ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25f16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ019635.1| Triticum aestivum U2AF large subunit (U2AF65) mRN... 622 e-175
2dbj|AK066311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
3gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
4gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
7gb|AY111048.1| Zea mays CL3975_1 mRNA sequence 109 1e-20
8gb|AY103558.1| Zea mays PCO134114 mRNA sequence 101 3e-18
9gb|AY112521.1| Zea mays CL1839_9 mRNA sequence 72 2e-09
10emb|Y18351.1|NPL18351 Nicotiana plumbaginifolia mRNA for U2 snRN... 60 9e-06
11emb|Y18350.1|NPL18350 Nicotiana plumbaginifolia mRNA for U2 snRN... 60 9e-06
12gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb044... 60 9e-06
13gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, com... 60 9e-06
14ref|NM_104765.1| Arabidopsis thaliana RNA binding / nucleic acid... 56 1e-04
15ref|NM_104771.3| Arabidopsis thaliana RNA binding / nucleic acid... 56 1e-04
16gb|AY140014.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 56 1e-04
17gb|BT013617.1| Lycopersicon esculentum clone 132418R, mRNA sequence 52 0.002
18gb|AC174607.1| Lycopersicon esculentum, complete sequence 52 0.002
19gb|DQ019636.1| Triticum aestivum U2AF large subunit (U2AF65a) mR... 48 0.034
20gb|AC091851.2| Homo sapiens chromosome 5 clone CTD-2258D22, comp... 44 0.52
21gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete s... 44 0.52
22gb|AC079675.1|AC079675 Arabidopsis thaliana chromosome 1 BAC F23... 44 0.52
23gb|AC018908.8|AC018908 Arabidopsis thaliana chromosome 1 BAC T7P... 44 0.52
24gb|AC010368.4|AC010368 Homo sapiens chromosome 5 clone CTD-2046J... 44 0.52
25emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 ... 44 0.52
26emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 42 2.1
27gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
28emb|BX255892.3| Human DNA sequence from clone CTD-2176C4 on chro... 42 2.1
29gb|AC158769.2| Mus musculus chromosome 15, clone RP23-128J3, com... 42 2.1
30gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
31gb|AC120042.3| Homo sapiens chromosome 8, clone RP11-659E9, comp... 42 2.1
32gb|AC019357.7| Homo sapiens chromosome 8, clone RP11-687A13, com... 42 2.1
33dbj|AK073768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
34gb|AF147083.1|HSGGH3 Homo sapiens gamma-glutamyl hydrolase gene,... 42 2.1
35dbj|AK059255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
36gb|AC123606.11| Mus musculus chromosome 15, clone RP24-528D12, c... 42 2.1
37gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, com... 40 8.2
38gb|BC077314.1| Xenopus laevis ornithine aminotransferase (gyrate... 40 8.2
39gb|AC132104.3| Mus musculus BAC clone RP24-364N7 from chromosome... 40 8.2
40gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 8.2
41gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 8.2
42emb|CR974476.4| Mouse DNA sequence from clone RP24-469J5 on chro... 40 8.2
43gb|BC045249.1| Xenopus laevis ornithine aminotransferase, mRNA (... 40 8.2
44gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, compl... 40 8.2
45gb|AC102582.9| Mus musculus chromosome 9, clone RP23-312A24, com... 40 8.2
46emb|AL592207.9| Human DNA sequence from clone RP11-495P10 on chr... 40 8.2
47emb|AL138959.20| Human DNA sequence from clone RP11-214O11 on ch... 40 8.2
48emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome 40 8.2
49emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 8.2
50emb|CR788287.7| Mouse DNA sequence from clone RP23-362B9 on chro... 40 8.2
51emb|BX324204.32| Mouse DNA sequence from clone RP23-86F8 on chro... 40 8.2
52gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 40 8.2
53dbj|AK140724.1| Mus musculus adult male corpus striatum cDNA, RI... 40 8.2
54gb|AC091169.7| Homo sapiens chromosome 18, clone RP11-809A17, co... 40 8.2
55emb|CR318639.6| Mouse DNA sequence from clone RP23-317N11 on chr... 40 8.2
56emb|CR354442.5| Mouse DNA sequence from clone RP24-562O19 on chr... 40 8.2
57gb|AF232004.3| Pseudomonas syringae pv. tomato strain DC3000 Hrp... 40 8.2
58gb|AC023906.7|AC023906 Homo sapiens chromosome 15 clone CTD-2184... 40 8.2
59ref|NM_001028646.1| Caenorhabditis elegans Serpentine Receptor, ... 40 8.2
60ref|NM_001028647.1| Caenorhabditis elegans Serpentine Receptor, ... 40 8.2
61gb|BC040773.1| Mus musculus similar to LRRGT00085, mRNA (cDNA cl... 40 8.2
62gb|U53139.2| Caenorhabditis elegans cosmid F18E3, complete sequence 40 8.2
63emb|BX890623.6| Mouse DNA sequence from clone RP23-83O23 on chro... 40 8.2
64emb|BX813319.4| Mouse DNA sequence from clone RP23-54B12 on chro... 40 8.2
65gb|AY005479.1| Xenopus laevis ornithine aminotransferase (OAT) m... 40 8.2
66emb|BX682537.3| Mouse DNA sequence from clone RP23-376N23 on chr... 40 8.2
67emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, co... 40 8.2
68emb|BX511235.10| Mouse DNA sequence from clone RP23-232H13 on ch... 40 8.2
69emb|BX284639.15| Mouse DNA sequence from clone RP24-87L14 on chr... 40 8.2
70emb|AL845476.15| Mouse DNA sequence from clone RP23-355G16 on ch... 40 8.2
71emb|BX005149.16| Mouse DNA sequence from clone RP24-574J13 on ch... 40 8.2
72emb|CT010482.9| Mouse DNA sequence from clone RP23-282O12 on chr... 40 8.2
73emb|CR955031.3| Mouse DNA sequence from clone RP24-395K22 on chr... 40 8.2
74gb|U16118.1|PSU16118 Pseudomonas syringae pv. tomato avrE avirul... 40 8.2
75emb|BX284650.8| Human DNA sequence from clone RP6-206I17 on chro... 40 8.2
76emb|AL845456.11| Mouse DNA sequence from clone RP23-90C6 on chro... 40 8.2
77gb|U97505.1|PSU97505 Pseudomonas syringae avirulence protein (av... 40 8.2
78emb|CR848808.14| Mouse DNA sequence from clone RP23-442I10 on ch... 40 8.2
79emb|AL845494.3| Mouse DNA sequence from clone RP23-330D3 on chro... 40 8.2
80emb|AL845491.3| Mouse DNA sequence from clone RP23-360A2 on chro... 40 8.2 
>gb|DQ019635.1| Triticum aestivum U2AF large subunit (U2AF65) mRNA, complete cds
          Length = 1786

