ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25e23 |
|---|---|
| Clone Library Name | barley_pub |
>GCP_ECOLI (P05852) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 337 Score = 58.9 bits (141), Expect = 1e-08 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 V++GGV++N+ +RA+L ++ +K ++ P CTDNG MIA+ G+ F AG Sbjct: 264 VMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAG------- 316 Query: 337 ADEPDDMQYDLRPRWPLGE 281 D+ +RPRWPL E Sbjct: 317 --ATADLGVSVRPRWPLAE 333
>GCP_SALTY (P40731) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 337 Score = 58.5 bits (140), Expect = 1e-08 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 V++GGV++N+ +RA+L ++ +K ++ P CTDNG MIA+ G+ F AG Sbjct: 264 VMAGGVSANRTLRAKLAEMMQKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAG------- 316 Query: 337 ADEPDDMQYDLRPRWPLGE 281 D+ +RPRWPL E Sbjct: 317 --VTADLGVTVRPRWPLAE 333
>GCP_RICPR (Q9ZEA8) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 387 Score = 56.2 bits (134), Expect = 7e-08 Identities = 23/50 (46%), Positives = 36/50 (72%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHF 368 V++GGVA+N+Y++ L+D G +L++PP LCTDN MIA+ G+E + Sbjct: 317 VIAGGVAANKYLQEILSDCTRPYGYRLIAPPMHLCTDNAAMIAYAGLERY 366
>GCP_HAEIN (P43764) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 342 Score = 55.8 bits (133), Expect = 9e-08 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 V++GGV++N+ +R L + + G ++ P P CTDNG MIA+TG G Sbjct: 269 VIAGGVSANKKLRETLAHLMQNLGGEVFYPQPQFCTDNGAMIAYTGFLRLKQG------- 321 Query: 337 ADEPDDMQYDLRPRWPLGE 281 + D+ D++PRW + E Sbjct: 322 --QHSDLAIDVKPRWAMAE 338
>GCP_PYRHO (O57716) Putative O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 324 Score = 52.8 bits (125), Expect = 8e-07 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAG 359 V+ GGVA+N +R L +AE G++ PP LC DNG MIA+TG+ + AG Sbjct: 249 VLVGGVAANNRLREMLKIMAEDRGVKFFVPPYDLCRDNGAMIAYTGLRMYKAG 301
>GCP_PYRAB (Q9UXT7) Putative O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 324 Score = 51.6 bits (122), Expect = 2e-06 Identities = 24/53 (45%), Positives = 33/53 (62%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAG 359 V+ GGVA+N +R L + E G++ PP LC DNG MIA+TG+ + AG Sbjct: 249 VLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAG 301
>GCP_SYNY3 (P74034) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 348 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/52 (44%), Positives = 30/52 (57%) Frame = -2 Query: 514 VSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAG 359 V GGVA+N +R L A+++ LQ+ PP CTDN MIA +HF G Sbjct: 272 VGGGVAANSRLRYHLQTAAQEHQLQVFFPPLKFCTDNAAMIACAAADHFQNG 323
>GCP_STRCO (O86793) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 374 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/54 (42%), Positives = 31/54 (57%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGR 356 ++ GGVA+N +RA + E G++L P P LCTDNG M+A G E R Sbjct: 275 MIGGGVAANSRLRALAQERCEAAGIRLRVPRPKLCTDNGAMVAALGAEMVARNR 328
>GCP_AQUAE (O66986) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 335 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAG 359 VV GGV++N +R +++ G +L P PSL TDN +MIA+ G+E F G Sbjct: 260 VVVGGVSANSRLREVFKKASQEYGFELYIPHPSLSTDNALMIAYAGMERFKRG 312
