ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24p16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthas... 373 e-100
2emb|AM039904.1| Hordeum vulgare mRNA for methionine synthase 1 e... 365 4e-98
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 96 5e-17
4dbj|AK099069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 5e-17
5dbj|AK067958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 5e-17
6dbj|AK065255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 5e-17
7dbj|AK062198.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 5e-17
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 96 5e-17
9emb|BX072547.2|CNS09S4Q Oryza sativa chromosome 12, . Partial se... 96 5e-17
10gb|AF439723.1|AF439723 Zea mays methionine synthase mRNA, partia... 94 2e-16
11dbj|AK067726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 2e-16
12gb|AY109415.1| Zea mays CL598_2 mRNA sequence 94 2e-16
13emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122... 94 2e-16
14emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014... 94 2e-16
15dbj|AK067757.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 5e-14
16emb|AM039905.1| Hordeum vulgare mRNA for methionine synthase 2 e... 82 8e-13
17gb|AY104793.1| Zea mays PCO079166 mRNA sequence 80 3e-12
18gb|BT009353.1| Triticum aestivum clone wlm96.pk0018.c10:fis, ful... 78 1e-11
19gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cyto... 78 1e-11
20gb|BT016781.1| Zea mays clone Contig614 mRNA sequence 72 8e-10
21gb|AY111481.1| Zea mays CL598_4 mRNA sequence 72 8e-10
22ref|NM_121798.2| Arabidopsis thaliana ATCIMS (COBALAMIN-INDEPEND... 62 7e-07
23gb|BT000691.1| Arabidopsis thaliana clone RAFL08-16-E05 (R11047)... 62 7e-07
24gb|AY091692.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, comp... 62 7e-07
25gb|AY070771.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, comp... 62 7e-07
26gb|AY069876.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, comp... 62 7e-07
27emb|AJ608673.1| Arabidopsis thaliana mRNA for cobalamin-independ... 62 7e-07
28gb|AY057499.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, comp... 62 7e-07
29gb|AY057478.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, comp... 62 7e-07
30gb|AY056098.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, comp... 62 7e-07
31dbj|AK221003.1| Arabidopsis thaliana mRNA for hypothetical prote... 62 7e-07
32dbj|AK222123.1| Arabidopsis thaliana mRNA for 5-methyltetrahydro... 62 7e-07
33gb|AY048201.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, comp... 62 7e-07
34gb|AF370522.1|AF370522 Arabidopsis thaliana cobalamin-independen... 62 7e-07
35emb|BX831470.1|CNS0A1W8 Arabidopsis thaliana Full-length cDNA Co... 62 7e-07
36emb|BX833585.1|CNS09Z4M Arabidopsis thaliana Full-length cDNA Co... 62 7e-07
37dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 62 7e-07
38gb|U97200.1|ATU97200 Arabidopsis thaliana cobalamin-independent ... 62 7e-07
39gb|AF220054.1|AF220054 Coffea arabica methionine synthase mRNA, ... 60 3e-06
40gb|AF096261.1|AF096261 Lycopersicon esculentum ethylene-responsi... 60 3e-06
41emb|X83499.1|CRMETS C.roseus MetE mRNA for methionine synthase 56 5e-05
42gb|BT012108.1| Arabidopsis thaliana At5g17920 mRNA sequence 54 2e-04
43gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 2e-04
44gb|AF518566.1| Glycine max methionine synthase mRNA, complete cds 54 2e-04
45gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genom... 54 2e-04
46gb|AF082893.1| Solanum tuberosum methionine synthase (MS) mRNA, ... 54 2e-04
47dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
48ref|XM_952059.1| Neurospora crassa OR74A hypothetical protein (N... 50 0.003
49ref|XM_326366.1| Neurospora crassa OR74A hypothetical protein (N... 50 0.003
50gb|AF404820.1|AF404820 Neurospora crassa methionine synthase (me... 50 0.003
51emb|Z49150.1|CBKPMETGN C.blumei kinetoplast met gene for cobalam... 50 0.003
52gb|U84889.1|MCU84889 Mesembryanthemum crystallinum methionine sy... 50 0.003
53ref|XM_469072.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.044
54gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.17
55gb|AC146417.3| Pan troglodytes BAC clone RP43-29B12 from 7, comp... 42 0.69
56emb|AL390766.16| Human DNA sequence from clone RP13-348N17 on ch... 42 0.69
57emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 40 2.7
58emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 2.7
59emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 2.7
60emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 40 2.7
61dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 2.7
62gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 2.7
63dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.7
64gb|AE000512.1| Thermotoga maritima MSB8, complete genome 40 2.7
65dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 2.7 
>dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds
          Length = 2558

