ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25f19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470566.1| Oryza sativa (japonica cultivar-group), predic... 218 1e-53
2dbj|AK100621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
3dbj|AK112046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
4gb|AF023164.1|AF023164 Zea mays leucine-rich repeat transmembran... 188 1e-44
5ref|NM_196278.1| Oryza sativa (japonica cultivar-group) putative... 167 5e-38
6gb|AY224517.1| Oryza sativa (japonica cultivar-group) isolate 20... 167 5e-38
7dbj|AK111516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
8gb|AY109511.1| Zea mays CL1762_1 mRNA sequence 161 3e-36
9gb|AF023165.1|AF023165 Zea mays leucine-rich repeat transmembran... 161 3e-36
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 141 3e-30
11gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 141 3e-30
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
13gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 94 5e-16
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 94 5e-16
16ref|XM_470876.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-14
17dbj|AK111995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
18dbj|AK111635.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
19gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 76 1e-10
20gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 76 1e-10
21ref|NM_189831.1| Oryza sativa (japonica cultivar-group), mRNA 74 5e-10
22gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome... 74 5e-10
23dbj|AK111826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
24dbj|AK111671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
26dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
27dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
28dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
29gb|AC135796.25| Medicago truncatula clone mth2-28b18, complete s... 52 0.002
30dbj|AP006733.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.45
31gb|AC006267.1| Arabidopsis thaliana BAC F9M13 from chromosome IV... 42 1.8
32emb|Z93931.1|HS438G17 Human DNA sequence from clone RP3-438G17 o... 42 1.8
33emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, ... 42 1.8
34emb|BX294180.9| Zebrafish DNA sequence from clone DKEYP-36F5 in ... 42 1.8
35emb|BX828431.1|CNS0A3VU Arabidopsis thaliana Full-length cDNA Co... 42 1.8
36emb|BX827626.1|CNS0A3N0 Arabidopsis thaliana Full-length cDNA Co... 42 1.8
37dbj|AK111551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
38gb|AC022682.16| Mus musculus chromosome 13, clone RP23-476E21, c... 40 7.1
39gb|AC133653.4| Mus musculus BAC clone RP24-320J12 from chromosom... 40 7.1
40emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chro... 40 7.1
41emb|CR656745.2|CNS0F5PR Tetraodon nigroviridis full-length cDNA 40 7.1
42emb|CR656179.2|CNS0F5A1 Tetraodon nigroviridis full-length cDNA 40 7.1
43emb|CR654462.2|CNS0F3YC Tetraodon nigroviridis full-length cDNA 40 7.1
44emb|CR654459.2|CNS0F3Y9 Tetraodon nigroviridis full-length cDNA 40 7.1
45emb|CR648125.2|CNS0EZ2B Tetraodon nigroviridis full-length cDNA 40 7.1
46emb|CR644110.2|CNS0EVYS Tetraodon nigroviridis full-length cDNA 40 7.1
47emb|CR641782.2|CNS0EU64 Tetraodon nigroviridis full-length cDNA 40 7.1
48emb|CR640513.2|CNS0ET6V Tetraodon nigroviridis full-length cDNA 40 7.1
49emb|CR640289.2|CNS0ET0N Tetraodon nigroviridis full-length cDNA 40 7.1
50emb|CR637383.2|CNS0EQRX Tetraodon nigroviridis full-length cDNA 40 7.1
51emb|CR637350.2|CNS0EQR0 Tetraodon nigroviridis full-length cDNA 40 7.1
52emb|CR633760.2|CNS0ENZA Tetraodon nigroviridis full-length cDNA 40 7.1
53gb|AC158781.4| Mus musculus chromosome 7, clone RP23-264H19, com... 40 7.1
54emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, stra... 40 7.1
55ref|XM_702967.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.1
56ref|XM_702966.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.1
57ref|XM_702965.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.1
58ref|XM_702964.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.1
59ref|XM_702963.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.1
60ref|XM_680531.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.1
61emb|BX828170.1|CNS0A2FW Arabidopsis thaliana Full-length cDNA Co... 40 7.1
62emb|AJ851165.1| Bdellovibrio bacteriovorus fliC1 gene for flagel... 40 7.1 
>ref|XM_470566.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2157

