ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25d24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186248.2| Oryza sativa (japonica cultivar-group), mRNA 276 8e-71
2dbj|AK103156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 8e-71
3ref|XM_473453.1| Oryza sativa (japonica cultivar-group), predic... 167 5e-38
4dbj|AK120749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
5dbj|AK101071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
6dbj|AK066109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
8dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
9emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4,... 111 3e-21
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
11gb|BT016977.1| Zea mays clone EK07D2303C05.c mRNA sequence 92 3e-15
12gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-7... 66 1e-07
13gb|AC124970.21| Medicago truncatula clone mth2-7j19, complete se... 66 1e-07
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
15dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
16dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
17gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome... 42 2.1
18gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, co... 42 2.1
19gb|AC161884.5| Mus musculus BAC clone RP23-77K23 from chromosome... 42 2.1
20gb|AC115741.9| Mus musculus chromosome 14, clone RP23-476L2, com... 42 2.1
21emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in... 42 2.1
22gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complet... 42 2.1
23gb|AC111048.8| Mus musculus chromosome 19, clone RP23-355N22, co... 42 2.1
24gb|AC157785.2| Mus musculus chromosome 19, clone RP24-272L14, co... 42 2.1
25gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete s... 42 2.1
26gb|AC016716.6| Homo sapiens BAC clone RP11-312I3 from 2, complet... 42 2.1
27emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, c... 42 2.1
28dbj|AP003038.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 42 2.1
29dbj|AP003715.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.1
30gb|AC168055.3| Mus musculus BAC clone RP24-360I1 from chromosome... 40 8.4
31gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 8.4
32gb|AC150690.7| Bos taurus BAC CH240-151A24 (Children's Hospital... 40 8.4
33gb|AY623111.1| Homo sapiens CDC14 cell division cycle 14 homolog... 40 8.4
34gb|AC140311.2| Mus musculus BAC clone RP23-392M3 from chromosome... 40 8.4
35gb|AC125043.4| Mus musculus BAC clone RP23-342M4 from chromosome... 40 8.4
36gb|AC132337.3| Mus musculus BAC clone RP24-153D21 from chromosom... 40 8.4
37gb|AC124761.4| Mus musculus BAC clone RP23-142G18 from 6, comple... 40 8.4
38gb|AC122884.2| Mus musculus BAC clone RP23-88O13 from 5, complet... 40 8.4
39gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, com... 40 8.4
40gb|AC102647.8| Mus musculus chromosome 10, clone RP23-269A24, co... 40 8.4
41gb|L07143.2| Caenorhabditis elegans cosmid B0523, complete sequence 40 8.4
42gb|AC110557.10| Mus musculus chromosome 5, clone RP23-250P16, co... 40 8.4
43gb|AC124973.8| Mus musculus strain C57BL/6J clone rp23-329l13 ma... 40 8.4
44emb|AL589825.8| Human DNA sequence from clone RP11-12K1 on chrom... 40 8.4
45gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 8.4
46emb|AL391334.16| Human DNA sequence from clone RP11-142F1 on chr... 40 8.4
47emb|AL355388.30| Human DNA sequence from clone RP11-336K24 on ch... 40 8.4
48emb|AL355341.19| Human DNA sequence from clone RP11-146P21 on ch... 40 8.4
49emb|AL355578.4| Human DNA sequence from clone RP11-29P20 on chro... 40 8.4
50emb|AL034423.21|HS1185N5 Human DNA sequence from clone RP5-1185N... 40 8.4
51gb|AC016939.8| Homo sapiens X BAC RP5-1014O16 (Roswell Park Canc... 40 8.4
52emb|BX571859.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 8.4
53emb|AL844142.5| Mouse DNA sequence from clone RP23-355C24 on chr... 40 8.4
54emb|BX537307.6| Zebrafish DNA sequence from clone CH211-227H20 i... 40 8.4
55gb|AC104457.2| Homo sapiens chromosome 1 clone RP5-837M10, compl... 40 8.4
56gb|AC022022.10| Homo sapiens chromosome 10 clone RP11-351O1, com... 40 8.4
57gb|AC098965.2| Homo sapiens chromosome 16 clone RP11-419L9, comp... 40 8.4
58dbj|AK087957.1| Mus musculus 2 days neonate thymus thymic cells ... 40 8.4
59dbj|AK031451.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 8.4
60gb|AC093526.5| Homo sapiens chromosome 16 clone RP11-213K2, comp... 40 8.4
61gb|AC087410.1|AC087410 Homo sapiens chromosome X clone Qc18F9 ma... 40 8.4
62gb|AC007513.40| Homo sapiens 12 BAC RP11-510I5 (Roswell Park Can... 40 8.4
63gb|AC006468.10| Homo sapiens chromosome 17, clone RP5-159F22, co... 40 8.4
64gb|AC009300.2| Homo sapiens BAC clone RP11-52A21 from 2, complet... 40 8.4
65dbj|AB012241.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.4
66gb|AC003019.1|AC003019 Mus musculus Chromosome 4 BAC clone BacB6... 40 8.4
67gb|AC004477.1|AC004477 Homo sapiens chromosome 17, clone HRPC890... 40 8.4
68gb|AC132953.2| Mus musculus BAC clone RP24-202D5 from 1, complet... 40 8.4
69gb|U69568.1|HSU69568 Human Xq28 cosmid U168D11, complete sequence 40 8.4
70gb|AC172751.1| Mus musculus BAC clone RP23-341F9 from chromosome... 40 8.4
71gb|AC161871.5| Mus musculus BAC clone RP24-84N15 from chromosome... 40 8.4
72emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on ch... 40 8.4
73gb|AC008376.6| Homo sapiens chromosome 5 clone CTC-207P7, comple... 40 8.4 
>ref|NM_186248.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3974

