ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24p17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ222774.1|HVJ222774 Hordeum vulgare mRNA for putative thiol... 733 0.0
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
3dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
4gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.022
5emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease 48 0.022
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
7dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
8dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene... 48 0.022
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.022
10ref|XM_759922.1| Theileria parva strain Muguga hypothetical prot... 46 0.089
11gb|AC011334.5| Homo sapiens chromosome 5 clone CTC-235N17, compl... 44 0.35
12gb|AC011354.4|AC011354 Homo sapiens chromosome 5 clone CTC-354F1... 44 0.35
13emb|BX649289.11| Zebrafish DNA sequence from clone DKEY-231H5 in... 44 0.35
14gb|U48863.1|PCU48863 Petroselinum crispum pathogenesis-related p... 44 0.35
15ref|NM_183860.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
16gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, com... 42 1.4
17gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 42 1.4
18gb|AY380826.1| Lymphocystis disease virus - isolate China, compl... 42 1.4
19gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, comple... 42 1.4
20gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6... 42 1.4
21gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5... 42 1.4
22emb|AL357293.16| Human DNA sequence from clone RP11-418K10 on ch... 42 1.4
23gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, co... 42 1.4
24gb|AF267914.1| Saccharomyces bayanus tRNA-Thr gene, partial sequ... 42 1.4
25gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome... 42 1.4
26gb|AC157782.7| Mus musculus chromosome 7, clone RP23-86L13, comp... 42 1.4
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
28gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, r... 42 1.4
29emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in ... 42 1.4
30gb|AC090764.35| Homo sapiens chromosome 15, clone RP11-289D12, c... 42 1.4
31gb|AC135069.17| Homo sapiens chromosome 15, clone RP11-1081C20, ... 42 1.4
32dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
33dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
34emb|CT572986.11| Mouse DNA sequence from clone RP23-32M23 on chr... 42 1.4
35gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 42 1.4
36gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 ... 42 1.4
37emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in ... 42 1.4
38emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in... 42 1.4
39emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chro... 42 1.4
40gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosom... 42 1.4
41gb|AC154009.1| Mus musculus 6 NOVECTOR RP24-544G1 (Roswell Park ... 40 5.5
42ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Ozsa816... 40 5.5
43ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
44ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
45ref|NM_184003.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
46ref|NM_183997.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
47gb|AC007418.9| Drosophila melanogaster clone BACR16P22, complete... 40 5.5
48gb|AC009208.6| Drosophila melanogaster clone BACR31I21, complete... 40 5.5
49gb|AC150550.1| Drosophila melanogaster clone BACR21G13, complete... 40 5.5
50gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence 40 5.5
51gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, co... 40 5.5
52gb|AY962591.1| Candida metapsilosis strain MCO448 mitochondrion,... 40 5.5
53gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome... 40 5.5
54gb|AC123866.4| Mus musculus BAC clone RP23-124I3 from chromosome... 40 5.5
55gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome... 40 5.5
56gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence 40 5.5
57emb|AJ011856.1|SCE011856 Saccharomyces cerevisiae complete mitoc... 40 5.5
58emb|AL607082.9| Human DNA sequence from clone RP11-166O7 on chro... 40 5.5
59emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chro... 40 5.5
60gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1... 40 5.5
61emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on ch... 40 5.5
62emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in... 40 5.5
63emb|V00695.1|MISC14 Yeast mitochondrial tRNA genes (several, map... 40 5.5
64emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine pro... 40 5.5
65emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 40 5.5
66emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in li... 40 5.5
67emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chr... 40 5.5
68emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 40 5.5
69gb|AC008114.25| Homo sapiens 12 BAC RP11-502N13 (Roswell Park Ca... 40 5.5
70emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 i... 40 5.5
71gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.5
72emb|BX511181.13| Zebrafish DNA sequence from clone DKEY-100H5 in... 40 5.5
73emb|BX569788.6| Zebrafish DNA sequence from clone CH211-161N19 i... 40 5.5
74gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 5.5
75gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, comp... 40 5.5
76ref|NM_165422.1| Drosophila melanogaster CG2944-RF, transcript v... 40 5.5
77ref|NM_165420.1| Drosophila melanogaster CG2944-RD, transcript v... 40 5.5
78dbj|AK134322.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 5.5
79gb|L36887.1|YSCMTCG03 Saccharomyces cerevisiae mitochondrion tra... 40 5.5
80gb|AC100800.2| Homo sapiens chromosome 8, clone RP11-161I2, comp... 40 5.5
81gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, comp... 40 5.5
82gb|AC008256.5| Drosophila melanogaster, chromosome 2R, region 41... 40 5.5
83gb|AC013247.8| Drosophila melanogaster, chromosome 2R, region 41... 40 5.5
84gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50... 40 5.5
85gb|AC021231.8| Homo sapiens chromosome , clone RP11-323I15, comp... 40 5.5
86dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
87gb|AC024153.22| Homo sapiens 12 BAC RP13-359K18 (Roswell Park Ca... 40 5.5
88gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, r... 40 5.5
89gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complet... 40 5.5
90dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
91gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, comple... 40 5.5
92dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
93dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
94dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
95dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
96emb|BX649477.10| Zebrafish DNA sequence from clone CH211-265K4 i... 40 5.5
97emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 i... 40 5.5
98dbj|AB159447.1| Bombyx mori DNA, chromosome 13, clone:534E24, co... 40 5.5
99dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
100dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
101gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete ... 40 5.5
102dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
103dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
104emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in... 40 5.5
105gb|AC006196.3|AC006196 Homo sapiens, clone hRPK.1_A_1, complete ... 40 5.5
106emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 i... 40 5.5
107gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61... 40 5.5
108gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21... 40 5.5
109gb|AE003817.3| Drosophila melanogaster chromosome 2R, section 33... 40 5.5
110gb|AE003787.5| Drosophila melanogaster chromosome 2R, section 2 ... 40 5.5
111gb|AC005643.1|AC005643 Drosophila melanogaster, chromosome 2R, r... 40 5.5
112gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, comp... 40 5.5
113gb|AC154012.5| Mus musculus 6 BAC RP24-496L23 (Roswell Park Canc... 40 5.5
114emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chr... 40 5.5
115emb|AL929578.4| Zebrafish DNA sequence from clone CH211-189L6, c... 40 5.5
116emb|X06047.1|MISCTRNA Yeast mitochondrial tRNA genes for tRNA-Al... 40 5.5
117gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 40 5.5
118emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chrom... 40 5.5
119emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chr... 40 5.5
120gb|M77350.1|MUSMHKA1A Mouse hair keratin A1 (MHKA1) gene, comple... 40 5.5
121emb|AL592545.10| Mouse DNA sequence from clone RP23-374H24 on ch... 40 5.5

