Clone Name | rbasd25e08 |
---|---|
Clone Library Name | barley_pub |
>GBLP_ORYSA (P49027) Guanine nucleotide-binding protein beta subunit-like| protein (GPB-LR) (RWD) Length = 334 Score = 74.3 bits (181), Expect = 7e-14 Identities = 33/36 (91%), Positives = 35/36 (97%) Frame = -1 Query: 218 MLYCTCLSWSADGSTLYAGYTDGTIRIYKISGFSYS 111 MLYCT L+WSADGSTLYAGYTDGTIRIYKISGFSY+ Sbjct: 298 MLYCTSLNWSADGSTLYAGYTDGTIRIYKISGFSYA 333
>GBLP_BRANA (Q39336) Guanine nucleotide-binding protein beta subunit-like| protein Length = 327 Score = 53.9 bits (128), Expect = 1e-07 Identities = 21/39 (53%), Positives = 31/39 (79%) Frame = -1 Query: 236 SAQSKXMLYCTCLSWSADGSTLYAGYTDGTIRIYKISGF 120 +A + ++YCT L+WSADGSTL++GYTDG IR++ I + Sbjct: 289 AATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGRY 327
>GBLP_ARATH (O24456) Guanine nucleotide-binding protein beta subunit-like| protein (WD-40 repeat auxin-dependent protein ARCA) Length = 327 Score = 53.9 bits (128), Expect = 1e-07 Identities = 21/39 (53%), Positives = 31/39 (79%) Frame = -1 Query: 236 SAQSKXMLYCTCLSWSADGSTLYAGYTDGTIRIYKISGF 120 +A + ++YCT L+WSADGSTL++GYTDG IR++ I + Sbjct: 289 AATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGRY 327
>GBLP_SOYBN (Q39836) Guanine nucleotide-binding protein beta subunit-like| protein Length = 325 Score = 53.9 bits (128), Expect = 1e-07 Identities = 21/39 (53%), Positives = 30/39 (76%) Frame = -1 Query: 236 SAQSKXMLYCTCLSWSADGSTLYAGYTDGTIRIYKISGF 120 +A K ++YCT L+WSADGSTL++GYTDG R++ I + Sbjct: 287 NANKKKVIYCTSLNWSADGSTLFSGYTDGVARVWAIGRY 325
>GBLP_MEDSA (O24076) Guanine nucleotide-binding protein beta subunit-like| protein Length = 325 Score = 53.1 bits (126), Expect = 2e-07 Identities = 20/35 (57%), Positives = 29/35 (82%) Frame = -1 Query: 224 KXMLYCTCLSWSADGSTLYAGYTDGTIRIYKISGF 120 K ++YCT L+WSADGSTL++GYTDG +R++ I + Sbjct: 291 KKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIGRY 325
>GBLP_TOBAC (P49026) Guanine nucleotide-binding protein beta subunit-like| protein Length = 326 Score = 52.8 bits (125), Expect = 2e-07 Identities = 21/33 (63%), Positives = 28/33 (84%) Frame = -1 Query: 218 MLYCTCLSWSADGSTLYAGYTDGTIRIYKISGF 120 ++YCT LSWSADGSTL++GYTDG IR++ I + Sbjct: 294 VIYCTSLSWSADGSTLFSGYTDGLIRVWGIDRY 326
>GBLP_NICPL (P93340) Guanine nucleotide-binding protein beta subunit-like| protein Length = 326 Score = 52.4 bits (124), Expect = 3e-07 Identities = 21/33 (63%), Positives = 27/33 (81%) Frame = -1 Query: 218 MLYCTCLSWSADGSTLYAGYTDGTIRIYKISGF 120 ++YCT L WSADGSTL++GYTDG IR++ I F Sbjct: 294 VIYCTSLGWSADGSTLFSGYTDGLIRVWGIGRF 326
>GBLP_CHLRE (P25387) Guanine nucleotide-binding protein beta subunit-like| protein Length = 318 Score = 50.1 bits (118), Expect = 1e-06 Identities = 20/38 (52%), Positives = 29/38 (76%) Frame = -1 Query: 242 N*SAQSKXMLYCTCLSWSADGSTLYAGYTDGTIRIYKI 129 N +++ + YC L+WSADGSTLY+GYTDG IR++ + Sbjct: 277 NITSKKAQVPYCVSLAWSADGSTLYSGYTDGQIRVWAV 314
>GBLP_DICDI (P46800) Guanine nucleotide-binding protein beta subunit-like| protein Length = 329 Score = 47.8 bits (112), Expect = 7e-06 Identities = 20/28 (71%), Positives = 22/28 (78%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C L+WSADGS LYAGY DG IR+YK S Sbjct: 300 CLSLAWSADGSVLYAGYNDGLIRVYKSS 327
