) (E Length = 919 Score = 46.2 bits (108), Expect = 7e-05 Identities = 32/103 (31%), Positives = 50/103 (48%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAAF +A+ Y + RD V + NCED+ MNF+ ++ + R+ Sbjct: 796 SMVLTGAAFFHKYYAYL-YSYVMPQAIRDMVDEYINCEDIAMNFLVSHIT----RKPPIK 850 Query: 402 VHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLP 274 V W A+S D H+ R KC+ F +YG +P Sbjct: 851 VTSRWTFRCPGCPQ-ALSHD-DSHFHERHKCINFFVKVYGYMP 891
>EXTL3_MOUSE (Q9WVL6) Exostosin-like 3 (EC 2.4.1.-) (Multiple exostosis-like| protein 3) Length = 918 Score = 46.2 bits (108), Expect = 7e-05 Identities = 32/103 (31%), Positives = 50/103 (48%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAAF +A+ Y + RD V + NCED+ MNF+ ++ + R+ Sbjct: 795 SMVLTGAAFFHKYYAYL-YSYVMPQAIRDMVDEYINCEDIAMNFLVSHIT----RKPPIK 849 Query: 402 VHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLP 274 V W A+S D H+ R KC+ F +YG +P Sbjct: 850 VTSRWTFRCPGCPQ-ALSHD-DSHFHERHKCINFFVKVYGYMP 890
>EXT3_DROME (Q9XZ08) Exostosin-3 (EC 2.4.1.223) (Protein brother of tout-velu)| Length = 972 Score = 45.4 bits (106), Expect = 1e-04 Identities = 31/103 (30%), Positives = 51/103 (49%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAAF+ + + Y + RD V + NCED+ MNF+ ++ + R+ Sbjct: 849 SMVLTGAAFVHKYYLYL-YTYHLPQAIRDKVDEYMNCEDIAMNFLVSHIT----RKPPVK 903 Query: 402 VHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLP 274 V W V++S D H+ R KC+ FS ++G P Sbjct: 904 VTSRWTFRCPG-CPVSLSED-DTHFQERHKCINFFSRVFGYTP 944
>EXT1C_BRARE (Q5IGR6) Exostosin-1c (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1c) (Multiple exostoses protein 1 homolog c) Length = 737 Score = 38.5 bits (88), Expect = 0.016 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 9/112 (8%) Frame = -1 Query: 582 TLILTGAAFMDSEF--AFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTV 409 ++ILTGAAF + F Y R D+ + NCED+LMNF+ + +V Sbjct: 608 SIILTGAAFYHRYYHHLFSHYLPSSLRALVDH---SCNCEDILMNFLVS---------SV 655 Query: 408 EYVHPAWAIDTSKLSSVAISRDTQ-------KHYDVRTKCLAKFSSIYGPLP 274 ++ P + + + T+ +H+ R +C+ FSS +G +P Sbjct: 656 AHLPPVKVAQRKQYKEMPSLQGTKMAPWANPEHFTQRQECVNTFSSWFGYMP 707
>EXTL2_MOUSE (Q9ES89) Exostosin-like 2 (EC 2.4.1.223)| (Glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Alpha-1,4-N-acetylhexosaminyltransferase EXTL2) (Alpha-GalNAcT EXTL2) (EXT-related protein 2) Length = 330 Score = 37.7 bits (86), Expect = 0.027 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 5/118 (4%) Frame = -1 Query: 603 PGARRATTLILTGAAFMDSEFAFKRYWSEXARKGRDYVH----KNFNCEDLLMNFMYANA 436 PG +++L GA+F +S++ E +K VH + NC+D+ MNF+ Sbjct: 203 PGNGDQYSMVLIGASFFNSKYL------ELFQKQPAAVHALIDETQNCDDIAMNFL---V 253 Query: 435 SSGTGRRTVEYVHPAWAIDTSK-LSSVAISRDTQKHYDVRTKCLAKFSSIYGPLPQKW 265 + TG+ + +V P ++ K + + +H+ R+ C+ K +IY +P K+ Sbjct: 254 TRHTGKPSGIFVKPINMVNLEKETNGYSGMWHRAEHFLQRSYCINKLVNIYDGMPLKY 311
>EXT1A_BRARE (Q5IGR8) Exostosin-1a (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1a) (Multiple exostoses protein 1 homolog a) Length = 730 Score = 37.4 bits (85), Expect = 0.035 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 2/105 (1%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFK-RYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVE 406 +++LTGAAF + + ++ + KG V + NCED+LMNF+ S+ T ++ Sbjct: 601 SMVLTGAAFYHRYYNYLYTHYLPGSLKG--LVDQLSNCEDILMNFL---VSAVTKMPPIK 655 Query: 405 YVHPAWAIDTSKLSSVAISR-DTQKHYDVRTKCLAKFSSIYGPLP 274 +T + SR H+ R C+ KF+S +G +P Sbjct: 656 VTQKKQYKETMMGQTSRASRWADPDHFAQRQTCMNKFASWFGTMP 700
>EXT1B_BRARE (Q5IGR7) Exostosin-1b (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1b) (Multiple exostoses protein 1 homolog b) Length = 741 Score = 37.0 bits (84), Expect = 0.045 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAA + F Y + V + NCED+LMNF+ S+ T V+ Sbjct: 612 SMVLTGAAIYHRYYHFL-YTHFLPSSLKSMVDQLANCEDILMNFL---VSAVTKLPPVKV 667 Query: 402 VHPAWAIDTSKLSSVAISR-DTQKHYDVRTKCLAKFSSIYGPLP 274 +T S SR H+ R C+ KF+S +G +P Sbjct: 668 TQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGGMP 711
