ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25f19 |
|---|---|
| Clone Library Name | barley_pub |
>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC| 2.7.11.1) Length = 423 Score = 46.6 bits (109), Expect = 4e-05 Identities = 21/44 (47%), Positives = 30/44 (68%) Frame = -3 Query: 496 RMVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL 365 +MVDP L+G YP + L + + A+CVQ +P RP +S+VV AL Sbjct: 334 KMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377
>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)| (AvrPphB susceptible protein 1) Length = 456 Score = 43.5 bits (101), Expect = 4e-04 Identities = 24/69 (34%), Positives = 39/69 (56%) Frame = -3 Query: 496 RMVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQALVRLVQRANMTKKMLDG 317 ++ DP LKG +P ++L + V ++C+Q + RP +++VV AL L +A K Sbjct: 317 KLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQAYDPSK---- 372 Query: 316 DASRRGDDQ 290 D SRR D+ Sbjct: 373 DDSRRNRDE 381
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 38.1 bits (87), Expect = 0.015 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -3 Query: 502 LDRMVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL 365 L+ +VD L+G Y + + + V LC Q+ P RP MSEVV+ L Sbjct: 518 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 563
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 38.1 bits (87), Expect = 0.015 Identities = 17/46 (36%), Positives = 29/46 (63%) Frame = -3 Query: 502 LDRMVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL 365 +D +VDP +KG Y A++L R +V C++ +RP M ++V+ L Sbjct: 822 VDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVREL 867
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does| not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 38.1 bits (87), Expect = 0.015 Identities = 17/46 (36%), Positives = 29/46 (63%) Frame = -3 Query: 502 LDRMVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL 365 +D +VDP +KG Y A++L R +V C++ +RP M ++V+ L Sbjct: 823 VDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVREL 868
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 36.6 bits (83), Expect = 0.043 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = -3 Query: 496 RMVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL 365 +++D +KG Y K + A + C++ +P+ RP M EVV+ L Sbjct: 322 QIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVL 365
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 33.1 bits (74), Expect = 0.48 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -3 Query: 493 MVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL 365 +VDP L G YP S+ + +CV+ E RP M EVV L Sbjct: 926 IVDPRLTG-YPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -3 Query: 496 RMVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQALVRL 356 R++DP L+G Y + A + C+ + + RP M+E+V+ + L Sbjct: 307 RVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEEL 353
>TOPK_BRARE (Q6DHU8) T-lymphokine-activated killer cell-originated protein| kinase homolog (EC 2.7.12.2) (PDZ-binding kinase) Length = 339 Score = 30.8 bits (68), Expect = 2.4 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -3 Query: 484 PALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL 365 PAL + S R ++ LC + +P+ RP + +VQ L Sbjct: 283 PALDAVTLGGSYQRMVELFCLCTEEDPQKRPSAAHIVQVL 322
>CCNH_HUMAN (P51946) Cyclin-H (MO15-associated protein) (p37) (p34)| Length = 323 Score = 30.4 bits (67), Expect = 3.1 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = -3 Query: 451 LSRFADVLALCVQAEPEFRPPMSEVVQALVRLVQRANMTKKMLDGDASRRGDDQDQDFI* 272 LS+ D++ ++ PP SE V L + ++R + + L+ +R +D D++ Sbjct: 245 LSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDYVS 304 Query: 271 WKHNH 257 K H Sbjct: 305 KKSKH 309
>PHSH_WHEAT (Q9LKJ3) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch| phosphorylase H) Length = 832 Score = 30.0 bits (66), Expect = 4.0 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +2 Query: 236 DIRGYIRVVVLPSYEILVLVIASPGSVAIEH 328 D+ Y++VV +P+Y + V + PGS +H Sbjct: 633 DVNKYLKVVFIPNYNVSVAEVLIPGSELSQH 663
