ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INHB_DROME (O61643) Inhibin beta chain precursor (Activin beta c... 30 4.5
2ATG26_LEPMC (Q8NJS1) Sterol 3-beta-glucosyltransferase (EC 2.4.1... 30 5.8
3SEC8_YEAST (P32855) Exocyst complex component SEC8 29 10.0
4O2T10_HUMAN (Q8NGZ9) Olfactory receptor 2T10 (Olfactory receptor... 29 10.0

>INHB_DROME (O61643) Inhibin beta chain precursor (Activin beta chain)|
          Length = 946

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
 Frame = +2

Query: 299 CFLTAHLQCVCSSASI*PVIIQTCC*LIFNCV*CTPIHQNLDIPVKKIMRRGLS*SENLF 478
           CF     QC+C       V+++ CC    NC  C  +      P    MR+ ++  E   
Sbjct: 21  CFFNC--QCICCRQGCCVVVVKCCCCFNLNC--CNSLGSRKSFPQPAAMRKKVADLE--- 73

Query: 479 TRMRRVI*TQTFLCPILQVKLW-RGIGLPVTSC 574
                V+    F+  IL +  W   +   +TSC
Sbjct: 74  -----VLRVSRFVAVILVLARWVTAVATLLTSC 101



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>ATG26_LEPMC (Q8NJS1) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26) (UDP-glycosyltransferase
           51)
          Length = 1456

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = -3

Query: 305 KNNKSVVYGVYSELPEWTEPGKGLPETSCFGLSTAQGLIEFKCESSTSKQSWVHGVQNLL 126
           +N  ++ Y + +E+    EP +   E + F ++T +   +FK +S  S + WV  +Q ++
Sbjct: 327 RNRINLQYAISAEV---LEPKRKGDEETSFVVTTDERTYQFKADSVASAREWVKSIQKVI 383



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>SEC8_YEAST (P32855) Exocyst complex component SEC8|
          Length = 1065

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 15/71 (21%), Positives = 36/71 (50%)
 Frame = -3

Query: 278 VYSELPEWTEPGKGLPETSCFGLSTAQGLIEFKCESSTSKQSWVHGVQNLLQQVDVADQV 99
           ++ E+P + + GKGL ++  F   T   +++F   S     +W+ G++  +   +V+ + 
Sbjct: 721 LFKEIPHFYQAGKGLSKSDLFNNLTLDTILQFSA-SVLWILNWLPGLKKAINIDEVSQEP 779

Query: 98  GHRLETLKLNW 66
               + L+ +W
Sbjct: 780 MLDADRLRSSW 790



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>O2T10_HUMAN (Q8NGZ9) Olfactory receptor 2T10 (Olfactory receptor OR1-64)|
          Length = 312

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 272 CIPHKL-HFYCFLTAHLQCVCSSASI*PVIIQTCC 373
           C  H++ HF+C + A L+  CS  S+  + +  CC
Sbjct: 169 CRSHEIQHFFCEVPAVLKLSCSDTSLYKIFMYLCC 203


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,596,418
Number of Sequences: 219361
Number of extensions: 1653408
Number of successful extensions: 3288
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3288
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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