 Score =  622 bits (314), Expect = e-175
 Identities = 350/362 (96%)
 Strand = Plus / Minus

                                                                        
Query: 240  gcaatctatcttccaatattaataactggcggctctgcataaatccagggctacaagaaa 299
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1783 gcaatctatcttccaatattaataactggcggttctgcataaatccagggctacaagaaa 1724

                                                                        
Query: 300  gctcaactagaaggggaaacgttgctgtaaatcgaacgaactacacaaaacactattggc 359
            |||| |||||||||| ||||||||||||||||||||| ||||||| ||| |||||||| |
Sbjct: 1723 gctcgactagaagggaaaacgttgctgtaaatcgaacaaactacagaaagcactattgtc 1664

                                                                        
Query: 360  attggaaaagagagataatttatgctgccgcatcatagtcctcttcagcaaacttgttct 419
            ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 1663 attggaaaagagagataatttatgctgccgcgtcatagtcctcatcagcaaacttgttct 1604

                                                                        
Query: 420  cggggtagaagaccgcaacaactgggtttccaccaaatttccttccatgcatcgccgtct 479
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1603 cggggtagaagaccgcaacaactgggtttccaccgaatttccttccatgcatcgccgtct 1544

                                                                        
Query: 480  ttgctttggtggagccatcaacatctgcatactctaagaacacctttccaactccagaaa 539
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 ttgctttggtggaaccatcaacatctgcatactctaagaacacctttccaactccagaaa 1484

                                                                        
Query: 540  ctggctctccactcagatgagggcgcgggatgacaactttcaccaagttaccatatttcc 599
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 ctggctctccactcggatgagggcgcgggatgacaactttcaccaagttaccatatttcc 1424

              
Query: 600  ca 601
            ||
Sbjct: 1423 ca 1422
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>dbj|AK066311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068A09, full
            insert sequence
          Length = 2841

 Score =  168 bits (85), Expect = 1e-38
 Identities = 163/189 (86%)
 Strand = Plus / Minus

                                                                        
Query: 409  aaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttccatg 468
            |||||||||||| |||||||| || || |||||||| |||||||| || |||||||||||
Sbjct: 2706 aaacttgttctcagggtagaacactgcgacaactggatttccaccgaacttccttccatg 2647

                                                                        
Query: 469  catcgccgtctttgctttggtggagccatcaacatctgcatactctaagaacacctttcc 528
            ||| ||||||||||||||||||| ||| || |||||||||||||| ||||| ||||||||
Sbjct: 2646 cattgccgtctttgctttggtggcgccgtccacatctgcatactccaagaaaacctttcc 2587

