Clone Name | rbasd25e21 |
---|---|
Clone Library Name | barley_pub |
>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast| precursor Length = 374 Score = 36.6 bits (83), Expect = 0.026 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -2 Query: 390 DLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPP 280 D WG P+P+S+ A P NDD WG APPP Sbjct: 98 DEWGEPGVPEPQSTSAADPPT---NDDEWGGDPAPPP 131
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 32.7 bits (73), Expect = 0.37 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -2 Query: 372 AAPQPKSSGK-ALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLG 208 AAP P+ K A +PA A APP A A A+SG GA P PK G Sbjct: 106 AAPGPRPGPKPAPRPAPAAPAPAAPEFTAPPSAPAAPAAAASGPRPGARPGAPKPG 161
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 32.0 bits (71), Expect = 0.64 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 6/58 (10%) Frame = -2 Query: 372 AAPQP----KSSGKALKPAAANNDDLWGAI--AAPPPATKARPLASSGRGRGAXPAQP 217 AAP+P K + A KPA A A AAP P +A+P A++ G A PA P Sbjct: 79 AAPKPGAPAKPAAPAAKPAPAAPSAASAAKPGAAPKPGVQAKPAAAAKPGAPAKPAAP 136 Score = 28.1 bits (61), Expect = 9.2 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = -2 Query: 372 AAPQPKSSGKALKPAAANNDDLWGAIAAPPP---ATKARPLASSG 247 AAP SG A KPAAA A + P P A KA P A G Sbjct: 137 AAPSAAKSGSAPKPAAAAKP----AFSGPTPGDAAKKAEPAAKPG 177
>BACA_BACLI (O68006) Bacitracin synthetase 1 (BA1) [Includes: ATP-dependent| isoleucine adenylase (IleA) (Isoleucine activase); ATP-dependent cysteine adenylase (CysA) (Cysteine activase); ATP-dependent leucine adenylase (LeuA) (Leucine activase); ATP-depe Length = 5255 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +2 Query: 26 LYNGQSSSNVHVVINDWASLQRGSPRHVKDKRKGEKVASLYNNCIMALYMPVEEVLPI 199 LY G+S H+ D+A + R + KR+ E Y I L +P++ P+ Sbjct: 2848 LYEGKSLKPFHIQYKDYAEWENSHARSEELKRQEEYWLKTYKGDIPVLDLPIDHKRPL 2905
>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2| Length = 913 Score = 30.4 bits (67), Expect = 1.9 Identities = 24/63 (38%), Positives = 32/63 (50%) Frame = -2 Query: 375 IAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLGAQXI 196 +AA QP + +A +PA+ A AAP P T ARP +++ R A PA P A Sbjct: 187 VAASQPAAEVRA-EPASERP----AAAAAPAPRTDARPQSAAAAPRSA-PATPDAAAPRG 240 Query: 195 GRT 187 RT Sbjct: 241 RRT 243
>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) Length = 863 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -2 Query: 345 KALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLGAQXIGRTSS 181 +A +P +A+ L + AP PA ARP +SS P+LG RT++ Sbjct: 787 RASRPLSASQPSLPHGVPAPSPAASARPASSS---------TPRLGPAPTARTAA 832
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 30.0 bits (66), Expect = 2.4 Identities = 20/56 (35%), Positives = 23/56 (41%) Frame = -2 Query: 369 APQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLGAQ 202 A P ++ PAAA N GA AP PA S G GA A P G + Sbjct: 288 AGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVK 343
>SNI2_YEAST (P38163) Protein SNI2 (Suppressor of RHO3 protein 77)| Length = 1010 Score = 29.6 bits (65), Expect = 3.2 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = -2 Query: 393 DDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATK----ARPLASSGRGRG 235 D+L G I P+ K A+ ++ A PP TK ARP+ SSGR G Sbjct: 904 DELLGGIERPESKYEESAIARGCISSSSS-NAARKLPPGTKDHRYARPVRSSGRSNG 959
>PARG_RAT (Q9QYM2) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)| Length = 972 Score = 29.6 bits (65), Expect = 3.2 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 7/52 (13%) Frame = +3 Query: 282 AGVLQWHPIGRHYSLLLASKPXQMILAEVQLLN-------PRDHHHHCSDTE 416 AGV +WH G L AS+P + A QL N P D H SDT+ Sbjct: 150 AGVCKWHSAGERAEQLSASEPSAVTQAPKQLSNANIDQSPPTDGH---SDTD 198
