ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24p06 |
|---|---|
| Clone Library Name | barley_pub |
>TIM14_CAEEL (P91454) Mitochondrial import inner membrane translocase subunit| TIM14 (DnaJ homolog subfamily C member 21) Length = 112 Score = 65.5 bits (158), Expect = 6e-11 Identities = 27/43 (62%), Positives = 36/43 (83%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 G+ + +P K+KEAHK+VM+ NHPD GGS YLA+KINEAKD++ Sbjct: 65 GVAPSAKPAKIKEAHKKVMIVNHPDRGGSPYLAAKINEAKDLM 107
>TIM14_CAEBR (Q617M0) Mitochondrial import inner membrane translocase subunit| TIM14 (DnaJ homolog subfamily C member 21) Length = 111 Score = 64.7 bits (156), Expect = 1e-10 Identities = 27/43 (62%), Positives = 36/43 (83%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 GI + +P K+K+AHK+VM+ NHPD GGS YLA+KINEAKD++ Sbjct: 64 GITPSAKPAKIKDAHKKVMIVNHPDRGGSPYLAAKINEAKDLM 106
>TIM14_BRARE (Q6PBT7) Mitochondrial import inner membrane translocase subunit| TIM14 (DnaJ homolog subfamily C member 19) Length = 115 Score = 61.6 bits (148), Expect = 9e-10 Identities = 26/48 (54%), Positives = 36/48 (75%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTK 311 G+ K++EAH+++M+ NHPD GGS YLA+KINEAKD+L G+ K Sbjct: 67 GVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLDGQAK 114
>TIM14_PONPY (Q5RF34) Mitochondrial import inner membrane translocase subunit| TIM14 (DnaJ homolog subfamily C member 19) Length = 115 Score = 61.2 bits (147), Expect = 1e-09 Identities = 25/48 (52%), Positives = 36/48 (75%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTK 311 G+ K+++AH+R+M+ NHPD GGS Y+A+KINEAKD+L G+ K Sbjct: 67 GVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 114
>TIM14_MOUSE (Q9CQV7) Mitochondrial import inner membrane translocase subunit| TIM14 (DnaJ homolog subfamily C member 19) Length = 115 Score = 61.2 bits (147), Expect = 1e-09 Identities = 25/48 (52%), Positives = 36/48 (75%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTK 311 G+ K+++AH+R+M+ NHPD GGS Y+A+KINEAKD+L G+ K Sbjct: 67 GVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 114
>TIM14_HUMAN (Q96DA6) Mitochondrial import inner membrane translocase subunit| TIM14 (DnaJ homolog subfamily C member 19) Length = 115 Score = 61.2 bits (147), Expect = 1e-09 Identities = 25/48 (52%), Positives = 36/48 (75%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTK 311 G+ K+++AH+R+M+ NHPD GGS Y+A+KINEAKD+L G+ K Sbjct: 67 GVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 114
>TIM14_BOVIN (Q3ZBN8) Mitochondrial import inner membrane translocase subunit| TIM14 (DnaJ homolog subfamily C member 19) Length = 115 Score = 60.8 bits (146), Expect = 2e-09 Identities = 25/48 (52%), Positives = 36/48 (75%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTK 311 G+ K+++AH+R+M+ NHPD GGS Y+A+KINEAKD+L G+ K Sbjct: 67 GVSPTANKAKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 114
>TIM14_KLULA (Q6CNW2) Mitochondrial import inner membrane translocase subunit| TIM14 (Presequence translocated-associated motor subunit PAM18) Length = 163 Score = 59.3 bits (142), Expect = 4e-09 Identities = 26/39 (66%), Positives = 32/39 (82%) Frame = -3 Query: 442 NVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 N+ K+KE H+R+M+ANHPD GGS YLA+KINEAKD L Sbjct: 118 NLSKKKLKEVHRRIMLANHPDKGGSPYLATKINEAKDFL 156
>TIM14_DEBHA (Q6BH37) Mitochondrial import inner membrane translocase subunit| TIM14 (Presequence translocated-associated motor subunit PAM18) Length = 172 Score = 58.5 bits (140), Expect = 8e-09 Identities = 26/46 (56%), Positives = 37/46 (80%) Frame = -3 Query: 442 NVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTKGG 305 N+ K+KE H+++M+ANHPD GGS YLA+K+NEAKD+L + +GG Sbjct: 125 NLSQAKLKEQHRKLMMANHPDKGGSSYLATKVNEAKDIL--EKRGG 168