 Score =  276 bits (139), Expect = 8e-71
 Identities = 334/400 (83%), Gaps = 1/400 (0%)
 Strand = Plus / Minus

                                                                        
Query: 217  gaaaatgttccgttctccgagaagtaggtgttctgggttccacttccaagaaggttccca 276
            |||||||||||  |||| || ||||| ||| | || |||||||| || || |||||||||
Sbjct: 1551 gaaaatgttccagtctcagaaaagtaagtgctttgtgttccactgcctagcaggttccca 1492

                                                                        
Query: 277  tgtgcctgtgggtttgacagctctattccctgaactggtgtaaaggccaaactagatgtc 336
            || | ||| || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 1491 tgggactggggatttgatagttctattccctgaactggtgtaaaggccaaactagacgtc 1432

                                                                        
Query: 337  agtccagatgttgcaccactgctaccataactcttctccttgaannnnnnnngccacttt 396
            ||||||||||||||||||||||||||||| ||||||||||||||        ||||||||
Sbjct: 1431 agtccagatgttgcaccactgctaccatagctcttctccttgaa-ttttttggccacttt 1373

                                                                        
Query: 397  agcagcaagtttgttctgtgcagctgagacacgtagcctcccattcccggcctgcccaag 456
            ||||||||||||| | || |||||||| ||||||||  ||||  | || ||||| |||||
Sbjct: 1372 agcagcaagtttgctttgcgcagctgatacacgtagtttcccgcttcctgcctgtccaag 1313

                                                                        
Query: 457  catgccataaccttcccccaaaccatcacctaatgggctctcctctggtataccgaattg 516
            ||||||||| ||||||||||| ||||||||||||| ||| || |||||||  || || ||
Sbjct: 1312 catgccatagccttcccccaagccatcacctaatgagctttcttctggtaccccaaactg 1253

                                                                        
Query: 517  cattcagtttgcaagcttcatcatatcgtttaccacatatctttctttcatttttcaaag 576
            ||||| ||| |||||||||||||| ||  |   | ||||||||||||||||||| | |||
Sbjct: 1252 cattcggttcgcaagcttcatcatgtcagtctgcgcatatctttctttcattttccgaag 1193

                                                    
Query: 577  gcggagacaccctctcttctttttaggcttggagtctgga 616
             ||  | |  |||||||||||||||||||  |||||||||
Sbjct: 1192 ccgacggcctcctctcttctttttaggctcagagtctgga 1153
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>dbj|AK103156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121A14, full
            insert sequence
          Length = 3974

 Score =  276 bits (139), Expect = 8e-71
 Identities = 334/400 (83%), Gaps = 1/400 (0%)
 Strand = Plus / Minus

                                                                        
Query: 217  gaaaatgttccgttctccgagaagtaggtgttctgggttccacttccaagaaggttccca 276
            |||||||||||  |||| || ||||| ||| | || |||||||| || || |||||||||
Sbjct: 1551 gaaaatgttccagtctcagaaaagtaagtgctttgtgttccactgcctagcaggttccca 1492

                                                                        
Query: 277  tgtgcctgtgggtttgacagctctattccctgaactggtgtaaaggccaaactagatgtc 336
            || | ||| || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 1491 tgggactggggatttgatagttctattccctgaactggtgtaaaggccaaactagacgtc 1432

                                                                        
Query: 337  agtccagatgttgcaccactgctaccataactcttctccttgaannnnnnnngccacttt 396
            ||||||||||||||||||||||||||||| ||||||||||||||        ||||||||
Sbjct: 1431 agtccagatgttgcaccactgctaccatagctcttctccttgaa-ttttttggccacttt 1373

                                                                        
Query: 397  agcagcaagtttgttctgtgcagctgagacacgtagcctcccattcccggcctgcccaag 456
            ||||||||||||| | || |||||||| ||||||||  ||||  | || ||||| |||||
Sbjct: 1372 agcagcaagtttgctttgcgcagctgatacacgtagtttcccgcttcctgcctgtccaag 1313

                                                                        
Query: 457  catgccataaccttcccccaaaccatcacctaatgggctctcctctggtataccgaattg 516
            ||||||||| ||||||||||| ||||||||||||| ||| || |||||||  || || ||
Sbjct: 1312 catgccatagccttcccccaagccatcacctaatgagctttcttctggtaccccaaactg 1253

                                                                        
Query: 517  cattcagtttgcaagcttcatcatatcgtttaccacatatctttctttcatttttcaaag 576
            ||||| ||| |||||||||||||| ||  |   | ||||||||||||||||||| | |||
Sbjct: 1252 cattcggttcgcaagcttcatcatgtcagtctgcgcatatctttctttcattttccgaag 1193

                                                    
Query: 577  gcggagacaccctctcttctttttaggcttggagtctgga 616
             ||  | |  |||||||||||||||||||  |||||||||
Sbjct: 1192 ccgacggcctcctctcttctttttaggctcagagtctgga 1153
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>ref|XM_473453.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score =  167 bits (84), Expect = 5e-38
 Identities = 126/140 (90%)
 Strand = Plus / Minus

                                                                        
Query: 241  taggtgttctgggttccacttccaagaaggttcccatgtgcctgtgggtttgacagctct 300
            |||||| |||| |||||||||||||| ||||| || || |||||||| ||||||| ||||
Sbjct: 1412 taggtgctctgagttccacttccaagcaggttgccgtgggcctgtggatttgacaactct 1353

                                                                        
Query: 301  attccctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcaccactgcta 360
            || ||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||
Sbjct: 1352 atcccctgaactggtgtaaacgccaaactagaagtcagccccgatgttgcaccactgcta 1293