>GBLP_ORENI (O42249) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 45.8 bits (107), Expect = 3e-05 Identities = 17/28 (60%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD IR+++++ Sbjct: 286 CTSLAWSADGQTLFAGYTDNLIRVWQVT 313
>GBLP_BRARE (O42248) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 45.8 bits (107), Expect = 3e-05 Identities = 17/28 (60%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD IR+++++ Sbjct: 286 CTSLAWSADGQTLFAGYTDNLIRVWQVT 313
>GBLP_RAT (P63245) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 45.4 bits (106), Expect = 4e-05 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD +R+++++ Sbjct: 285 CTSLAWSADGQTLFAGYTDNLVRVWQVT 312
>GBLP_PIG (P63246) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 45.4 bits (106), Expect = 4e-05 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD +R+++++ Sbjct: 285 CTSLAWSADGQTLFAGYTDNLVRVWQVT 312
>GBLP_MOUSE (P68040) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) (p205) (12-3) Length = 316 Score = 45.4 bits (106), Expect = 4e-05 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD +R+++++ Sbjct: 285 CTSLAWSADGQTLFAGYTDNLVRVWQVT 312
>GBLP_MACFA (Q4R7Y4) Guanine nucleotide-binding protein beta subunit 2-like 1| Length = 316 Score = 45.4 bits (106), Expect = 4e-05 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD +R+++++ Sbjct: 285 CTSLAWSADGQTLFAGYTDNLVRVWQVT 312
>GBLP_HUMAN (P63244) Guanine nucleotide-binding protein beta subunit 2-like 1| (Guanine nucleotide-binding protein beta subunit-like protein 12.3) (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 45.4 bits (106), Expect = 4e-05 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD +R+++++ Sbjct: 285 CTSLAWSADGQTLFAGYTDNLVRVWQVT 312
>GBLP_BOVIN (P63243) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 45.4 bits (106), Expect = 4e-05 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD +R+++++ Sbjct: 285 CTSLAWSADGQTLFAGYTDNLVRVWQVT 312
>GBLP_TRYBR (P69104) Guanine nucleotide-binding protein beta subunit-like| protein (Activated protein kinase C receptor homolog) (Track) Length = 318 Score = 45.4 bits (106), Expect = 4e-05 Identities = 17/28 (60%), Positives = 23/28 (82%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C ++WSADGSTLY+GYTD IR++ +S Sbjct: 288 CVSIAWSADGSTLYSGYTDNVIRVWGVS 315
>GBLP_TRYBB (P69103) Guanine nucleotide-binding protein beta subunit-like| protein (Activated protein kinase C receptor homolog) Length = 318 Score = 45.4 bits (106), Expect = 4e-05 Identities = 17/28 (60%), Positives = 23/28 (82%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C ++WSADGSTLY+GYTD IR++ +S Sbjct: 288 CVSIAWSADGSTLYSGYTDNVIRVWGVS 315
>GBLP_CHICK (P63247) Guanine nucleotide-binding protein beta subunit 2-like 1| (Guanine nucleotide-binding protein beta subunit-like protein 12.3) (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 317 Score = 45.4 bits (106), Expect = 4e-05 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 CT L+WSADG TL+AGYTD +R+++++ Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVWQVT 313
>GBLP_CAEEL (Q21215) Guanine nucleotide-binding protein beta subunit 2-like 1| Length = 324 Score = 44.7 bits (104), Expect = 6e-05 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C L+WS DG TL+AGYTD IR+Y++S Sbjct: 292 CISLAWSQDGQTLFAGYTDNIIRVYQVS 319