>TIM14_DROME (Q9VTJ8) Mitochondrial import inner membrane translocase subunit| TIM14 Length = 118 Score = 58.2 bits (139), Expect = 1e-08 Identities = 25/43 (58%), Positives = 33/43 (76%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 G+ + K+K+AHK++M+ NHPD GGS YLA+KINEAKD L Sbjct: 72 GVSPSASKIKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFL 114
>TIM14_CANGA (Q6FPU1) Mitochondrial import inner membrane translocase subunit| TIM14 (Presequence translocated-associated motor subunit PAM18) Length = 153 Score = 58.2 bits (139), Expect = 1e-08 Identities = 25/39 (64%), Positives = 32/39 (82%) Frame = -3 Query: 442 NVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 N+ K+KE H+++M+ANHPD GGS YLA+KINEAKD L Sbjct: 107 NLTTKKLKEVHRKIMLANHPDKGGSPYLATKINEAKDFL 145
>TIM14_SCHPO (Q9UT37) Mitochondrial import inner membrane translocase subunit| tim14 (Presequence translocated-associated motor subunit pam18) Length = 140 Score = 57.4 bits (137), Expect = 2e-08 Identities = 24/34 (70%), Positives = 31/34 (91%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 K+KEAH+R+M+ANHPD GGS Y+ASK+NEAK +L Sbjct: 67 KIKEAHRRLMLANHPDRGGSPYVASKVNEAKSLL 100
>TIM14_CANAL (Q59SI2) Mitochondrial import inner membrane translocase subunit| TIM14 (Presequence translocated-associated motor subunit PAM18) Length = 157 Score = 55.5 bits (132), Expect = 6e-08 Identities = 24/39 (61%), Positives = 32/39 (82%) Frame = -3 Query: 442 NVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 N+ K+KE H+++M+ANHPD GGS Y+A+KINEAKD L Sbjct: 110 NLSKLKLKEQHRKLMMANHPDKGGSSYIATKINEAKDFL 148
>TIM14_ASHGO (Q759D2) Mitochondrial import inner membrane translocase subunit| TIM14 (Presequence translocated-associated motor subunit PAM18) Length = 158 Score = 55.5 bits (132), Expect = 6e-08 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 +VK+ H+++M+ANHPD GGS YLA+KINEAKD L Sbjct: 118 RVKDVHRKIMLANHPDKGGSPYLATKINEAKDFL 151
>TIM14_YEAST (Q07914) Mitochondrial import inner membrane translocase subunit| TIM14 (Presequence translocated-associated motor subunit PAM18) Length = 168 Score = 55.1 bits (131), Expect = 8e-08 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 K+KE H+++M+ANHPD GGS +LA+KINEAKD L Sbjct: 128 KLKEVHRKIMLANHPDKGGSPFLATKINEAKDFL 161
>TIM14_GIBZE (Q4I7T5) Mitochondrial import inner membrane translocase subunit| TIM14 (Presequence translocated-associated motor subunit PAM18) Length = 105 Score = 53.5 bits (127), Expect = 2e-07 Identities = 22/38 (57%), Positives = 31/38 (81%) Frame = -3 Query: 439 VRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 + DKV++AH+ +M+ NHPD GGS YLA+K+NEAK+ L Sbjct: 64 ITKDKVRKAHRTLMLLNHPDRGGSPYLATKVNEAKEFL 101
>TIM14_NEUCR (Q7RX75) Mitochondrial import inner membrane translocase subunit| tim-14 (Presequence translocated-associated motor subunit pam-18) Length = 105 Score = 53.1 bits (126), Expect = 3e-07 Identities = 21/38 (55%), Positives = 31/38 (81%) Frame = -3 Query: 439 VRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 + DK+++AH+ +M+ NHPD GGS YLA+K+NEAK+ L Sbjct: 64 ITKDKIRKAHRTLMLLNHPDRGGSPYLATKVNEAKEFL 101
>TIM14_EMENI (Q5B4H1) Mitochondrial import inner membrane translocase subunit| tim14 (Presequence translocated-associated motor subunit pam18) Length = 105 Score = 50.8 bits (120), Expect = 2e-06 Identities = 21/35 (60%), Positives = 30/35 (85%) Frame = -3 Query: 430 DKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 +KV++ H+++M+ NHPD GGS YLA+KINEAK+ L Sbjct: 67 EKVRKKHRQLMLLNHPDRGGSPYLATKINEAKEFL 101
