ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197734.1| Oryza sativa (japonica cultivar-group) unknown ... 68 4e-08
2gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 68 4e-08
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
4dbj|AK066334.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 68 4e-08
6dbj|AK059709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
7gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, comple... 44 0.55
8gb|AC102290.7| Mus musculus chromosome 3, clone RP24-359J7, comp... 42 2.2
9gb|AC160652.2| Pan troglodytes BAC clone CH251-490H15 from chrom... 42 2.2
10emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21... 42 2.2
11gb|AC148347.13| Medicago truncatula clone mth2-26g24, complete s... 42 2.2
12gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete se... 42 2.2
13emb|CR533578.7| Zebrafish DNA sequence from clone CH211-216F21 i... 42 2.2
14ref|XM_503230.1| Yarrowia lipolytica CLIB122, YALI0D24409g predi... 42 2.2
15emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chr... 42 2.2
16emb|AL390244.19| Human DNA sequence from clone RP11-280F22 on ch... 42 2.2
17gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, com... 42 2.2
18gb|AC148525.14| Medicago truncatula clone mth2-24i13, complete s... 42 2.2
19gb|AC161823.4| Pan troglodytes BAC clone CH251-142M23 from chrom... 42 2.2
20emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 2.2
21gb|AC152951.2| Mus musculus 10 BAC RP23-451J19 (Roswell Park Can... 42 2.2
22gb|AC109196.12| Mus musculus chromosome 5, clone RP23-313F5, com... 40 8.6
23gb|AC159317.3| Mus musculus BAC clone RP23-76I20 from chromosome... 40 8.6
24ref|XM_457072.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.6
25gb|AC140261.3| Mus musculus BAC clone RP23-313M16 from chromosom... 40 8.6
26gb|AC108410.9| Mus musculus chromosome 7, clone RP23-480A17, com... 40 8.6
27gb|AF026214.1| Caenorhabditis elegans cosmid F52H2, complete seq... 40 8.6
28emb|AL353752.6| Human DNA sequence from clone RP11-497K15 on chr... 40 8.6
29emb|CR405706.7| Zebrafish DNA sequence from clone CH211-233D12 i... 40 8.6
30emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 40 8.6
31emb|BX936325.9| Zebrafish DNA sequence from clone CH211-74P16 in... 40 8.6
32gb|AC154350.3| Mus musculus BAC clone RP23-225B15 from chromosom... 40 8.6
33gb|AC074043.12| Homo sapiens 3 BAC RP11-561O4 (Roswell Park Canc... 40 8.6
34gb|AC103813.2| Homo sapiens chromosome 8, clone CTD-2253H3, comp... 40 8.6
35gb|AC026798.5| Homo sapiens chromosome 5 clone CTD-2312P21, comp... 40 8.6
36gb|AC022973.5| Homo sapiens, clone RP11-473O4, complete sequence 40 8.6
37gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 8.6
38gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosom... 40 8.6
39ref|NM_073971.1| Caenorhabditis elegans F53F4.7 (F53F4.7) mRNA, ... 40 8.6
40gb|AC092141.4| Homo sapiens chromosome 16 clone RP11-478K1, comp... 40 8.6
41emb|BX000461.4| Zebrafish DNA sequence from clone DKEY-170E5, co... 40 8.6
42dbj|AB073301.1| Coturnix chinensis mitochondrial DNA, complete g... 40 8.6
43emb|Z77663.3|CEF53F4 Caenorhabditis elegans Cosmid F53F4, comple... 40 8.6
44emb|AL353668.20| Human DNA sequence from clone RP11-184B18 on ch... 40 8.6
45emb|AL929266.9| Zebrafish DNA sequence from clone CH211-67E16 in... 40 8.6
46dbj|AP005715.3| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 8.6
47emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on ch... 40 8.6
48gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, comple... 40 8.6 
>ref|NM_197734.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0042H09.6), mRNA
          Length = 1171

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 177
            |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 1119 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 1060

                                                          
Query: 178  cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 223
            ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 1059 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 1014



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 559 acctgtgacctcttgttgatgtanattgaaacccgtctcttgtgtaaat 607
           ||||||||||||||||||||||| || || || ||| ||||||||||||
Sbjct: 885 acctgtgacctcttgttgatgtatatagatactcgtgtcttgtgtaaat 837



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 316 cctccaatgtgtttgctcttcagcttcaatatgacctgt 354
           ||||| |||||||| ||||||| ||||||||||||||||
Sbjct: 918 cctcctatgtgtttactcttcaacttcaatatgacctgt 880
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 118   acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 177
             |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 72901 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 72960

                                                           
Query: 178   cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 223
             ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 72961 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 73006