 Score =  218 bits (110), Expect = 1e-53
 Identities = 179/202 (88%)
 Strand = Plus / Minus

                                                                        
Query: 321  tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 380
            ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 2105 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 2046

                                                                        
Query: 381  tccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcg 440
            || ||||| |||||||||||||| || |||| |||||||||||| || ||||||||||| 
Sbjct: 2045 tctgacattggtggcctgaattctggttcaggctggacacacaaagcgagcacgtcggca 1986

                                                                        
Query: 441  aatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatcctgtcc 500
            || || || |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1985 aaccgggagagagacttggcagggtacagacccttcagcgcaggatcgaccattctgtcc 1926

                                  
Query: 501  aacgcatcgatgtcgtggagct 522
            || ||||||||||| |||||||
Sbjct: 1925 aatgcatcgatgtcatggagct 1904
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>dbj|AK100621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F23, full
            insert sequence
          Length = 2637

 Score =  218 bits (110), Expect = 1e-53
 Identities = 179/202 (88%)
 Strand = Plus / Minus

                                                                        
Query: 321  tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 380
            ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 2337 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 2278

                                                                        
Query: 381  tccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcg 440
            || ||||| |||||||||||||| || |||| |||||||||||| || ||||||||||| 
Sbjct: 2277 tctgacattggtggcctgaattctggttcaggctggacacacaaagcgagcacgtcggca 2218

                                                                        
Query: 441  aatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatcctgtcc 500
            || || || |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 2217 aaccgggagagagacttggcagggtacagacccttcagcgcaggatcgaccattctgtcc 2158

                                  
Query: 501  aacgcatcgatgtcgtggagct 522
            || ||||||||||| |||||||
Sbjct: 2157 aatgcatcgatgtcatggagct 2136
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>dbj|AK112046.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C09, full
            insert sequence
          Length = 1721

 Score =  210 bits (106), Expect = 3e-51
 Identities = 172/194 (88%)
 Strand = Plus / Minus

                                                                        
Query: 321  tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 380
            ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 1426 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 1367

                                                                        
Query: 381  tccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcg 440
            || ||||| |||||||||||||| || |||| |||||||||||| || ||||||||||| 
Sbjct: 1366 tctgacattggtggcctgaattctggttcaggctggacacacaaagcgagcacgtcggca 1307

                                                                        
Query: 441  aatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatcctgtcc 500
            || || || |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1306 aaccgggagagagacttggcagggtacagacccttcagcgcaggatcgaccattctgtcc 1247

                          
Query: 501  aacgcatcgatgtc 514
            || |||||||||||
Sbjct: 1246 aatgcatcgatgtc 1233
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>gb|AF023164.1|AF023164 Zea mays leucine-rich repeat transmembrane protein kinase 1 (ltk1)
            mRNA, partial cds
          Length = 2310

 Score =  188 bits (95), Expect = 1e-44
 Identities = 206/243 (84%)
 Strand = Plus / Minus

                                                                        
Query: 272  tcatatgaaatcctggtcctggtcatcgcctcgccgggaagcgtcgccatcgagcatttt 331
            |||||||||||| |||||| |||||||   |||||| ||||  || ||||| |||||  |
Sbjct: 2057 tcatatgaaatcttggtccaggtcatctggtcgccgagaagtatccccatcaagcatcct 1998

                                                                        
Query: 332  cttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcgg 391
            |||||||||||| ||||||||||| || || ||||  || ||||||||||| ||||| ||
Sbjct: 1997 cttcgtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattgg 1938

                                                                        
Query: 392  tggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaag 451
            |||||||||||| || |||| ||||||||||| |||||| || || || ||||| || ||
Sbjct: 1937 tggcctgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatag 1878

                                                                        
Query: 452  agacttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgat 511
            ||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 1877 agatttggctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgat 1818

               
Query: 512  gtc 514
            |||
Sbjct: 1817 gtc 1815
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>ref|NM_196278.1| Oryza sativa (japonica cultivar-group) putative leucine-rich repeat
            transmembrane protein kinase 1 (OSJNBb0061I18.16), mRNA
          Length = 2211

 Score =  167 bits (84), Expect = 5e-38
 Identities = 171/200 (85%)
 Strand = Plus / Minus