>TIM14_ASPFU (Q4WI88) Mitochondrial import inner membrane translocase subunit| tim14 (Presequence translocated-associated motor subunit pam18) Length = 105 Score = 50.8 bits (120), Expect = 2e-06 Identities = 21/35 (60%), Positives = 30/35 (85%) Frame = -3 Query: 430 DKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 +KV++ H+++M+ NHPD GGS YLA+KINEAK+ L Sbjct: 67 EKVRKKHRQLMLLNHPDRGGSPYLATKINEAKEFL 101
>TIM14_YARLI (Q6CEU0) Mitochondrial import inner membrane translocase subunit| TIM14 (Presequence translocated-associated motor subunit PAM18) Length = 148 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/42 (54%), Positives = 33/42 (78%) Frame = -3 Query: 430 DKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTKGG 305 +K+K H+++M+ NHPD GGS Y+A+KINEAK VL + +GG Sbjct: 107 NKLKGQHRKIMLLNHPDRGGSPYVATKINEAKSVL--EKRGG 146
>MDJ2_YEAST (P42834) Mitochondrial DnaJ homolog 2| Length = 146 Score = 50.4 bits (119), Expect = 2e-06 Identities = 21/33 (63%), Positives = 28/33 (84%) Frame = -3 Query: 424 VKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 +K+ H++ MV NHPD GGS Y+A+KINEAK+VL Sbjct: 105 LKKKHRKAMVRNHPDRGGSPYMAAKINEAKEVL 137
>DNJH2_ALLPO (P42824) DnaJ protein homolog 2| Length = 418 Score = 38.9 bits (89), Expect = 0.006 Identities = 15/43 (34%), Positives = 27/43 (62%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 G+ +N P+ +K+A+++ + NHPD GG +I +A +VL Sbjct: 19 GVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVL 61
>DNJH1_ALLPO (Q03363) DnaJ protein homolog 1 (DNAJ-1) (Fragment)| Length = 397 Score = 37.4 bits (85), Expect = 0.018 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = -3 Query: 445 ENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 +N PD +K+A+++ + NHPD GG ++ +A DVL Sbjct: 1 KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVL 40
>DNAJ3_ARATH (Q94AW8) Chaperone protein dnaJ 3 (AtJ3) (AtDjA3)| Length = 420 Score = 36.2 bits (82), Expect = 0.040 Identities = 14/43 (32%), Positives = 27/43 (62%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 G+ ++ P+ +K+A+K+ + NHPD GG ++ +A +VL Sbjct: 20 GVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVL 62
>DNJH_CUCSA (Q04960) DnaJ protein homolog (DNAJ-1)| Length = 413 Score = 35.8 bits (81), Expect = 0.053 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 G+ +N D +K+A+++ + NHPD GG ++ +A +VL Sbjct: 18 GVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVL 60
>DNAJ2_ARATH (P42825) Chaperone protein dnaJ 2 (AtDjA2)| Length = 419 Score = 35.8 bits (81), Expect = 0.053 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 G+ + P+ +K+A+K+ + NHPD GG ++ +A +VL Sbjct: 20 GVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVL 62
>DNJH_ATRNU (P43644) DnaJ protein homolog ANJ1| Length = 417 Score = 35.4 bits (80), Expect = 0.069 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 G+ ++ P+ +K+A+K+ + NHPD GG ++ A +VL Sbjct: 19 GVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVL 61
>TIM16_NEUCR (Q7S6S4) Mitochondrial import inner membrane translocase subunit| tim-16 (Presequence translocated-associated motor subunit pam-16) Length = 141 Score = 35.0 bits (79), Expect = 0.090 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = -3 Query: 430 DKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTK 311 ++V E KR+ AN P+ GGS YL SK+ A++ L + K Sbjct: 78 EEVMERFKRLFDANDPEKGGSFYLQSKVVRARERLEAEIK 117