>GCP_BACSU (O05518) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 346 Score = 47.0 bits (110), Expect = 4e-05 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -2 Query: 517 VVSGGVASNQYVRARLN-DIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAG 359 +++GGVA+N+ +RA L + A+ G+ LV PP +LCTDN MIA G F G Sbjct: 270 LLAGGVAANRGLRAALEKEFAQHEGITLVIPPLALCTDNAAMIAAAGTIAFEKG 323
>GCP_METTH (O27476) Putative O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 534 Score = 46.6 bits (109), Expect = 5e-05 Identities = 19/46 (41%), Positives = 30/46 (65%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTG 380 ++ GGVA N+ +R L ++ +++ ++ PPP C DNG MIAW G Sbjct: 250 LLCGGVAVNRRLRDMLREMCQEHHVEFHMPPPEYCGDNGAMIAWLG 295
>GCP_PASHA (P36175) O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 325 Score = 46.6 bits (109), Expect = 5e-05 Identities = 21/46 (45%), Positives = 33/46 (71%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTG 380 V++GGV++N+ +RA L ++ +K ++ P P CTDNG MIA+TG Sbjct: 269 VMAGGVSANKQLRADLAEMMKKLKGEVFYPRPQFCTDNGAMIAYTG 314
>GCP_BORBU (O51710) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 346 Score = 45.8 bits (107), Expect = 9e-05 Identities = 23/51 (45%), Positives = 32/51 (62%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFV 365 V++GGVASN Y+R ++ +K +Q PP LCTDNG MIA G ++ Sbjct: 266 VIAGGVASNLYLREKI----DKLKIQTYYPPLDLCTDNGAMIAGLGFNMYL 312
>QRI7_YEAST (P43122) Putative protease QRI7 (EC 3.4.24.-)| Length = 407 Score = 45.1 bits (105), Expect = 2e-04 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Frame = -2 Query: 517 VVSGGVASNQYVRARLN-DIAEKNGLQLVS---PPPSLCTDNGVMIAWTGIE 374 V SGGV+SNQ +R +L ++ N + PP LC+DN +MI W GIE Sbjct: 321 VCSGGVSSNQRLRTKLETELGTLNSTSFFNFYYPPMDLCSDNSIMIGWAGIE 372
>GCP_METJA (Q58530) Putative O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 535 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/52 (40%), Positives = 27/52 (51%) Frame = -2 Query: 508 GGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRF 353 GGVA+N +R L + E + PP C DNG MIAW G+ GR+ Sbjct: 251 GGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGRW 302
>GCP_MOUSE (Q8BWU5) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (mOsgep) Length = 335 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/69 (33%), Positives = 33/69 (47%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 ++ GGV N ++ + + ++ G QL + C DNG MIA G E F AG PL Sbjct: 258 LIVGGVGCNLRLQEMMGTMCQERGAQLFATDERFCVDNGAMIAQAGWEMFQAG--HRTPL 315 Query: 337 ADEPDDMQY 311 D +Y Sbjct: 316 KDSAITQRY 324
>GCP_MYCTU (P65801) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 344 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/66 (37%), Positives = 32/66 (48%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 +++GGVA+N +R + G L P P LCTDNG MIA + AG P Sbjct: 270 LIAGGVAANSRLRELATQRCGEAGRTLRIPSPRLCTDNGAMIAAFAAQLVAAG--APPSP 327 Query: 337 ADEPDD 320 D P D Sbjct: 328 LDVPSD 333
>GCP_MYCBO (P65802) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 344 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/66 (37%), Positives = 32/66 (48%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 +++GGVA+N +R + G L P P LCTDNG MIA + AG P Sbjct: 270 LIAGGVAANSRLRELATQRCGEAGRTLRIPSPRLCTDNGAMIAAFAAQLVAAG--APPSP 327 Query: 337 ADEPDD 320 D P D Sbjct: 328 LDVPSD 333