>emb|AJ222774.1|HVJ222774 Hordeum vulgare mRNA for putative thiol protease, clone L8
          Length = 382

 Score =  733 bits (370), Expect = 0.0
 Identities = 378/382 (98%)
 Strand = Plus / Minus

                                                                       
Query: 24  tggggtacacaaatgaatagctaggtaccgtgcaattatttaatatttatatataaaggt 83
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tggggtacacaaatgaatagctaggtaccgtgcaattatttaatatttatatataaaggt 323

                                                                       
Query: 84  atgcacggngncacacagaganagatgatgatggaggtgccatcatatgatagggtaaac 143
           |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgcacggagtcacacagagatagatgatgatggaggtgccatcatatgatagggtaaac 263

                                                                       
Query: 144 cgggagcttggcaaggccgcacaagcccaagggcggcgagtccctaaggagatagatgaa 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cgggagcttggcaaggccgcacaagcccaagggcggcgagtccctaaggagatagatgaa 203

                                                                       
Query: 204 gcctttgtcaccccacttggcagtccacgagttcttaccgatccagtacttggtcccgtc 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gcctttgtcaccccacttggcagtccacgagttcttaccgatccagtacttggtcccgtc 143

                                                                       
Query: 264 aggcttggtcccgtacccgacgagggccatcgcatggttctgcgcagtcttgcacgcccc 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aggcttggtcccgtacccgacgagggccatcgcatggttctgcgcagtcttgcacgcccc 83

                                                                       
Query: 324 tttgatgtagacgccggacctggagcaaccggcgttgtacacgccgccgatgtagtgctg 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  tttgatgtagacgccggacctggagcaaccggcgttgtacacgccgccgatgtagtgctg 23

                                 
Query: 384 gaagcangggtcactgtagtcg 405
           |||||| |||||||||||||||
Sbjct: 22  gaagcaggggtcactgtagtcg 1



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 228      ccacgagttcttaccgatccagtacttggt 257
                ||||||||||||| ||||||||||||||||
Sbjct: 22126327 ccacgagttcttaacgatccagtacttggt 22126356



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 228      ccacgagttcttaccgatccagta 251
                ||||||||||||| ||||||||||
Sbjct: 22136831 ccacgagttcttaacgatccagta 22136854



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>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0042B15
          Length = 157981

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 228   ccacgagttcttaccgatccagtacttggt 257
             ||||||||||||| ||||||||||||||||
Sbjct: 47820 ccacgagttcttaacgatccagtacttggt 47849



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 228   ccacgagttcttaccgatccagta 251
             ||||||||||||| ||||||||||
Sbjct: 58324 ccacgagttcttaacgatccagta 58347



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>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026D03 map near S2137, complete sequence
          Length = 115141

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 228   ccacgagttcttaccgatccagtacttggtcccgtc 263
             ||||||||||||  |||||||||||||||| |||||
Sbjct: 34059 ccacgagttcttgacgatccagtacttggtgccgtc 34024



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>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease
          Length = 1440

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 228  ccacgagttcttaccgatccagtacttggtcccgtc 263
            ||||||||||||  |||||||||||||||| |||||
Sbjct: 1071 ccacgagttcttgacgatccagtacttggtgccgtc 1036



