Clone Name | rbasd25f07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ZN133_HUMAN (P52736) Zinc finger protein 133 | 30 | 1.1 | 2 | RL26_LITLI (Q95WA0) 60S ribosomal protein L26 | 30 | 1.9 | 3 | FREM1_MOUSE (Q684R7) FRAS1-related extracellular matrix protein ... | 29 | 3.3 | 4 | GIS1_YEAST (Q03833) Transcriptional activator/repressor GIS1 | 28 | 4.3 | 5 | RPH1_YEAST (P39956) DNA damage-responsive transcriptional repres... | 28 | 4.3 | 6 | Y4LO_RHISN (P55555) Hypothetical 29.1 kDa protein y4lO | 28 | 5.7 | 7 | RS13_CHOPR (Q8MUR2) 40S ribosomal protein S13 | 27 | 9.7 |
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>ZN133_HUMAN (P52736) Zinc finger protein 133| Length = 654 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 9/54 (16%) Frame = -3 Query: 205 CMHQFSLPPTSLISGKHTHAGHSPWE--------GIKSMLGRFQ-WHGGEPPVL 71 C H FS T LIS + TH G P+ +KS L R Q H GE P++ Sbjct: 415 CGHSFSQNST-LISHRRTHTGEKPYVCGVCGRGFSLKSHLNRHQNIHSGEKPIV 467
>RL26_LITLI (Q95WA0) 60S ribosomal protein L26| Length = 144 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -2 Query: 254 KRFKAADHAPAHANKKVYASIFTSSNKSDFRETYSCRSLPLGRN 123 K K +AP+H +K I +S + R+ Y+CRS+P+ ++ Sbjct: 13 KNRKRHFNAPSHMRRK----IMSSPMSKELRQKYNCRSMPIRKD 52
>FREM1_MOUSE (Q684R7) FRAS1-related extracellular matrix protein 1 precursor| (QBRICK protein) Length = 2191 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -3 Query: 214 TRKCMHQFSLPPTSLISGKHTH-----AGHSP-WEGIKSM--LGRFQWHGGEP 80 TR C Q +++S +H +G P W G+K+ G ++W GGEP Sbjct: 2091 TRACREQHQGDLVTVLSRRHMQWLWAMSGRKPFWIGLKNQPRTGHWEWIGGEP 2143
>GIS1_YEAST (Q03833) Transcriptional activator/repressor GIS1| Length = 894 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = -2 Query: 290 LENGKKGEAAP--AKRFKAADHAPAHANKKV 204 + +G+K + P KRFK DH H NKK+ Sbjct: 850 VHSGEKPHSCPRCGKRFKRRDHVLQHLNKKI 880
>RPH1_YEAST (P39956) DNA damage-responsive transcriptional repressor RPH1| Length = 796 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = -2 Query: 290 LENGKKGEAAP--AKRFKAADHAPAHANKKV 204 + +G+K + P KRFK DH H NKK+ Sbjct: 731 VHSGEKPHSCPKCGKRFKRRDHVLQHLNKKI 761
>Y4LO_RHISN (P55555) Hypothetical 29.1 kDa protein y4lO| Length = 260 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +3 Query: 234 ICSLKPLCWGSLPFLPILQLLSV--CN 308 IC+ KP WG +P +LQ LS+ CN Sbjct: 234 ICANKPFSWGEVPPSDLLQALSLQQCN 260
>RS13_CHOPR (Q8MUR2) 40S ribosomal protein S13| Length = 150 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = -3 Query: 289 WRMGRKGRLPQQSGLRLQIMHRLMQTR 209 +++G+KG P Q G++L+ H ++Q R Sbjct: 37 FKLGKKGLTPSQIGVKLRDSHGVVQVR 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,502,138 Number of Sequences: 219361 Number of extensions: 978596 Number of successful extensions: 2567 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2477 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2564 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)