ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24p06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550205.1| Oryza sativa (japonica cultivar-group), mRNA 157 4e-35
2dbj|AK121694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 4e-35
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
4dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
5dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
6dbj|AK103333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 129 9e-27
8dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic D... 129 9e-27
9gb|AY107875.1| Zea mays PCO097076 mRNA sequence 78 3e-11
10ref|NM_111804.2| Arabidopsis thaliana heat shock protein binding... 72 2e-09
11gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11... 72 2e-09
12emb|BX825697.1|CNS0A6GF Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
13emb|BX825447.1|CNS0A66I Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
14emb|BX825306.1|CNS0A699 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
15gb|BT004706.1| Arabidopsis thaliana At3g09700 gene, complete cds 72 2e-09
16gb|AY088289.1| Arabidopsis thaliana clone 5219 mRNA, complete se... 72 2e-09
17dbj|AK117795.1| Arabidopsis thaliana At3g09700 mRNA for unknown ... 72 2e-09
18ref|NM_184916.1| Oryza sativa (japonica cultivar-group), mRNA 70 7e-09
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 70 7e-09
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
21gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genom... 70 7e-09
22dbj|AK107941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
23ref|NM_120381.1| Arabidopsis thaliana heat shock protein binding... 50 0.006
24gb|BT025587.1| Arabidopsis thaliana At5g03030 mRNA, complete cds 50 0.006
25emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, B... 50 0.006
26emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BA... 50 0.006
27gb|AY085893.1| Arabidopsis thaliana clone 19432 mRNA, complete s... 50 0.006
28ref|NM_032456.1| Homo sapiens BH-protocadherin (brain-heart) (PC... 44 0.39
29gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 44 0.39
30gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, comple... 44 0.39
31gb|AC009220.10|AC009220 Homo sapiens chromosome 7 clone RP11-365... 44 0.39
32dbj|AB006756.1| Homo sapiens mRNA for PCDH7 (BH-Pcdh)b, complete... 44 0.39
33gb|AC115090.8| Homo sapiens chromosome 17, clone CTC-861O14, com... 42 1.6
34emb|BX833736.1|CNS0A203 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
35gb|AC107835.8| Mus musculus chromosome 8, clone RP23-267M21, com... 42 1.6
36dbj|AP006406.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.6
37emb|AL929037.3| Mouse DNA sequence from clone RP23-297K24 on chr... 42 1.6
38gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, co... 40 6.1
39gb|AC134426.20| Mus musculus chromosome 1, clone RP24-342A12, co... 40 6.1
40emb|AL139258.13| Human DNA sequence from clone RP5-817C23 on chr... 40 6.1
41gb|AC156268.10| Mus musculus 10 BAC RP24-336P23 (Roswell Park Ca... 40 6.1
42gb|AC162880.4| Mus musculus chromosome 1, clone RP24-275N11, com... 40 6.1
43gb|AC024106.14| Homo sapiens 3 BAC RP11-33K7 (Roswell Park Cance... 40 6.1
44emb|BX547935.12| Zebrafish DNA sequence from clone CH211-207C1 i... 40 6.1
45gb|AC128690.5| Homo sapiens 3 BAC RP11-399P20 (Roswell Park Canc... 40 6.1
46gb|AC153929.3| Mus musculus 10 BAC RP24-364H18 (Roswell Park Can... 40 6.1
47gb|AC099696.12| Mus musculus chromosome 1, clone RP23-453N3, com... 40 6.1
48gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 40 6.1
49gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.1 
>ref|XM_550205.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 711

 Score =  157 bits (79), Expect = 4e-35
 Identities = 145/167 (86%)
 Strand = Plus / Minus

                                                                       
Query: 290 tcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattgat 349
           ||||||| | || ||||||||||| ||||| || |||||||||||||| |||||||| ||
Sbjct: 489 tcaaaagactgatccacctccttttgttttacctagcaaaacatctttggcctcattaat 430

                                                                       
Query: 350 cttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctctt 409
           |||||| ||||||||||| || || ||||| ||||| |||||||||||||||||| | ||
Sbjct: 429 cttcgaagcaaggtaatgactgccccctgcatccggatgattggcaaccatgaccttttt 370

                                                          
Query: 410 gtgtgcctcttttaccttatcaggacggacgttttccctgataccca 456
           |||||||||||| ||||| |||||| |||| ||||| |||| |||||
Sbjct: 369 gtgtgcctctttaaccttctcaggatggacattttctctgacaccca 323
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>dbj|AK121694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072F06, full
           insert sequence
          Length = 711