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 228     ccacgagttcttaccgatccagtacttggtcccgtc 263
               ||||||||||||  |||||||||||||||| |||||
Sbjct: 8298341 ccacgagttcttgacgatccagtacttggtgccgtc 8298376



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>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full
            insert sequence
          Length = 1511

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 228  ccacgagttcttaccgatccagtacttggtcccgtc 263
            ||||||||||||  |||||||||||||||| |||||
Sbjct: 1077 ccacgagttcttgacgatccagtacttggtgccgtc 1042



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>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine
            endopeptidase, complete cds
          Length = 3836

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 228  ccacgagttcttaccgatccagtacttggtcccgtc 263
            ||||||||||||  |||||||||||||||| |||||
Sbjct: 2593 ccacgagttcttgacgatccagtacttggtgccgtc 2558



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 228     ccacgagttcttaccgatccagtacttggtcccgtc 263
               ||||||||||||  |||||||||||||||| |||||
Sbjct: 8369104 ccacgagttcttgacgatccagtacttggtgccgtc 8369139



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>ref|XM_759922.1| Theileria parva strain Muguga hypothetical protein (TP02_0449)
            partial mRNA
          Length = 2578

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 57   aattatttaatatttatatataa 79
            |||||||||||||||||||||||
Sbjct: 2546 aattatttaatatttatatataa 2568



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>gb|AC011334.5| Homo sapiens chromosome 5 clone CTC-235N17, complete sequence
          Length = 134413

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 58    attatttaatatttatatataa 79
             ||||||||||||||||||||||
Sbjct: 10601 attatttaatatttatatataa 10580



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>gb|AC011354.4|AC011354 Homo sapiens chromosome 5 clone CTC-354F19, complete sequence
          Length = 133042

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 58    attatttaatatttatatataa 79
             ||||||||||||||||||||||
Sbjct: 83622 attatttaatatttatatataa 83601



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>emb|BX649289.11| Zebrafish DNA sequence from clone DKEY-231H5 in linkage group 20,
              complete sequence
          Length = 124708

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 58     attatttaatatttatatataa 79
              ||||||||||||||||||||||
Sbjct: 109111 attatttaatatttatatataa 109132



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>gb|U48863.1|PCU48863 Petroselinum crispum pathogenesis-related protein (pr1-2) gene,
           promoter region and most of exon 1
          Length = 1312

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 57  aattatttaatatttatatata 78
           ||||||||||||||||||||||
Sbjct: 244 aattatttaatatttatatata 265



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>ref|NM_183860.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 227  tccacgagttcttaccgatccagtacttg 255
            |||||||||||||  ||||||||||||||
Sbjct: 1000 tccacgagttcttggcgatccagtacttg 972



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>gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, complete sequence
          Length = 182519

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     tatttaatatttatatataaa 80
              |||||||||||||||||||||
Sbjct: 170616 tatttaatatttatatataaa 170596



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>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
              sequence
          Length = 253151

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 60     tatttaatatttatatataaa 80
              |||||||||||||||||||||
Sbjct: 195643 tatttaatatttatatataaa 195663



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>gb|AY380826.1| Lymphocystis disease virus - isolate China, complete genome
          Length = 186250

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 57    aattatttaatatttatatataaag 81
             |||| ||||||||||||||||||||
Sbjct: 67750 aattttttaatatttatatataaag 67726



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>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence
          Length = 219825

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     attatttaatatttatatata 78
              |||||||||||||||||||||
Sbjct: 216486 attatttaatatttatatata 216466



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>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the
          complete sequence
          Length = 250823

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 57 aattatttaatatttatatataaag 81
          ||||||| |||||||||||||||||
Sbjct: 24 aattattaaatatttatatataaag 48



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>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete
              sequence
          Length = 250029

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 57     aattatttaatatttatatataaag 81
              ||||||| |||||||||||||||||
Sbjct: 249993 aattattaaatatttatatataaag 250017



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>emb|AL357293.16| Human DNA sequence from clone RP11-418K10 on chromosome 9, complete
             sequence
          Length = 104596

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    tatttaatatttatatataaa 80
             |||||||||||||||||||||
Sbjct: 90310 tatttaatatttatatataaa 90290



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>gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, complete sequence
          Length = 174164

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    tatttaatatttatatataaa 80
             |||||||||||||||||||||
Sbjct: 15028 tatttaatatttatatataaa 15008



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>gb|AF267914.1| Saccharomyces bayanus tRNA-Thr gene, partial sequence; and tRNA-Cys,
            tRNA-His, tRNA-Leu, tRNA-Gln, tRNA-Lys, tRNA-Arg,
            tRNA-Gly, tRNA-Asp, tRNA-Ser, tRNA-Arg, tRNA-Ala,
            tRNA-Ile, tRNA-Tyr, tRNA-Asn, and tRNA-Met genes,
            complete sequence; mitochondrial genes for mitochondrial
            products
          Length = 5219

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   aatatttatatataaaggtat 85
            |||||||||||||||||||||
Sbjct: 1635 aatatttatatataaaggtat 1655



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>gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome 13, complete
            sequence
          Length = 176432