>GBLP_BIOGL (Q93134) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 316 Score = 43.9 bits (102), Expect = 1e-04 Identities = 17/28 (60%), Positives = 23/28 (82%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C L+WSADG TL+AGYTD IR++++S Sbjct: 285 CLSLAWSADGQTLFAGYTDKLIRVWQVS 312
>GBLP_DROME (O18640) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C homolog) Length = 318 Score = 43.9 bits (102), Expect = 1e-04 Identities = 16/28 (57%), Positives = 23/28 (82%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C L+WS DG TL+AGY+D TIR++++S Sbjct: 287 CLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
>GBLP_HYDAT (Q25189) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 43.5 bits (101), Expect = 1e-04 Identities = 16/28 (57%), Positives = 23/28 (82%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C L+WSADG TL+AGYTD IR+++++ Sbjct: 286 CISLAWSADGQTLFAGYTDNLIRVWQVT 313
>GBLP_YEAST (P38011) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 318 Score = 41.2 bits (95), Expect = 7e-04 Identities = 15/28 (53%), Positives = 22/28 (78%) Frame = -1 Query: 212 YCTCLSWSADGSTLYAGYTDGTIRIYKI 129 + L+WSADG TL+AGYTD IR++++ Sbjct: 287 HAVSLAWSADGQTLFAGYTDNVIRVWQV 314
>GBLP_NEUCR (Q01369) Guanine nucleotide-binding protein beta subunit-like| protein (Cross-pathway control WD-repeat protein cpc-2) Length = 316 Score = 40.8 bits (94), Expect = 9e-04 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKI 129 C L+WSADG TL+AGYTD IR + + Sbjct: 286 CVSLAWSADGQTLFAGYTDNIIRAWGV 312
>GBLP_LEIMA (Q25306) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) Length = 312 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/28 (53%), Positives = 22/28 (78%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C ++WSADG+TLY+G+ D IR++ IS Sbjct: 282 CISIAWSADGNTLYSGHKDNLIRVWSIS 309
>GBLP_LEIIN (P62884) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) (LiP36) (p36Li) Length = 312 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/28 (53%), Positives = 22/28 (78%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C ++WSADG+TLY+G+ D IR++ IS Sbjct: 282 CISIAWSADGNTLYSGHKDNLIRVWSIS 309
>GBLP_LEICH (P62883) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) Length = 312 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/28 (53%), Positives = 22/28 (78%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C ++WSADG+TLY+G+ D IR++ IS Sbjct: 282 CISIAWSADGNTLYSGHKDNLIRVWSIS 309
>GBLP_SCHPO (Q10281) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) Length = 314 Score = 38.5 bits (88), Expect = 0.004 Identities = 13/28 (46%), Positives = 22/28 (78%) Frame = -1 Query: 209 CTCLSWSADGSTLYAGYTDGTIRIYKIS 126 C L+WS DG TL++G+TD IR+++++ Sbjct: 286 CISLTWSPDGQTLFSGWTDNLIRVWQVT 313
>ARPC1_YEAST (P38328) Probable ARP2/3 complex 41 kDa subunit (p41-ARC)| Length = 384 Score = 33.1 bits (74), Expect = 0.18 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -1 Query: 203 CLSWSADGSTLYAGYTDGTIRIYKISGF 120 CLSW A+G L AG TDG +R++ SGF Sbjct: 158 CLSWHANGVLLAAGGTDGFMRVF--SGF 183