                                                                        
Query: 315  tcgccatcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 374
            ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 2165 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 2106

                                                                        
Query: 375  accacctccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacg 434
            |||||||| |||||||| || ||||| |||||||||| |||||||||||  ||||  |||
Sbjct: 2105 accacctcagacatcggcggtctgaactccggctcaggctggacacacagcgcaatgacg 2046

                                                                        
Query: 435  tcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatc 494
            || ||||| || || || || |||||||||||||| ||||||||||| || |||||||||
Sbjct: 2045 tctgcgaaacgggacagggatttggcagggtacaggcccttgagcgctgggtcgaccatc 1986

                                
Query: 495  ctgtccaacgcatcgatgtc 514
            | ||||||||||||||||||
Sbjct: 1985 cggtccaacgcatcgatgtc 1966
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>gb|AY224517.1| Oryza sativa (japonica cultivar-group) isolate 20144 putative
            leucine-rich repeat transmembrane protein kinase mRNA,
            complete cds
          Length = 2202

 Score =  167 bits (84), Expect = 5e-38
 Identities = 171/200 (85%)
 Strand = Plus / Minus

                                                                        
Query: 315  tcgccatcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 374
            ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 2156 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 2097

                                                                        
Query: 375  accacctccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacg 434
            |||||||| |||||||| || ||||| |||||||||| |||||||||||  ||||  |||
Sbjct: 2096 accacctcagacatcggcggtctgaactccggctcaggctggacacacagcgcaatgacg 2037

                                                                        
Query: 435  tcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatc 494
            || ||||| || || || || |||||||||||||| ||||||||||| || |||||||||
Sbjct: 2036 tctgcgaaacgggacagggatttggcagggtacaggcccttgagcgctgggtcgaccatc 1977

                                
Query: 495  ctgtccaacgcatcgatgtc 514
            | ||||||||||||||||||
Sbjct: 1976 cggtccaacgcatcgatgtc 1957
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>dbj|AK111516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F24, full
            insert sequence
          Length = 2433

 Score =  167 bits (84), Expect = 5e-38
 Identities = 171/200 (85%)
 Strand = Plus / Minus

                                                                        
Query: 315  tcgccatcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 374
            ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 2175 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 2116

                                                                        
Query: 375  accacctccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacg 434
            |||||||| |||||||| || ||||| |||||||||| |||||||||||  ||||  |||
Sbjct: 2115 accacctcagacatcggcggtctgaactccggctcaggctggacacacagcgcaatgacg 2056

                                                                        
Query: 435  tcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatc 494
            || ||||| || || || || |||||||||||||| ||||||||||| || |||||||||
Sbjct: 2055 tctgcgaaacgggacagggatttggcagggtacaggcccttgagcgctgggtcgaccatc 1996

                                
Query: 495  ctgtccaacgcatcgatgtc 514
            | ||||||||||||||||||
Sbjct: 1995 cggtccaacgcatcgatgtc 1976
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>gb|AY109511.1| Zea mays CL1762_1 mRNA sequence
          Length = 2393

 Score =  161 bits (81), Expect = 3e-36
 Identities = 168/197 (85%)
 Strand = Plus / Minus

                                                                        
Query: 318  ccatcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcacc 377
            ||||| |||||  ||||||||||||| ||||||||||| || || ||||  || ||||||
Sbjct: 2233 ccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaatgcttgcacc 2174

                                                                        
Query: 378  acctccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacgtcg 437
            ||||| ||||| |||||||||||||| || |||| ||||||||||| ||| || || || 
Sbjct: 2173 acctctgacattggtggcctgaattctggttcaggctggacacacagggcgaggacatca 2114

                                                                        
Query: 438  gcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatcctg 497
            || ||||| || ||||| ||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 2113 gcaaatcgggatagagatttggctgggtatagacccttgagtgcaggatcgaccattctg 2054

                             
Query: 498  tccaacgcatcgatgtc 514
            ||||| |||||||||||
Sbjct: 2053 tccaatgcatcgatgtc 2037
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>gb|AF023165.1|AF023165 Zea mays leucine-rich repeat transmembrane protein kinase 2 (ltk2)
            mRNA, complete cds
          Length = 2388

 Score =  161 bits (81), Expect = 3e-36
 Identities = 168/197 (85%)
 Strand = Plus / Minus