 Score =  373 bits (188), Expect = e-100
 Identities = 206/215 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaagtggacacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgaca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2413 acaagtggacacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgaca 2354

                                                                        
Query: 61   tcctccttgcaattaaaannnnnnnagagctgctatacgagcactgcttactgcgccttg 120
            ||||||||||||||||||       |||||||||||||||||||||||||||||||||||
Sbjct: 2353 tcctccttgcaattaaaagggggggagagctgctatacgagcactgcttactgcgccttg 2294

                                                                        
Query: 121  gcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttgacc 180
            ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 2293 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 2234

                                               
Query: 181  tcggcgtacttgcgggtcttgagaccgcagtcggg 215
            |||||||||||||||||||||||||||||||||||
Sbjct: 2233 tcggcgtacttgcgggtcttgagaccgcagtcggg 2199
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>emb|AM039904.1| Hordeum vulgare mRNA for methionine synthase 1 enzyme (ms1 gene)
          Length = 2642

 Score =  365 bits (184), Expect = 4e-98
 Identities = 205/215 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaagtggacacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgaca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2458 acaagtggacacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgaca 2399

                                                                        
Query: 61   tcctccttgcaattaaaannnnnnnagagctgctatacgagcactgcttactgcgccttg 120
            ||||||||||||||||||       |||||||||||||||||||||||||||||||||||
Sbjct: 2398 tcctccttgcaattaaaagggggggagagctgctatacgagcactgcttactgcgccttg 2339

                                                                        
Query: 121  gcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttgacc 180
            ||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||
Sbjct: 2338 gcgagctcggcgcggatttgcttggcggcctcgaccatgttggtgagggcgggcttgacc 2279

                                               
Query: 181  tcggcgtacttgcgggtcttgagaccgcagtcggg 215
            |||||||||||||||||||||||||||||||||||
Sbjct: 2278 tcggcgtacttgcgggtcttgagaccgcagtcggg 2244
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                            
Query: 119      tggcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttga 178
                ||||||||| || ||||||  |||||| || |   ||||||||||| |||||||||||||
Sbjct: 26684320 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 26684261

                                                  
Query: 179      cctcggcgtacttgcgggtcttgagaccgcagtc 212
                |||||  |||||||||||||||||||||||||||
Sbjct: 26684260 cctcgttgtacttgcgggtcttgagaccgcagtc 26684227



 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 154      accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
                ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 26696135 accatgttggtgagggcaggcttcacctcggtgtacttgcgggtcttgagaccgcagtc 26696077
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>dbj|AK099069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163D13, full
            insert sequence
          Length = 2640

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 119  tggcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttga 178
            ||||||||| || ||||||  |||||| || |   ||||||||||| |||||||||||||
Sbjct: 2357 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2298

                                              
Query: 179  cctcggcgtacttgcgggtcttgagaccgcagtc 212
            |||||  |||||||||||||||||||||||||||
Sbjct: 2297 cctcgttgtacttgcgggtcttgagaccgcagtc 2264
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>dbj|AK067958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128E22, full
            insert sequence
          Length = 2058

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 119  tggcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttga 178
            ||||||||| || ||||||  |||||| || |   ||||||||||| |||||||||||||
Sbjct: 1724 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 1665

                                              
Query: 179  cctcggcgtacttgcgggtcttgagaccgcagtc 212
            |||||  |||||||||||||||||||||||||||
Sbjct: 1664 cctcgttgtacttgcgggtcttgagaccgcagtc 1631
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>dbj|AK065255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J12, full
            insert sequence
          Length = 2668