>SIF2_YEAST (P38262) SIR4-interacting protein SIF2| Length = 535 Score = 32.7 bits (73), Expect = 0.24 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = -1 Query: 236 SAQSKXMLYCTCLSWSADGSTLYAGYTDGTIRIYKISG 123 ++ K TCL+WS DG+++ G +G +R++ +G Sbjct: 214 ASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG 251
>WDR3_HUMAN (Q9UNX4) WD-repeat protein 3| Length = 943 Score = 31.2 bits (69), Expect = 0.69 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKI 129 TCL S DG L GY DG+IRI+ + Sbjct: 69 TCLCPSPDGLHLAVGYEDGSIRIFSL 94
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 31.2 bits (69), Expect = 0.69 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 T L W+ DGS L G DG RI+K G Sbjct: 414 TSLDWNCDGSLLATGSYDGYARIWKTDG 441
>WDR18_HUMAN (Q9BV38) WD-repeat protein 18| Length = 432 Score = 30.8 bits (68), Expect = 0.90 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKI 129 TCLS S DGS L +G D T+R++ + Sbjct: 273 TCLSVSTDGSVLLSGSHDETVRLWDV 298
>Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491| Length = 348 Score = 30.8 bits (68), Expect = 0.90 Identities = 12/28 (42%), Positives = 21/28 (75%) Frame = -1 Query: 200 LSWSADGSTLYAGYTDGTIRIYKISGFS 117 L++S DG+TLY+G D T++I+ +S + Sbjct: 320 LAFSPDGNTLYSGAEDKTVKIWDLSALA 347
>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C| Length = 515 Score = 30.4 bits (67), Expect = 1.2 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 Query: 203 CLSWSADGSTLYAGYTDGTIRIY 135 C+SWS DG + G D TIR++ Sbjct: 191 CVSWSPDGEVIATGSMDNTIRLW 213
>UTP15_CHICK (Q5F3D7) U3 small nucleolar RNA-associated protein 15 homolog| Length = 520 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -1 Query: 203 CLSWSADGSTLYAGYTDGTIRIYKISG 123 C ++ DG L AG +G+IR++ ISG Sbjct: 85 CATYRDDGKLLVAGSEEGSIRLFDISG 111
>INSRR_RAT (Q64716) Insulin receptor-related protein precursor (EC 2.7.10.1)| (IRR) (IR-related receptor) (Fragments) Length = 581 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 4/55 (7%) Frame = +2 Query: 125 QRSCRCEWFHQCNQHRECCHPR----SSSSKCSRAXVCFEHSNFFKVTMPKTRPG 277 QR C C C ECCH S + RA V H F V +P PG Sbjct: 211 QRVCPCPRGLACTVGGECCHSECLGGCSQPEDPRACVACRHLYFQGVCLPACPPG 265
>WDR18_MOUSE (Q4VBE8) WD-repeat protein 18| Length = 431 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKI 129 TCLS S DGS L +G D ++R++ + Sbjct: 273 TCLSVSTDGSVLLSGSHDESVRLWDV 298
>IGF1R_HUMAN (P08069) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) (CD221 antigen) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 recepto Length = 1367 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Frame = +2 Query: 158 CNQHRECCHPRSSSSKCS-----RAXVCFEHSNFFKVTMPKTRPGQLRL-GARC 301 C ++ ECCHP S CS A V H + V +P P R G RC Sbjct: 224 CTENNECCHPECLGS-CSAPDNDTACVACRHYYYAGVCVPACPPNTYRFEGWRC 276
>GEMI5_HUMAN (Q8TEQ6) Gem-associated protein 5 (Gemin5)| Length = 1508 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKI 129 T +SW ADG + G DG+I I++I Sbjct: 540 TEISWKADGKIMALGNEDGSIEIFQI 565
>GBB_ARATH (P49177) Guanine nucleotide-binding protein beta subunit| (transducin) (AGB1) Length = 377 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -1 Query: 284 LIGRVVFSASLL*RN*SAQSKXMLYCTCLSWSADGSTLYAGYTDGTIRIYKISG 123 L+G VV L Q +CL SADGS L G D ++I+ G Sbjct: 325 LLGEVVLDLGL------QQDSHRNRISCLGLSADGSALCTGSWDSNLKIWAFGG 372