>GCP_MYCLE (P37969) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 351 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/66 (39%), Positives = 31/66 (46%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 ++ GGVA+N +R GL L P P CTDNG MIA H +A PL Sbjct: 277 LIVGGVAANSRLRELAAQRCAAAGLMLRIPGPRFCTDNGAMIA-AFAAHLLAAAAPPSPL 335 Query: 337 ADEPDD 320 D P D Sbjct: 336 -DVPSD 340
>GCP_RAT (Q9WVS2) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Pasteurella haemolytica metalloprotease homolog with glycoprotein substrates/gpc-like protein 1) (Prsmg1/Gcpl1) (Fragment) Length = 322 Score = 38.9 bits (89), Expect = 0.011 Identities = 19/53 (35%), Positives = 28/53 (52%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAG 359 ++ GGV N ++ + + ++ G QL + C DNG MIA G E F AG Sbjct: 258 LIVGGVGCNVRLQEMMATMCQERGAQLFATDERFCIDNGAMIAQAGWEMFQAG 310
>GCP_HUMAN (Q9NPF4) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (hOSGEP) Length = 335 Score = 38.5 bits (88), Expect = 0.015 Identities = 22/69 (31%), Positives = 34/69 (49%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 ++ GGV N ++ + + ++ G +L + C DNG MIA G E F AG PL Sbjct: 258 LIVGGVGCNVRLQEMMATMCQERGARLFATDERFCIDNGAMIAQAGWEMFRAG--HRTPL 315 Query: 337 ADEPDDMQY 311 +D +Y Sbjct: 316 SDSGVTQRY 324
>GCP_XENLA (Q7SYR1) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| Length = 335 Score = 37.7 bits (86), Expect = 0.026 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGR 356 ++ GGV N ++ + + E+ G ++ + C DNG MIA G E F AG+ Sbjct: 258 LIVGGVGCNVRLQEMMGVMCEERGAKIFATDERFCIDNGAMIAQAGWEMFRAGQ 311
>GCP_TREPA (O83686) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 352 Score = 37.7 bits (86), Expect = 0.026 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAG 359 VV GGVA+N +R +A+ + V P CTDN VM+A G + + G Sbjct: 267 VVCGGVAANSLLR---KSVADWKHARCVFPSREYCTDNAVMVAALGYRYLIRG 316
>GCP_BUCBP (Q89B07) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 338 Score = 36.2 bits (82), Expect = 0.074 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTG 380 VVSGGV+ N +R +N I ++ ++ C+DN MIA+ G Sbjct: 265 VVSGGVSKNDVLRMHINRIIKQYNYKVFYSHLKYCSDNAAMIAYVG 310
>GCP_BUCAP (Q8KA56) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 337 Score = 35.0 bits (79), Expect = 0.17 Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEK--NGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDP 344 V++GGV++N +R R D+ E +G S CTDNG MIA+ G + R+++ Sbjct: 263 VIAGGVSANTVLRKRSKDMMENVFHGKVFYSSL-KFCTDNGAMIAYLG-----SLRYKEA 316 Query: 343 PLADEPDDMQYDLRPRWPL 287 ++ ++ ++P+W + Sbjct: 317 SVS----QLEIIVKPKWSI 331
>GCP_HALSA (Q9HNL6) Putative O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 532 Score = 34.7 bits (78), Expect = 0.22 Identities = 22/69 (31%), Positives = 30/69 (43%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRFEDPPL 338 V+ GGV N +R L + G +P P DN MIA G + AG P+ Sbjct: 248 VLGGGVGQNDRLRGMLEAMCAARGASFHAPEPRFLRDNAGMIAVLGAKMAAAG--ATIPV 305 Query: 337 ADEPDDMQY 311 AD + Q+ Sbjct: 306 ADSAINSQF 314
>GCP_HELPJ (Q9ZJ27) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 340 Score = 34.3 bits (77), Expect = 0.28 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = -2 Query: 514 VSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRF 353 + GG + N +R D+ + +LV P C+DN MI + +E + RF Sbjct: 269 IVGGASQNLALRKAFEDLCAEFDCELVLAPLEFCSDNAAMIGRSSLEAYQKKRF 322
