ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24o22 |
|---|---|
| Clone Library Name | barley_pub |
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 67.8 bits (164), Expect = 7e-12 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFH 75 +RKLE K +E+ ++ +E LQ+EIK+ KA L C C R K+ V+TKCFH Sbjct: 916 RRKLE------KQRKVEVYADADEI----LQEEIKEYKARLTCPCCNTRKKDAVLTKCFH 965 Query: 74 LFCSTCIQRNLELRHRKCPGC 12 +FC C++ E R RKCP C Sbjct: 966 VFCFECVRGRYEARQRKCPKC 986
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 67.8 bits (164), Expect = 7e-12 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFH 75 +RKLE K +E+ ++ +E LQ+EIK+ KA L C C R K+ V+TKCFH Sbjct: 916 RRKLE------KQRKVEVYADADEI----LQEEIKEYKARLTCPCCNTRKKDAVLTKCFH 965 Query: 74 LFCSTCIQRNLELRHRKCPGC 12 +FC C++ E R RKCP C Sbjct: 966 VFCFECVRGRYEARQRKCPKC 986
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 67.8 bits (164), Expect = 7e-12 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFH 75 +RKLE K +E+ ++ +E LQ+EIK+ KA L C C R K+ V+TKCFH Sbjct: 916 RRKLE------KQRKVEVYADADEI----LQEEIKEYKARLTCPCCNTRKKDAVLTKCFH 965 Query: 74 LFCSTCIQRNLELRHRKCPGC 12 +FC C++ E R RKCP C Sbjct: 966 VFCFECVRGRYEARQRKCPKC 986
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 67.8 bits (164), Expect = 7e-12 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFH 75 +RKLE K +E+ ++ +E LQ+EIK+ KA L C C R K+ V+TKCFH Sbjct: 916 RRKLE------KQRKVEVYADADEI----LQEEIKEYKARLTCPCCNTRKKDAVLTKCFH 965 Query: 74 LFCSTCIQRNLELRHRKCPGC 12 +FC C++ E R RKCP C Sbjct: 966 VFCFECVRGRYEARQRKCPKC 986
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 67.8 bits (164), Expect = 7e-12 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFH 75 +RKLE K +E+ ++ +E LQ+EIK+ KA L C C R K+ V+TKCFH Sbjct: 917 RRKLE------KQRKVEVYADADEI----LQEEIKEYKARLTCPCCNTRKKDAVLTKCFH 966 Query: 74 LFCSTCIQRNLELRHRKCPGC 12 +FC C++ E R RKCP C Sbjct: 967 VFCFECVRGRYEARQRKCPKC 987
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 66.6 bits (161), Expect = 2e-11 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATI--QKLQDEIKDCKAILKCGVCFDRPKEVVITKC 81 KR+ EE E+ E N+ A Q LQ+ + K L C C RPK+ ++ KC Sbjct: 732 KRQRAEEELELVRVKYERAKRNDSAQTGDQVLQEANRQMKETLTCPSCKTRPKDCIMLKC 791 Query: 80 FHLFCSTCIQRNLELRHRKCPGCGT 6 +HLFC TCI+ + R RKCP C + Sbjct: 792 YHLFCETCIKTMYDTRQRKCPKCNS 816
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 64.3 bits (155), Expect = 8e-11 Identities = 27/52 (51%), Positives = 34/52 (65%) Frame = -1 Query: 167 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 L +EIKD KA L C C R K+ V+TKCFH+FC C++ + R RKCP C Sbjct: 907 LMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC 958
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 64.3 bits (155), Expect = 8e-11 Identities = 27/52 (51%), Positives = 34/52 (65%) Frame = -1 Query: 167 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 L +EIKD KA L C C R K+ V+TKCFH+FC C++ + R RKCP C Sbjct: 918 LMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC 969
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 64.3 bits (155), Expect = 8e-11 Identities = 27/52 (51%), Positives = 34/52 (65%) Frame = -1 Query: 167 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 L +EIKD KA L C C R K+ V+TKCFH+FC C++ + R RKCP C Sbjct: 909 LMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC 960
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 64.3 bits (155), Expect = 8e-11 Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQK----LQDEIKDCKAILKCGVCFDRPKEVVIT 87 KR+ EE E E NE Q L++ + K L C C RPK+ ++ Sbjct: 739 KRQRAEEELETLRIKYERVKRNESVPAQSGDQVLEEANRQMKETLTCPSCKTRPKDCIML 798 Query: 86 KCFHLFCSTCIQRNLELRHRKCPGCGT 6 KC+HLFC TCI+ + R RKCP C + Sbjct: 799 KCYHLFCETCIKTMYDTRQRKCPKCNS 825
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 63.2 bits (152), Expect = 2e-10 Identities = 26/79 (32%), Positives = 45/79 (56%) Frame = -1 Query: 248 KLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLF 69 KL+++ +N + + + N + +Q+ + +++ ++I KC VC K+ IT C H+F Sbjct: 589 KLQKQLQSTENILQKYKTNNTNSLLQEDEQQLEALRSIAKCSVCSKNWKDTAITVCGHVF 648 Query: 68 CSTCIQRNLELRHRKCPGC 12 CS C Q L R R+CP C Sbjct: 649 CSKCTQERLAARLRRCPSC 667