                                                                        
Query: 529  aactccagaaactggctctccactcagatgagggcgcgggatgacaactttcaccaagtt 588
            |||||||| ||||||   ||||||  ||| |||||| ||||||||||| || | ||  ||
Sbjct: 2586 aactccagcaactggtaatccactaggatcagggcgagggatgacaaccttaatcagatt 2527

                     
Query: 589  accatattt 597
            |||||||||
Sbjct: 2526 accatattt 2518
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>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0064H09, complete sequence
          Length = 146742

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                         
Query: 409   aaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttccatg 468
             |||||||||||| |||||||| || ||||||||||| |||||||| || |||||||||||
Sbjct: 23869 aaacttgttctcagggtagaacactgcaacaactggatttccaccgaacttccttccatg 23810

                                                                     
Query: 469   catcgccgtctttgctttggtggagccatcaacatctgcatactctaagaacacct 524
             ||| ||||||||||||||||||| ||| || |||||||||||||| ||||| ||||
Sbjct: 23809 cattgccgtctttgctttggtggcgccgtccacatctgcatactccaagaaaacct 23754



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 521   acctttccaactccagaaactggctctccactcagatgagggcgcgggatgacaac 576
             |||||||||||||||| ||||||   ||||||  ||| |||||| |||||||||||
Sbjct: 23681 acctttccaactccagcaactggtaatccactaggatcagggcgagggatgacaac 23626
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>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0082P17, complete sequence
          Length = 157539

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                          
Query: 409    aaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttccatg 468
              |||||||||||| |||||||| || ||||||||||| |||||||| || |||||||||||
Sbjct: 131487 aaacttgttctcagggtagaacactgcaacaactggatttccaccgaacttccttccatg 131428

                                                                      
Query: 469    catcgccgtctttgctttggtggagccatcaacatctgcatactctaagaacacct 524
              ||| ||||||||||||||||||| ||| || |||||||||||||| ||||| ||||
Sbjct: 131427 cattgccgtctttgctttggtggcgccgtccacatctgcatactccaagaaaacct 131372



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 521    acctttccaactccagaaactggctctccactcagatgagggcgcgggatgacaac 576
              |||||||||||||||| ||||||   ||||||  ||| |||||| |||||||||||
Sbjct: 131299 acctttccaactccagcaactggtaatccactaggatcagggcgagggatgacaac 131244
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                            
Query: 409      aaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttccatg 468
                |||||||||||| |||||||| || ||||||||||| |||||||| || |||||||||||
Sbjct: 26720924 aaacttgttctcagggtagaacactgcaacaactggatttccaccgaacttccttccatg 26720865

                                                                        
Query: 469      catcgccgtctttgctttggtggagccatcaacatctgcatactctaagaacacct 524
                ||| ||||||||||||||||||| ||| || |||||||||||||| ||||| ||||
Sbjct: 26720864 cattgccgtctttgctttggtggcgccgtccacatctgcatactccaagaaaacct 26720809



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 521      acctttccaactccagaaactggctctccactcagatgagggcgcgggatgacaac 576
                |||||||||||||||| ||||||   ||||||  ||| |||||| |||||||||||
Sbjct: 26720736 acctttccaactccagcaactggtaatccactaggatcagggcgagggatgacaac 26720681



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 563      cgcgggatgacaactttcaccaagttacc 591
                |||||||| ||||||||||||| ||||||
Sbjct: 24293494 cgcgggatcacaactttcaccaggttacc 24293522
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                            
Query: 409      aaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttccatg 468
                |||||||||||| |||||||| || ||||||||||| |||||||| || |||||||||||
Sbjct: 27046474 aaacttgttctcagggtagaacactgcaacaactggatttccaccgaacttccttccatg 27046415

                                                                        
Query: 469      catcgccgtctttgctttggtggagccatcaacatctgcatactctaagaacacct 524
                ||| ||||||||||||||||||| ||| || |||||||||||||| ||||| ||||
Sbjct: 27046414 cattgccgtctttgctttggtggcgccgtccacatctgcatactccaagaaaacct 27046359



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 521      acctttccaactccagaaactggctctccactcagatgagggcgcgggatgacaac 576
                |||||||||||||||| ||||||   ||||||  ||| |||||| |||||||||||
Sbjct: 27046286 acctttccaactccagcaactggtaatccactaggatcagggcgagggatgacaac 27046231



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 563      cgcgggatgacaactttcaccaagttacc 591
                |||||||| ||||||||||||| ||||||
Sbjct: 24605163 cgcgggatcacaactttcaccaggttacc 24605191
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>gb|AY111048.1| Zea mays CL3975_1 mRNA sequence
          Length = 974

 Score =  109 bits (55), Expect = 1e-20
 Identities = 157/191 (82%)
 Strand = Plus / Minus