>GCP_HALMA (P36174) Putative O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 548 Score = 33.1 bits (74), Expect = 0.63 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAG 359 V+ GGV N ++ L ++ E+ + +P DN MIA G + + AG Sbjct: 263 VLGGGVGQNARLQRMLGEMCEQREAEFYAPENRFLRDNAGMIAMLGAKMYAAG 315
>GCP_BUCAI (P57166) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 336 Score = 32.7 bits (73), Expect = 0.82 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = -2 Query: 517 VVSGGVASNQYVRARLNDIAEK--NGLQLVSPPPSLCTDNGVMIAWTG 380 V++GGV++NQ +R + + +K NG S CTDN MIA+ G Sbjct: 263 VIAGGVSANQKLRKKSEIMVKKNFNGTVFYS-SLEFCTDNAAMIAYLG 309
>GCP_HELPY (P55996) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)| (Glycoprotease) Length = 340 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -2 Query: 514 VSGGVASNQYVRARLNDIAEKNGLQLVSPPPSLCTDNGVMIAWTGIEHFVAGRF 353 + GG + N +R ++ + +LV P C+DN MI + +E + RF Sbjct: 269 IVGGASQNLALRKAFENLCDAFDCKLVLAPLEFCSDNAAMIGRSSLEAYQKKRF 322
>TLK1_CAEEL (P34314) Serine/threonine-protein kinase tousled-like 1 (EC| 2.7.11.1) (Tousled-like kinase 1) Length = 965 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Frame = +1 Query: 316 AYHQAHLPEVDLQIYRQQSARFQSKQS*HHCQY-KDLVEGIQAVGHSSQQYHSSGP*HTG 492 +YH H ++ Y QQ ++Q +Q+ HH Y + + Q SQQ + P + Sbjct: 169 SYHN-HQQQMQQMHYHQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQSQQQSAQQPQQSS 227 Query: 493 SMQHHLKQPLIIESVNTLNE 552 + H+ + + S ++++ Sbjct: 228 AALQHVNESSNLSSAGSISD 247
>ABDA_DROME (P29555) Homeobox protein abdominal-A| Length = 590 Score = 30.8 bits (68), Expect = 3.1 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 1/130 (0%) Frame = +1 Query: 88 SAQAFAANYCNDKIKSMWNSMAASGQDGWSQQTSCGESSASWM*VMDGS*LFSMIVKHFF 267 SA A++ N+ + S + S S ++ S + + GS S + +H Sbjct: 49 SASVSASSSSNNNSSNTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQH-- 106 Query: 268 LLHILRQEAILDASRTAYHQAHLPEVDLQ-IYRQQSARFQSKQS*HHCQYKDLVEGIQAV 444 L Q S ++ Q H P+V Q + QQ +Q HH QY L +Q Sbjct: 107 ----LGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQL- 161 Query: 445 GHSSQQYHSS 474 QQ+H S Sbjct: 162 --QQQQHHIS 169
>RF2_CAUCR (Q9A752) Peptide chain release factor 2 (RF-2)| Length = 371 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -2 Query: 358 RFEDPPLADEPDDMQYDLRPRWPLGEEYAEGRSVSRSLKTARIHPSLTSM 209 R EDP L D P + Q R R L + +S+ R LK A + L M Sbjct: 35 RVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLKDALEYAELAEM 84
>NALD2_MOUSE (Q9CZR2) N-acetylated-alpha-linked acidic dipeptidase 2 (EC| 3.4.17.21) (N-acetylated-alpha-linked acidic dipeptidase II) (NAALADase II) (Glutamate carboxypeptidase III) (GCPIII) (N-acetylaspartylglutamate peptidase II) (NAAG-peptidase II) Length = 740 Score = 29.3 bits (64), Expect = 9.1 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +3 Query: 195 RELCVMDVSDGWILAVFNDRETLLPSAYSSPRGHLGRKSY 314 R L +D+++ + + ND++ LL A+ P G GRK Y Sbjct: 638 RRLTQVDLNNPIAVRIMNDQQMLLERAFIDPLGLPGRKFY 677 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,591,694 Number of Sequences: 219361 Number of extensions: 1546194 Number of successful extensions: 3928 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3833 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3922 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