                                
Query: 361  ccataactcttctccttgaa 380
            ||||| ||||||||||||||
Sbjct: 1292 ccatagctcttctccttgaa 1273



 Score =  151 bits (76), Expect = 3e-33
 Identities = 139/160 (86%)
 Strand = Plus / Minus

                                                                        
Query: 446  gcctgcccaagcatgccataaccttcccccaaaccatcacctaatgggctctcctctggt 505
            ||||| ||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||
Sbjct: 1208 gcctgtccaagcatgccataaccttcccctaaaccatcacccaatgagctctcttctggt 1149

                                                                        
Query: 506  ataccgaattgcattcagtttgcaagcttcatcatatcgtttaccacatatctttctttc 565
            | ||| || ||||||| ||| |||||||||||||||||  ||    ||||||||||||||
Sbjct: 1148 acaccaaactgcattcggttagcaagcttcatcatatcagtttgtgcatatctttctttc 1089

                                                    
Query: 566  atttttcaaaggcggagacaccctctcttctttttaggct 605
            ||||||| ||| ||  ||| ||||||||||||||||||||
Sbjct: 1088 atttttcgaagccgccgaccccctctcttctttttaggct 1049
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>dbj|AK120749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004O13, full
            insert sequence
          Length = 1829

 Score =  167 bits (84), Expect = 5e-38
 Identities = 126/140 (90%)
 Strand = Plus / Minus

                                                                        
Query: 241  taggtgttctgggttccacttccaagaaggttcccatgtgcctgtgggtttgacagctct 300
            |||||| |||| |||||||||||||| ||||| || || |||||||| ||||||| ||||
Sbjct: 1653 taggtgctctgagttccacttccaagcaggttgccgtgggcctgtggatttgacaactct 1594

                                                                        
Query: 301  attccctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcaccactgcta 360
            || ||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||
Sbjct: 1593 atcccctgaactggtgtaaacgccaaactagaagtcagccccgatgttgcaccactgcta 1534

                                
Query: 361  ccataactcttctccttgaa 380
            ||||| ||||||||||||||
Sbjct: 1533 ccatagctcttctccttgaa 1514



 Score =  151 bits (76), Expect = 3e-33
 Identities = 139/160 (86%)
 Strand = Plus / Minus

                                                                        
Query: 446  gcctgcccaagcatgccataaccttcccccaaaccatcacctaatgggctctcctctggt 505
            ||||| ||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||
Sbjct: 1449 gcctgtccaagcatgccataaccttcccctaaaccatcacccaatgagctctcttctggt 1390

                                                                        
Query: 506  ataccgaattgcattcagtttgcaagcttcatcatatcgtttaccacatatctttctttc 565
            | ||| || ||||||| ||| |||||||||||||||||  ||    ||||||||||||||
Sbjct: 1389 acaccaaactgcattcggttagcaagcttcatcatatcagtttgtgcatatctttctttc 1330

                                                    
Query: 566  atttttcaaaggcggagacaccctctcttctttttaggct 605
            ||||||| ||| ||  ||| ||||||||||||||||||||
Sbjct: 1329 atttttcgaagccgccgaccccctctcttctttttaggct 1290
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>dbj|AK101071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024A09, full
            insert sequence
          Length = 1884

 Score =  167 bits (84), Expect = 5e-38
 Identities = 126/140 (90%)
 Strand = Plus / Minus

                                                                        
Query: 241  taggtgttctgggttccacttccaagaaggttcccatgtgcctgtgggtttgacagctct 300
            |||||| |||| |||||||||||||| ||||| || || |||||||| ||||||| ||||
Sbjct: 1646 taggtgctctgagttccacttccaagcaggttgccgtgggcctgtggatttgacaactct 1587

                                                                        
Query: 301  attccctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcaccactgcta 360
            || ||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||
Sbjct: 1586 atcccctgaactggtgtaaacgccaaactagaagtcagccccgatgttgcaccactgcta 1527

                                
Query: 361  ccataactcttctccttgaa 380
            ||||| ||||||||||||||
Sbjct: 1526 ccatagctcttctccttgaa 1507



 Score =  143 bits (72), Expect = 8e-31
 Identities = 139/160 (86%), Gaps = 1/160 (0%)
 Strand = Plus / Minus

                                                                        
Query: 446  gcctgcccaagcatgccataaccttcccccaaaccatcacctaatgggctctcctctggt 505
            ||||| ||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||
Sbjct: 1442 gcctgtccaagcatgccataaccttcccctaaaccatcacc-aatgagctctcttctggt 1384

                                                                        
Query: 506  ataccgaattgcattcagtttgcaagcttcatcatatcgtttaccacatatctttctttc 565
            | ||| || ||||||| ||| |||||||||||||||||  ||    ||||||||||||||
Sbjct: 1383 acaccaaactgcattcggttagcaagcttcatcatatcagtttgtgcatatctttctttc 1324

                                                    
Query: 566  atttttcaaaggcggagacaccctctcttctttttaggct 605
            ||||||| ||| ||  ||| ||||||||||||||||||||
Sbjct: 1323 atttttcgaagccgccgaccccctctcttctttttaggct 1284
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>dbj|AK066109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N06, full
            insert sequence
          Length = 2109

 Score =  167 bits (84), Expect = 5e-38
 Identities = 126/140 (90%)
 Strand = Plus / Minus

                                                                        
Query: 241  taggtgttctgggttccacttccaagaaggttcccatgtgcctgtgggtttgacagctct 300
            |||||| |||| |||||||||||||| ||||| || || |||||||| ||||||| ||||
Sbjct: 1653 taggtgctctgagttccacttccaagcaggttgccgtgggcctgtggatttgacaactct 1594

                                                                        
Query: 301  attccctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcaccactgcta 360
            || ||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||
Sbjct: 1593 atcccctgaactggtgtaaacgccaaactagaagtcagccccgatgttgcaccactgcta 1534