                                                                       
Query: 407 gcaaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttcca 466
           |||||||||| ||| |  ||| |||| || || |||||||| ||||||||||||||||||
Sbjct: 659 gcaaacttgtcctccgcatagcagacagcgaccactgggttcccaccaaatttccttcca 600

                                                                       
Query: 467 tgcatcgccgtctttgctttggtggagccatcaacatctgcatactctaagaacaccttt 526
           |||| ||| |||||||||||||  |  ||||| | ||||||||| || | ||||||||| 
Sbjct: 599 tgcagcgctgtctttgctttggcagcaccatcgatatctgcatattccaggaacaccttc 540

                                                                       
Query: 527 ccaactccagaaactggctctccactcagatgagggcgcgggatgacaactttcaccaag 586
           ||||||||   ||||||||  || ||  | | |||||| ||||||| |||||||||||| 
Sbjct: 539 ccaactcctacaactggctgcccgctggggtcagggcgtgggatgataactttcaccaaa 480

                      
Query: 587 ttaccatattt 597
           |||||||||||
Sbjct: 479 ttaccatattt 469
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>gb|AY103558.1| Zea mays PCO134114 mRNA sequence
          Length = 1707

 Score =  101 bits (51), Expect = 3e-18
 Identities = 117/139 (84%)
 Strand = Plus / Minus

                                                                        
Query: 405  cagcaaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttc 464
            |||| ||||||| |||||| ||||| || || || ||  |||| || ||||||||||  |
Sbjct: 1348 cagcgaacttgtcctcgggatagaacacggccaccacctggttcccgccaaatttccgcc 1289

                                                                        
Query: 465  catgcatcgccgtctttgctttggtggagccatcaacatctgcatactctaagaacacct 524
            |||||||| |||||||||||||||| ||||| || ||||||||||| || || |||||||
Sbjct: 1288 catgcatccccgtctttgctttggtcgagccctcgacatctgcatattccaaaaacacct 1229

                               
Query: 525  ttccaactccagaaactgg 543
            ||||||| |||| ||||||
Sbjct: 1228 ttccaacaccagcaactgg 1210
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>gb|AY112521.1| Zea mays CL1839_9 mRNA sequence
          Length = 647

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                       
Query: 407 gcaaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttcca 466
           |||||||||| ||| |||||||| ||||| || ||  |||| || || |||||||  |||
Sbjct: 391 gcaaacttgtcctcagggtagaacaccgccaccacctggttcccgccgaatttccgccca 450

                                                       
Query: 467 tgcatcgccgtctttgctttggtggagccatcaacatctgcata 510
           |||||| | |||||||||||||| ||||| || |||||||||||
Sbjct: 451 tgcatccctgtctttgctttggttgagccctccacatctgcata 494
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>emb|Y18351.1|NPL18351 Nicotiana plumbaginifolia mRNA for U2 snRNP auxiliary factor, large
            subunit 65a
          Length = 2108

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 410  aacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttccat 467
            ||||||||||| ||||||||||| || |||||| |||| ||||| ||||| |||||||
Sbjct: 1705 aacttgttctccgggtagaagacagctacaacttggttaccaccgaattttcttccat 1648



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 482  gctttggtggagccatcaacatctgcatactctaagaacacctttcc 528
            |||||| |||| || ||||||||||||||||| || || ||||||||
Sbjct: 1633 gctttgctggaaccgtcaacatctgcatactccaaaaatacctttcc 1587
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>emb|Y18350.1|NPL18350 Nicotiana plumbaginifolia mRNA for U2 snRNP auxiliary factor, large
            subunit 65b
          Length = 2204

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 410  aacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttccat 467
            |||||||| || || |||||||| ||||||||| |||| ||||||||||| |||||||
Sbjct: 1835 aacttgttttctggatagaagacagcaacaacttggttgccaccaaattttcttccat 1778



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 500  acatctgcatactctaagaacacctttccaac 531
            |||||||||||||| || || |||||||||||
Sbjct: 1745 acatctgcatactccaaaaatacctttccaac 1714
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>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete
             sequence
          Length = 132549

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 444   ggtttccaccaaatttccttccatgcatcgccgtctttgctttggtggagccatcaacat 503
             |||| ||||||||||||   ||||||||| ||||||||||||||||  |||| || ||||
Sbjct: 75654 ggttcccaccaaatttctgcccatgcatctccgtctttgctttggtcaagccctcgacat 75713

                   
Query: 504   ctgcat 509
             ||||||
Sbjct: 75714 ctgcat 75719
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>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence
          Length = 105308

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 410   aacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttccat 467
             ||||||||||| || |||||||| |||| |||| |||| ||||||||||| |||||||
Sbjct: 67692 aacttgttctctggatagaagacagcaataacttggttaccaccaaattttcttccat 67635
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>ref|NM_104765.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G60830
           mRNA, complete cds
          Length = 336