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 119  tggcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttga 178
            ||||||||| || ||||||  |||||| || |   ||||||||||| |||||||||||||
Sbjct: 2356 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2297

                                              
Query: 179  cctcggcgtacttgcgggtcttgagaccgcagtc 212
            |||||  |||||||||||||||||||||||||||
Sbjct: 2296 cctcgttgtacttgcgggtcttgagaccgcagtc 2263
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>dbj|AK062198.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G02, full
           insert sequence
          Length = 1064

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                       
Query: 119 tggcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttga 178
           ||||||||| || ||||||  |||||| || |   ||||||||||| |||||||||||||
Sbjct: 781 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 722

                                             
Query: 179 cctcggcgtacttgcgggtcttgagaccgcagtc 212
           |||||  |||||||||||||||||||||||||||
Sbjct: 721 cctcgttgtacttgcgggtcttgagaccgcagtc 688
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                            
Query: 119      tggcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttga 178
                ||||||||| || ||||||  |||||| || |   ||||||||||| |||||||||||||
Sbjct: 26612489 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 26612430

                                                  
Query: 179      cctcggcgtacttgcgggtcttgagaccgcagtc 212
                |||||  |||||||||||||||||||||||||||
Sbjct: 26612429 cctcgttgtacttgcgggtcttgagaccgcagtc 26612396



 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 154      accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
                ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 26624304 accatgttggtgagggcaggcttcacctcggtgtacttgcgggtcttgagaccgcagtc 26624246
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>emb|BX072547.2|CNS09S4Q Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0090N22
            of library OSJNBb from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 8623

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 119  tggcgagctcggcgcggatctgcttggnggnctcgaccatgttggtgagggcgggcttga 178
            ||||||||| || ||||||  |||||| || |   ||||||||||| |||||||||||||
Sbjct: 2904 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2845

                                              
Query: 179  cctcggcgtacttgcgggtcttgagaccgcagtc 212
            |||||  |||||||||||||||||||||||||||
Sbjct: 2844 cctcgttgtacttgcgggtcttgagaccgcagtc 2811
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>gb|AF439723.1|AF439723 Zea mays methionine synthase mRNA, partial cds
          Length = 2300

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                        
Query: 153  gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            |||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 2256 gaccatgttggtcagggcgggcttgacctccgtgtacttgcgggtcttgaggccgcagtc 2197

               
Query: 213  ggg 215
            |||
Sbjct: 2196 ggg 2194
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>dbj|AK067726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O11, full
            insert sequence
          Length = 2783

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 2441 accatgttggtgagggcaggcttcacctcggtgtacttgcgggtcttgagaccgcagtc 2383
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>gb|AY109415.1| Zea mays CL598_2 mRNA sequence
          Length = 3017

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                       
Query: 153 gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
           |||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 675 gaccatgttggtcagggcgggcttgacctccgtgtacttgcgggtcttgaggccgcagtc 734

              
Query: 213 ggg 215
           |||
Sbjct: 735 ggg 737
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>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 83015

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 154   accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
             ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 74992 accatgttggtgagggcaggcttcacctcggtgtacttgcgggtcttgagaccgcagtc 75050
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>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 104849

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                         
Query: 154    accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
              ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 102843 accatgttggtgagggcaggcttcacctcggtgtacttgcgggtcttgagaccgcagtc 102901
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>dbj|AK067757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H17, full
            insert sequence
          Length = 2627

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||
Sbjct: 2322 accatgttggtgagggcaggcttcacctctgtgtacttgcgggtcttgagaccgcagtc 2264
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>emb|AM039905.1| Hordeum vulgare mRNA for methionine synthase 2 enzyme (ms2 gene)
          Length = 2675

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 152  cgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagt 211
            |||||||||| || ||||||||||| ||||||| |||||||||||||||||| |||||||
Sbjct: 2340 cgaccatgttagtcagggcgggcttcacctcggtgtacttgcgggtcttgaggccgcagt 2281

             
Query: 212  c 212
            |
Sbjct: 2280 c 2280
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>gb|AY104793.1| Zea mays PCO079166 mRNA sequence
          Length = 2720