>GCP60_HUMAN (Q9H3P7) Golgi resident protein GCP60 (Acyl-CoA-binding| domain-containing protein 3) (Golgi phosphoprotein 1) (GOLPH1) (Golgi complex-associated protein 1) (GOCAP1) (PBR- and PKA-associated protein 7) (Peripherial benzodiazepine receptor-asso Length = 527 Score = 29.6 bits (65), Expect = 3.2 Identities = 19/52 (36%), Positives = 20/52 (38%) Frame = -2 Query: 348 GKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLGAQXIG 193 G L P GA PPP P SGRG GA QP+ G G Sbjct: 15 GLTLSPDPEERPGAEGAPLLPPPLPPPSP-PGSGRGPGASGEQPEPGEAAAG 65
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 29.6 bits (65), Expect = 3.2 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = -2 Query: 372 AAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSG 247 AAP P A P A D+L+ A+ PA R LA SG Sbjct: 33 AAPTPSGPPAAAAPPGAPGDELYAALEDYHPAELYRALAVSG 74
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 29.6 bits (65), Expect = 3.2 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Frame = -2 Query: 372 AAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGR------GRGAXPAQPKL 211 A P PK + KA AAA G P P P+A +G G PA PK Sbjct: 69 AKPGPKPAAKAAPKAAAKPGPKPGPKPGPQPVKNTNPVAGAGTRPTSTVKPGEKPA-PKP 127 Query: 210 GAQXIGRTSS 181 GA+ +T++ Sbjct: 128 GAKPAPKTAA 137
>LMD1_HUMAN (P29536) Leiomodin-1 (Leiomodin, muscle form) (64 kDa autoantigen| D1) (64 kDa autoantigen 1D) (64 kDa autoantigen 1D3) (Thyroid-associated ophthalmopathy autoantigen) (Smooth muscle leiomodin) (SM-Lmod) Length = 572 Score = 29.3 bits (64), Expect = 4.1 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = -2 Query: 381 GSIAAPQPKSSGK-ALKPAAANNDDLWGAIAAPPPATK--ARPLASSGRGRGAXPA-QPK 214 G++A PK S + + KP+ N+ GA AAPPP A PL PA Q K Sbjct: 474 GAVAKGSPKPSPQPSPKPSPKNSPKKGGAPAAPPPPPPPLAPPLIMENLKNSLSPATQRK 533 Query: 213 LG 208 +G Sbjct: 534 MG 535
>FA44A_HUMAN (Q8NFC6) Protein FAM44A| Length = 502 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = -2 Query: 288 PPPATKARPLASSGRGRGAXPAQPKLGAQXIGRTSSTGM 172 PPP A P A G GA P+L A + S G+ Sbjct: 28 PPPGPGAGPGAGGAGGAGAGAGDPQLVAMIVNHLKSQGL 66
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 14/62 (22%) Frame = -2 Query: 369 APQPKSSGKALKPAAANNDDLWGAIAAPP--------------PATKARPLASSGRGRGA 232 +P P S + + PA LW A PP P++ RPL SS G Sbjct: 94 SPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGP 153 Query: 231 XP 226 P Sbjct: 154 EP 155
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 14/62 (22%) Frame = -2 Query: 369 APQPKSSGKALKPAAANNDDLWGAIAAPP--------------PATKARPLASSGRGRGA 232 +P P S + + PA LW A PP P++ RPL SS G Sbjct: 94 SPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGP 153 Query: 231 XP 226 P Sbjct: 154 EP 155
>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 1008 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/61 (31%), Positives = 26/61 (42%) Frame = -2 Query: 360 PKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLGAQXIGRTSS 181 P+SSGK ++ D A PP A KA P G+G + K G G+ + Sbjct: 481 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATG---GKGDPLSSEKAGLVASGKAAP 537 Query: 180 T 178 T Sbjct: 538 T 538
>PRGR_RABIT (P06186) Progesterone receptor (PR)| Length = 930 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = -2 Query: 297 IAAPPPATKARPLASSGRGRGAXPAQPKLGAQXIGRTSSTGM*SAMIQLLYK 142 +AAPPP + + SS G A A P G+ + +SS+G S + +LYK Sbjct: 418 LAAPPPPSLPPRVPSSRPGEAAVAASP--GSASVSSSSSSG--STLECILYK 465