 Score =  157 bits (79), Expect = 4e-35
 Identities = 145/167 (86%)
 Strand = Plus / Minus

                                                                       
Query: 290 tcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattgat 349
           ||||||| | || ||||||||||| ||||| || |||||||||||||| |||||||| ||
Sbjct: 488 tcaaaagactgatccacctccttttgttttacctagcaaaacatctttggcctcattaat 429

                                                                       
Query: 350 cttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctctt 409
           |||||| ||||||||||| || || ||||| ||||| |||||||||||||||||| | ||
Sbjct: 428 cttcgaagcaaggtaatgactgccccctgcatccggatgattggcaaccatgaccttttt 369

                                                          
Query: 410 gtgtgcctcttttaccttatcaggacggacgttttccctgataccca 456
           |||||||||||| ||||| |||||| |||| ||||| |||| |||||
Sbjct: 368 gtgtgcctctttaaccttctcaggatggacattttctctgacaccca 322
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  151 bits (76), Expect = 2e-33
 Identities = 136/156 (87%)
 Strand = Plus / Plus

                                                                           
Query: 290     tcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattgat 349
               ||||||| | || ||||||||||| ||||| || |||||||||||||| |||||||| ||
Sbjct: 3040702 tcaaaagactgatccacctccttttgttttacctagcaaaacatctttggcctcattaat 3040761

                                                                           
Query: 350     cttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctctt 409
               |||||| ||||||||||| || || ||||| ||||| |||||||||||||||||| | ||
Sbjct: 3040762 cttcgaagcaaggtaatgactgccccctgcatccggatgattggcaaccatgaccttttt 3040821

                                                   
Query: 410     gtgtgcctcttttaccttatcaggacggacgttttc 445
               |||||||||||| ||||| |||||| |||| |||||
Sbjct: 3040822 gtgtgcctctttaaccttctcaggatggacattttc 3040857
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>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0011G08
          Length = 139490

 Score =  151 bits (76), Expect = 2e-33
 Identities = 136/156 (87%)
 Strand = Plus / Plus

                                                                          
Query: 290    tcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattgat 349
              ||||||| | || ||||||||||| ||||| || |||||||||||||| |||||||| ||
Sbjct: 122219 tcaaaagactgatccacctccttttgttttacctagcaaaacatctttggcctcattaat 122278

                                                                          
Query: 350    cttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctctt 409
              |||||| ||||||||||| || || ||||| ||||| |||||||||||||||||| | ||
Sbjct: 122279 cttcgaagcaaggtaatgactgccccctgcatccggatgattggcaaccatgaccttttt 122338

                                                  
Query: 410    gtgtgcctcttttaccttatcaggacggacgttttc 445
              |||||||||||| ||||| |||||| |||| |||||
Sbjct: 122339 gtgtgcctctttaaccttctcaggatggacattttc 122374
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>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0433F09
          Length = 150150

 Score =  151 bits (76), Expect = 2e-33
 Identities = 136/156 (87%)
 Strand = Plus / Plus

                                                                        
Query: 290  tcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattgat 349
            ||||||| | || ||||||||||| ||||| || |||||||||||||| |||||||| ||
Sbjct: 8742 tcaaaagactgatccacctccttttgttttacctagcaaaacatctttggcctcattaat 8801

                                                                        
Query: 350  cttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctctt 409
            |||||| ||||||||||| || || ||||| ||||| |||||||||||||||||| | ||
Sbjct: 8802 cttcgaagcaaggtaatgactgccccctgcatccggatgattggcaaccatgaccttttt 8861

                                                
Query: 410  gtgtgcctcttttaccttatcaggacggacgttttc 445
            |||||||||||| ||||| |||||| |||| |||||
Sbjct: 8862 gtgtgcctctttaaccttctcaggatggacattttc 8897
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>dbj|AK103333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125O08, full
            insert sequence
          Length = 1620

 Score =  131 bits (66), Expect = 2e-27
 Identities = 138/162 (85%)
 Strand = Plus / Minus

                                                                        
Query: 289  atcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattga 348
            |||||||||| || || |||||||| || ||||| | ||||| |||||| ||||||||||
Sbjct: 1380 atcaaaaggctgacccccctccttttgtcttccctaacaaaatatctttggcctcattga 1321