                                
Query: 361  ccataactcttctccttgaa 380
            ||||| ||||||||||||||
Sbjct: 1533 ccatagctcttctccttgaa 1514



 Score =  151 bits (76), Expect = 3e-33
 Identities = 139/160 (86%)
 Strand = Plus / Minus

                                                                        
Query: 446  gcctgcccaagcatgccataaccttcccccaaaccatcacctaatgggctctcctctggt 505
            ||||| ||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||
Sbjct: 1449 gcctgtccaagcatgccataaccttcccctaaaccatcacccaatgagctctcttctggt 1390

                                                                        
Query: 506  ataccgaattgcattcagtttgcaagcttcatcatatcgtttaccacatatctttctttc 565
            | ||| || ||||||| ||| |||||||||||||||||  ||    ||||||||||||||
Sbjct: 1389 acaccaaactgcattcggttagcaagcttcatcatatcagtttgtgcatatctttctttc 1330

                                                    
Query: 566  atttttcaaaggcggagacaccctctcttctttttaggct 605
            ||||||| ||| ||  ||| ||||||||||||||||||||
Sbjct: 1329 atttttcgaagccgccgaccccctctcttctttttaggct 1290
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  135 bits (68), Expect = 2e-28
 Identities = 74/76 (97%)
 Strand = Plus / Minus

                                                                           
Query: 305     cctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcaccactgctaccat 364
               |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2180093 cctgaactggtgtaaaggccaaactagacgtcagtccagatgttgcaccactgctaccat 2180034

                               
Query: 365     aactcttctccttgaa 380
               | ||||||||||||||
Sbjct: 2180033 agctcttctccttgaa 2180018



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                           
Query: 389     gccactttagcagcaagtttgttctgtgcagctgagacacgtagcctcccattcccggcc 448
               ||||||||||||||||||||| | || |||||||| ||||||||  ||||  | || |||
Sbjct: 2179228 gccactttagcagcaagtttgctttgcgcagctgatacacgtagtttcccgcttcctgcc 2179169

                                                          
Query: 449     tgcccaagcatgccataaccttcccccaaaccatcacctaatg 491
               || |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 2179168 tgtccaagcatgccatagccttcccccaagccatcacctaatg 2179126



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                           
Query: 217     gaaaatgttccgttctccgagaagtaggtgttctgggttccacttccaagaaggttccca 276
               |||||||||||  |||| || ||||| ||| | || |||||||| || || |||||||||
Sbjct: 2180958 gaaaatgttccagtctcagaaaagtaagtgctttgtgttccactgcctagcaggttccca 2180899

                                                  
Query: 277     tgtgcctgtgggtttgacagctctattccctgaac 311
               || | ||| || ||||| || ||||||||||||||
Sbjct: 2180898 tgggactggggatttgatagttctattccctgaac 2180864



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 587     cctctcttctttttaggcttggagtctgga 616
               |||||||||||||||||||  |||||||||
Sbjct: 2178748 cctctcttctttttaggctcagagtctgga 2178719



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                        
Query: 484     acctaatgggctctcctctggtataccgaattgcattcagtttgcaagcttcatcat 540
               |||||||| ||| || |||||||  || || ||||||| ||| ||||||||||||||
Sbjct: 2179007 acctaatgagctttcttctggtaccccaaactgcattcggttcgcaagcttcatcat 2178951
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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score =  135 bits (68), Expect = 2e-28
 Identities = 74/76 (97%)
 Strand = Plus / Minus

                                                                         
Query: 305   cctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcaccactgctaccat 364
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 47995 cctgaactggtgtaaaggccaaactagacgtcagtccagatgttgcaccactgctaccat 47936

                             
Query: 365   aactcttctccttgaa 380
             | ||||||||||||||
Sbjct: 47935 agctcttctccttgaa 47920



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                         
Query: 389   gccactttagcagcaagtttgttctgtgcagctgagacacgtagcctcccattcccggcc 448
             ||||||||||||||||||||| | || |||||||| ||||||||  ||||  | || |||
Sbjct: 47130 gccactttagcagcaagtttgctttgcgcagctgatacacgtagtttcccgcttcctgcc 47071

                                                        
Query: 449   tgcccaagcatgccataaccttcccccaaaccatcacctaatg 491
             || |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 47070 tgtccaagcatgccatagccttcccccaagccatcacctaatg 47028



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                         
Query: 217   gaaaatgttccgttctccgagaagtaggtgttctgggttccacttccaagaaggttccca 276
             |||||||||||  |||| || ||||| ||| | || |||||||| || || |||||||||
Sbjct: 48860 gaaaatgttccagtctcagaaaagtaagtgctttgtgttccactgcctagcaggttccca 48801

                                                
Query: 277   tgtgcctgtgggtttgacagctctattccctgaac 311
             || | ||| || ||||| || ||||||||||||||
Sbjct: 48800 tgggactggggatttgatagttctattccctgaac 48766



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 587   cctctcttctttttaggcttggagtctgga 616
             |||||||||||||||||||  |||||||||
Sbjct: 46650 cctctcttctttttaggctcagagtctgga 46621



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 484   acctaatgggctctcctctggtataccgaattgcattcagtttgcaagcttcatcat 540
             |||||||| ||| || |||||||  || || ||||||| ||| ||||||||||||||
Sbjct: 46909 acctaatgagctttcttctggtaccccaaactgcattcggttcgcaagcttcatcat 46853
to top
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
             complete sequence
          Length = 127506

 Score =  111 bits (56), Expect = 3e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                         
Query: 305   cctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcaccactgctaccat 364
             |||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 36845 cctgaactggtgtaaacgccaaactagaagtcagccccgatgttgcaccactgctaccat 36786