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 491 gagccatcaacatctgcatactctaagaacacctttccaactcc 534
           |||||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 230 gagccatccacatccgcatactctaagaaaaccttcccaactcc 187
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>ref|NM_104771.3| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G60900
            mRNA, complete cds
          Length = 2085

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 491  gagccatcaacatctgcatactctaagaacacctttccaactcc 534
            |||||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 1763 gagccatccacatccgcatactctaagaaaaccttcccaactcc 1720
to top
>gb|AY140014.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g60900)
            mRNA, complete cds
          Length = 2072

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 491  gagccatcaacatctgcatactctaagaacacctttccaactcc 534
            |||||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 1763 gagccatccacatccgcatactctaagaaaaccttcccaactcc 1720
to top
>gb|BT013617.1| Lycopersicon esculentum clone 132418R, mRNA sequence
          Length = 2047

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 390  catcatagtcctcttcagcaaacttgttctcggggtagaagaccgcaacaactgggtttc 449
            ||||||||||| |||||   |||||||| || || |||||||| || | |||| |||| |
Sbjct: 1858 catcatagtccccttcatagaacttgttttctggatagaagacagctataacttggttgc 1799

                              
Query: 450  caccaaatttccttccat 467
            |||||||||| |||||||
Sbjct: 1798 caccaaattttcttccat 1781
to top
>gb|AC174607.1| Lycopersicon esculentum, complete sequence
          Length = 115283

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                         
Query: 390   catcatagtcctcttcagcaaacttgttctcggggtagaagaccgcaacaactgggtttc 449
             ||||||||||| |||||   |||||||| || || |||||||| || | |||| |||| |
Sbjct: 93817 catcatagtccccttcatagaacttgttttctggatagaagacagctataacttggttgc 93758

                               
Query: 450   caccaaatttccttccat 467
             |||||||||| |||||||
Sbjct: 93757 caccaaattttcttccat 93740
to top
>gb|DQ019636.1| Triticum aestivum U2AF large subunit (U2AF65a) mRNA, complete cds
          Length = 2240

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 402  cttcagcaaacttgttctcggggtagaa 429
            ||||||| ||||||||||||||||||||
Sbjct: 2062 cttcagcgaacttgttctcggggtagaa 2035
to top
>gb|AC091851.2| Homo sapiens chromosome 5 clone CTD-2258D22, complete sequence
          Length = 155606

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 494  ccatcaacatctgcatactcta 515
            ||||||||||||||||||||||
Sbjct: 2704 ccatcaacatctgcatactcta 2725
to top
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence
          Length = 120787

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 491    gagccatcaacatctgcatactctaagaacacct 524
              |||||||| ||||| |||||||||||||| ||||
Sbjct: 119154 gagccatccacatccgcatactctaagaaaacct 119187
to top
>gb|AC079675.1|AC079675 Arabidopsis thaliana chromosome 1 BAC F23C21 genomic sequence, complete
             sequence
          Length = 20264

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 491   gagccatcaacatctgcatactctaagaacacct 524
             |||||||| ||||| |||||||||||||| ||||
Sbjct: 15586 gagccatccacatccgcatactctaagaaaacct 15553
to top
>gb|AC018908.8|AC018908 Arabidopsis thaliana chromosome 1 BAC T7P1 genomic sequence, complete
             sequence
          Length = 102299

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 491   gagccatcaacatctgcatactctaagaacacct 524
             |||||||| ||||| |||||||||||||| ||||
Sbjct: 22785 gagccatccacatccgcatactctaagaaaacct 22752
to top
>gb|AC010368.4|AC010368 Homo sapiens chromosome 5 clone CTD-2046J7, complete sequence
          Length = 149307

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 494  ccatcaacatctgcatactcta 515
            ||||||||||||||||||||||
Sbjct: 9805 ccatcaacatctgcatactcta 9784
to top
>emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 on chromosome 3,
             complete sequence
          Length = 117153

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 406   agcaaacttgttctcggggtagaagaccgcaacaactgggtttccaccaaatttccttcc 465
             |||||| |||||||| || || ||||| ||||  ||| | |||||||||||||| |||||
Sbjct: 86776 agcaaatttgttctctggataaaagacagcaattacttgatttccaccaaattttcttcc 86717

               
Query: 466   at 467
             ||
Sbjct: 86716 at 86715



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 482   gctttggtggagccatcaacatctgcatactc 513
             |||||||| || ||||||||||| ||||||||
Sbjct: 86700 gctttggtagaaccatcaacatcagcatactc 86669
to top
>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete
              sequence
          Length = 635328

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    tacaagctaaaggtgaagtta 132
              |||||||||||||||||||||
Sbjct: 104001 tacaagctaaaggtgaagtta 104021
to top
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0095P22, complete sequence
          Length = 162766