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 69   tttatatataaaggtatgcac 89
            |||||||||||||||||||||
Sbjct: 4520 tttatatataaaggtatgcac 4500



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>gb|AC157782.7| Mus musculus chromosome 7, clone RP23-86L13, complete sequence
          Length = 167982

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    tatttaatatttatatataaa 80
             |||||||||||||||||||||
Sbjct: 14155 tatttaatatttatatataaa 14135



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 227      tccacgagttcttaccgatccagtacttg 255
                |||||||||||||  ||||||||||||||
Sbjct: 12735937 tccacgagttcttggcgatccagtacttg 12735909



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 59       ttatttaatatttatatata 78
                ||||||||||||||||||||
Sbjct: 21029183 ttatttaatatttatatata 21029164



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 227      tccacgagttcttaccgatccagtactt 254
                |||||||||||||  |||||||||||||
Sbjct: 13843215 tccacgagttcttggcgatccagtactt 13843188



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 227      tccacgagttcttaccgatccagtactt 254
                |||||||||||||  |||||||||||||
Sbjct: 13821084 tccacgagttcttggcgatccagtactt 13821111



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 228     ccacgagttcttaccgatccagtacttg 255
               ||||||||||||  ||||||||||||||
Sbjct: 6400961 ccacgagttcttggcgatccagtacttg 6400934



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>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone
             BACR17H16, complete sequence
          Length = 182080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    tatttaatatttatatataaa 80
             |||||||||||||||||||||
Sbjct: 57849 tatttaatatttatatataaa 57829



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>emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in linkage group 3,
            complete sequence
          Length = 192501

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 59   ttatttaatatttatatataa 79
            |||||||||||||||||||||
Sbjct: 9131 ttatttaatatttatatataa 9111



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>gb|AC090764.35| Homo sapiens chromosome 15, clone RP11-289D12, complete sequence
          Length = 137300

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     tatttaatatttatatataaa 80
              |||||||||||||||||||||
Sbjct: 129336 tatttaatatttatatataaa 129316



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>gb|AC135069.17| Homo sapiens chromosome 15, clone RP11-1081C20, complete sequence
          Length = 222726

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     tatttaatatttatatataaa 80
              |||||||||||||||||||||
Sbjct: 108470 tatttaatatttatatataaa 108450



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>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489E06
          Length = 140229

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 227   tccacgagttcttaccgatccagtacttg 255
             |||||||||||||  ||||||||||||||
Sbjct: 16336 tccacgagttcttggcgatccagtacttg 16308



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>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0554D10
          Length = 158723

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 227    tccacgagttcttaccgatccagtacttg 255
              |||||||||||||  ||||||||||||||
Sbjct: 102966 tccacgagttcttggcgatccagtacttg 102938



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>emb|CT572986.11| Mouse DNA sequence from clone RP23-32M23 on chromosome 13, complete
             sequence
          Length = 76596

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 69    tttatatataaaggtatgcac 89
             |||||||||||||||||||||
Sbjct: 37493 tttatatataaaggtatgcac 37473



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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 354     ggcgttgtacacgccgccgatgtag 378
               ||||||||||||||||| |||||||
Sbjct: 3025170 ggcgttgtacacgccgcggatgtag 3025194



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>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete
              sequence
          Length = 315109

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     tatttaatatttatatataaa 80
              |||||||||||||||||||||
Sbjct: 122273 tatttaatatttatatataaa 122253



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>emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in linkage group 5,
             complete sequence
          Length = 163926

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    tatttaatatttatatataaa 80
             |||||||||||||||||||||
Sbjct: 30008 tatttaatatttatatataaa 30028



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>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5,
             complete sequence
          Length = 143013

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    tatttaatatttatatataaa 80
             |||||||||||||||||||||
Sbjct: 31265 tatttaatatttatatataaa 31285



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>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete
              sequence
          Length = 208265

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     attatttaatatttatatata 78
              |||||||||||||||||||||
Sbjct: 204926 attatttaatatttatatata 204906



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>gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosome 6, complete sequence
          Length = 160884

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 53    gtgcaattatttaatatttatatat 77
             ||||||||||||| |||||||||||
Sbjct: 93353 gtgcaattatttagtatttatatat 93377



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>gb|AC154009.1| Mus musculus 6 NOVECTOR RP24-544G1 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 140214

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttatttaatatttatatata 78
             ||||||||||||||||||||
Sbjct: 35258 ttatttaatatttatatata 35277



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttatttaatatttatatata 78
             ||||||||||||||||||||
Sbjct: 35235 ttatttaatatttatatata 35254



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>ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Ozsa8161 predicted mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 228 ccacgagttcttaccgatccagtacttg 255
           ||||||||||||  ||||||||||||||
Sbjct: 996 ccacgagttcttggcgatccagtacttg 969



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>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 228  ccacgagttcttaccgatccagtacttggtcccgtc 263
            |||||||||| |  |||||||||||||||| |||||
Sbjct: 1038 ccacgagttcctgacgatccagtacttggtgccgtc 1003