                             
Query: 365   aactcttctccttgaa 380
             | ||||||||||||||
Sbjct: 36785 agctcttctccttgaa 36770



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                       
Query: 446   gcctgcccaagcatgccataaccttcccccaaaccatcacct 487
             ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 36470 gcctgtccaagcatgccataaccttcccctaaaccatcacct 36429



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 241   taggtgttctgggttccacttccaagaaggttcccatgtgcctgtgggtttgacagctct 300
             |||||| |||| |||||||||||||| ||||| || || |||||||| ||||||| ||||
Sbjct: 37350 taggtgctctgagttccacttccaagcaggttgccgtgggcctgtggatttgacaactct 37291

                     
Query: 301   attccctg 308
             || |||||
Sbjct: 37290 atcccctg 37283



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 557   ctttctttcatttttcaaaggcggagacaccctctcttctttttaggct 605
             |||||||||||||||| ||| ||  ||| ||||||||||||||||||||
Sbjct: 36069 ctttctttcatttttcgaagccgccgaccccctctcttctttttaggct 36021



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 488   aatgggctctcctctggtataccgaattgcattcagtttgcaagcttcatcatatc 543
             |||| |||||| ||||||| ||| || ||||||| ||| |||||||||||||||||
Sbjct: 36317 aatgagctctcttctggtacaccaaactgcattcggttagcaagcttcatcatatc 36262
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  111 bits (56), Expect = 3e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                            
Query: 305      cctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcaccactgctaccat 364
                |||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 27768177 cctgaactggtgtaaacgccaaactagaagtcagccccgatgttgcaccactgctaccat 27768118

                                
Query: 365      aactcttctccttgaa 380
                | ||||||||||||||
Sbjct: 27768117 agctcttctccttgaa 27768102



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                          
Query: 446      gcctgcccaagcatgccataaccttcccccaaaccatcacct 487
                ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 27767802 gcctgtccaagcatgccataaccttcccctaaaccatcacct 27767761



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                            
Query: 241      taggtgttctgggttccacttccaagaaggttcccatgtgcctgtgggtttgacagctct 300
                |||||| |||| |||||||||||||| ||||| || || |||||||| ||||||| ||||
Sbjct: 27768682 taggtgctctgagttccacttccaagcaggttgccgtgggcctgtggatttgacaactct 27768623

                        
Query: 301      attccctg 308
                || |||||
Sbjct: 27768622 atcccctg 27768615



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 557      ctttctttcatttttcaaaggcggagacaccctctcttctttttaggct 605
                |||||||||||||||| ||| ||  ||| ||||||||||||||||||||
Sbjct: 27767401 ctttctttcatttttcgaagccgccgaccccctctcttctttttaggct 27767353



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 488      aatgggctctcctctggtataccgaattgcattcagtttgcaagcttcatcatatc 543
                |||| |||||| ||||||| ||| || ||||||| ||| |||||||||||||||||
Sbjct: 27767649 aatgagctctcttctggtacaccaaactgcattcggttagcaagcttcatcatatc 27767594
to top
>gb|BT016977.1| Zea mays clone EK07D2303C05.c mRNA sequence
          Length = 442

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                       
Query: 281 cctgtgggtttgacagctctattccctgaactggtgtaaaggccaaactagatgtcagtc 340
           ||||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 364 cctgtggatttgacaactctattccctgaactggtgtaaatgccaaactggatgtcaatc 423

                     
Query: 341 cagatgttgc 350
           | ||||||||
Sbjct: 424 ctgatgttgc 433
to top
>gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-77m9, complete
            sequence
          Length = 116865

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                     
Query: 340  ccagatgttgcaccactgctaccataactcttctccttgaa 380
            |||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 4106 ccagatgtagcaccactgctaccataactcttttccttgaa 4146



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                        
Query: 235  gagaagtaggtgttctgggttccacttccaagaaggttcccatgtgcctgtgggtttgac 294
            |||||||||||| | || |||||||| |||||  |||   |||| |||||||| ||||| 
Sbjct: 1895 gagaagtaggtgctttgagttccactaccaagttggtgtgcatgagcctgtggatttgag 1954

                            
Query: 295  agctctattccctgaa 310
            ||||| || |||||||
Sbjct: 1955 agctcaatcccctgaa 1970
to top
>gb|AC124970.21| Medicago truncatula clone mth2-7j19, complete sequence
          Length = 128254

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                       
Query: 340    ccagatgttgcaccactgctaccataactcttctccttgaa 380
              |||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 128018 ccagatgtagcaccactgctaccataactcttttccttgaa 128058



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                          
Query: 235    gagaagtaggtgttctgggttccacttccaagaaggttcccatgtgcctgtgggtttgac 294
              |||||||||||| | || |||||||| |||||  |||   |||| |||||||| ||||| 
Sbjct: 125807 gagaagtaggtgctttgagttccactaccaagttggtgtgcatgagcctgtggatttgag 125866

                              
Query: 295    agctctattccctgaa 310
              ||||| || |||||||
Sbjct: 125867 agctcaatcccctgaa 125882
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                            
Query: 395      ttagcagcaagtttgttctgtgcagctgagacacgtagcctcccattcccggcctgccca 454
                |||||||||||| || | ||  ||||| ||| ||||||  ||||| | || || || |||
Sbjct: 30418067 ttagcagcaagtctgctttggccagctaagagacgtagtttcccacttcctgcttgtcca 30418126

                                                   
Query: 455      agcatgccataaccttcccccaaaccatcacctaa 489
                |||| ||||||||||| ||| || |||||||||||
Sbjct: 30418127 agcaagccataacctttccctaagccatcacctaa 30418161
to top
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0072H09
          Length = 160541