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 556   cctacctgtgacctcttgttgatgtanattgaaacccgtctcttgtgtaaat 607
             |||||||||||||||||||||||||| || || || ||| ||||||||||||
Sbjct: 73322 cctacctgtgacctcttgttgatgtatatagatactcgtgtcttgtgtaaat 73373



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 316   cctccaatgtgtttgctcttcagcttcaatatgacctgtaattat 360
             ||||| |||||||| ||||||| |||||||||||||||| |||||
Sbjct: 73203 cctcctatgtgtttactcttcaacttcaatatgacctgttattat 73247
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                            
Query: 118      acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 177
                |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 21537156 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 21537097

                                                              
Query: 178      cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 223
                ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 21537096 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 21537051



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 556      cctacctgtgacctcttgttgatgtanattgaaacccgtctcttgtgtaaat 607
                |||||||||||||||||||||||||| || || || ||| ||||||||||||
Sbjct: 21536735 cctacctgtgacctcttgttgatgtatatagatactcgtgtcttgtgtaaat 21536684



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 316      cctccaatgtgtttgctcttcagcttcaatatgacctgtaattat 360
                ||||| |||||||| ||||||| |||||||||||||||| |||||
Sbjct: 21536854 cctcctatgtgtttactcttcaacttcaatatgacctgttattat 21536810
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>dbj|AK066334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063K07, full
            insert sequence
          Length = 1390

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 118  acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 177
            |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 1174 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 1115

                                                          
Query: 178  cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 223
            ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 1114 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 1069



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 559 acctgtgacctcttgttgatgtanattgaaacccgtctcttgtgtaaat 607
           ||||||||||||||||||||||| || || || ||| ||||||||||||
Sbjct: 940 acctgtgacctcttgttgatgtatatagatactcgtgtcttgtgtaaat 892



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 316 cctccaatgtgtttgctcttcagcttcaatatgacctgt 354
           ||||| |||||||| ||||||| ||||||||||||||||
Sbjct: 973 cctcctatgtgtttactcttcaacttcaatatgacctgt 935
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                            
Query: 118      acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 177
                |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 21548819 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 21548760

                                                              
Query: 178      cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 223
                ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 21548759 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 21548714



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 556      cctacctgtgacctcttgttgatgtanattgaaacccgtctcttgtgtaaat 607
                |||||||||||||||||||||||||| || || || ||| ||||||||||||
Sbjct: 21548398 cctacctgtgacctcttgttgatgtatatagatactcgtgtcttgtgtaaat 21548347



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 316      cctccaatgtgtttgctcttcagcttcaatatgacctgtaattat 360
                ||||| |||||||| ||||||| |||||||||||||||| |||||
Sbjct: 21548517 cctcctatgtgtttactcttcaacttcaatatgacctgttattat 21548473
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>dbj|AK059709.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E11, full
           insert sequence
          Length = 329

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 87/106 (82%)
 Strand = Plus / Minus

                                                                       
Query: 118 acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 177
           |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 113 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 54

                                                         
Query: 178 cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 223
           ||||  ||||  | ||| |||||||| || |||| |||||||||||
Sbjct: 53  cactcaaactttaccagaccttgtgccgtgctcaggccaaagcagc 8
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>gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, complete sequence
          Length = 131359

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 74    gttttaatgtttctagcctgtgccct 99
             ||||||||||||||| ||||||||||
Sbjct: 71687 gttttaatgtttctatcctgtgccct 71662
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>gb|AC102290.7| Mus musculus chromosome 3, clone RP24-359J7, complete sequence
          Length = 175819

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 282    ataaactacacttttattgtttttt 306
              ||||||||||||||| |||||||||
Sbjct: 106408 ataaactacactttttttgtttttt 106384
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>gb|AC160652.2| Pan troglodytes BAC clone CH251-490H15 from chromosome 6, complete
              sequence
          Length = 169342

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    tggtgctgctctcacacttga 184
              |||||||||||||||||||||
Sbjct: 146639 tggtgctgctctcacacttga 146659
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>emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21 on chromosome 3,
              complete sequence
          Length = 130617

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 33     aaaattttgattcatgtacta 53
              |||||||||||||||||||||
Sbjct: 127092 aaaattttgattcatgtacta 127112
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>gb|AC148347.13| Medicago truncatula clone mth2-26g24, complete sequence
          Length = 114712

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     aaaattttgattcatgtacta 53
              |||||||||||||||||||||
Sbjct: 105682 aaaattttgattcatgtacta 105662
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>gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete sequence
          Length = 138853

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 33  aaaattttgattcatgtacta 53
           |||||||||||||||||||||
Sbjct: 554 aaaattttgattcatgtacta 534
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>emb|CR533578.7| Zebrafish DNA sequence from clone CH211-216F21 in linkage group 16,
              complete sequence
          Length = 214872