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>ref|XM_483741.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 228  ccacgagttcttaccgatccagtacttggtcccgtc 263
            |||||||||| |  |||||||||||||||| |||||
Sbjct: 1038 ccacgagttcctgacgatccagtacttggtgccgtc 1003



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>ref|NM_184003.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 227 tccacgagttcttaccgatccagtactt 254
           |||||||||||||  |||||||||||||
Sbjct: 982 tccacgagttcttggcgatccagtactt 955



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>ref|NM_183997.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 227 tccacgagttcttaccgatccagtactt 254
           |||||||||||||  |||||||||||||
Sbjct: 982 tccacgagttcttggcgatccagtactt 955



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>gb|AC007418.9| Drosophila melanogaster clone BACR16P22, complete sequence
          Length = 179325

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ttatttaatatttatatata 78
             ||||||||||||||||||||
Sbjct: 75220 ttatttaatatttatatata 75201



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>gb|AC009208.6| Drosophila melanogaster clone BACR31I21, complete sequence
          Length = 152443

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   ttatttaatatttatatata 78
            ||||||||||||||||||||
Sbjct: 7399 ttatttaatatttatatata 7380



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>gb|AC150550.1| Drosophila melanogaster clone BACR21G13, complete sequence
          Length = 173358

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      tacatacatacatagacatg 25
              ||||||||||||||||||||
Sbjct: 132800 tacatacatacatagacatg 132819



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>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence
          Length = 279448

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 57    aattatttaatatttatatataaa 80
             |||| |||||||||||||||||||
Sbjct: 72185 aattgtttaatatttatatataaa 72162



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>gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, complete sequence
          Length = 179510

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    tgatgatggaggtgccatca 128
              ||||||||||||||||||||
Sbjct: 132026 tgatgatggaggtgccatca 132007



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>gb|AY962591.1| Candida metapsilosis strain MCO448 mitochondrion, complete genome
          Length = 24152

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    atttaatatttatatataaa 80
             ||||||||||||||||||||
Sbjct: 17358 atttaatatttatatataaa 17377



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>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence
          Length = 218807

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tacatacatacatagacatg 25
             ||||||||||||||||||||
Sbjct: 13388 tacatacatacatagacatg 13369



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>gb|AC123866.4| Mus musculus BAC clone RP23-124I3 from chromosome 8, complete sequence
          Length = 217446

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tatttaatatttatatataa 79
             ||||||||||||||||||||
Sbjct: 69500 tatttaatatttatatataa 69519



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>gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome 6, complete sequence
          Length = 182355

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     ttatttaatatttatatata 78
              ||||||||||||||||||||
Sbjct: 146734 ttatttaatatttatatata 146753



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     ttatttaatatttatatata 78
              ||||||||||||||||||||
Sbjct: 146711 ttatttaatatttatatata 146730



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>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence
          Length = 177066

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     tatttaatatttatatataa 79
              ||||||||||||||||||||
Sbjct: 114683 tatttaatatttatatataa 114702



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>emb|AJ011856.1|SCE011856 Saccharomyces cerevisiae complete mitochondrial genome
          Length = 85779

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ttatttaatatttatatata 78
             ||||||||||||||||||||
Sbjct: 69986 ttatttaatatttatatata 69967



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>emb|AL607082.9| Human DNA sequence from clone RP11-166O7 on chromosome 10, complete
             sequence
          Length = 75633

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aattatttaatatttatata 76
             ||||||||||||||||||||
Sbjct: 16134 aattatttaatatttatata 16153



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>emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chromosome 6 Contains
            part of the LAMA2 gene for laminin, alpha 2 (merosin,
            congenital muscular dystrophy) (LAMM), complete sequence
          Length = 91827

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   aattatttaatatttatata 76
            ||||||||||||||||||||
Sbjct: 4656 aattatttaatatttatata 4637



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>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete
              sequence
          Length = 250743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     ttatttaatatttatatata 78
              ||||||||||||||||||||
Sbjct: 241955 ttatttaatatttatatata 241936



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     ttatttaatatttatatata 78
              ||||||||||||||||||||
Sbjct: 241849 ttatttaatatttatatata 241830



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     ttatttaatatttatatata 78
              ||||||||||||||||||||
Sbjct: 138986 ttatttaatatttatatata 139005



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>emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on chromosome 9 Contains the 5'
              end of the SHB gene for SHB (Src homology 2 domain
              containing) adaptor protein B and two CpG islands, complete
              sequence
          Length = 164857

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     atttaatatttatatataaa 80
              ||||||||||||||||||||
Sbjct: 144618 atttaatatttatatataaa 144637



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>emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in linkage group 23,
              complete sequence
          Length = 110120

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 57     aattatttaatatttatatataaa 80
              |||| |||||||||||||||||||
Sbjct: 103835 aattctttaatatttatatataaa 103812



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>emb|V00695.1|MISC14 Yeast mitochondrial tRNA genes (several, map positions 3.5 to 8.6)
            encoding tRNAs for Lys, Arg, Gly, Asp, Ser, Arg, and Ala
          Length = 3630