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                         
Query: 395   ttagcagcaagtttgttctgtgcagctgagacacgtagcctcccattcccggcctgccca 454
             |||||||||||| || | ||  ||||| ||| ||||||  ||||| | || || || |||
Sbjct: 98927 ttagcagcaagtctgctttggccagctaagagacgtagtttcccacttcctgcttgtcca 98986

                                                
Query: 455   agcatgccataaccttcccccaaaccatcacctaa 489
             |||| ||||||||||| ||| || |||||||||||
Sbjct: 98987 agcaagccataacctttccctaagccatcacctaa 99021
to top
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0617A09
          Length = 134804

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                         
Query: 395   ttagcagcaagtttgttctgtgcagctgagacacgtagcctcccattcccggcctgccca 454
             |||||||||||| || | ||  ||||| ||| ||||||  ||||| | || || || |||
Sbjct: 24115 ttagcagcaagtctgctttggccagctaagagacgtagtttcccacttcctgcttgtcca 24174

                                                
Query: 455   agcatgccataaccttcccccaaaccatcacctaa 489
             |||| ||||||||||| ||| || |||||||||||
Sbjct: 24175 agcaagccataacctttccctaagccatcacctaa 24209
to top
>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence
          Length = 176868

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 100   tgtatttacatgtatatattt 120
             |||||||||||||||||||||
Sbjct: 61736 tgtatttacatgtatatattt 61716
to top
>gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, complete sequence
          Length = 168641

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   tgtatttacatgtatatattt 120
             |||||||||||||||||||||
Sbjct: 24928 tgtatttacatgtatatattt 24948
to top
>gb|AC161884.5| Mus musculus BAC clone RP23-77K23 from chromosome 14, complete sequence
          Length = 243730

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 551   acatatctttctttcattttt 571
             |||||||||||||||||||||
Sbjct: 72422 acatatctttctttcattttt 72402
to top
>gb|AC115741.9| Mus musculus chromosome 14, clone RP23-476L2, complete sequence
          Length = 188141

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 551   acatatctttctttcattttt 571
             |||||||||||||||||||||
Sbjct: 50229 acatatctttctttcattttt 50249
to top
>emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 6, complete
              sequence
          Length = 193958

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 97     aactgtatttacatgtatatatttt 121
              |||||||||||| ||||||||||||
Sbjct: 136198 aactgtatttacctgtatatatttt 136222
to top
>gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complete sequence
          Length = 154706

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 550    cacatatctttctttcatttt 570
              |||||||||||||||||||||
Sbjct: 128183 cacatatctttctttcatttt 128163
to top
>gb|AC111048.8| Mus musculus chromosome 19, clone RP23-355N22, complete sequence
          Length = 232012

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 547   taccacatatctttctttcattttt 571
             ||||||||||||||||||| |||||
Sbjct: 53034 taccacatatctttctttctttttt 53010
to top
>gb|AC157785.2| Mus musculus chromosome 19, clone RP24-272L14, complete sequence
          Length = 159030

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 547    taccacatatctttctttcattttt 571
              ||||||||||||||||||| |||||
Sbjct: 113216 taccacatatctttctttctttttt 113192
to top
>gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete sequence
          Length = 191954

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 132    tgtacttattttacaaatcacgtgg 156
              |||| ||||||||||||||||||||
Sbjct: 158371 tgtatttattttacaaatcacgtgg 158395
to top
>gb|AC016716.6| Homo sapiens BAC clone RP11-312I3 from 2, complete sequence
          Length = 214269

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     atgacttcatacattgtgatg 84
              |||||||||||||||||||||
Sbjct: 156783 atgacttcatacattgtgatg 156763
to top
>emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, complete sequence
          Length = 197232

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 97    aactgtatttacatgtatatatttt 121
             |||||||||||| ||||||||||||
Sbjct: 98367 aactgtatttacctgtatatatttt 98343
to top
>dbj|AP003038.3| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2342I9, complete
              sequence
          Length = 181452

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 551    acatatctttctttcattttt 571
              |||||||||||||||||||||
Sbjct: 181085 acatatctttctttcattttt 181065
to top
>dbj|AP003715.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-115E19, complete
             sequence
          Length = 163728

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 551   acatatctttctttcattttt 571
             |||||||||||||||||||||
Sbjct: 59691 acatatctttctttcattttt 59671
to top
>gb|AC168055.3| Mus musculus BAC clone RP24-360I1 from chromosome 10, complete sequence
          Length = 206775

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   gtatttacatgtatatattt 120
             ||||||||||||||||||||
Sbjct: 32713 gtatttacatgtatatattt 32694
to top
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 184     ttcagattctagcctccagg 203
               ||||||||||||||||||||
Sbjct: 1277398 ttcagattctagcctccagg 1277417
to top
>gb|AC150690.7| Bos taurus  BAC CH240-151A24 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 194641

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    cagcaagtttgttctgtgca 418
              ||||||||||||||||||||
Sbjct: 102345 cagcaagtttgttctgtgca 102326
to top
>gb|AY623111.1| Homo sapiens CDC14 cell division cycle 14 homolog A (S. cerevisiae)
             (CDC14A) gene, complete cds
          Length = 170869

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 127   gaaactgtacttattttacaaatc 150
             ||||||||| ||||||||||||||
Sbjct: 37481 gaaactgtatttattttacaaatc 37458
to top
>gb|AC140311.2| Mus musculus BAC clone RP23-392M3 from chromosome 9, complete sequence
          Length = 195460

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tatttacatgtatatatttt 121
             ||||||||||||||||||||
Sbjct: 75591 tatttacatgtatatatttt 75572
to top
>gb|AC125043.4| Mus musculus BAC clone RP23-342M4 from chromosome 5, complete sequence
          Length = 199287