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 563   cgcgggatgacaactttcaccaagttacc 591
             |||||||| ||||||||||||| ||||||
Sbjct: 94603 cgcgggatcacaactttcaccaggttacc 94631
to top
>emb|BX255892.3| Human DNA sequence from clone CTD-2176C4 on chromosome X, complete
            sequence
          Length = 11737

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 155  gggcgctaaatgaagagaatg 175
            |||||||||||||||||||||
Sbjct: 3115 gggcgctaaatgaagagaatg 3095
to top
>gb|AC158769.2| Mus musculus chromosome 15, clone RP23-128J3, complete sequence
          Length = 199472

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 353   tattggcattggaaaagagagataa 377
             |||||||||||||||||||| ||||
Sbjct: 51940 tattggcattggaaaagagacataa 51916
to top
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0096I10, complete sequence
          Length = 171946

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 563    cgcgggatgacaactttcaccaagttacc 591
              |||||||| ||||||||||||| ||||||
Sbjct: 115495 cgcgggatcacaactttcaccaggttacc 115467
to top
>gb|AC120042.3| Homo sapiens chromosome 8, clone RP11-659E9, complete sequence
          Length = 170940

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 105   tgcagggtacaagctaaaggtgaag 129
             |||||||||||||||| ||||||||
Sbjct: 83449 tgcagggtacaagctagaggtgaag 83473
to top
>gb|AC019357.7| Homo sapiens chromosome 8, clone RP11-687A13, complete sequence
          Length = 181694

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 105    tgcagggtacaagctaaaggtgaag 129
              |||||||||||||||| ||||||||
Sbjct: 136661 tgcagggtacaagctagaggtgaag 136685
to top
>dbj|AK073768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H24, full
            insert sequence
          Length = 2016

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 563  cgcgggatgacaactttcaccaagttacc 591
            |||||||| ||||||||||||| ||||||
Sbjct: 1630 cgcgggatcacaactttcaccaggttacc 1602
to top
>gb|AF147083.1|HSGGH3 Homo sapiens gamma-glutamyl hydrolase gene, exons 8 and 9 and
           complete cds
          Length = 6947

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 105 tgcagggtacaagctaaaggtgaag 129
           |||||||||||||||| ||||||||
Sbjct: 65  tgcagggtacaagctagaggtgaag 41
to top
>dbj|AK059255.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H08, full
            insert sequence
          Length = 2177

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 563  cgcgggatgacaactttcaccaagttacc 591
            |||||||| ||||||||||||| ||||||
Sbjct: 1811 cgcgggatcacaactttcaccaggttacc 1783
to top
>gb|AC123606.11| Mus musculus chromosome 15, clone RP24-528D12, complete sequence
          Length = 175623

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 353   tattggcattggaaaagagagataa 377
             |||||||||||||||||||| ||||
Sbjct: 82896 tattggcattggaaaagagacataa 82872
to top
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     tgactcttttgagccatttg 106
              ||||||||||||||||||||
Sbjct: 181901 tgactcttttgagccatttg 181882
to top
>gb|BC077314.1| Xenopus laevis ornithine aminotransferase (gyrate atrophy), mRNA
            (cDNA clone MGC:80244 IMAGE:5048763), complete cds
          Length = 1903

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 460  ccttccatgcatcgccgtctttgctttg 487
            |||||||||| |||| ||||||||||||
Sbjct: 1246 ccttccatgcgtcgcagtctttgctttg 1219
to top
>gb|AC132104.3| Mus musculus BAC clone RP24-364N7 from chromosome 9, complete
            sequence
          Length = 161545

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 62   tcttaccatgccaagttattcaag 85
            ||||||||||||| ||||||||||
Sbjct: 2398 tcttaccatgccatgttattcaag 2375
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 472     cgccgtctttgctttggtgg 491
               ||||||||||||||||||||
Sbjct: 1518633 cgccgtctttgctttggtgg 1518652
to top
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     aagctaaaggtgaagttatt 134
               ||||||||||||||||||||
Sbjct: 1414080 aagctaaaggtgaagttatt 1414061
to top
>emb|CR974476.4| Mouse DNA sequence from clone RP24-469J5 on chromosome 2, complete
              sequence
          Length = 138122

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 109448 actattggcattggaaaaga 109429
to top
>gb|BC045249.1| Xenopus laevis ornithine aminotransferase, mRNA (cDNA clone MGC:53882
            IMAGE:5543139), complete cds
          Length = 1910

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 460  ccttccatgcatcgccgtctttgctttg 487
            ||||||||||||| | ||||||||||||
Sbjct: 1235 ccttccatgcatcacagtctttgctttg 1208
to top
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence
          Length = 184090