>PDK4_SPETR (O88345) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4) Length = 412 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -1 Query: 179 STLYAGYTDGTIRIYKISGFSYSS*IMYLVLVASVPVKRAVV 54 S LYA Y G + +Y +SG+ + I+YL ++S V++ V Sbjct: 337 SRLYAKYFQGDLNLYSLSGYGTDA-IIYLKALSSESVEKLPV 377
>WDR18_RAT (Q499N3) WD-repeat protein 18| Length = 431 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKI 129 TCLS S DGS L +G D ++R++ + Sbjct: 273 TCLSVSTDGSILLSGSHDESVRLWDV 298
>MT1_SCYSE (P02805) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 58 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = +2 Query: 131 SCRCEWFHQCNQHRECCHPRSSSSKCSRAXVC 226 SCRC +C+ +C + S CS+A C Sbjct: 24 SCRCSPCEKCSSGCKCANKEECSKTCSKACSC 55
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -1 Query: 200 LSWSADGSTLYAGYTDGTIRIYKISG 123 + WS DG L DGT R++ +SG Sbjct: 1594 VDWSPDGQMLVTASNDGTARLWDLSG 1619
>KDTA_RICPR (Q9ZE58) 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)| (KDO transferase) Length = 461 Score = 28.9 bits (63), Expect = 3.4 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -3 Query: 225 QTXALLHLLELERGWQHSLCWLH 157 + +L++ L LER + HSL W+H Sbjct: 74 RNASLMYKLSLERSYAHSLVWIH 96
>PDK4_MOUSE (O70571) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4) Length = 412 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -1 Query: 179 STLYAGYTDGTIRIYKISGFSYSS*IMYLVLVASVPVKRAVV 54 S LYA Y G + +Y +SG+ + I+YL ++S V++ V Sbjct: 337 SRLYAKYFQGDLNLYSMSGYGTDA-IIYLKALSSESVEKLPV 377
>STLP2_ARATH (Q39221) Sec12-like protein 2| Length = 393 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -1 Query: 200 LSWSADGSTLYAGYTDGTIRIYK 132 L+++ +GS L AG DGT+R++K Sbjct: 159 LAFNPEGSVLAAGAEDGTLRVFK 181
>PDK4_HUMAN (Q16654) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4) Length = 411 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -1 Query: 179 STLYAGYTDGTIRIYKISGFSYSS*IMYLVLVASVPVKRAVV 54 S LYA Y G + +Y +SG+ + I+YL ++S +++ V Sbjct: 337 SRLYAKYFQGDLNLYSLSGYGTDA-IIYLKALSSESIEKLPV 377
>GEMI5_MOUSE (Q8BX17) Gem-associated protein 5 (Gemin5)| Length = 1502 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKI 129 T +SW DG L G DG+I I+++ Sbjct: 540 TEISWKGDGKVLALGNEDGSIEIFQV 565
>IGF1R_MOUSE (Q60751) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1373 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Frame = +2 Query: 158 CNQHRECCHPRSSSS----KCSRAXVCFEHSNFFKVTMPKTRPGQLRL-GARC 301 C ++ ECCHP S + V H + V +P PG R G RC Sbjct: 224 CTENNECCHPECLGSCHTPDDNTTCVACRHYYYKGVCVPACPPGTYRFEGWRC 276
>IGF1R_RAT (P24062) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1370 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Frame = +2 Query: 158 CNQHRECCHPRSSSS----KCSRAXVCFEHSNFFKVTMPKTRPGQLRL-GARC 301 C ++ ECCHP S + V H + V +P PG R G RC Sbjct: 224 CTENNECCHPECLGSCHTPDDNTTCVACRHYYYKGVCVPACPPGTYRFEGWRC 276
>PDK4_RAT (O54937) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4) Length = 412 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -1 Query: 179 STLYAGYTDGTIRIYKISGFSYSS*IMYLVLVASVPVKRAVV 54 S LYA Y G + +Y +SG+ + I+YL ++S +++ V Sbjct: 337 SRLYAKYFQGDLNLYSMSGYGTDA-IIYLKALSSESIEKLPV 377
>YLD4_SCHPO (O42656) Hypothetical protein C1851.04c in chromosome I| Length = 1052 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISGF 120 T LS +A S LY G DGT+ Y+I F Sbjct: 261 TVLSTNARFSLLYVGTADGTVYAYEIRDF 289