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   cagctgagacacgtagcctc 436
             ||||||||||||||||||||
Sbjct: 72197 cagctgagacacgtagcctc 72216
to top
>gb|AC132337.3| Mus musculus BAC clone RP24-153D21 from chromosome 6, complete sequence
          Length = 146358

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tgtatttacatgtatatatt 119
              ||||||||||||||||||||
Sbjct: 132067 tgtatttacatgtatatatt 132086
to top
>gb|AC124761.4| Mus musculus BAC clone RP23-142G18 from 6, complete sequence
          Length = 182921

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tgtatttacatgtatatatt 119
             ||||||||||||||||||||
Sbjct: 25919 tgtatttacatgtatatatt 25938
to top
>gb|AC122884.2| Mus musculus BAC clone RP23-88O13 from 5, complete sequence
          Length = 160295

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   gaagtaggtgttctgggttc 256
             ||||||||||||||||||||
Sbjct: 65023 gaagtaggtgttctgggttc 65042
to top
>gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, complete sequence
          Length = 267946

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     acttcatacattgtgatgtt 86
              ||||||||||||||||||||
Sbjct: 131220 acttcatacattgtgatgtt 131239
to top
>gb|AC102647.8| Mus musculus chromosome 10, clone RP23-269A24, complete sequence
          Length = 201670

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    gtatttacatgtatatattt 120
              ||||||||||||||||||||
Sbjct: 191990 gtatttacatgtatatattt 191971
to top
>gb|L07143.2| Caenorhabditis elegans cosmid B0523, complete sequence
          Length = 18334

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 174  tccttccattttcagattct 193
            ||||||||||||||||||||
Sbjct: 9178 tccttccattttcagattct 9197
to top
>gb|AC110557.10| Mus musculus chromosome 5, clone RP23-250P16, complete sequence
          Length = 221232

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     acttcatacattgtgatgtt 86
              ||||||||||||||||||||
Sbjct: 187132 acttcatacattgtgatgtt 187151
to top
>gb|AC124973.8| Mus musculus strain C57BL/6J clone rp23-329l13 map 19, complete
             sequence
          Length = 199006

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 556   tctttctttcatttttcaaa 575
             ||||||||||||||||||||
Sbjct: 47912 tctttctttcatttttcaaa 47931
to top
>emb|AL589825.8| Human DNA sequence from clone RP11-12K1 on chromosome 9, complete
             sequence
          Length = 57578

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tatttacatgtatatatttt 121
             ||||||||||||||||||||
Sbjct: 49166 tatttacatgtatatatttt 49147
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 273     cccatgtgcctgtgggtttg 292
               ||||||||||||||||||||
Sbjct: 4194391 cccatgtgcctgtgggtttg 4194410
to top
>emb|AL391334.16| Human DNA sequence from clone RP11-142F1 on chromosome 10, complete
             sequence
          Length = 97430

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 584   caccctctcttctttttagg 603
             ||||||||||||||||||||
Sbjct: 47995 caccctctcttctttttagg 48014
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>emb|AL355388.30| Human DNA sequence from clone RP11-336K24 on chromosome 1 Contains the
             5' end of the RIT1 gene for Ras-like without CAAX 1, the
             gene for a novel protein (KIAA0907), the ARHGEF2 gene for
             rho/rac guanine nucleotide exchange factor (GEF) 2, four
             novel genes, the SSR2 gene for signal sequence receptor
             beta (translocon-associated protein beta), the C1orf6 gene
             for chromosome 1 open reading frame 6, the gene for
             mitogen-activated protein-binding protein-interacting
             protein (MAPBPIP), the RAB25 gene for RAB25 (member RAS
             oncogene family), the 5' end of the LMNA gene for lamin
             A/C and three CpG islands, complete sequence
          Length = 205463

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   cttcccccaaaccatcacct 487
             ||||||||||||||||||||
Sbjct: 71408 cttcccccaaaccatcacct 71389
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>emb|AL355341.19| Human DNA sequence from clone RP11-146P21 on chromosome 10 Contains the
              3'end of the PLCE1 gene for phospholipase C, epsilon 1
              (PLCE, KIAA1516), the gene for AD24 protein (FLJ12820), the
              5'end  of a novel gene (KIAA0608) and a CpG island,
              complete sequence
          Length = 153449

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tttacatgtatatattttgc 123
              ||||||||||||||||||||
Sbjct: 119551 tttacatgtatatattttgc 119570
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>emb|AL355578.4| Human DNA sequence from clone RP11-29P20 on chromosome 13q31.1-31.3
             Contains part of a novel gene and a CpG island, complete
             sequence
          Length = 157949

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   ccacatatctttctttcatt 568
             ||||||||||||||||||||
Sbjct: 76284 ccacatatctttctttcatt 76303
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>emb|AL034423.21|HS1185N5 Human DNA sequence from clone RP5-1185N5 on chromosome 20q13.11-13.2
              Contains the UBE2V1 gene for ubiquitin-conjugating enzyme
              E2 variant 1 and two CpG islands, complete sequence
          Length = 113589

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 584    caccctctcttctttttagg 603
              ||||||||||||||||||||
Sbjct: 104263 caccctctcttctttttagg 104282
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>gb|AC016939.8| Homo sapiens X BAC RP5-1014O16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 118440

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   tctttctttcatttttcaaa 575
             ||||||||||||||||||||
Sbjct: 86943 tctttctttcatttttcaaa 86924
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>emb|BX571859.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              1/17
          Length = 349483

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 398    gcagcaagtttgttctgtgcagct 421
              |||||| |||||||||||||||||
Sbjct: 124310 gcagcaggtttgttctgtgcagct 124287
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>emb|AL844142.5| Mouse DNA sequence from clone RP23-355C24 on chromosome 4, complete
             sequence
          Length = 121550