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                        
Query: 153  gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            |||||||||||| ||||||||||||||||| | ||||||||| ||||||||||| |||||
Sbjct: 2365 gaccatgttggtcagggcgggcttgacctccgtgtacttgcgtgtcttgagaccacagtc 2306
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>gb|BT009353.1| Triticum aestivum clone wlm96.pk0018.c10:fis, full insert mRNA
            sequence
          Length = 2634

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||||| ||||||||||| ||||| | |||||||||||||||||| ||||||||
Sbjct: 2329 accatgttggtcagggcgggcttcacctccgtgtacttgcgggtcttgaggccgcagtc 2271
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>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like
             protein, putative DNA-binding protein homolog,
             TATA-binding protein, hypothetical protein M3E9.200,
             3-glucanase, K-exchanger-like protein, small heat
             shock-like protein, methionine synthase protein, putative
             far-red impaired response protein, and putative vegetative
             storage protein genes, complete cds
          Length = 100773

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                        
Query: 154   accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
             ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||| |||||
Sbjct: 72721 accatgttggtcagggcgggcttgacctccgtgtacttgcgtgtcttgagaccacagtc 72779
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>gb|BT016781.1| Zea mays clone Contig614 mRNA sequence
          Length = 1759

 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                        
Query: 153  gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            |||||||||||| ||||| ||||| ||||| | ||||||||| |||||||||||||||||
Sbjct: 1359 gaccatgttggtcagggcaggcttcacctccgtgtacttgcgtgtcttgagaccgcagtc 1300
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>gb|AY111481.1| Zea mays CL598_4 mRNA sequence
          Length = 664

 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 153 gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
           |||||||||||| ||||| ||||| ||||| | ||||||||| |||||||||||||||||
Sbjct: 334 gaccatgttggtcagggcaggcttcacctccgtgtacttgcgtgtcttgagaccgcagtc 393
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>ref|NM_121798.2| Arabidopsis thaliana ATCIMS (COBALAMIN-INDEPENDENT METHIONINE
            SYNTHASE);
            5-methyltetrahydropteroyltriglutamate-homocysteine
            S-methyltransferase AT5G17920 (ATCIMS) mRNA, complete cds
          Length = 2682

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2344 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2286
to top
>gb|BT000691.1| Arabidopsis thaliana clone RAFL08-16-E05 (R11047) putative
            5-methyltetrahydropteroyltriglutamate--homocysteine
            S-methyltransferase (At5g17920) mRNA, complete cds
          Length = 2585

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2337 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2279
to top
>gb|AY091692.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds
          Length = 2298

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2252 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2194
to top
>gb|AY070771.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds
          Length = 2648

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2334 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2276
to top
>gb|AY069876.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds
          Length = 2594

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2334 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2276
to top
>emb|AJ608673.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine
            synthase (atms1 gene)
          Length = 2326

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2257 accatgttcttgagcgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2199
to top
>gb|AY057499.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds
          Length = 2613

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2334 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2276
to top
>gb|AY057478.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds
          Length = 2608

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2334 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2276
to top
>gb|AY056098.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds
          Length = 2460

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2334 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2276
to top
>dbj|AK221003.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL22-65-M04
          Length = 390

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 154 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
           ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 68  accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 10
to top
>dbj|AK222123.1| Arabidopsis thaliana mRNA for
            5-methyltetrahydropteroyltriglutamate--homocysteine
            S-methyltransferase, complete cds, clone: RAFL22-94-C14
          Length = 1684

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 1362 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 1304
to top
>gb|AY048201.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds
          Length = 2549

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2334 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2276
to top
>gb|AF370522.1|AF370522 Arabidopsis thaliana cobalamin-independent methionine synthase
            (MPI7.9) mRNA, complete cds
          Length = 2646

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2334 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2276
to top
>emb|BX831470.1|CNS0A1W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS94ZC02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1156

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 154 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
           ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 882 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 824
to top
>emb|BX833585.1|CNS09Z4M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL64ZC05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 601

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 154 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
           ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 284 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 226
to top
>dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7
          Length = 40548