                                                                        
Query: 318  ccatcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcacc 377
            ||||| |||||  ||||||||||||| ||||||||||| || || ||||  || ||||||
Sbjct: 2228 ccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaatgcttgcacc 2169

                                                                        
Query: 378  acctccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacgtcg 437
            ||||| ||||| |||||||||||||| || |||| ||||||||||| ||| || || || 
Sbjct: 2168 acctctgacattggtggcctgaattctggttcaggctggacacacagggcgaggacatca 2109

                                                                        
Query: 438  gcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatcctg 497
            || ||||| || ||||| ||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 2108 gcaaatcgggatagagatttggctgggtatagacccttgagtgcaggatcgaccattctg 2049

                             
Query: 498  tccaacgcatcgatgtc 514
            ||||| |||||||||||
Sbjct: 2048 tccaatgcatcgatgtc 2032
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                           
Query: 412     cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 471
               ||||||||||||| || ||||||||||| || || || ||||||||||||||||||||||
Sbjct: 4384120 cctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagac 4384061

                                                                  
Query: 472     ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagct 522
               |||| ||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 4384060 ccttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagct 4384010



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                           
Query: 321     tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 380
               ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 4384310 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 4384251

                                      
Query: 381     tccgacatcggtggcctgaattc 403
               || ||||| ||||||||||||||
Sbjct: 4384250 tctgacattggtggcctgaattc 4384228



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 347      cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 406
                |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 15911391 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 15911450

                     
Query: 407      ctcag 411
                |||||
Sbjct: 15911451 ctcag 15911455
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>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                         
Query: 412   cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 471
             ||||||||||||| || ||||||||||| || || || ||||||||||||||||||||||
Sbjct: 42377 cctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagac 42436

                                                                
Query: 472   ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagct 522
             |||| ||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 42437 ccttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagct 42487



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                         
Query: 321   tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 380
             ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 42187 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 42246

                                    
Query: 381   tccgacatcggtggcctgaattc 403
             || ||||| ||||||||||||||
Sbjct: 42247 tctgacattggtggcctgaattc 42269
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                           
Query: 412     cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 471
               ||||||||||||| || ||||||||||| || || || ||||||||||||||||||||||
Sbjct: 4384235 cctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagac 4384176

                                                                  
Query: 472     ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagct 522
               |||| ||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 4384175 ccttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagct 4384125



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                           
Query: 321     tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 380
               ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 4384425 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 4384366

                                      
Query: 381     tccgacatcggtggcctgaattc 403
               || ||||| ||||||||||||||
Sbjct: 4384365 tctgacattggtggcctgaattc 4384343



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 347      cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 406
                |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 15905925 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 15905984

                     
Query: 407      ctcag 411
                |||||
Sbjct: 15905985 ctcag 15905989
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>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBb0061I18, complete sequence
          Length = 143163

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                         
Query: 412   cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 471
             ||||||||||||  ||||  ||||| ||||| || || || || |||||||||||||| |
Sbjct: 97164 cctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggc 97105

                                                        
Query: 472   ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtc 514
             |||||||||| || |||||||||| ||||||||||||||||||
Sbjct: 97104 ccttgagcgctgggtcgaccatccggtccaacgcatcgatgtc 97062



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 315   tcgccatcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 374
             ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 97361 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 97302

                                                  
Query: 375   accacctccgacatcggtggcctgaattccggctcag 411
             |||||||| |||||||| || ||||| ||||||||||
Sbjct: 97301 accacctcagacatcggcggtctgaactccggctcag 97265
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                            
Query: 412      cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 471
                ||||||||||||  ||||  ||||| ||||| || || || || |||||||||||||| |
Sbjct: 12407011 cctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggc 12407070

                                                           
Query: 472      ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtc 514
                |||||||||| || |||||||||| ||||||||||||||||||
Sbjct: 12407071 ccttgagcgctgggtcgaccatccggtccaacgcatcgatgtc 12407113



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                            
Query: 315      tcgccatcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 374
                ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 12406814 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 12406873

                                                     
Query: 375      accacctccgacatcggtggcctgaattccggctcag 411
                |||||||| |||||||| || ||||| ||||||||||
Sbjct: 12406874 accacctcagacatcggcggtctgaactccggctcag 12406910
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                            
Query: 412      cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 471
                ||||||||||||  ||||  ||||| ||||| || || || || |||||||||||||| |
Sbjct: 12414351 cctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggc 12414410