>ARGI_YEAST (P00812) Arginase (EC 3.5.3.1)| Length = 333 Score = 35.8 bits (81), Expect = 0.10 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +1 Query: 208 PHCPESRLFVPAILSPAKLPFLRQRAVYGGE 300 PHCPES +VP LSP K+ ++ R V GE Sbjct: 178 PHCPESLKWVPGNLSPKKIAYIGLRDVDAGE 208
>EXT1_CRIGR (Q9JK82) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Heparan sulfate| copolymerase) (Multiple exostoses protein 1 homolog) Length = 746 Score = 33.1 bits (74), Expect = 0.66 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAA + + Y ++ V + NCED+LMNF+ S+ T ++ Sbjct: 617 SMVLTGAAIYHKYYHYL-YTHYLPASLKNMVDQLANCEDILMNFL---VSAVTKLPPIKV 672 Query: 402 VHPAWAIDTSKLSSVAISR-DTQKHYDVRTKCLAKFSSIYGPLP 274 +T + SR H+ R C+ F+S +G +P Sbjct: 673 TQKKQYKETMMGQTSRASRWADPDHFAQRQSCMNTFASWFGYMP 716
>EXT1_MOUSE (P97464) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 1 homolog) Length = 746 Score = 32.7 bits (73), Expect = 0.86 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAA + + Y ++ V + NCED+LMNF+ S+ T ++ Sbjct: 617 SMVLTGAAIYHKYYHYL-YSHYLPASLKNMVDQLANCEDILMNFL---VSAVTKLPPIKV 672 Query: 402 VHPAWAIDTSKLSSVAISR-DTQKHYDVRTKCLAKFSSIYGPLP 274 +T + SR H+ R C+ F+S +G +P Sbjct: 673 TQKKQYKETMMGQTSRASRWADPDHFAQRQSCMNTFASWFGYMP 716
>EXT1_HUMAN (Q16394) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXT1) (Multiple exostoses protein Length = 746 Score = 32.7 bits (73), Expect = 0.86 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAA + + Y ++ V + NCED+LMNF+ S+ T ++ Sbjct: 617 SMVLTGAAIYHKYYHYL-YSHYLPASLKNMVDQLANCEDILMNFL---VSAVTKLPPIKV 672 Query: 402 VHPAWAIDTSKLSSVAISR-DTQKHYDVRTKCLAKFSSIYGPLP 274 +T + SR H+ R C+ F+S +G +P Sbjct: 673 TQKKQYKETMMGQTSRASRWADPDHFAQRQSCMNTFASWFGYMP 716
>EXT1_DROME (Q9V730) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein| tout-velu) Length = 760 Score = 32.3 bits (72), Expect = 1.1 Identities = 26/103 (25%), Positives = 48/103 (46%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++LTGAAF + + Y + + V ++ NCED+LMN + ++ T + ++ Sbjct: 633 SIVLTGAAFYHRYYNYL-YTNWLSLLLLKTVQQSSNCEDILMNLLVSHV---TRKPPIKV 688 Query: 402 VHPAWAIDTSKLSSVAISRDTQKHYDVRTKCLAKFSSIYGPLP 274 D S D H+ R CL F++++G +P Sbjct: 689 TQRKGYKDRETGRSPWNDPD---HFIQRQSCLNTFAAVFGYMP 728
>CLC14_MOUSE (Q8VCP9) C-type lectin domain family 14 member A precursor| Length = 459 Score = 32.0 bits (71), Expect = 1.5 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 Query: 201 FPPPLSRVQAICPSHLVACQTPISEAEGRIWRRTWPGT 314 F PP + V A+CP L T I E W +PGT Sbjct: 205 FSPPGTEVSAMCPGDLSVSSTCIQEETSAHWDGLFPGT 242
>EXTL2_HUMAN (Q9UBQ6) Exostosin-like 2 (EC 2.4.1.223)| (Glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Alpha-1,4-N-acetylhexosaminyltransferase EXTL2) (Alpha-GalNAcT EXTL2) (EXT-related protein 2) Length = 330 Score = 31.2 bits (69), Expect = 2.5 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 2/108 (1%) Frame = -1 Query: 582 TLILTGAAFMDSEFAFKRYWSEXARKGRDYVHKNFNCEDLLMNFMYANASSGTGRRTVEY 403 +++L GA+F +S++ + + NC+D+ MNF+ A G+ + + Sbjct: 209 SMVLIGASFFNSKYL--ELFQRQPAAVHALIDDTQNCDDIAMNFIIA---KHIGKTSGIF 263 Query: 402 VHPAWAIDTSKLSSVAISR--DTQKHYDVRTKCLAKFSSIYGPLPQKW 265 V P + K ++ S +H R+ C+ K +IY +P ++ Sbjct: 264 VKPVNMDNLEKETNSGYSGMWHRAEHALQRSYCINKLVNIYDSMPLRY 311 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,999,612 Number of Sequences: 219361 Number of extensions: 1851494 Number of successful extensions: 5207 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 5020 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5192 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)