>ADRB1_HUMAN (P08588) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 477 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -2 Query: 381 GSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGA 232 G +A P P S P AA++DD + A PPA P A G A Sbjct: 413 GCLARPGPPPS-----PGAASDDDDDDVVGATPPARLLEPWAGCNGGAAA 457
>MRP6_RAT (O88269) Multidrug resistance-associated protein 6 (ATP-binding| cassette sub-family C member 6) (MRP-like protein 1) (MLP-1) Length = 1502 Score = 28.9 bits (63), Expect = 5.4 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 1/96 (1%) Frame = -2 Query: 369 APQPKSSGKALKPAAANNDDLWGAIAAPPPATK-ARPLASSGRGRGAXPAQPKLGAQXIG 193 A QP G+ AAA +DDL G P + RP S ++ ++ + Sbjct: 852 ARQPAGEGEGEAHAAATSDDLGGFSGGGTPTRRPERPRPSDAAPVKGSTSEAQM-EPSLD 910 Query: 192 RTSSTGM*SAMIQLLYKDATFSPFLLSLTCLGDPLC 85 TG+ + + Y + +L L +G PLC Sbjct: 911 DVEVTGLTAGEDSVQYGRVKSATYLSYLRAVGTPLC 946
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 14/62 (22%) Frame = -2 Query: 369 APQPKSSGKALKPAAANNDDLWGAIAAPP--------------PATKARPLASSGRGRGA 232 +P P S + + PA LW A PP P++ RPL SS G Sbjct: 94 SPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGP 153 Query: 231 XP 226 P Sbjct: 154 EP 155
>MTDH1_STYHU (Q43137) Probable mannitol dehydrogenase 1 (EC 1.1.1.255)| (NAD-dependent mannitol dehydrogenase 1) Length = 354 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 8 DYTIVILYNGQSSSNVHVVINDW 76 D T+ ILY G S++H V NDW Sbjct: 32 DVTLKILYCGVCHSDLHTVKNDW 54
>EPN1_RAT (O88339) Epsin-1 (EPS-15-interacting protein 1)| Length = 575 Score = 28.5 bits (62), Expect = 7.1 Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Frame = -2 Query: 390 DLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATK---ARPLASSG-RGRGAXPA 223 D WG P S A+ P AA D WGA A PP A A P +SG R A P Sbjct: 274 DPWGG-----PASVPTAV-PVAAAASDPWGAPAVPPAADPWGGAAPTPASGDPWRPAAPT 327 Query: 222 QPKL 211 P + Sbjct: 328 GPSV 331
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 28.5 bits (62), Expect = 7.1 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 14/70 (20%) Frame = -2 Query: 369 APQPKSSGKA---LKPAAANNDDLWGAIAA-----------PPPATKARPLASSGRGRGA 232 AP P+S+ K + P+A D G + P P +RP + + GR A Sbjct: 167 APTPRSANKPSSPVPPSAGGKDPRAGQTSTTSKATTVSGGGPRPKIVSRPQSPTAPGRSA 226 Query: 231 XPAQPKLGAQ 202 PA+P + ++ Sbjct: 227 PPAKPSIPSE 236
>ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 252 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 10/45 (22%) Frame = -2 Query: 321 NNDDLWGAIAAPPPATKARPLAS----------SGRGRGAXPAQP 217 ++DD W P PA +ARP A+ +G G GA P+ P Sbjct: 78 DDDDDWPDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGADPSHP 122
>ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 245 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 10/45 (22%) Frame = -2 Query: 321 NNDDLWGAIAAPPPATKARPLAS----------SGRGRGAXPAQP 217 ++DD W P PA +ARP A+ +G G GA P+ P Sbjct: 71 DDDDDWPDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGANPSHP 115
>YCE7_YEAST (P25576) Hypothetical 29.7 kDa protein in APA1/DTP-PDI1 intergenic| region Length = 258 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = +2 Query: 47 SNVHVVINDWASLQRGSPRHVKDKRKGEKVASLYNNCIMALY 172 + +HV+ ND+ +L+ S +++K K +V SL + + +Y Sbjct: 206 ARIHVMQNDYPALRNVSSSEIRNKLKNGQVESLKDELPLCIY 247
>ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 263 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 10/45 (22%) Frame = -2 Query: 321 NNDDLWGAIAAPPPATKARPLAS----------SGRGRGAXPAQP 217 ++DD W P PA +ARP A+ +G G GA P+ P Sbjct: 77 DDDDDWPDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGANPSHP 121