>YG4G_YEAST (P42939) Hypothetical 12.0 kDa protein in ADE3-SER2 intergenic| region Length = 101 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/60 (25%), Positives = 25/60 (41%) Frame = +2 Query: 26 PARTVKKKKIPQPVLPEQRPLKQDT*XXXXXXTQRSCRCEWFHQCNQHRECCHPRSSSSK 205 P TV + ++P+ LP +P R C W+ +C+ + C SS+K Sbjct: 23 PQETVTRFQMPEFKLPALQPT-------------RDLLCPWYEECDNITKVCQLHDSSNK 69
>SLP1_SCHPO (P78972) WD-repeat-containing protein slp1| Length = 488 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -1 Query: 233 AQSKXMLYCTCLSWSADGSTLYAGYTDGTIRIYKI 129 A++ Y + WS DGS L G +G + IY + Sbjct: 216 AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 250
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC| 2.7.11.1) Length = 742 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -1 Query: 212 YCTCLSWSADGSTLYAGYTDGTIRIYKIS 126 Y +++S DGS + +G DGTIR++ ++ Sbjct: 587 YVYAVAFSPDGSMVASGSRDGTIRLWDVA 615
>GBB_MAIZE (P49178) Guanine nucleotide-binding protein beta subunit| Length = 380 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 +CL S+DGS L G D ++I+ SG Sbjct: 348 SCLGMSSDGSALCTGSWDKNLKIWAFSG 375
>CWF17_SCHPO (O94620) Cell cycle control protein cwf17| Length = 340 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISGFS 117 T L+ S DGS+L + D T+RI+ + F+ Sbjct: 223 TSLAISKDGSSLLSNSMDNTVRIFDVKPFA 252
>HERC2_HUMAN (O95714) HECT domain and RCC1-like domain-containing protein 2| Length = 4834 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 Query: 14 QHITPARTVKKKKIPQPVLP 73 QHI PAR ++K+ P P LP Sbjct: 2441 QHIHPARVKRRKQSPVPALP 2460
>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) Length = 833 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +2 Query: 137 RCEWFHQCNQHRECCHPRSSSSKC 208 RCE H C CHPRS + +C Sbjct: 143 RCE--HACQCQHGTCHPRSGACRC 164
>PWP2_YEAST (P25635) Periodic tryptophan protein 2 (U3 small nucleolar| RNA-associated protein 1) (U3 snoRNA-associated protein 1) Length = 923 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISGFS 117 +CLS+S + S L + D TIRI+ I G S Sbjct: 477 SCLSFSQENSVLASASWDKTIRIWSIFGRS 506
>CTX80_EUPOC (Q9N9X3) Ciliary WD repeat-containing protein ctxp80| Length = 716 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 203 CLSWSADGSTLYAGYTDGTIRIYKISGFS 117 C+++S DGS L G D I IY + +S Sbjct: 536 CMAYSPDGSMLAVGSHDNNIYIYSSADYS 564
>UTP15_MOUSE (Q8C7V3) U3 small nucleolar RNA-associated protein 15 homolog| (Src-associated protein SAW) Length = 528 Score = 27.7 bits (60), Expect = 7.7 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -1 Query: 203 CLSWSADGSTLYAGYTDGTIRIYKISG 123 C ++ DG L AG DG ++++ I+G Sbjct: 85 CATFRQDGQLLVAGSEDGVVQLFDING 111
>YQS1_CAEEL (Q09309) Hypothetical WD-repeat protein F21H12.1| Length = 454 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -1 Query: 227 SKXMLYCTCLSWSADGSTLYAGYTDGTIRIYKI 129 S L +CLSWS DG L D +I ++ + Sbjct: 64 SAHCLPVSCLSWSRDGRKLLTSSADNSIAMFDV 96
>GBB_ORYSA (Q40687) Guanine nucleotide-binding protein beta subunit| Length = 380 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 +CL S+DGS L G D ++I+ SG Sbjct: 348 SCLGLSSDGSALCTGSWDKNLKIWAFSG 375
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +2 Query: 137 RCEWFHQCNQHRECCHPRSSSSKC 208 RCE H C CHPRS + +C Sbjct: 151 RCE--HACQCQHGTCHPRSGACRC 172