                                                                        
Query: 349  tcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctct 408
            |||| || |||||||||||||| || ||||| || || || || |||||||||||| |||
Sbjct: 1320 tctttgaagcaaggtaatggctaccgcctgcatctggatggttagcaaccatgaccttct 1261

                                                      
Query: 409  tgtgtgcctcttttaccttatcaggacggacgttttccctga 450
            | || |||||||||||||| |||||| || ||||||||||||
Sbjct: 1260 tatgcgcctcttttaccttctcaggatgggcgttttccctga 1219
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  129 bits (65), Expect = 9e-27
 Identities = 137/161 (85%)
 Strand = Plus / Plus

                                                                           
Query: 289     atcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattga 348
               |||||||||| || || |||||||| || ||||| | ||||| |||||| ||||||||||
Sbjct: 5010399 atcaaaaggctgacccccctccttttgtcttccctaacaaaatatctttggcctcattga 5010458

                                                                           
Query: 349     tcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctct 408
               |||| || |||||||||||||| || ||||| || || || || |||||||||||| |||
Sbjct: 5010459 tctttgaagcaaggtaatggctaccgcctgcatctggatggttagcaaccatgaccttct 5010518

                                                        
Query: 409     tgtgtgcctcttttaccttatcaggacggacgttttccctg 449
               | || |||||||||||||| |||||| || |||||||||||
Sbjct: 5010519 tatgcgcctcttttaccttctcaggatgggcgttttccctg 5010559
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>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score =  129 bits (65), Expect = 9e-27
 Identities = 137/161 (85%)
 Strand = Plus / Plus

                                                                         
Query: 289   atcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattga 348
             |||||||||| || || |||||||| || ||||| | ||||| |||||| ||||||||||
Sbjct: 52088 atcaaaaggctgacccccctccttttgtcttccctaacaaaatatctttggcctcattga 52147

                                                                         
Query: 349   tcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctct 408
             |||| || |||||||||||||| || ||||| || || || || |||||||||||| |||
Sbjct: 52148 tctttgaagcaaggtaatggctaccgcctgcatctggatggttagcaaccatgaccttct 52207

                                                      
Query: 409   tgtgtgcctcttttaccttatcaggacggacgttttccctg 449
             | || |||||||||||||| |||||| || |||||||||||
Sbjct: 52208 tatgcgcctcttttaccttctcaggatgggcgttttccctg 52248
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>gb|AY107875.1| Zea mays PCO097076 mRNA sequence
          Length = 767

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 114/139 (82%)
 Strand = Plus / Minus

                                                                       
Query: 289 atcaaaaggccgaaccacctcctttagttttccccagcaaaacatcttttgcctcattga 348
           |||||||||| || ||||| ||||| ||||||||   ||  ||||| |||||||| || |
Sbjct: 578 atcaaaaggcagacccacccccttttgttttccctgtcattacatcctttgcctcgttaa 519

                                                                       
Query: 349 tcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggcaaccatgaccctct 408
           |||| || ||||||||||| ||||| || || || || |||||||| ||||| || ||||
Sbjct: 518 tctttgaagcaaggtaatgacttccacccgcatctggatgattggccaccatcactctct 459

                              
Query: 409 tgtgtgcctcttttacctt 427
           ||||||| ||||| |||||
Sbjct: 458 tgtgtgcttctttgacctt 440
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>ref|NM_111804.2| Arabidopsis thaliana heat shock protein binding / unfolded protein
           binding AT3G09700 mRNA, complete cds
          Length = 690

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 tcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattg 392
           ||||| || ||||||||||| |||||||||||||||||||||||||| || || ||||| 
Sbjct: 434 tctttggcttcattgatcttagacgcaaggtaatggcttcctcctgcatctggatgatta 375

                   
Query: 393 gcaaccat 400
           || |||||
Sbjct: 374 gccaccat 367
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>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete
             sequence
          Length = 107603

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                         
Query: 333   tcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattg 392
             ||||| || ||||||||||| |||||||||||||||||||||||||| || || ||||| 
Sbjct: 73510 tctttggcttcattgatcttagacgcaaggtaatggcttcctcctgcatctggatgatta 73569

                     
Query: 393   gcaaccat 400
             || |||||
Sbjct: 73570 gccaccat 73577
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>emb|BX825697.1|CNS0A6GF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL57ZB03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 727

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 tcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattg 392
           ||||| || ||||||||||| |||||||||||||||||||||||||| || || ||||| 
Sbjct: 392 tctttggcttcattgatcttagacgcaaggtaatggcttcctcctgcatctggatgatta 333