>KAD6_METKA (Q8TWH4) Putative adenylate kinase (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 190 Score = 30.0 bits (66), Expect = 4.0 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = -3 Query: 475 KGLYPAKSLSRF-ADVLALC------VQAEPEFRPPMSEVVQALVRLVQRANMTKKMLDG 317 KG P K A+ + +C V++E F P +V+Q V + RA ++L+ Sbjct: 103 KGYPPEKIAENLEAEFVGVCYGEAVEVRSEGCFIRPPEDVIQVNVTGLSRAEAADRVLEA 162 Query: 316 DASRRGDDQD 287 RRGDD D Sbjct: 163 VNHRRGDDVD 172
>UPPP2_AGRT5 (P58741) Undecaprenyl-diphosphatase 2 (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase 2) (Bacitracin resistance protein 2) Length = 278 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -1 Query: 147 VLFRQYISHRFRLIYYTQVLVVLFGCVMSTNQRPG 43 + F+ I H R +Y T V++++FG V+ R G Sbjct: 106 LFFKDAIEHSLRNLYITAVMLIVFGIVLGLADRIG 140
>LIMK2_CHICK (P53666) LIM domain kinase 2 (EC 2.7.11.1) (LIMK-2)| Length = 642 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = -3 Query: 514 DIDALDRMVDPAL------KGLYPAKSLSRFADVLALCVQAEPEFRPPMSEV 377 D D L R +D L + PA F + A+C + EPE RPP S++ Sbjct: 546 DPDCLPRTLDFGLNVKLFWEKFVPADCPPAFFPLAAICCRLEPESRPPFSKL 597
>DXR_PSEPK (Q88MH4) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 400 Score = 29.3 bits (64), Expect = 6.9 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -3 Query: 448 SRFADVLALCVQAEPEFR-PPMSEVVQALVRLVQRANMTKKMLDGDA 311 SR ++LALCV+ P F P +E L + A T ++L+G+A Sbjct: 44 SRIDELLALCVRHRPAFAVVPSTEAAVRLRASLAAAGCTTEVLEGEA 90
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -3 Query: 496 RMVDPALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL 365 R++D L+ Y + + A + C+ E + RP MSEVV L Sbjct: 307 RVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHL 350
>MIS4_SCHPO (Q09725) Sister chromatid cohesion protein mis4 (SCC2 homolog)| Length = 1583 Score = 29.3 bits (64), Expect = 6.9 Identities = 21/84 (25%), Positives = 40/84 (47%) Frame = -3 Query: 445 RFADVLALCVQAEPEFRPPMSEVVQALVRLVQRANMTKKMLDGDASRRGDDQDQDFI*WK 266 R ++ C+++ E R + Q +VRL+ + + GD +R DD WK Sbjct: 1118 RLKKIVVSCLKSLEEARHSENNF-QKMVRLIDLIGLFSRY--GDLNRINDD-------WK 1167 Query: 265 HNHSNISPDIAASEIVFVYFF*RL 194 H+ ISP+ + ++ + +F +L Sbjct: 1168 HSLDFISPECDDAYVILLGYFQKL 1191
>PHSH_SOLTU (P32811) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch| phosphorylase H) Length = 838 Score = 29.3 bits (64), Expect = 6.9 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +2 Query: 236 DIRGYIRVVVLPSYEILVLVIASPGSVAIEH 328 D+ Y++VV +P+Y + V + PGS +H Sbjct: 639 DVNDYLKVVFVPNYNVSVAEMLIPGSELSQH 669
>JAK2_RAT (Q62689) Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2)| (JAK-2) Length = 1132 Score = 29.3 bits (64), Expect = 6.9 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Frame = -3 Query: 463 PAKSLSRFADVLALCVQAEPEFRPPMSEVVQAL-------VRLVQRANMTKKMLDGDASR 305 PA + A+++ C+ EP+FRP V++ L L+ +M M G Sbjct: 773 PAPKWTELANLINTCMDYEPDFRPAFRAVIRDLNSLFTPDYELLTENDMLPNMRIGALGF 832 Query: 304 RGDDQDQDFI*WKHNH 257 G +D+D ++ H Sbjct: 833 SGAFEDRDPTQFEERH 848
>FATH_HUMAN (Q14517) Cadherin-related tumor suppressor homolog precursor (Protein| fat homolog) Length = 4590 Score = 28.9 bits (63), Expect = 9.0 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = -3 Query: 493 MVDPALKGLYPAKSLSRFADV-LALCVQAEPEFRPPMSEVVQALVRLVQRANMTKKMLDG 317 M+DP L + AK L R L V+A + PPMSE+ + + N + K Sbjct: 1614 MIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSK 1673 Query: 316 DAS 308 + S Sbjct: 1674 EYS 1676
>PHSH_VICFA (P53537) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch| phosphorylase H) Length = 842 Score = 28.9 bits (63), Expect = 9.0 Identities = 10/31 (32%), Positives = 19/31 (61%) Frame = +2 Query: 236 DIRGYIRVVVLPSYEILVLVIASPGSVAIEH 328 ++ Y++VV +P+Y + V + PGS +H Sbjct: 643 EVNSYLKVVFVPNYNVSVAEVLIPGSELSQH 673
>STK24_MOUSE (Q99KH8) Serine/threonine-protein kinase 24 (EC 2.7.11.1)| Length = 431 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -3 Query: 484 PALKGLYPAKSLSRFADVLALCVQAEPEFRPPMSEVV--QALVRLVQRANMTKKMLDGDA 311 P L+G Y +K L F + C+ EP FRP E++ + ++R ++ + +++D Sbjct: 237 PTLEGNY-SKPLKEFVEA---CLNKEPSFRPTAKELLKHKFIIRNAKKTSYLTELIDRYK 292 Query: 310 SRRGDDQDQD 281 + + +D Sbjct: 293 RWKAEQSHED 302 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,749,720 Number of Sequences: 219361 Number of extensions: 1516853 Number of successful extensions: 4753 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4615 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4751 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