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   ttatttaatatttatatata 78
            ||||||||||||||||||||
Sbjct: 3593 ttatttaatatttatatata 3574



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>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase
          Length = 5593

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 228  ccacgagttcttaccgatccagtacttggtcccgtc 263
            ||||||||||||   ||||||||||||||| |||||
Sbjct: 4810 ccacgagttcttcatgatccagtacttggtgccgtc 4775



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>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 57      aattatttaatatttatata 76
               ||||||||||||||||||||
Sbjct: 1374034 aattatttaatatttatata 1374053



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>emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in linkage group 14 Contains
              part of a novel gene similar to ATP8B1 (ATPase, Class I,
              type 8B, member 1), part of a novel gene similar to MCF2
              (MCF.2 cell line derived transforming sequence) and two CpG
              islands, complete sequence
          Length = 174521

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     ttatttaatatttatatata 78
              ||||||||||||||||||||
Sbjct: 105137 ttatttaatatttatatata 105118



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>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the
              Slc17a1 gene for solute carrier family 17 (vesicular
              glutamate transporter) member 1, two genes for novel solute
              carrier family 17 (Slc17) members, two novel genes, the
              gene for a novel C3HC4 type zinc finger (ring finger)
              protein, the gene for an H2a, an H2b, two genes for H3 and
              two genes for H4 histone family members, a H2a histone
              family pseudogene, the H1f1 and  H1f2 genes for H1 histone
              family members 1 and 2, the H3f2 gene for H3 histone
              family, member 2 (H3.2), a novel pseudogene, the Hfe gene
              for hemochromatosis protein (Mr2) and two CpG islands,
              complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     atttaatatttatatataaa 80
              ||||||||||||||||||||
Sbjct: 120803 atttaatatttatatataaa 120822



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>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3
          Length = 349751

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 57     aattatttaatatttatatataaa 80
              ||||||||||||| ||||||||||
Sbjct: 311259 aattatttaatatatatatataaa 311282



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>gb|AC008114.25| Homo sapiens 12 BAC RP11-502N13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 126503

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tatttaatatttatatataa 79
             ||||||||||||||||||||
Sbjct: 16856 tatttaatatttatatataa 16837



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>emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 in linkage group 4 Contains
              the gene for a novel protein (zgc:56546), the gene for a
              novel protein similar to the Tctex-1 family, the gene for a
              novel protein similar to vertebrate tubby like protein 4
              (TULP4), the gene for a novel protein similar to vertebrate
              mitochondrial ribosomal protein S10 (MRPS10), the 3' end of
              a novel gene, two novel genes and three CpG islands,
              complete sequence
          Length = 189764

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     tatttaatatttatatataa 79
              ||||||||||||||||||||
Sbjct: 113619 tatttaatatttatatataa 113600



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 159     gccgcacaagcccaagggcg 178
               ||||||||||||||||||||
Sbjct: 2172568 gccgcacaagcccaagggcg 2172587



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>emb|BX511181.13| Zebrafish DNA sequence from clone DKEY-100H5 in linkage group 24,
             complete sequence
          Length = 160005

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    atttaatatttatatataaa 80
             ||||||||||||||||||||
Sbjct: 68451 atttaatatttatatataaa 68470



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>emb|BX569788.6| Zebrafish DNA sequence from clone CH211-161N19 in linkage group 10,
              complete sequence
          Length = 162115

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      tacatacatacatagacatg 25
              ||||||||||||||||||||
Sbjct: 104460 tacatacatacatagacatg 104479



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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 59      ttatttaatatttatatata 78
               ||||||||||||||||||||
Sbjct: 1351464 ttatttaatatttatatata 1351483



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>gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, complete sequence
          Length = 197191

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     atttaatatttatatataaa 80
              ||||||||||||||||||||
Sbjct: 154932 atttaatatttatatataaa 154951



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>ref|NM_165422.1| Drosophila melanogaster CG2944-RF, transcript variant F (gus), mRNA
          Length = 1939

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   tacatacatacatagacatg 25
           ||||||||||||||||||||
Sbjct: 347 tacatacatacatagacatg 328



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>ref|NM_165420.1| Drosophila melanogaster CG2944-RD, transcript variant D (gus), mRNA
          Length = 1855

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   tacatacatacatagacatg 25
           ||||||||||||||||||||
Sbjct: 347 tacatacatacatagacatg 328



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>dbj|AK134322.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030414P12
            product:unclassifiable, full insert sequence
          Length = 5121

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    tacatacatacatagacatg 25
            ||||||||||||||||||||
Sbjct: 2060 tacatacatacatagacatg 2079



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>gb|L36887.1|YSCMTCG03 Saccharomyces cerevisiae mitochondrion transfer RNA- Leu, Gln, Lys,
            Arg, Gly, Asp, Ser2, Arg2, Ala, Ile, Tyr, Asn genes
          Length = 6340

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   ttatttaatatttatatata 78
            ||||||||||||||||||||
Sbjct: 4459 ttatttaatatttatatata 4440



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>gb|AC100800.2| Homo sapiens chromosome 8, clone RP11-161I2, complete sequence
          Length = 196849