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   atctatcttccaatattaat 262
             ||||||||||||||||||||
Sbjct: 46772 atctatcttccaatattaat 46791
to top
>gb|AC102582.9| Mus musculus chromosome 9, clone RP23-312A24, complete sequence
          Length = 190790

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    tcttaccatgccaagttattcaag 85
             ||||||||||||| ||||||||||
Sbjct: 45771 tcttaccatgccatgttattcaag 45794
to top
>emb|AL592207.9| Human DNA sequence from clone RP11-495P10 on chromosome 1 Contains six
             novel genes, the 3' end of a novel gene, a novel
             pseudogene and the 5' end of a novel pseudogene, complete
             sequence
          Length = 173090

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   agggacaagaccaattagat 230
             ||||||||||||||||||||
Sbjct: 49371 agggacaagaccaattagat 49352
to top
>emb|AL138959.20| Human DNA sequence from clone RP11-214O11 on chromosome 13 Contains a
             nucleosome assembly protein 1-like 1 (NAP1L1) pseudogene
             and a ribosomal protein L27a (RPL27A) pseudogene, complete
             sequence
          Length = 168790

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   ggccaggattaagggacaag 219
             ||||||||||||||||||||
Sbjct: 38708 ggccaggattaagggacaag 38727
to top
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome
          Length = 1144377

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    ggagccatcaacatctgcat 509
              ||||||||||||||||||||
Sbjct: 570375 ggagccatcaacatctgcat 570356
to top
>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              2/17
          Length = 349287

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    acacaaaacactattggcat 361
              ||||||||||||||||||||
Sbjct: 127467 acacaaaacactattggcat 127486
to top
>emb|CR788287.7| Mouse DNA sequence from clone RP23-362B9 on chromosome 2, complete
             sequence
          Length = 98311

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 29442 actattggcattggaaaaga 29461
to top
>emb|BX324204.32| Mouse DNA sequence from clone RP23-86F8 on chromosome 2, complete
             sequence
          Length = 90051

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 86001 actattggcattggaaaaga 85982
to top
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    cctcttcagcaaacttgttc 418
              ||||||||||||||||||||
Sbjct: 918472 cctcttcagcaaacttgttc 918491
to top
>dbj|AK140724.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
            enriched library, clone:C030019B04
            product:unclassifiable, full insert sequence
          Length = 2461

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 351  actattggcattggaaaaga 370
            ||||||||||||||||||||
Sbjct: 2303 actattggcattggaaaaga 2284
to top
>gb|AC091169.7| Homo sapiens chromosome 18, clone RP11-809A17, complete sequence
          Length = 163138

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    tcctcttcagcaaacttgtt 417
              ||||||||||||||||||||
Sbjct: 136797 tcctcttcagcaaacttgtt 136778
to top
>emb|CR318639.6| Mouse DNA sequence from clone RP23-317N11 on chromosome 2, complete
              sequence
          Length = 193326

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 168702 actattggcattggaaaaga 168721



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 68695 actattggcattggaaaaga 68714
to top
>emb|CR354442.5| Mouse DNA sequence from clone RP24-562O19 on chromosome 2, complete
              sequence
          Length = 145110

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 139720 actattggcattggaaaaga 139701



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  actattggcattggaaaaga 370
            ||||||||||||||||||||
Sbjct: 7207 actattggcattggaaaaga 7226
to top
>gb|AF232004.3| Pseudomonas syringae pv. tomato strain DC3000 Hrp pathogenicity island,
             complete sequence
          Length = 52498

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   cgccgtctttgctttggtgg 491
             ||||||||||||||||||||
Sbjct: 35331 cgccgtctttgctttggtgg 35312
to top
>gb|AC023906.7|AC023906 Homo sapiens chromosome 15 clone CTD-2184D3 map 15q21.2, complete
             sequence
          Length = 93287

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   tatcttccaatattaataac 265
             ||||||||||||||||||||
Sbjct: 42280 tatcttccaatattaataac 42261
to top
>ref|NM_001028646.1| Caenorhabditis elegans Serpentine Receptor, class W family member
           (srw-68) (srw-68) mRNA, complete cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 440 actgggtttccaccaaattt 459
           ||||||||||||||||||||
Sbjct: 580 actgggtttccaccaaattt 599
to top
>ref|NM_001028647.1| Caenorhabditis elegans Serpentine Receptor, class W family member
           (srw-68) (srw-68) mRNA, complete cds
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 440 actgggtttccaccaaattt 459
           ||||||||||||||||||||
Sbjct: 580 actgggtttccaccaaattt 599
to top
>gb|BC040773.1| Mus musculus similar to LRRGT00085, mRNA (cDNA clone IMAGE:4505796)
          Length = 4158

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 351  actattggcattggaaaaga 370
            ||||||||||||||||||||
Sbjct: 2242 actattggcattggaaaaga 2223
to top
>gb|U53139.2| Caenorhabditis elegans cosmid F18E3, complete sequence
          Length = 23138