                                                           
Query: 472      ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtc 514
                |||||||||| || |||||||||| ||||||||||||||||||
Sbjct: 12414411 ccttgagcgctgggtcgaccatccggtccaacgcatcgatgtc 12414453



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                            
Query: 315      tcgccatcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 374
                ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 12414154 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 12414213

                                                     
Query: 375      accacctccgacatcggtggcctgaattccggctcag 411
                |||||||| |||||||| || ||||| ||||||||||
Sbjct: 12414214 accacctcagacatcggcggtctgaactccggctcag 12414250
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>ref|XM_470876.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2272

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 137/168 (81%)
 Strand = Plus / Minus

                                                                        
Query: 347  cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 406
            |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 2184 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 2125

                                                                        
Query: 407  ctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggta 466
            ||||| ||||||||| |  || |   ||||||||||||| || || || || ||||||||
Sbjct: 2124 ctcaggctggacacagagcgcgattgcgtcggcgaatcgagagagggattttgcagggta 2065

                                                            
Query: 467  cagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtc 514
            ||| || |  || || ||||| ||||||   || ||||||||||||||
Sbjct: 2064 cagtccttccagtgctggatctaccatctgatctaacgcatcgatgtc 2017
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>dbj|AK111995.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G05, full
            insert sequence
          Length = 1758

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 137/168 (81%)
 Strand = Plus / Minus

                                                                        
Query: 347  cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 406
            |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 1461 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 1402

                                                                        
Query: 407  ctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggta 466
            ||||| ||||||||| |  || |   ||||||||||||| || || || || ||||||||
Sbjct: 1401 ctcaggctggacacagagcgcgattgcgtcggcgaatcgagagagggattttgcagggta 1342

                                                            
Query: 467  cagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtc 514
            ||| || |  || || ||||| ||||||   || ||||||||||||||
Sbjct: 1341 cagtccttccagtgctggatctaccatctgatctaacgcatcgatgtc 1294
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>dbj|AK111635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119H22, full
            insert sequence
          Length = 2638

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 137/168 (81%)
 Strand = Plus / Minus

                                                                        
Query: 347  cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 406
            |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 2265 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 2206

                                                                        
Query: 407  ctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggta 466
            ||||| ||||||||| |  || |   ||||||||||||| || || || || ||||||||
Sbjct: 2205 ctcaggctggacacagagcgcgattgcgtcggcgaatcgagagagggattttgcagggta 2146

                                                            
Query: 467  cagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtc 514
            ||| || |  || || ||||| ||||||   || ||||||||||||||
Sbjct: 2145 cagtccttccagtgctggatctaccatctgatctaacgcatcgatgtc 2098
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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                          
Query: 334    tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
              |||||||||| ||||||||||| || || ||||||| |||||| |||||||||||||| |
Sbjct: 173478 tcgtcatgttcgccctctgcaccaggcgcaccagcgactgcacgacctccgacatcggcg 173419

                                
Query: 394    gcctgaattccggctcag 411
              |||  || ||||||||||
Sbjct: 173418 gccgaaactccggctcag 173401
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>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                          
Query: 334    tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
              |||||||||| ||||||||||| || || ||||||| |||||| |||||||||||||| |
Sbjct: 161580 tcgtcatgttcgccctctgcaccaggcgcaccagcgactgcacgacctccgacatcggcg 161521

                                
Query: 394    gcctgaattccggctcag 411
              |||  || ||||||||||
Sbjct: 161520 gccgaaactccggctcag 161503
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>ref|NM_189831.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2163

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 151/189 (79%)
 Strand = Plus / Minus

                                                                        
Query: 334  tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
            |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 2095 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 2036

                                                                        
Query: 394  gcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagag 453
            ||||||| ||||| || | ||| || || |  || | | |||| ||||| || || || |
Sbjct: 2035 gcctgaactccggttcggactgaacgcagagcgcgatcgcgtcagcgaagcgggagagcg 1976

                                                                        
Query: 454  acttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgt 513
            | || | ||||||||| |||| ||| ||||| |||||||||  |||||| || |||||||
Sbjct: 1975 atttcgaagggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgt 1916