>TIM16_GIBZE (Q4I375) Mitochondrial import inner membrane translocase subunit| TIM16 (Presequence translocated-associated motor subunit PAM16) Length = 138 Score = 33.5 bits (75), Expect = 0.26 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 430 DKVKEAHKRVMVANHPDAGGSHYLASKINEAKD 332 ++V +KR+ AN P GGS YL SKI AK+ Sbjct: 76 EEVLSRYKRLFDANDPQKGGSFYLQSKIVRAKE 108
>DNAJ_MYCMS (Q6MT07) Chaperone protein dnaJ| Length = 372 Score = 32.7 bits (73), Expect = 0.45 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGS---HYLASKINEAKDVLLGKTK 311 G+ + ++++A++++ HPD S H +INEA DVLL K K Sbjct: 11 GVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDK 61
>HAP5_YEAST (Q02516) Transcriptional activator HAP5| Length = 242 Score = 32.7 bits (73), Expect = 0.45 Identities = 20/64 (31%), Positives = 36/64 (56%) Frame = -1 Query: 324 WGKLKEVVRPFDDISCKMCSSNEDAIIFAPPDSAPRTRSRQKPWCITEISGQRTLDVLDV 145 + ++++V++ +D+ KM S+ E IIFA T + WC+ E + +RTL D+ Sbjct: 162 FARIRKVMKTDEDV--KMISA-EAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADI 218 Query: 144 AGSL 133 A +L Sbjct: 219 AEAL 222
>DNAJ_MANSM (Q65U54) Chaperone protein dnaJ| Length = 376 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLA----SKINEAKDVLLGKTK 311 G+++ ++K A+KR+ + HPD A ++NEA ++L+ K K Sbjct: 11 GVQKGADEKEIKRAYKRLAMKYHPDRTNGDKAAEEKFKEVNEAYEILMDKEK 62
>DNAJ_LEIXX (Q6AEC0) Chaperone protein dnaJ| Length = 369 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASK---INEAKDVLLGK------TKGGG 302 G+ N PD++K+A++R+ HPD S + + A DVL +GG Sbjct: 9 GVERNATPDEIKKAYRRLARELHPDVNPSTEAQERFKLVTHAYDVLSDPQQRQQYDRGGA 68 Query: 301 SAF 293 S F Sbjct: 69 SGF 71
>DNAJ2_PROAC (Q6A662) Chaperone protein dnaJ 2| Length = 380 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLA----SKINEAKDVLLGKTK 311 G+ ++ +P+++K+A +++ NHPD+ A + +EA DVL K Sbjct: 16 GVSKDAKPEEIKKAFRKIARDNHPDSHPGDKAAEARFKEASEANDVLSNAKK 67
>DNAJ_WIGBR (Q8D2Q6) Chaperone protein dnaJ| Length = 374 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLA----SKINEAKDVLLGKTK 311 GI +N ++K A+KR+ V HPD + A +I EA +VLL K Sbjct: 11 GISKNASDREIKTAYKRLAVKFHPDRNPGNLEAESKFKEIKEAYEVLLDPKK 62
>DNAJ_HAEIN (P43735) Chaperone protein dnaJ| Length = 382 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAG-GSHYLASK---INEAKDVL 326 G+++ D++K A+KR+ +HPD GS K INEA +VL Sbjct: 11 GLQKGASEDEIKRAYKRLASKHHPDKNQGSKEAEEKFKEINEAYEVL 57
>TIM16_EMENI (Q5B187) Mitochondrial import inner membrane translocase subunit| tim16 (Presequence translocated-associated motor subunit pam16) Length = 135 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 430 DKVKEAHKRVMVANHPDAGGSHYLASKINEAKD 332 ++V E K++ N P GGS YL SKI A++ Sbjct: 72 EQVMERFKKLFDLNDPQKGGSFYLQSKILRARE 104
>TIM16_XENTR (Q5XGJ0) Mitochondrial import inner membrane translocase subunit| TIM16 Length = 125 Score = 30.4 bits (67), Expect = 2.2 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = -3 Query: 433 PDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 P+++++ ++ + N + GGS YL SK+ AK+ L Sbjct: 70 PEEIQKNYEHLFKVNDKEVGGSFYLQSKVVRAKERL 105
>TAMI_POVMC (P12906) Middle T antigen| Length = 421 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKIN 344 ++++A+K+ + HPD GGSH L ++N Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>TAMI_POVMA (P03077) Middle T antigen| Length = 421 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKIN 344 ++++A+K+ + HPD GGSH L ++N Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>TAMI_POVM3 (P03076) Middle T antigen| Length = 440 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKIN 344 ++++A+K+ + HPD GGSH L ++N Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>TALA_POVMA (P03073) Large T antigen| Length = 785 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKIN 344 ++++A+K+ + HPD GGSH L ++N Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>TIM16_KLULA (Q6CK35) Mitochondrial import inner membrane translocase subunit| TIM16 (Presequence translocated-associated motor subunit PAM16) Length = 139 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 445 ENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 +++ DK+ E K + N + GGS YL SKI A + L Sbjct: 67 QDMNLDKINERFKYLFEINDKEKGGSFYLQSKIYRAAERL 106