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   atttacatgtatatattttg 122
             ||||||||||||||||||||
Sbjct: 87231 atttacatgtatatattttg 87250
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>emb|BX537307.6| Zebrafish DNA sequence from clone CH211-227H20 in linkage group 10,
             complete sequence
          Length = 99161

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    aactgtatttacatgtatat 116
             ||||||||||||||||||||
Sbjct: 88850 aactgtatttacatgtatat 88831
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>gb|AC104457.2| Homo sapiens chromosome 1 clone RP5-837M10, complete sequence
          Length = 168505

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 127   gaaactgtacttattttacaaatc 150
             ||||||||| ||||||||||||||
Sbjct: 81182 gaaactgtatttattttacaaatc 81205
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>gb|AC022022.10| Homo sapiens chromosome 10 clone RP11-351O1, complete sequence
          Length = 183604

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   tatttacatgtatatatttt 121
             ||||||||||||||||||||
Sbjct: 45177 tatttacatgtatatatttt 45196
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>gb|AC098965.2| Homo sapiens chromosome 16 clone RP11-419L9, complete sequence
          Length = 191911

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    agcaagtttgttctgtgcag 419
              ||||||||||||||||||||
Sbjct: 174464 agcaagtttgttctgtgcag 174445
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>dbj|AK087957.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430001I07
            product:inferred: DNA segment, Chr 19, Brigham and
            Women's Genetics 1357 expressed, full insert sequence
          Length = 3844

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 556  tctttctttcatttttcaaa 575
            ||||||||||||||||||||
Sbjct: 3298 tctttctttcatttttcaaa 3317
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>dbj|AK031451.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030434H13 product:hypothetical
            Pumilio-family RNA binding domains (aka PUM-HD, Pumilio
            homology domain) containing protein, full insert sequence
          Length = 3057

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 556  tctttctttcatttttcaaa 575
            ||||||||||||||||||||
Sbjct: 2510 tctttctttcatttttcaaa 2529
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>gb|AC093526.5| Homo sapiens chromosome 16 clone RP11-213K2, complete sequence
          Length = 178734

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    agcaagtttgttctgtgcag 419
              ||||||||||||||||||||
Sbjct: 173070 agcaagtttgttctgtgcag 173089
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>gb|AC087410.1|AC087410 Homo sapiens chromosome X clone Qc18F9 map Xq28, complete sequence
          Length = 40438

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 556   tctttctttcatttttcaaa 575
             ||||||||||||||||||||
Sbjct: 20671 tctttctttcatttttcaaa 20690
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>gb|AC007513.40| Homo sapiens 12 BAC RP11-510I5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147118

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 552   catatctttctttcattttt 571
             ||||||||||||||||||||
Sbjct: 82952 catatctttctttcattttt 82971
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>gb|AC006468.10| Homo sapiens chromosome 17, clone RP5-159F22, complete sequence
          Length = 91672

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tatttacatgtatatatttt 121
             ||||||||||||||||||||
Sbjct: 90892 tatttacatgtatatatttt 90873
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>gb|AC009300.2| Homo sapiens BAC clone RP11-52A21 from 2, complete sequence
          Length = 109939

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tatttacatgtatatatttt 121
             ||||||||||||||||||||
Sbjct: 33210 tatttacatgtatatatttt 33191
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>dbj|AB012241.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18L3
          Length = 78239

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tatttacatgtatatatttt 121
             ||||||||||||||||||||
Sbjct: 26174 tatttacatgtatatatttt 26155
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>gb|AC003019.1|AC003019 Mus musculus Chromosome 4 BAC clone BacB6, complete sequence
          Length = 138473

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    atttacatgtatatattttg 122
              ||||||||||||||||||||
Sbjct: 106223 atttacatgtatatattttg 106204
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>gb|AC004477.1|AC004477 Homo sapiens chromosome 17, clone HRPC890E16, complete sequence
          Length = 135505

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    tatttacatgtatatatttt 121
              ||||||||||||||||||||
Sbjct: 134455 tatttacatgtatatatttt 134474
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>gb|AC132953.2| Mus musculus BAC clone RP24-202D5 from 1, complete sequence
          Length = 150428

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    tatttacatgtatatatttt 121
              ||||||||||||||||||||
Sbjct: 114919 tatttacatgtatatatttt 114938
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>gb|U69568.1|HSU69568 Human Xq28 cosmid U168D11, complete sequence
          Length = 43927

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   tctttctttcatttttcaaa 575
             ||||||||||||||||||||
Sbjct: 19075 tctttctttcatttttcaaa 19056
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>gb|AC172751.1| Mus musculus BAC clone RP23-341F9 from chromosome 14, complete sequence
          Length = 200222

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   tctttctttcatttttcaaa 575
             ||||||||||||||||||||
Sbjct: 16331 tctttctttcatttttcaaa 16312
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>gb|AC161871.5| Mus musculus BAC clone RP24-84N15 from chromosome 14, complete sequence
          Length = 204723

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 556    tctttctttcatttttcaaa 575
              ||||||||||||||||||||
Sbjct: 203828 tctttctttcatttttcaaa 203809
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>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete
            sequence
          Length = 248940

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 552  catatctttctttcattttt 571
            ||||||||||||||||||||
Sbjct: 2582 catatctttctttcattttt 2563
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>gb|AC008376.6| Homo sapiens chromosome 5 clone CTC-207P7, complete sequence
          Length = 157221

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   aactgagaatcaggtccttccatt 183
             ||||||||||||||||| ||||||
Sbjct: 71118 aactgagaatcaggtccatccatt 71095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,084,498
Number of Sequences: 3902068
Number of extensions: 6084498
Number of successful extensions: 127482
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127099
Number of HSP's gapped (non-prelim): 382
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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