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     ttaatatttatatataaagg 82
              ||||||||||||||||||||
Sbjct: 184714 ttaatatttatatataaagg 184695



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>gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, complete sequence
          Length = 216706

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     ttaatatttatatataaagg 82
              ||||||||||||||||||||
Sbjct: 123843 ttaatatttatatataaagg 123824



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>gb|AC008256.5| Drosophila melanogaster, chromosome 2R, region 41C-41E, BAC clone
              BACR11B14, complete sequence
          Length = 174999

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      tacatacatacatagacatg 25
              ||||||||||||||||||||
Sbjct: 118334 tacatacatacatagacatg 118353



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>gb|AC013247.8| Drosophila melanogaster, chromosome 2R, region 41D-41E, BAC clone
              BACR06P07, complete sequence
          Length = 187793

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      tacatacatacatagacatg 25
              ||||||||||||||||||||
Sbjct: 177282 tacatacatacatagacatg 177263



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>gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone
              BACR16G12, complete sequence
          Length = 154681

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     gcaattatttaatatttatatata 78
              |||||||||| |||||||||||||
Sbjct: 125162 gcaattattttatatttatatata 125139



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>gb|AC021231.8| Homo sapiens chromosome , clone RP11-323I15, complete sequence
          Length = 185062

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     atagacatggggtacacaaa 36
              ||||||||||||||||||||
Sbjct: 143728 atagacatggggtacacaaa 143709



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 228      ccacgagttcttaccgatccagtacttggtcccgtc 263
                |||||||||| |  |||||||||||||||| |||||
Sbjct: 27868936 ccacgagttcctgacgatccagtacttggtgccgtc 27868901



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>gb|AC024153.22| Homo sapiens 12 BAC RP13-359K18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178905

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tatttaatatttatatataa 79
             ||||||||||||||||||||
Sbjct: 95516 tatttaatatttatatataa 95535



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>gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, region 36B-36B, BAC clone
              BACR27M18, complete sequence
          Length = 170362

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     gcaattatttaatatttata 74
              ||||||||||||||||||||
Sbjct: 148403 gcaattatttaatatttata 148422



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>gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complete sequence
          Length = 155011

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tatttaatatttatatataa 79
             ||||||||||||||||||||
Sbjct: 19800 tatttaatatttatatataa 19781



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>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1014_G12
          Length = 158830

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ttatttaatatttatatata 78
             ||||||||||||||||||||
Sbjct: 92385 ttatttaatatttatatata 92366



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>gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, complete sequence
          Length = 166305

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 57     aattatttaatatttatatataaa 80
              |||||||||| |||||||||||||
Sbjct: 105998 aattatttaaaatttatatataaa 105975



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>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665D10
          Length = 134967

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 228   ccacgagttcttaccgatccagtacttg 255
             ||||||||||||  ||||||||||||||
Sbjct: 23356 ccacgagttcttggcgatccagtacttg 23329



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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 228    ccacgagttcttaccgatccagtacttg 255
              ||||||||||||  ||||||||||||||
Sbjct: 172027 ccacgagttcttggcgatccagtacttg 172000



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>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1051E10
          Length = 207782

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 227  tccacgagttcttaccgatccagtactt 254
            |||||||||||||  |||||||||||||
Sbjct: 3517 tccacgagttcttggcgatccagtactt 3490



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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 227   tccacgagttcttaccgatccagtactt 254
             |||||||||||||  |||||||||||||
Sbjct: 80618 tccacgagttcttggcgatccagtactt 80591



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 227   tccacgagttcttaccgatccagtactt 254
             |||||||||||||  |||||||||||||
Sbjct: 58487 tccacgagttcttggcgatccagtactt 58514



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>emb|BX649477.10| Zebrafish DNA sequence from clone CH211-265K4 in linkage group 5,
             complete sequence
          Length = 148317

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tatttaatatttatatataa 79
             ||||||||||||||||||||
Sbjct: 92095 tatttaatatttatatataa 92114



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>emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 in linkage group 24,
             complete sequence
          Length = 199345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    atttaatatttatatataaa 80
             ||||||||||||||||||||
Sbjct: 89127 atttaatatttatatataaa 89146



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>dbj|AB159447.1| Bombyx mori DNA, chromosome 13, clone:534E24, complete sequence
          Length = 124898

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttatttaatatttatatata 78
             ||||||||||||||||||||
Sbjct: 74217 ttatttaatatttatatata 74236



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>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 228   ccacgagttcttaccgatccagtacttggtcccgtc 263
             |||||||||| |  |||||||||||||||| |||||
Sbjct: 77014 ccacgagttcctgacgatccagtacttggtgccgtc 76979



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>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full
           insert sequence
          Length = 1351

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 228 ccacgagttcttaccgatccagtacttggtcccgtc 263
           |||||||||| |  |||||||||||||||| |||||
Sbjct: 952 ccacgagttcctgacgatccagtacttggtgccgtc 917



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>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence
          Length = 214016

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      tacatacatacatagacatg 25
              ||||||||||||||||||||
Sbjct: 165582 tacatacatacatagacatg 165563