>DJLA_VIBF1 (Q5E861) DnaJ-like protein djlA| Length = 283 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPD 380 GI E+ P +K AH+++M +HPD Sbjct: 223 GISEDADPKTIKRAHRKLMNEHHPD 247
>DNAJ2_COREF (Q8FM80) Chaperone protein dnaJ 2| Length = 395 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLA----SKINEAKDVLLGKTK 311 G+ +N + +K+A++++ NHPD +A K EA DV+ +TK Sbjct: 16 GVSKNASAEDIKKAYRKLARENHPDKNPGDKVAEDRFKKAAEAYDVVGDETK 67
>TIM16_MOUSE (Q9CQV1) Mitochondrial import inner membrane translocase subunit| TIM16 (Mitochondria-associated granulocyte macrophage CSF signaling molecule) Length = 125 Score = 30.0 bits (66), Expect = 2.9 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -3 Query: 433 PDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 P++V++ ++ + N GGS YL SK+ AK+ L Sbjct: 70 PEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERL 105
>TIM16_HUMAN (Q9Y3D7) Mitochondrial import inner membrane translocase subunit| TIM16 (Mitochondria-associated granulocyte macrophage CSF signaling molecule) Length = 125 Score = 30.0 bits (66), Expect = 2.9 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -3 Query: 433 PDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 P++V++ ++ + N GGS YL SK+ AK+ L Sbjct: 70 PEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERL 105
>NFYC_HUMAN (Q13952) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) (Transactivator HSM-1/2) Length = 458 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/85 (27%), Positives = 42/85 (49%) Frame = -1 Query: 384 RTQEEAITLRRRSMRQKMFCWGKLKEVVRPFDDISCKMCSSNEDAIIFAPPDSAPRTRSR 205 R EE L + R + ++K++++ +D+ KM S+ E ++FA T Sbjct: 25 RVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDV--KMISA-EAPVLFAKAAQIFITELT 81 Query: 204 QKPWCITEISGQRTLDVLDVAGSLT 130 + W TE + +RTL D+A ++T Sbjct: 82 LRAWIHTEDNKRRTLQRNDIAMAIT 106
>TASM_POVMA (P68835) Small T antigen| Length = 195 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKIN 344 ++++A+K+ + HPD GGSH L ++N Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>TASM_POVM3 (P68834) Small T antigen| Length = 195 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKIN 344 ++++A+K+ + HPD GGSH L ++N Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>TALA_POVMC (P12905) Large T antigen| Length = 777 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKIN 344 ++++A+K+ + HPD GGSH L ++N Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>NFYC_RAT (Q62725) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) (CCAAT-binding transcription factor subunit C) (CBF-C) Length = 335 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/85 (27%), Positives = 42/85 (49%) Frame = -1 Query: 384 RTQEEAITLRRRSMRQKMFCWGKLKEVVRPFDDISCKMCSSNEDAIIFAPPDSAPRTRSR 205 R EE L + R + ++K++++ +D+ KM S+ E ++FA T Sbjct: 25 RVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDV--KMISA-EAPVLFAKAAQIFITELT 81 Query: 204 QKPWCITEISGQRTLDVLDVAGSLT 130 + W TE + +RTL D+A ++T Sbjct: 82 LRAWIHTEDNKRRTLQRNDIAMAIT 106