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 154   accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
             ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 39698 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 39640
to top
>gb|U97200.1|ATU97200 Arabidopsis thaliana cobalamin-independent methionine synthase
            (ATCIMS) mRNA, complete cds
          Length = 2595

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 2260 accatgttcttgagtgcaggcttgacctcggtgtacttacgggtcttgagaccacagtc 2202
to top
>gb|AF220054.1|AF220054 Coffea arabica methionine synthase mRNA, partial cds
          Length = 680

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 165 gagggcgggcttgacctcggcgtacttgcgggtcttgagacc 206
           |||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 600 gagggccggcttcacctcagcgtacttgcgggtcttgagacc 559
to top
>gb|AF096261.1|AF096261 Lycopersicon esculentum ethylene-responsive methionine synthase
           (ER69) mRNA, partial cds
          Length = 206

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 166 agggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggg 215
           ||||| ||||| ||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 171 agggctggcttcacctcggtgtacttgcgagtcttgagaccacagtcggg 122
to top
>emb|X83499.1|CRMETS C.roseus MetE mRNA for methionine synthase
          Length = 2602

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 184  gcgtacttgcgggtcttgagaccgcagtcggg 215
            ||||||||||||||||||||||| ||||||||
Sbjct: 2272 gcgtacttgcgggtcttgagaccacagtcggg 2241
to top
>gb|BT012108.1| Arabidopsis thaliana At5g17920 mRNA sequence
          Length = 2295

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||||||  |||| || |||||| |||||| |||||| |||||||||||||| |||||
Sbjct: 2249 accatgttcttgagtgcaggcttggcctcggtgtacttacgggtcttgagaccacagtc 2191
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 154      accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgc 208
                ||||||||||| || || || || ||||||| ||| |||||||||||||||||||
Sbjct: 25306402 accatgttggttagtgcaggtttcacctcggtgtatttgcgggtcttgagaccgc 25306348
to top
>gb|AF518566.1| Glycine max methionine synthase mRNA, complete cds
          Length = 2695

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 154  accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            |||||||| |||||||| ||||| ||||| | |||||| ||||||||||| || |||||
Sbjct: 2326 accatgtttgtgagggctggcttcacctcagtgtacttacgggtcttgagcccacagtc 2268
to top
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete
              sequence
          Length = 152828

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                     
Query: 154    accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgc 208
              ||||||||||| || || || || ||||||| ||| |||||||||||||||||||
Sbjct: 136958 accatgttggttagtgcaggtttcacctcggtgtatttgcgggtcttgagaccgc 137012
to top
>gb|AF082893.1| Solanum tuberosum methionine synthase (MS) mRNA, complete cds
          Length = 2644

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 166  agggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||| ||||| ||||||| ||||||||| ||||||||||| |||||
Sbjct: 2296 agggctggcttcacctcggtgtacttgcgagtcttgagaccacagtc 2250
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 154      accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgc 208
                ||||||||||| || || || || ||||||| ||| |||||||||||||||||||
Sbjct: 25397711 accatgttggttagtgcaggtttcacctcggtgtatttgcgggtcttgagaccgc 25397657
to top
>ref|XM_952059.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial
            mRNA
          Length = 2310

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 141  cttggnggnctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 200
            ||||| || ||| ||||||| || ||||||   |||||||||  |  |||||||||||||
Sbjct: 2277 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2218

                           
Query: 201  gagaccgcagtcggg 215
             ||||||||||||||
Sbjct: 2217 aagaccgcagtcggg 2203
to top
>ref|XM_326366.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial
            mRNA
          Length = 2310

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 141  cttggnggnctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 200
            ||||| || ||| ||||||| || ||||||   |||||||||  |  |||||||||||||
Sbjct: 2277 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2218

                           
Query: 201  gagaccgcagtcggg 215
             ||||||||||||||
Sbjct: 2217 aagaccgcagtcggg 2203
to top
>gb|AF404820.1|AF404820 Neurospora crassa methionine synthase (met-8) gene, complete cds
          Length = 3269

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 141  cttggnggnctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 200
            ||||| || ||| ||||||| || ||||||   |||||||||  |  |||||||||||||
Sbjct: 2643 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2584