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 366    cttgctgttaactgatattca 386
              |||||||||||||||||||||
Sbjct: 112721 cttgctgttaactgatattca 112741
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>ref|XM_503230.1| Yarrowia lipolytica CLIB122, YALI0D24409g predicted mRNA
          Length = 1773

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 107 cggctacatcaacctgctgga 127
           |||||||||||||||||||||
Sbjct: 699 cggctacatcaacctgctgga 719
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>emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chromosome 6 Contains a novel
              pseudogene, part of the KCNQ5 gene for potassium
              voltage-gated channel KQT-like subfamily member 5, and a
              phosphoglycerate mutase 1 (brain) (PGAM1) pseudogene,
              complete sequence
          Length = 154998

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 164    tggtgctgctctcacacttga 184
              |||||||||||||||||||||
Sbjct: 137487 tggtgctgctctcacacttga 137467
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>emb|AL390244.19| Human DNA sequence from clone RP11-280F22 on chromosome 10, complete
             sequence
          Length = 101530

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 433   taagaaaataatgagaagggg 453
             |||||||||||||||||||||
Sbjct: 21309 taagaaaataatgagaagggg 21329
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>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence
          Length = 204891

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 282    ataaactacacttttattgtttttt 306
              ||||||||||||||| |||||||||
Sbjct: 110298 ataaactacactttttttgtttttt 110322
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>gb|AC148525.14| Medicago truncatula clone mth2-24i13, complete sequence
          Length = 94953

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    aaaattttgattcatgtacta 53
             |||||||||||||||||||||
Sbjct: 61043 aaaattttgattcatgtacta 61063
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>gb|AC161823.4| Pan troglodytes BAC clone CH251-142M23 from chromosome unknown, complete
              sequence
          Length = 163179

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    tggtgctgctctcacacttga 184
              |||||||||||||||||||||
Sbjct: 120172 tggtgctgctctcacacttga 120192
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 107     cggctacatcaacctgctgga 127
               |||||||||||||||||||||
Sbjct: 3237875 cggctacatcaacctgctgga 3237895
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>gb|AC152951.2| Mus musculus 10 BAC RP23-451J19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 183431

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 288   tacacttttattgttttttga 308
             |||||||||||||||||||||
Sbjct: 31299 tacacttttattgttttttga 31319
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>gb|AC109196.12| Mus musculus chromosome 5, clone RP23-313F5, complete sequence
          Length = 205369

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   agcttcaatatgacctgtaa 356
             ||||||||||||||||||||
Sbjct: 72070 agcttcaatatgacctgtaa 72089
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>gb|AC159317.3| Mus musculus BAC clone RP23-76I20 from chromosome 16, complete sequence
          Length = 224160

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 513    ttttgtgtcctattttacaa 532
              ||||||||||||||||||||
Sbjct: 136212 ttttgtgtcctattttacaa 136193
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>ref|XM_457072.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B02453g)
           partial mRNA
          Length = 186

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 244 cctggctcagtccactctgggagc 267
           ||||||||||||||| ||||||||
Sbjct: 106 cctggctcagtccacactgggagc 129
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>gb|AC140261.3| Mus musculus BAC clone RP23-313M16 from chromosome 16, complete
             sequence
          Length = 78962

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   ttttgtgtcctattttacaa 532
             ||||||||||||||||||||
Sbjct: 51184 ttttgtgtcctattttacaa 51165
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>gb|AC108410.9| Mus musculus chromosome 7, clone RP23-480A17, complete sequence
          Length = 184780

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 283   taaactacacttttattgtttttt 306
             ||||||||| ||||||||||||||
Sbjct: 79683 taaactacaattttattgtttttt 79706
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>gb|AF026214.1| Caenorhabditis elegans cosmid F52H2, complete sequence
          Length = 43908

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   acttttattgttttttgaca 310
             ||||||||||||||||||||
Sbjct: 27485 acttttattgttttttgaca 27504
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>emb|AL353752.6| Human DNA sequence from clone RP11-497K15 on chromosome 9 Contains a
             NADH dehydrogenase (ubiquinone) 1 alpha (MLRQ) (NDUFA4)
             pseudogene, complete sequence
          Length = 177921

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   caatatgacctgtaattatc 361
             ||||||||||||||||||||
Sbjct: 72979 caatatgacctgtaattatc 72998
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>emb|CR405706.7| Zebrafish DNA sequence from clone CH211-233D12 in linkage group 1,
             complete sequence
          Length = 181249

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   tataatgtacacctattcat 412
             ||||||||||||||||||||
Sbjct: 70562 tataatgtacacctattcat 70581
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
              hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    cctggctcagtccactctgggagc 267
              ||||||||||||||| ||||||||
Sbjct: 190476 cctggctcagtccacactgggagc 190499
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>emb|BX936325.9| Zebrafish DNA sequence from clone CH211-74P16 in linkage group 1,
              complete sequence
          Length = 185075