                     
Query: 514  cgtggagct 522
            |||| ||||
Sbjct: 1915 cgtgcagct 1907
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>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11,
              complete sequence
          Length = 169728

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                          
Query: 347    cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 406
              |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 139026 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 138967

                   
Query: 407    ctcag 411
              |||||
Sbjct: 138966 ctcag 138962
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>dbj|AK111826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061M23, full
            insert sequence
          Length = 3008

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 151/189 (79%)
 Strand = Plus / Minus

                                                                        
Query: 334  tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
            |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 2698 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 2639

                                                                        
Query: 394  gcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagag 453
            ||||||| ||||| || | ||| || || |  || | | |||| ||||| || || || |
Sbjct: 2638 gcctgaactccggttcggactgaacgcagagcgcgatcgcgtcagcgaagcgggagagcg 2579

                                                                        
Query: 454  acttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgt 513
            | || | ||||||||| |||| ||| ||||| |||||||||  |||||| || |||||||
Sbjct: 2578 atttcgaagggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgt 2519

                     
Query: 514  cgtggagct 522
            |||| ||||
Sbjct: 2518 cgtgcagct 2510
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>dbj|AK111671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154F15, full
            insert sequence
          Length = 2732

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 151/189 (79%)
 Strand = Plus / Minus

                                                                        
Query: 334  tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
            |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 2393 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 2334

                                                                        
Query: 394  gcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagag 453
            ||||||| ||||| || | ||| || || |  || | | |||| ||||| || || || |
Sbjct: 2333 gcctgaactccggttcggactgaacgcagagcgcgatcgcgtcagcgaagcgggagagcg 2274

                                                                        
Query: 454  acttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgt 513
            | || | ||||||||| |||| ||| ||||| |||||||||  |||||| || |||||||
Sbjct: 2273 atttcgaagggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgt 2214

                     
Query: 514  cgtggagct 522
            |||| ||||
Sbjct: 2213 cgtgcagct 2205
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                            
Query: 334      tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
                |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 25469263 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 25469204

                             
Query: 394      gcctgaattccgg 406
                ||||||| |||||
Sbjct: 25469203 gcctgaactccgg 25469191



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                            
Query: 461      agggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggag 520
                ||||||||| |||| ||| ||||| |||||||||  |||||| || ||||||||||| ||
Sbjct: 25468998 agggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcag 25468939

                  
Query: 521      ct 522
                ||
Sbjct: 25468938 ct 25468937
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>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1056G08
          Length = 168173

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                          
Query: 334    tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
              |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 162353 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 162294

                           
Query: 394    gcctgaattccgg 406
              ||||||| |||||
Sbjct: 162293 gcctgaactccgg 162281



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                          
Query: 461    agggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggag 520
              ||||||||| |||| ||| ||||| |||||||||  |||||| || ||||||||||| ||
Sbjct: 162088 agggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcag 162029

                
Query: 521    ct 522
              ||
Sbjct: 162028 ct 162027
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>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0560B08
          Length = 128098

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 334  tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
            |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 6533 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 6474

                         
Query: 394  gcctgaattccgg 406
            ||||||| |||||
Sbjct: 6473 gcctgaactccgg 6461



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 461  agggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggag 520
            ||||||||| |||| ||| ||||| |||||||||  |||||| || ||||||||||| ||
Sbjct: 6268 agggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcag 6209

              
Query: 521  ct 522
            ||
Sbjct: 6208 ct 6207
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>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0552F09
          Length = 134659

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                         
Query: 334   tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 393
             |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 92980 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 92921

                          
Query: 394   gcctgaattccgg 406
             ||||||| |||||
Sbjct: 92920 gcctgaactccgg 92908



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                         
Query: 461   agggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggag 520
             ||||||||| |||| ||| ||||| |||||||||  |||||| || ||||||||||| ||
Sbjct: 92715 agggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcag 92656

               
Query: 521   ct 522
             ||
Sbjct: 92655 ct 92654
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>gb|AC135796.25| Medicago truncatula clone mth2-28b18, complete sequence
          Length = 118959