                           
Query: 201  gagaccgcagtcggg 215
             ||||||||||||||
Sbjct: 2583 aagaccgcagtcggg 2569
to top
>emb|Z49150.1|CBKPMETGN C.blumei kinetoplast met gene for cobalamine-independent methionine
            synthase
          Length = 2795

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 172  ggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 212
            ||||| ||||| ||||| ||||||||||||||||| |||||
Sbjct: 2412 ggcttcacctcagcgtatttgcgggtcttgagaccacagtc 2372
to top
>gb|U84889.1|MCU84889 Mesembryanthemum crystallinum methionine synthase (MetE) mRNA,
            complete cds
          Length = 2734

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 175  ttgacctcggcgtacttgcgggtcttgagaccgcagtcggg 215
            ||||||||  ||||||| |||||||||||||| ||||||||
Sbjct: 2351 ttgacctcaccgtacttacgggtcttgagaccacagtcggg 2311
to top
>ref|XM_469072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1149

 Score = 46.1 bits (23), Expect = 0.044
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 178 acctcggcgtacttgcgggtcttgagaccgc 208
           ||||||| ||| |||||||||||||||||||
Sbjct: 944 acctcggtgtatttgcgggtcttgagaccgc 974
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 190     ttgcgggtcttgagaccgcagtcggg 215
               |||||||||||||| |||||||||||
Sbjct: 2998441 ttgcgggtcttgagcccgcagtcggg 2998416



 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    cgccttggcgagctcggcgcg 134
              |||||||||||||||||||||
Sbjct: 384455 cgccttggcgagctcggcgcg 384475
to top
>gb|AC146417.3| Pan troglodytes BAC clone RP43-29B12 from 7, complete sequence
          Length = 196843

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     ccagattattcaaagtaaaac 38
              |||||||||||||||||||||
Sbjct: 160771 ccagattattcaaagtaaaac 160791
to top
>emb|AL390766.16| Human DNA sequence from clone RP13-348N17 on chromosome 10 Contains part
              of the PARD3 gene for par-3 partitioning defective 3
              homolog (C.elegans), complete sequence
          Length = 193131

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     ccagattattcaaagtaaaac 38
              |||||||||||||||||||||
Sbjct: 157149 ccagattattcaaagtaaaac 157169
to top
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   cgccttggcgagctcggcgcggat 137
             ||||||||||||||||| ||||||
Sbjct: 61299 cgccttggcgagctcggggcggat 61276
to top
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 114    cgccttggcgagctcggcgcggat 137
              ||||||||||||||||| ||||||
Sbjct: 344059 cgccttggcgagctcggggcggat 344036
to top
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 114    cgccttggcgagctcggcgcggat 137
              ||||||||||||||||| ||||||
Sbjct: 134631 cgccttggcgagctcggggcggat 134654
to top
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 192    gcgggtcttgagaccgcagtcggg 215
              ||||||||| ||||||||||||||
Sbjct: 136480 gcgggtcttcagaccgcagtcggg 136457
to top
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     cgggtcttgagaccgcagtc 212
               ||||||||||||||||||||
Sbjct: 2186998 cgggtcttgagaccgcagtc 2186979
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 192     gcgggtcttgagaccgcagtcggg 215
               |||||||||||| |||||||||||
Sbjct: 3542175 gcgggtcttgaggccgcagtcggg 3542198
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 192     gcgggtcttgagaccgcagtcggg 215
               ||||||||| ||||||||||||||
Sbjct: 2498626 gcgggtcttcagaccgcagtcggg 2498603
to top
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 196     gtcttgagaccgcagtcggg 215
               ||||||||||||||||||||
Sbjct: 1313139 gtcttgagaccgcagtcggg 1313158
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 167     gggcgggcttgacctcggcgtact 190
               |||||| |||||||||||||||||
Sbjct: 1408386 gggcggccttgacctcggcgtact 1408363


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,086,124
Number of Sequences: 3902068
Number of extensions: 1086124
Number of successful extensions: 69568
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69003
Number of HSP's gapped (non-prelim): 563
length of query: 215
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 193
effective length of database: 17,147,199,772
effective search space: 3309409555996
effective search space used: 3309409555996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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