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>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full
            insert sequence
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 228  ccacgagttcttaccgatccagtacttggtcccgtc 263
            |||||||||| |  |||||||||||||||| |||||
Sbjct: 1038 ccacgagttcctgacgatccagtacttggtgccgtc 1003



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>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full
            insert sequence
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 228  ccacgagttcttaccgatccagtacttggtcccgtc 263
            |||||||||| |  |||||||||||||||| |||||
Sbjct: 1038 ccacgagttcctgacgatccagtacttggtgccgtc 1003



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>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6,
             complete sequence
          Length = 170067

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    attatttaatatttatatat 77
             ||||||||||||||||||||
Sbjct: 56538 attatttaatatttatatat 56519



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>gb|AC006196.3|AC006196 Homo sapiens, clone hRPK.1_A_1, complete sequence
          Length = 181949

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    caattatttaatatttatat 75
             ||||||||||||||||||||
Sbjct: 85787 caattatttaatatttatat 85806



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>emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 in linkage group 4,
             complete sequence
          Length = 195554

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tatttaatatttatatataa 79
             ||||||||||||||||||||
Sbjct: 87942 tatttaatatttatatataa 87961



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>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete
              sequence
          Length = 262525

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     gcaattatttaatatttata 74
              ||||||||||||||||||||
Sbjct: 203422 gcaattatttaatatttata 203403



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>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete
              sequence
          Length = 281782

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     ttatttaatatttatatata 78
              ||||||||||||||||||||
Sbjct: 154864 ttatttaatatttatatata 154845



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>gb|AE003817.3| Drosophila melanogaster chromosome 2R, section 33 of 73 of the complete
              sequence
          Length = 265472

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     gcaattatttaatatttatatata 78
              |||||||||| |||||||||||||
Sbjct: 229059 gcaattattttatatttatatata 229082



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>gb|AE003787.5| Drosophila melanogaster chromosome 2R, section 2 of 73 of the complete
             sequence
          Length = 294609

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tacatacatacatagacatg 25
             ||||||||||||||||||||
Sbjct: 43677 tacatacatacatagacatg 43696



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>gb|AC005643.1|AC005643 Drosophila melanogaster, chromosome 2R, region 50C5-50C8, P1 clone
             DS02972, complete sequence
          Length = 80389

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    gcaattatttaatatttatatata 78
             |||||||||| |||||||||||||
Sbjct: 15806 gcaattattttatatttatatata 15783



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>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds
          Length = 1353

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 228  ccacgagttcttaccgatccagtacttg 255
            ||||||||||||  ||||||||||||||
Sbjct: 1038 ccacgagttcttggcgatccagtacttg 1011



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>gb|AC154012.5| Mus musculus 6 BAC RP24-496L23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 116902

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    attatttaatatttatatat 77
             ||||||||||||||||||||
Sbjct: 40902 attatttaatatttatatat 40921



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>emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chromosome 4, complete
             sequence
          Length = 174746

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    atatttatatataaaggtat 85
             ||||||||||||||||||||
Sbjct: 87173 atatttatatataaaggtat 87154



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>emb|AL929578.4| Zebrafish DNA sequence from clone CH211-189L6, complete sequence
          Length = 142570

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 57    aattatttaatatttatatataaa 80
             |||| |||||||||||||||||||
Sbjct: 58751 aattctttaatatttatatataaa 58728



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>emb|X06047.1|MISCTRNA Yeast mitochondrial tRNA genes for tRNA-Ala, tRNA-Tyr and tRNA-Ile
          Length = 1847

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  ttatttaatatttatatata 78
           ||||||||||||||||||||
Sbjct: 519 ttatttaatatttatatata 500



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>gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
            clone KBrH020D15, complete sequence
          Length = 143633

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   atttaatatttatatataaa 80
            ||||||||||||||||||||
Sbjct: 6904 atttaatatttatatataaa 6885



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>emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chromosome 11, complete
            sequence
          Length = 242502

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    tacatacatacatagacatg 25
            ||||||||||||||||||||
Sbjct: 3194 tacatacatacatagacatg 3213



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>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete
              sequence
          Length = 211657

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      tacatacatacatagacatg 25
              ||||||||||||||||||||
Sbjct: 173078 tacatacatacatagacatg 173059



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>gb|M77350.1|MUSMHKA1A Mouse hair keratin A1 (MHKA1) gene, complete cds
          Length = 8061

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ggaggtgccatcatatgata 135
            ||||||||||||||||||||
Sbjct: 5090 ggaggtgccatcatatgata 5109



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>emb|AL592545.10| Mouse DNA sequence from clone RP23-374H24 on chromosome 11, complete
              sequence
          Length = 142565

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    ggaggtgccatcatatgata 135
              ||||||||||||||||||||
Sbjct: 122541 ggaggtgccatcatatgata 122522


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,643,551
Number of Sequences: 3902068
Number of extensions: 3643551
Number of successful extensions: 291263
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 289748
Number of HSP's gapped (non-prelim): 1515
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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