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -2 Query: 345 KALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXP 226 +A +P +A+ L AP PA ARP +SS G P Sbjct: 787 RASRPLSASQPSLPHGAPAPSPAASARPASSSTPRLGPAP 826
>RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)| Length = 248 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 10/45 (22%) Frame = -2 Query: 321 NNDDLWGAIAAPPPATKARPLASS----------GRGRGAXPAQP 217 ++DD W P PA +ARP A++ G G GA P+ P Sbjct: 77 DDDDDWPDSPPPEPAPEARPTAAAPRPRPPPPGVGPGGGADPSHP 121
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 28.5 bits (62), Expect = 7.1 Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 6/57 (10%) Frame = -2 Query: 369 APQPKSSGKALKPAAANNDDLWGAIAAPPPA------TKARPLASSGRGRGAXPAQP 217 AP PK G A KP A GA+AAP P T A+P A PA+P Sbjct: 76 APAPKP-GTAQKPTAPTP----GAVAAPKPGTAAAKPTPAKPAAPKPTAAKPAPAKP 127
>DOP1_EMENI (Q9Y7B3) Protein dopey| Length = 1858 Score = 28.5 bits (62), Expect = 7.1 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 10/108 (9%) Frame = -2 Query: 393 DDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPP-----ATKARPLASSGRGRGAX 229 DDL I A ++G + + N LW + P P + +ARP SS + A Sbjct: 331 DDLQRLIVA----AAGVVSRRDMSLNRRLWAWLLGPDPVGDRASFEARPSISSTASKTAA 386 Query: 228 PAQPKLGAQXIGRTSSTGM*SAMIQLLYKDATF-----SPFLLSLTCL 100 ++ +Q R + S ++QLL +D PF ++L+ + Sbjct: 387 ESEELSQSQYFSRFGLQPLASGLLQLLKRDTELPSEKAKPFRITLSLM 434
>HMX_STRPU (Q26656) Homeobox protein Hmx (SpHmx) (H6-like) (Fragment)| Length = 405 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -2 Query: 405 YNDDDDLWGSIAAP--QPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRG 235 Y DDDD + + P QP++ G +++ + D + +PP + + ++S+G G Sbjct: 52 YQDDDDSYRTHTPPPSQPRTKGFSIESILSPTDKHRKSPRSPPMSPSSPSMSSNGYSEG 110
>KLH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin)| Length = 640 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/56 (30%), Positives = 22/56 (39%) Frame = -2 Query: 363 QPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLGAQXI 196 QP+ A + + + APPP P A R R A PA P GA + Sbjct: 2 QPRGERPAGRTQSPEHSSPGPGPEAPPPPQPPAPEAERARPRQARPAAPMEGAMQL 57
>KLH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin)| Length = 640 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/56 (30%), Positives = 22/56 (39%) Frame = -2 Query: 363 QPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLGAQXI 196 QP+ A + + + APPP P A R R A PA P GA + Sbjct: 2 QPRGERPAGRTQSPEHSSPGPGPEAPPPPQPPAPEAERARPRQARPAAPMEGAMQL 57
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = -2 Query: 360 PKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKLGAQXIGRTSS 181 P+SSG+A +P AA + + +PP A A +++S G P + A R+ Sbjct: 402 PQSSGRAARPRAA----VAPRVRSPPRAAAAPVVSASADAAGPAPPAVPVDAHRAPRSRM 457 Query: 180 T 178 T Sbjct: 458 T 458
>EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1)| (Intersectin-EH-binding protein 1) (Ibp1) Length = 566 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/66 (24%), Positives = 26/66 (39%) Frame = -2 Query: 390 DLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAXPAQPKL 211 D WG AP ++G+ P + D ++ PP + P + G PA+P Sbjct: 323 DPWGGTPAP---AAGEGPTPDPWGSSDGGAPVSGPPSSDPWAPAPAFSDPWGGSPAKPSS 379 Query: 210 GAQXIG 193 +G Sbjct: 380 NGTAVG 385 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,336,213 Number of Sequences: 219361 Number of extensions: 1313379 Number of successful extensions: 3777 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3564 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3764 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)