                   
Query: 393 gcaaccat 400
           || |||||
Sbjct: 332 gccaccat 325
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>emb|BX825447.1|CNS0A66I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL37ZH06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 685

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 tcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattg 392
           ||||| || ||||||||||| |||||||||||||||||||||||||| || || ||||| 
Sbjct: 419 tctttggcttcattgatcttagacgcaaggtaatggcttcctcctgcatctggatgatta 360

                   
Query: 393 gcaaccat 400
           || |||||
Sbjct: 359 gccaccat 352
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>emb|BX825306.1|CNS0A699 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL28ZA05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 692

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 tcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattg 392
           ||||| || ||||||||||| |||||||||||||||||||||||||| || || ||||| 
Sbjct: 387 tctttggcttcattgatcttagacgcaaggtaatggcttcctcctgcatctggatgatta 328

                   
Query: 393 gcaaccat 400
           || |||||
Sbjct: 327 gccaccat 320
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>gb|BT004706.1| Arabidopsis thaliana At3g09700 gene, complete cds
          Length = 339

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 tcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattg 392
           ||||| || ||||||||||| |||||||||||||||||||||||||| || || ||||| 
Sbjct: 296 tctttggcttcattgatcttagacgcaaggtaatggcttcctcctgcatctggatgatta 237

                   
Query: 393 gcaaccat 400
           || |||||
Sbjct: 236 gccaccat 229
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>gb|AY088289.1| Arabidopsis thaliana clone 5219 mRNA, complete sequence
          Length = 555

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 tcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattg 392
           ||||| || ||||||||||| |||||||||||||||||||||||||| || || ||||| 
Sbjct: 354 tctttggcttcattgatcttagacgcaaggtaatggcttcctcctgcatctggatgatta 295

                   
Query: 393 gcaaccat 400
           || |||||
Sbjct: 294 gccaccat 287
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>dbj|AK117795.1| Arabidopsis thaliana At3g09700 mRNA for unknown protein, complete
           cds, clone: RAFL17-48-I20
          Length = 691

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 tcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattg 392
           ||||| || ||||||||||| |||||||||||||||||||||||||| || || ||||| 
Sbjct: 434 tctttggcttcattgatcttagacgcaaggtaatggcttcctcctgcatctggatgatta 375

                   
Query: 393 gcaaccat 400
           || |||||
Sbjct: 374 gccaccat 367
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>ref|NM_184916.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 291

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 336 tttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggca 395
           ||||||||||| |||||||| || | ||||||||| || || || || ||||||||||| 
Sbjct: 248 tttgcctcatttatcttcgaagcgatgtaatggctcccaccagcatcagggtgattggct 189

                                  
Query: 396 accatgaccctcttgtgtgcctc 418
           ||||| ||||||||||| |||||
Sbjct: 188 accattaccctcttgtgagcctc 166
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                            
Query: 336      tttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggca 395
                ||||||||||| |||||||| || | ||||||||| || || || || ||||||||||| 
Sbjct: 31906708 tttgcctcatttatcttcgaagcgatgtaatggctcccaccagcatcagggtgattggct 31906649

                                       
Query: 396      accatgaccctcttgtgtgcctc 418
                ||||| ||||||||||| |||||
Sbjct: 31906648 accattaccctcttgtgagcctc 31906626
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                            
Query: 336      tttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggca 395
                ||||||||||| |||||||| || | ||||||||| || || || || ||||||||||| 
Sbjct: 31997224 tttgcctcatttatcttcgaagcgatgtaatggctcccaccagcatcagggtgattggct 31997165

                                       
Query: 396      accatgaccctcttgtgtgcctc 418
                ||||| ||||||||||| |||||
Sbjct: 31997164 accattaccctcttgtgagcctc 31997142
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>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete
              sequence
          Length = 150663

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                          
Query: 336    tttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggca 395
              ||||||||||| |||||||| || | ||||||||| || || || || ||||||||||| 
Sbjct: 107961 tttgcctcatttatcttcgaagcgatgtaatggctcccaccagcatcagggtgattggct 107902

                                     
Query: 396    accatgaccctcttgtgtgcctc 418
              ||||| ||||||||||| |||||
Sbjct: 107901 accattaccctcttgtgagcctc 107879
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>dbj|AK107941.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-B01, full
           insert sequence
          Length = 689