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 435   tcggcgaatcgtgaaagagacttggcagggtaca 468
             ||||||||||| |||||||||||| |||||||||
Sbjct: 52829 tcggcgaatcgagaaagagacttgacagggtaca 52796
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>dbj|AP006733.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918b,
             complete sequence
          Length = 41851

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                         
Query: 337   tcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcc 396
             |||||||||| | |||||| |  || ||||||||||| ||||| || ||||| ||||| |
Sbjct: 38113 tcatgttagctcgctgcactaatcgtaccagcgcctgaaccacttctgacatgggtggtc 38054

                           
Query: 397   tgaattccggctca 410
              |||||| ||||||
Sbjct: 38053 ggaattcgggctca 38040
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>gb|AC006267.1| Arabidopsis thaliana BAC F9M13 from chromosome IV near 21.5 cM,
             complete sequence
          Length = 101644

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 321   tcgagcattttcttcgtcatg 341
             |||||||||||||||||||||
Sbjct: 77696 tcgagcattttcttcgtcatg 77676
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>emb|Z93931.1|HS438G17 Human DNA sequence from clone RP3-438G17 on chromosome 6q22 Contains a
             high mobility group protein pseudogene, complete sequence
          Length = 148198

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   tagaagaaataaacgaataca 221
             |||||||||||||||||||||
Sbjct: 42167 tagaagaaataaacgaataca 42147
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>emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 22
          Length = 198131

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 321   tcgagcattttcttcgtcatg 341
             |||||||||||||||||||||
Sbjct: 51343 tcgagcattttcttcgtcatg 51363
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>emb|BX294180.9| Zebrafish DNA sequence from clone DKEYP-36F5 in linkage group 5,
            complete sequence
          Length = 69889

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 209  ataaacgaatacaatctcagatgct 233
            ||||||||||||||| |||||||||
Sbjct: 6014 ataaacgaatacaatttcagatgct 5990
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>emb|BX828431.1|CNS0A3VU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH89ZH03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1909

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 321  tcgagcattttcttcgtcatg 341
            |||||||||||||||||||||
Sbjct: 1478 tcgagcattttcttcgtcatg 1458
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>emb|BX827626.1|CNS0A3N0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS87ZB03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1910

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 321  tcgagcattttcttcgtcatg 341
            |||||||||||||||||||||
Sbjct: 1456 tcgagcattttcttcgtcatg 1436
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>dbj|AK111551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050P20, full
            insert sequence
          Length = 2844

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                        
Query: 345  gccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattcc 404
            ||||||||||| || || |||||   ||| || ||||| ||||||||||| | ||| |||
Sbjct: 2356 gccctctgcaccaggcgcaccagttgctggacaacctcggacatcggtggacggaactcc 2297

                                     
Query: 405  ggctcagcctggacacacaaggcaa 429
            || || | |||||||||||| ||||
Sbjct: 2296 ggttcgggctggacacacaatgcaa 2272
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>gb|AC022682.16| Mus musculus chromosome 13, clone RP23-476E21, complete sequence
          Length = 183905

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    gctaggcgctagaagaaata 211
              ||||||||||||||||||||
Sbjct: 146233 gctaggcgctagaagaaata 146252
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>gb|AC133653.4| Mus musculus BAC clone RP24-320J12 from chromosome 7, complete sequence
          Length = 144233

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   acagacccttgagcgcagga 485
             ||||||||||||||||||||
Sbjct: 58255 acagacccttgagcgcagga 58236
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>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete
             sequence
          Length = 217752

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   gctaggcgctagaagaaata 211
             ||||||||||||||||||||
Sbjct: 35567 gctaggcgctagaagaaata 35586
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>emb|CR656745.2|CNS0F5PR Tetraodon nigroviridis full-length cDNA
          Length = 949

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 168 atcctggtcctggtcatcgc 187
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>emb|CR656179.2|CNS0F5A1 Tetraodon nigroviridis full-length cDNA
          Length = 951

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 177 atcctggtcctggtcatcgc 196
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>emb|CR654462.2|CNS0F3YC Tetraodon nigroviridis full-length cDNA
          Length = 935

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 154 atcctggtcctggtcatcgc 173
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>emb|CR654459.2|CNS0F3Y9 Tetraodon nigroviridis full-length cDNA
          Length = 948