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 393    tataatgtacacctattcat 412
              ||||||||||||||||||||
Sbjct: 177305 tataatgtacacctattcat 177286
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>gb|AC154350.3| Mus musculus BAC clone RP23-225B15 from chromosome 13, complete sequence
          Length = 213847

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     cagttgagttttaatgtttc 86
              ||||||||||||||||||||
Sbjct: 108208 cagttgagttttaatgtttc 108227
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>gb|AC074043.12| Homo sapiens 3 BAC RP11-561O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192322

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    ttttgtgtcctattttacaa 532
              ||||||||||||||||||||
Sbjct: 164725 ttttgtgtcctattttacaa 164744
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>gb|AC103813.2| Homo sapiens chromosome 8, clone CTD-2253H3, complete sequence
          Length = 84129

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   agcagcttgtctctggtaaa 237
             ||||||||||||||||||||
Sbjct: 59385 agcagcttgtctctggtaaa 59366
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>gb|AC026798.5| Homo sapiens chromosome 5 clone CTD-2312P21, complete sequence
          Length = 121309

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    cagttgagttttaatgtttc 86
             ||||||||||||||||||||
Sbjct: 74843 cagttgagttttaatgtttc 74824
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>gb|AC022973.5| Homo sapiens, clone RP11-473O4, complete sequence
          Length = 194367

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   agcagcttgtctctggtaaa 237
             ||||||||||||||||||||
Sbjct: 54395 agcagcttgtctctggtaaa 54376
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 325     tgtttgctcttcagcttcaa 344
               ||||||||||||||||||||
Sbjct: 4878076 tgtttgctcttcagcttcaa 4878095
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>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence
          Length = 171057

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   ccctggctcagtccactctgggag 266
             |||||| |||||||||||||||||
Sbjct: 80745 ccctggatcagtccactctgggag 80768
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>ref|NM_073971.1| Caenorhabditis elegans F53F4.7 (F53F4.7) mRNA, complete cds
          Length = 1083

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   tgtcttcaactcttcatact 23
           ||||||||||||||||||||
Sbjct: 159 tgtcttcaactcttcatact 140
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>gb|AC092141.4| Homo sapiens chromosome 16 clone RP11-478K1, complete sequence
          Length = 98984

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 512   tttttgtgtcctattttaca 531
             ||||||||||||||||||||
Sbjct: 87300 tttttgtgtcctattttaca 87319
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>emb|BX000461.4| Zebrafish DNA sequence from clone DKEY-170E5, complete sequence
          Length = 170304

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    tataatgtacacctattcat 412
              ||||||||||||||||||||
Sbjct: 118914 tataatgtacacctattcat 118933
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>dbj|AB073301.1| Coturnix chinensis mitochondrial DNA, complete genome
          Length = 16687

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 11   aactcttcatactccctcct 30
            ||||||||||||||||||||
Sbjct: 5043 aactcttcatactccctcct 5062
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>emb|Z77663.3|CEF53F4 Caenorhabditis elegans Cosmid F53F4, complete sequence
          Length = 44426

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     tgtcttcaactcttcatact 23
             ||||||||||||||||||||
Sbjct: 29419 tgtcttcaactcttcatact 29438
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>emb|AL353668.20| Human DNA sequence from clone RP11-184B18 on chromosome 8, complete
             sequence
          Length = 177277

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   agcagcttgtctctggtaaa 237
             ||||||||||||||||||||
Sbjct: 74842 agcagcttgtctctggtaaa 74861
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>emb|AL929266.9| Zebrafish DNA sequence from clone CH211-67E16 in linkage group 9,
              complete sequence
          Length = 199104

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    ttcaactgtgtataatgtac 402
              ||||||||||||||||||||
Sbjct: 110493 ttcaactgtgtataatgtac 110512
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>dbj|AP005715.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1181D6, complete
             sequence
          Length = 134425

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   agcagcttgtctctggtaaa 237
             ||||||||||||||||||||
Sbjct: 12832 agcagcttgtctctggtaaa 12851
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>emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on chromosome 4, complete
              sequence
          Length = 229213

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    aagcagcttgtctctggtaa 236
              ||||||||||||||||||||
Sbjct: 211929 aagcagcttgtctctggtaa 211910
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>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence
          Length = 187115

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 243    ccctggctcagtccactctgggag 266
              |||||| |||||||||||||||||
Sbjct: 183504 ccctggatcagtccactctgggag 183527


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,342,927
Number of Sequences: 3902068
Number of extensions: 6342927
Number of successful extensions: 138236
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138033
Number of HSP's gapped (non-prelim): 203
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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