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 336 tttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgattggca 395
           ||||||||||| |||||||| || | ||| ||||| || || || || ||||||||||| 
Sbjct: 490 tttgcctcatttatcttcgaagcgatgtattggctcccaccagcatcagggtgattggct 431

                                  
Query: 396 accatgaccctcttgtgtgcctc 418
           ||||| ||||||||||| |||||
Sbjct: 430 accattaccctcttgtgagcctc 408
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>ref|NM_120381.1| Arabidopsis thaliana heat shock protein binding / unfolded protein
           binding AT5G03030 mRNA, complete cds
          Length = 665

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 332 atcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgatt 391
           |||||| || ||||||||||| || ||||| || || || ||||| ||||| ||||||||
Sbjct: 487 atctttggcttcattgatcttagaagcaagatagtgactgcctccagcgtctgggtgatt 428

                    
Query: 392 ggcaaccat 400
            ||||||||
Sbjct: 427 tgcaaccat 419
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>gb|BT025587.1| Arabidopsis thaliana At5g03030 mRNA, complete cds
          Length = 339

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 332 atcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgatt 391
           |||||| || ||||||||||| || ||||| || || || ||||| ||||| ||||||||
Sbjct: 297 atctttggcttcattgatcttagaagcaagatagtgactgcctccagcgtctgggtgatt 238

                    
Query: 392 ggcaaccat 400
            ||||||||
Sbjct: 237 tgcaaccat 229
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>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project)
          Length = 99008

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 332   atcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgatt 391
             |||||| || ||||||||||| || ||||| || || || ||||| ||||| ||||||||
Sbjct: 11532 atctttggcttcattgatcttagaagcaagatagtgactgcctccagcgtctgggtgatt 11591

                      
Query: 392   ggcaaccat 400
              ||||||||
Sbjct: 11592 tgcaaccat 11600
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>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project)
          Length = 104769

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                          
Query: 332    atcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgatt 391
              |||||| || ||||||||||| || ||||| || || || ||||| ||||| ||||||||
Sbjct: 103997 atctttggcttcattgatcttagaagcaagatagtgactgcctccagcgtctgggtgatt 104056

                       
Query: 392    ggcaaccat 400
               ||||||||
Sbjct: 104057 tgcaaccat 104065
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>gb|AY085893.1| Arabidopsis thaliana clone 19432 mRNA, complete sequence
          Length = 664

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 332 atcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgatt 391
           |||||| || ||||||||||| || ||||| || || || ||||| ||||| ||||||||
Sbjct: 486 atctttggcttcattgatcttagaagcaagatagtgactgcctccagcgtctgggtgatt 427

                    
Query: 392 ggcaaccat 400
            ||||||||
Sbjct: 426 tgcaaccat 418
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>ref|NM_032456.1| Homo sapiens BH-protocadherin (brain-heart) (PCDH7), transcript
            variant b, mRNA
          Length = 4921

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 39   caaatgtcatgcaaaactccac 60
            ||||||||||||||||||||||
Sbjct: 4765 caaatgtcatgcaaaactccac 4786
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 38      acaaatgtcatgcaaaactcca 59
               ||||||||||||||||||||||
Sbjct: 1170728 acaaatgtcatgcaaaactcca 1170749
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>gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, complete sequence
          Length = 160151

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 39     caaatgtcatgcaaaactccac 60
              ||||||||||||||||||||||
Sbjct: 138349 caaatgtcatgcaaaactccac 138370
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>gb|AC009220.10|AC009220 Homo sapiens chromosome 7 clone RP11-365F18, complete sequence
          Length = 184520

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 170    tgtccagaaatttcagtgatac 191
              ||||||||||||||||||||||
Sbjct: 101783 tgtccagaaatttcagtgatac 101804
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>dbj|AB006756.1| Homo sapiens mRNA for PCDH7 (BH-Pcdh)b, complete cds
          Length = 4454

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 39   caaatgtcatgcaaaactccac 60
            ||||||||||||||||||||||
Sbjct: 4324 caaatgtcatgcaaaactccac 4345
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>gb|AC115090.8| Homo sapiens chromosome 17, clone CTC-861O14, complete sequence
          Length = 173716

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     agatagatgaacaaatgtcat 48
              |||||||||||||||||||||
Sbjct: 144427 agatagatgaacaaatgtcat 144447
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>emb|BX833736.1|CNS0A203 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZD03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 664

