>ZN133_HUMAN (P52736) Zinc finger protein 133|
          Length = 654

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
 Frame = -3

Query: 205 CMHQFSLPPTSLISGKHTHAGHSPWE--------GIKSMLGRFQ-WHGGEPPVL 71
           C H FS   T LIS + TH G  P+          +KS L R Q  H GE P++
Sbjct: 415 CGHSFSQNST-LISHRRTHTGEKPYVCGVCGRGFSLKSHLNRHQNIHSGEKPIV 467

>RL26_LITLI (Q95WA0) 60S ribosomal protein L26|
          Length = 144

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 254 KRFKAADHAPAHANKKVYASIFTSSNKSDFRETYSCRSLPLGRN 123
           K  K   +AP+H  +K    I +S    + R+ Y+CRS+P+ ++
Sbjct: 13  KNRKRHFNAPSHMRRK----IMSSPMSKELRQKYNCRSMPIRKD 52

>FREM1_MOUSE (Q684R7) FRAS1-related extracellular matrix protein 1 precursor|
            (QBRICK protein)
          Length = 2191

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
 Frame = -3

Query: 214  TRKCMHQFSLPPTSLISGKHTH-----AGHSP-WEGIKSM--LGRFQWHGGEP 80
            TR C  Q      +++S +H       +G  P W G+K+    G ++W GGEP
Sbjct: 2091 TRACREQHQGDLVTVLSRRHMQWLWAMSGRKPFWIGLKNQPRTGHWEWIGGEP 2143

>GIS1_YEAST (Q03833) Transcriptional activator/repressor GIS1|
          Length = 894

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 290 LENGKKGEAAP--AKRFKAADHAPAHANKKV 204
           + +G+K  + P   KRFK  DH   H NKK+
Sbjct: 850 VHSGEKPHSCPRCGKRFKRRDHVLQHLNKKI 880

>RPH1_YEAST (P39956) DNA damage-responsive transcriptional repressor RPH1|
          Length = 796

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 290 LENGKKGEAAP--AKRFKAADHAPAHANKKV 204
           + +G+K  + P   KRFK  DH   H NKK+
Sbjct: 731 VHSGEKPHSCPKCGKRFKRRDHVLQHLNKKI 761

>Y4LO_RHISN (P55555) Hypothetical 29.1 kDa protein y4lO|
          Length = 260

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +3

Query: 234 ICSLKPLCWGSLPFLPILQLLSV--CN 308
           IC+ KP  WG +P   +LQ LS+  CN
Sbjct: 234 ICANKPFSWGEVPPSDLLQALSLQQCN 260

>RS13_CHOPR (Q8MUR2) 40S ribosomal protein S13|
          Length = 150

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -3

Query: 289 WRMGRKGRLPQQSGLRLQIMHRLMQTR 209
           +++G+KG  P Q G++L+  H ++Q R
Sbjct: 37  FKLGKKGLTPSQIGVKLRDSHGVVQVR 63


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,502,138
Number of Sequences: 219361
Number of extensions: 978596
Number of successful extensions: 2567
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2564
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)