>E41L3_MOUSE (Q9WV92) Band 4.1-like protein 3 (4.1B) (Differentially expressed| in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1) Length = 929 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = +2 Query: 221 VCFEHSNFFKVTMPKTRPGQ-LRLGARCR 304 VC EH FF++ +P+ P + L LG++ R Sbjct: 387 VCVEHHTFFRLLLPEAPPKKFLTLGSKFR 415
>E41L3_HUMAN (Q9Y2J2) Band 4.1-like protein 3 (4.1B) (Differentially expressed| in adenocarcinoma of the lung protein 1) (DAL-1) Length = 1087 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = +2 Query: 221 VCFEHSNFFKVTMPKTRPGQ-LRLGARCR 304 VC EH FF++ +P+ P + L LG++ R Sbjct: 379 VCVEHHTFFRLLLPEAPPKKFLTLGSKFR 407
>GBB_SOLTU (P93563) Guanine nucleotide-binding protein beta subunit| Length = 377 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 +CL SADGS L G D ++I+ G Sbjct: 345 SCLGLSADGSALCTGSWDTNLKIWAFGG 372
>GBB2_TOBAC (P93398) Guanine nucleotide-binding protein beta subunit 2| Length = 377 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 +CL SADGS L G D ++I+ G Sbjct: 345 SCLGLSADGSALCTGSWDTNLKIWAFGG 372
>GBB1_TOBAC (P93397) Guanine nucleotide-binding protein beta subunit 1| Length = 377 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 +CL SADGS L G D ++I+ G Sbjct: 345 SCLGLSADGSALCTGSWDTNLKIWAFGG 372
>CAC2_YEAST (Q04199) Chromatin assembly factor 1 subunit p60 (CAF-1 60 kDa| subunit) Length = 468 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDG 150 T L+WS DGSTL TDG Sbjct: 377 TDLAWSEDGSTLLISSTDG 395
>GBB3_TOBAC (Q40507) Guanine nucleotide-binding protein beta subunit| Length = 375 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 +CL SADGS L G D ++I+ G Sbjct: 345 SCLGLSADGSALCTGSWDTNLKIWAFGG 372
>LY6D_HUMAN (Q14210) Lymphocyte antigen Ly-6D precursor (E48 antigen)| Length = 128 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 179 CHPRSSSSKCSRAXVCFEHSNFFKVT 256 CH +SSS C + VC S F K T Sbjct: 23 CHVCTSSSNCKHSVVCPASSRFCKTT 48
>ROP_DROME (Q07327) Protein ROP| Length = 597 Score = 27.3 bits (59), Expect = 10.0 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +3 Query: 27 LQGQSKKRRYHSPFYRNRGH*NKIHNLARVAE-PRDLVDANGSISVTSI 170 L+G+++ YH+P GH +K A+V PR +V G +S++ + Sbjct: 510 LEGRAQNTNYHAPTSARYGHWHKDKGQAQVKNVPRLIVFIVGGVSMSEM 558
>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like| 1Y protein) (Transducin-beta-like 1, Y-linked) Length = 522 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 T L W++DG+ L G DG RI+ +G Sbjct: 239 TSLDWNSDGTLLAMGSYDGFARIWTENG 266
>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) Length = 527 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 206 TCLSWSADGSTLYAGYTDGTIRIYKISG 123 T L W++DG+ L G DG RI+ G Sbjct: 242 TSLDWNSDGTLLATGSYDGFARIWTEDG 269 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,983,756 Number of Sequences: 219361 Number of extensions: 660606 Number of successful extensions: 2445 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 2235 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2443 length of database: 80,573,946 effective HSP length: 78 effective length of database: 63,463,788 effective search space used: 1523130912 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)