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                       
Query: 332 atcttttgcctcattgatcttcgacgcaaggtaatggcttcctcctgcgtccgggtgatt 391
           |||||| || ||||||||||| || ||||| || |  || ||||| ||||| ||||||||
Sbjct: 461 atctttggcttcattgatcttagaagcaagatagtaactgcctccagcgtctgggtgatt 402

                    
Query: 392 ggcaaccat 400
            ||||||||
Sbjct: 401 tgcaaccat 393
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>gb|AC107835.8| Mus musculus chromosome 8, clone RP23-267M21, complete sequence
          Length = 179297

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 99     ccagcacaacttggtcttgga 119
              |||||||||||||||||||||
Sbjct: 107641 ccagcacaacttggtcttgga 107661
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>dbj|AP006406.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08E06, TM0296b,
            complete sequence
          Length = 24071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 299  cgaaccacctcctttagtttt 319
            |||||||||||||||||||||
Sbjct: 9775 cgaaccacctcctttagtttt 9755
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>emb|AL929037.3| Mouse DNA sequence from clone RP23-297K24 on chromosome 2, complete
             sequence
          Length = 156705

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   agttttccccagcaaaacatc 334
             |||||||||||||||||||||
Sbjct: 47654 agttttccccagcaaaacatc 47634
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>gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, complete sequence
          Length = 181577

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ctaggtgcagagtctggagg 237
              ||||||||||||||||||||
Sbjct: 101057 ctaggtgcagagtctggagg 101076
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>gb|AC134426.20| Mus musculus chromosome 1, clone RP24-342A12, complete sequence
          Length = 196208

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   ccccagcaaaacatcttttg 339
             ||||||||||||||||||||
Sbjct: 47853 ccccagcaaaacatcttttg 47872
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>emb|AL139258.13| Human DNA sequence from clone RP5-817C23 on chromosome 1p31.3-32.2
             Contains a heterogeneous nuclear ribonucleoprotein C
             (C1/C2) (HNRPC) pseudogene, complete sequence
          Length = 100369

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tgcagagtctggaggtgcaa 242
             ||||||||||||||||||||
Sbjct: 26179 tgcagagtctggaggtgcaa 26198
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>gb|AC156268.10| Mus musculus 10 BAC RP24-336P23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 164611

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    ccccagcaaaacatcttttg 339
              ||||||||||||||||||||
Sbjct: 133400 ccccagcaaaacatcttttg 133419
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>gb|AC162880.4| Mus musculus chromosome 1, clone RP24-275N11, complete sequence
          Length = 164201

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    ccccagcaaaacatcttttg 339
              ||||||||||||||||||||
Sbjct: 140073 ccccagcaaaacatcttttg 140092
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>gb|AC024106.14| Homo sapiens 3 BAC RP11-33K7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 157523

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    gtctgcttctagttctaggt 223
              ||||||||||||||||||||
Sbjct: 138035 gtctgcttctagttctaggt 138054
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>emb|BX547935.12| Zebrafish DNA sequence from clone CH211-207C1 in linkage group 16,
              complete sequence
          Length = 195252

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    tcttggaagtgtcaaacagt 132
              ||||||||||||||||||||
Sbjct: 163147 tcttggaagtgtcaaacagt 163166
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>gb|AC128690.5| Homo sapiens 3 BAC RP11-399P20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164809

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    gtctgcttctagttctaggt 223
              ||||||||||||||||||||
Sbjct: 126644 gtctgcttctagttctaggt 126625
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>gb|AC153929.3| Mus musculus 10 BAC RP24-364H18 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 173752

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   ccccagcaaaacatcttttg 339
             ||||||||||||||||||||
Sbjct: 19885 ccccagcaaaacatcttttg 19904
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>gb|AC099696.12| Mus musculus chromosome 1, clone RP23-453N3, complete sequence
          Length = 169022

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    agacatctaatgttctctgt 172
              ||||||||||||||||||||
Sbjct: 130094 agacatctaatgttctctgt 130113
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>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
              complete sequence
          Length = 174701

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    gtctgcttctagttctaggt 223
              ||||||||||||||||||||
Sbjct: 174611 gtctgcttctagttctaggt 174630
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     cctgcgtccgggtgattggc 394
               ||||||||||||||||||||
Sbjct: 3148703 cctgcgtccgggtgattggc 3148684


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,254,043
Number of Sequences: 3902068
Number of extensions: 4254043
Number of successful extensions: 94110
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 93921
Number of HSP's gapped (non-prelim): 190
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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