>NFYC_PONPY (Q5RA23) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) Length = 335 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/85 (27%), Positives = 42/85 (49%) Frame = -1 Query: 384 RTQEEAITLRRRSMRQKMFCWGKLKEVVRPFDDISCKMCSSNEDAIIFAPPDSAPRTRSR 205 R EE L + R + ++K++++ +D+ KM S+ E ++FA T Sbjct: 25 RVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDV--KMISA-EAPVLFAKAAQIFITELT 81 Query: 204 QKPWCITEISGQRTLDVLDVAGSLT 130 + W TE + +RTL D+A ++T Sbjct: 82 LRAWIHTEDNKRRTLQRNDIAMAIT 106
>NFYC_MOUSE (P70353) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) Length = 335 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/85 (27%), Positives = 42/85 (49%) Frame = -1 Query: 384 RTQEEAITLRRRSMRQKMFCWGKLKEVVRPFDDISCKMCSSNEDAIIFAPPDSAPRTRSR 205 R EE L + R + ++K++++ +D+ KM S+ E ++FA T Sbjct: 25 RVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDV--KMISA-EAPVLFAKAAQIFITELT 81 Query: 204 QKPWCITEISGQRTLDVLDVAGSLT 130 + W TE + +RTL D+A ++T Sbjct: 82 LRAWIHTEDNKRRTLQRNDIAMAIT 106
>NFYC_BOVIN (Q5E9X1) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) Length = 335 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/85 (27%), Positives = 42/85 (49%) Frame = -1 Query: 384 RTQEEAITLRRRSMRQKMFCWGKLKEVVRPFDDISCKMCSSNEDAIIFAPPDSAPRTRSR 205 R EE L + R + ++K++++ +D+ KM S+ E ++FA T Sbjct: 25 RVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDV--KMISA-EAPVLFAKAAQIFITELT 81 Query: 204 QKPWCITEISGQRTLDVLDVAGSLT 130 + W TE + +RTL D+A ++T Sbjct: 82 LRAWIHTEDNKRRTLQRNDIAMAIT 106
>TALA_POVM3 (P03074) Large T antigen| Length = 782 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 427 KVKEAHKRVMVANHPDAGGSHYLASKIN 344 ++++A+K+ + HPD GGSH L ++N Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>DNAJ1_STRCO (P40170) Chaperone protein dnaJ 1| Length = 399 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 4/47 (8%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLA----SKINEAKDVL 326 G+ ++ ++K+A++++ NHPDA + A +I+EA D+L Sbjct: 16 GVPKDATEAEIKKAYRKLARENHPDANKGNVKAEERFKEISEANDIL 62
>TIM16_CANAL (Q59ZW9) Mitochondrial import inner membrane translocase subunit| TIM16 (Presequence translocated-associated motor subunit PAM16) Length = 121 Score = 29.3 bits (64), Expect = 4.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 430 DKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 DKV+E ++ + N + G S YL SK+ A D L Sbjct: 68 DKVEEKYEYLFNVNSKEQGNSFYLQSKVYYAMDTL 102
>THIC_BRAJA (Q89FP0) Thiamine biosynthesis protein thiC| Length = 632 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 246 IFAPPDSAPRTRSRQKPWCITEISGQRTLDVLDVAGSLT 130 IFA PD+AP R + ++E +G+ L V D +G T Sbjct: 25 IFASPDAAPDLRVPLREIILSEGAGEPNLPVYDTSGPYT 63
>RPOB_MANSM (Q65W41) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Frame = +2 Query: 284 ISSKGRTTSFSF-PQQNIFCLIDLRRKVMASSCVRVIG-NHDPLVCLFY 424 I +G F F P+ N+F ID RRK+ A+ +R +G + + ++ LF+ Sbjct: 177 IPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYSTEEILDLFF 225
>RPOB_HAEIN (P43738) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1343 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +2 Query: 284 ISSKGRTTSFSF-PQQNIFCLIDLRRKVMASSCVRVIG 394 I +G F F P+ N+F ID RRK+ A+ +R +G Sbjct: 177 IPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALG 214
>RPOB_HAEI8 (Q4QN33) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1343 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +2 Query: 284 ISSKGRTTSFSF-PQQNIFCLIDLRRKVMASSCVRVIG 394 I +G F F P+ N+F ID RRK+ A+ +R +G Sbjct: 177 IPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALG 214
>TIM16_SCHPO (Q9C1W5) Mitochondrial import inner membrane translocase subunit| tim16 (Presequence translocated-associated motor subunit pam16) Length = 128 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%) Frame = -3 Query: 442 NVRPDKVKEAH-----KRVMVANHPDAGGSHYLASKINEAKDVL 326 N++P+ ++E +++ N P GGS YL SK+ A + L Sbjct: 65 NIKPESLEEGELEKRFQKMFEINDPKKGGSFYLQSKVFRAHEKL 108