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 168 atcctggtcctggtcatcgc 187
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>emb|CR648125.2|CNS0EZ2B Tetraodon nigroviridis full-length cDNA
          Length = 925

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 154 atcctggtcctggtcatcgc 173
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>emb|CR644110.2|CNS0EVYS Tetraodon nigroviridis full-length cDNA
          Length = 714

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 169 atcctggtcctggtcatcgc 188
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>emb|CR641782.2|CNS0EU64 Tetraodon nigroviridis full-length cDNA
          Length = 927

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 154 atcctggtcctggtcatcgc 173
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>emb|CR640513.2|CNS0ET6V Tetraodon nigroviridis full-length cDNA
          Length = 878

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 166 atcctggtcctggtcatcgc 185
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>emb|CR640289.2|CNS0ET0N Tetraodon nigroviridis full-length cDNA
          Length = 951

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 180 atcctggtcctggtcatcgc 199
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>emb|CR637383.2|CNS0EQRX Tetraodon nigroviridis full-length cDNA
          Length = 934

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 156 atcctggtcctggtcatcgc 175
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>emb|CR637350.2|CNS0EQR0 Tetraodon nigroviridis full-length cDNA
          Length = 670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 165 atcctggtcctggtcatcgc 184
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>emb|CR633760.2|CNS0ENZA Tetraodon nigroviridis full-length cDNA
          Length = 925

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 atcctggtcctggtcatcgc 300
           ||||||||||||||||||||
Sbjct: 154 atcctggtcctggtcatcgc 173
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>gb|AC158781.4| Mus musculus chromosome 7, clone RP23-264H19, complete sequence
          Length = 208419

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    acagacccttgagcgcagga 485
              ||||||||||||||||||||
Sbjct: 101045 acagacccttgagcgcagga 101026
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>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11
          Length = 346357

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    ccatcgagcattttcttcgt 337
              ||||||||||||||||||||
Sbjct: 212837 ccatcgagcattttcttcgt 212818
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>ref|XM_702967.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript
            variant 6 (LOC402838), mRNA
          Length = 3835

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  gaagaaataaacgaatacaa 222
            ||||||||||||||||||||
Sbjct: 2939 gaagaaataaacgaatacaa 2958
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>ref|XM_702966.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript
            variant 5 (LOC402838), mRNA
          Length = 3796

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  gaagaaataaacgaatacaa 222
            ||||||||||||||||||||
Sbjct: 2900 gaagaaataaacgaatacaa 2919
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>ref|XM_702965.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript
            variant 4 (LOC402838), mRNA
          Length = 3706

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  gaagaaataaacgaatacaa 222
            ||||||||||||||||||||
Sbjct: 2810 gaagaaataaacgaatacaa 2829
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>ref|XM_702964.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript
            variant 3 (LOC402838), mRNA
          Length = 3526

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  gaagaaataaacgaatacaa 222
            ||||||||||||||||||||
Sbjct: 2630 gaagaaataaacgaatacaa 2649
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>ref|XM_702963.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript
           variant 2 (LOC402838), mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 gaagaaataaacgaatacaa 222
           ||||||||||||||||||||
Sbjct: 601 gaagaaataaacgaatacaa 620
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>ref|XM_680531.1| PREDICTED: Danio rerio hypothetical protein LOC402838, transcript
            variant 1 (LOC402838), mRNA
          Length = 3883

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  gaagaaataaacgaatacaa 222
            ||||||||||||||||||||
Sbjct: 2987 gaagaaataaacgaatacaa 3006
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>emb|BX828170.1|CNS0A2FW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH5ZC06 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1905

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  tcgagcattttcttcgtcat 340
            ||||||||||||||||||||
Sbjct: 1459 tcgagcattttcttcgtcat 1440
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>emb|AJ851165.1| Bdellovibrio bacteriovorus fliC1 gene for flagellin and tnBd gene
           for putative transposase
          Length = 2169

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ccatcgagcattttcttcgt 337
           ||||||||||||||||||||
Sbjct: 753 ccatcgagcattttcttcgt 734


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,301,648
Number of Sequences: 3902068
Number of extensions: 3301648
Number of successful extensions: 54860
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54641
Number of HSP's gapped (non-prelim): 213
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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