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   actgggtttccaccaaattt 459
             ||||||||||||||||||||
Sbjct: 13856 actgggtttccaccaaattt 13837
to top
>emb|BX890623.6| Mouse DNA sequence from clone RP23-83O23 on chromosome 2, complete
             sequence
          Length = 226542

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 31401 actattggcattggaaaaga 31420
to top
>emb|BX813319.4| Mouse DNA sequence from clone RP23-54B12 on chromosome 2, complete
              sequence
          Length = 217197

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 101215 actattggcattggaaaaga 101196
to top
>gb|AY005479.1| Xenopus laevis ornithine aminotransferase (OAT) mRNA, complete cds
          Length = 1320

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 460  ccttccatgcatcgccgtctttgctttg 487
            ||||||||||||| | ||||||||||||
Sbjct: 1177 ccttccatgcatcacagtctttgctttg 1150
to top
>emb|BX682537.3| Mouse DNA sequence from clone RP23-376N23 on chromosome 2, complete
              sequence
          Length = 186050

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 121988 actattggcattggaaaaga 122007



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 24404 actattggcattggaaaaga 24423
to top
>emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, complete sequence
          Length = 229574

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 499    aacatctgcatactctaagaacac 522
              ||||||| ||||||||||||||||
Sbjct: 106104 aacatctacatactctaagaacac 106081
to top
>emb|BX511235.10| Mouse DNA sequence from clone RP23-232H13 on chromosome 2, complete
              sequence
          Length = 169581

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 161139 actattggcattggaaaaga 161120



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 71730 actattggcattggaaaaga 71711
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>emb|BX284639.15| Mouse DNA sequence from clone RP24-87L14 on chromosome 2, complete
            sequence
          Length = 115602

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  actattggcattggaaaaga 370
            ||||||||||||||||||||
Sbjct: 6045 actattggcattggaaaaga 6064
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>emb|AL845476.15| Mouse DNA sequence from clone RP23-355G16 on chromosome 2, complete
              sequence
          Length = 218484

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 123098 actattggcattggaaaaga 123079
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>emb|BX005149.16| Mouse DNA sequence from clone RP24-574J13 on chromosome 2, complete
              sequence
          Length = 179228

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 129176 actattggcattggaaaaga 129157
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>emb|CT010482.9| Mouse DNA sequence from clone RP23-282O12 on chromosome 2, complete
             sequence
          Length = 188883

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 93766 actattggcattggaaaaga 93747
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>emb|CR955031.3| Mouse DNA sequence from clone RP24-395K22 on chromosome 2, complete
             sequence
          Length = 178000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 46000 actattggcattggaaaaga 46019
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>gb|U16118.1|PSU16118 Pseudomonas syringae pv. tomato avrE avirulence locus,
            transcriptional units II and III, promoter region, and
            orf, partial cds
          Length = 2008

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 472  cgccgtctttgctttggtgg 491
            ||||||||||||||||||||
Sbjct: 1275 cgccgtctttgctttggtgg 1256
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>emb|BX284650.8| Human DNA sequence from clone RP6-206I17 on chromosome 1, complete
             sequence
          Length = 126477

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   agggacaagaccaattagat 230
             ||||||||||||||||||||
Sbjct: 27580 agggacaagaccaattagat 27599
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>emb|AL845456.11| Mouse DNA sequence from clone RP23-90C6 on chromosome 2, complete
              sequence
          Length = 158544

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 152457 actattggcattggaaaaga 152438
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>gb|U97505.1|PSU97505 Pseudomonas syringae avirulence protein (avrE) and avirulence protein
            (avrF) genes, complete cds
          Length = 6130

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 472  cgccgtctttgctttggtgg 491
            ||||||||||||||||||||
Sbjct: 1153 cgccgtctttgctttggtgg 1134
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>emb|CR848808.14| Mouse DNA sequence from clone RP23-442I10 on chromosome 2, complete
             sequence
          Length = 128936

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   actattggcattggaaaaga 370
             ||||||||||||||||||||
Sbjct: 36581 actattggcattggaaaaga 36600
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>emb|AL845494.3| Mouse DNA sequence from clone RP23-330D3 on chromosome 2, complete
              sequence
          Length = 216517

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 111884 actattggcattggaaaaga 111903
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>emb|AL845491.3| Mouse DNA sequence from clone RP23-360A2 on chromosome 2, complete
              sequence
          Length = 201381

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    actattggcattggaaaaga 370
              ||||||||||||||||||||
Sbjct: 142332 actattggcattggaaaaga 142351


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,203,661
Number of Sequences: 3902068
Number of extensions: 5203661
Number of successful extensions: 93717
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93398
Number of HSP's gapped (non-prelim): 319
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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