>TI16B_XENLA (Q5M995) Mitochondrial import inner membrane translocase subunit| TIM16-B Length = 122 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 433 PDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 P+++++ ++ + N GGS YL SK+ AK+ L Sbjct: 70 PEEIQKNYEHLFKVNDKAVGGSFYLQSKVVRAKERL 105
>YCF2_PSINU (Q8WHW9) Protein ycf2| Length = 2313 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -1 Query: 408 RGSWLPITRTQEEAITLRRRSMRQKMFCWGKLKEVVRPFDDISCKMCSSNE 256 R SW + R QE +TL R S +G L+ ++ F + ++C N+ Sbjct: 1907 RDSWFILERKQESLVTLDRISENDIQLAFGILESLLADFSGL--EICGKND 1955
>TI16A_XENLA (Q6NTU3) Mitochondrial import inner membrane translocase subunit| TIM16-A Length = 125 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 433 PDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVL 326 P+++++ ++ + N GGS YL SK+ AK+ L Sbjct: 70 PEEIQKNYEHLFKVNDKGLGGSFYLQSKVVRAKERL 105
>DNAJ2_THET8 (Q56237) Chaperone protein dnaJ 2| Length = 280 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -3 Query: 454 GIRENVRPDKVKEAHKRVMVANHPDAGGSHYLASK---INEAKDVL 326 G+ N +++K A+KR+ HPD S K INEA VL Sbjct: 12 GVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVL 57
>URP2_MOUSE (Q8K1B8) Unc-112-related protein 2 (Kindlin-3)| Length = 665 Score = 28.9 bits (63), Expect = 6.4 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%) Frame = +2 Query: 173 PEISVIHQGFCLLLVLGAESGGAKIIASSLDEHILHD------ISSKGRT---TSFSFPQ 325 P+++V Q FC+ L++ + G ++I DE ++SKGRT +S++ Sbjct: 407 PDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYAQWMAACRLASKGRTMADSSYASEV 466 Query: 326 QNIFCLIDLRR 358 Q I + L+R Sbjct: 467 QAILAFLSLQR 477
>RPOB_COLP3 (Q47UV9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = +2 Query: 284 ISSKGRTTSFSF-PQQNIFCLIDLRRKVMASSCVRVIG-NHDPLVCLFY 424 I +G F F P+ N+F ID RRK+ AS +R + + + ++ +FY Sbjct: 177 IPYRGSWLDFEFDPKDNLFVRIDRRRKLPASIILRALEYSTEEILAMFY 225
>EID1_ARATH (Q8LEA8) Phytochrome A-associated F-box protein (Empfindlicher im| dunkelroten Licht protein 1) Length = 336 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Frame = +2 Query: 125 QTVKEPATSKTSNV-----LCPEISVIHQGFCLLLVLGAESGGAKIIASSLDEH 271 +T+ + SKTS + LC E +H FCL V G G ++ + + E+ Sbjct: 269 RTINDGNRSKTSGLKCAFCLCDETWDLHSSFCLRRVFGFHDDGEPVVRAYVCEN 322
>ZAP1_YEAST (P47043) Zinc-responsive transcriptional regulator ZAP1| Length = 880 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -1 Query: 342 RQKMFCWGKLKEVVRPFDDISCKMCSSNEDAIIFAPPDSAPRTRSRQKPW 193 RQK+ K+ +P+ +CK C S+E+ ++ RT S +KP+ Sbjct: 752 RQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLV-----QHTRTHSGEKPY 796
>UVRC_COXBU (Q83CD5) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 609 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -1 Query: 354 RRSMRQKMFCWGKLKEVVRPFDDISCKMCSS-NEDAIIFAPPDSAPRTRSRQKPWCITEI 178 R++ +K+F WG+ +E+ P D+I+ + ++A FA R R+ + EI Sbjct: 498 RKAGLEKLFVWGRREEIHLPADNIAFHLIQQIRDEAHRFAITAHCNRRAKRRVESTLQEI 557 Query: 177 SG 172 G Sbjct: 558 EG 559
>RPOB_ERWCT (Q6DAN0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +2 Query: 284 ISSKGRTTSFSF-PQQNIFCLIDLRRKVMASSCVRVIG 394 I +G F F P+ N+F ID RRK+ A+ +R +G Sbjct: 177 IPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALG 214 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,224,535 Number of Sequences: 219361 Number of extensions: 1312873 Number of successful extensions: 3263 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 3189 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3263 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