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 61.2 bits (147), Expect = 7e-10 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Frame = -1 Query: 251 RKLEEEYXEVKNEVMELTS-ENEEATIQKLQ-DEIKDCKAILKCGVCFDRPKEVVITKCF 78 ++L+EE + K + + E TI ++ +EI++ K L C C + K+ V++KCF Sbjct: 948 KRLQEELAQFKRKAERMKKMEMSGTTIDEVMIEEIREYKETLTCPSCKVKRKDAVLSKCF 1007 Query: 77 HLFCSTCIQRNLELRHRKCPGC 12 H+FC C++ E R RKCP C Sbjct: 1008 HVFCYDCLRTRYETRQRKCPKC 1029
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 59.7 bits (143), Expect = 2e-09 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = -1 Query: 215 EVMELTSENEEATIQKLQD--------EIKDCKAILKCGVC-FDRPKEVVITKCFHLFCS 63 +++ E E +KL+D E+K +A+ KC VC F+R K+ +I+ C H FC Sbjct: 590 DILSKQDEEHEKEKRKLKDTGVSTSAEELKTFRAMCKCSVCNFERWKDRIISLCGHGFCY 649 Query: 62 TCIQRNLELRHRKCPGCG 9 CIQ+ +E R R+CP CG Sbjct: 650 QCIQKRIETRQRRCPICG 667
>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 820 Score = 57.4 bits (137), Expect = 1e-08 Identities = 29/81 (35%), Positives = 41/81 (50%) Frame = -1 Query: 251 RKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL 72 +KL+E V S++E A Q+ +K +LKC C K+ VI KC H Sbjct: 730 KKLKERQDAVAAASQTGMSDHEWAITQERDKLLK----LLKCSCCEQNFKQQVIVKCMHT 785 Query: 71 FCSTCIQRNLELRHRKCPGCG 9 FC C+++ + R RKCP CG Sbjct: 786 FCKQCLEQRIASRQRKCPACG 806
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 57.0 bits (136), Expect = 1e-08 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = -1 Query: 248 KLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLF 69 KLE + ++ + + + N + +Q+ + +++ ++I KC VC K+ IT C H+F Sbjct: 599 KLEHKLKSTESLLKKYKTNNTSSILQEDERQLEALRSIAKCSVCSKNWKDTAITVCGHVF 658 Query: 68 CSTCIQRNLELRHRKCPGC 12 C C Q L R R+CP C Sbjct: 659 CLGCTQERLAARLRRCPTC 677
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 55.5 bits (132), Expect = 4e-08 Identities = 24/68 (35%), Positives = 36/68 (52%) Frame = -1 Query: 206 ELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR 27 +LT + E ++ DEI + ++I C +C K+ + C H+FC C Q L+ R R Sbjct: 622 KLTKQIELSSFGGSSDEIDELRSIAMCSLCSKNWKDTALKVCGHVFCHQCAQDRLDARLR 681 Query: 26 KCPGCGTP 3 KCP C P Sbjct: 682 KCPNCNKP 689
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 53.9 bits (128), Expect = 1e-07 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 12/91 (13%) Frame = -1 Query: 248 KLEEEYXEVKNEVMELT-SENEEATIQK-----------LQDEIKDCKAILKCGVCFDRP 105 KL + E KN +LT EN+ + K L +E+++ + ++ C +C Sbjct: 539 KLNDLEIETKNLATKLTYQENKSKKLHKTLVSNGGDNGALAEELENFRTVVYCSLCSKNW 598 Query: 104 KEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 K+ VI C H+FC+ C + L R RKCP C Sbjct: 599 KDTVIKTCGHVFCADCCKERLAARMRKCPTC 629
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 51.6 bits (122), Expect = 5e-07 Identities = 23/82 (28%), Positives = 39/82 (47%) Frame = -1 Query: 248 KLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLF 69 K++ E K++ + T + L +E+++ + I+ C +C K + C H+F Sbjct: 571 KIKVSSAEAKSKKLYKTLLSNGGDNGALAEELENFRTIIYCSLCSKNWKNTALKTCGHVF 630 Query: 68 CSTCIQRNLELRHRKCPGCGTP 3 C C + L R RKCP C P Sbjct: 631 CDVCCKERLAARMRKCPTCNKP 652
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 51.2 bits (121), Expect = 7e-07 Identities = 21/78 (26%), Positives = 42/78 (53%) Frame = -1 Query: 245 LEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFC 66 LE + ++ + + ++N+ ++ + L +E+ + + ++ C +C K + I C H+FC Sbjct: 609 LESKCEKLHDTLFRGNNKNKGSSDEALVEELANFRTLVYCSLCSKNWKNMAIKTCGHVFC 668 Query: 65 STCIQRNLELRHRKCPGC 12 C + L R RKCP C Sbjct: 669 ENCCKERLAARMRKCPTC 686
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 50.8 bits (120), Expect = 9e-07 Identities = 23/80 (28%), Positives = 41/80 (51%) Frame = -1 Query: 242 EEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCS 63 +E Y K + T+ +E++ + +E+++ + ++ C +C K + I C H+FC Sbjct: 607 KENYNMNKPSSLATTNLDEDS----MAEELENFRTLVYCSLCSKNWKNMAIRTCGHVFCE 662 Query: 62 TCIQRNLELRHRKCPGCGTP 3 C + L R RKCP C P Sbjct: 663 DCCKERLAARMRKCPTCNKP 682
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 46.6 bits (109), Expect = 2e-05 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Frame = -1 Query: 242 EEEYXEVKNEVMELTSENEEATIQ---KLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL 72 E+E ++K + +++SE ++ + +E + + ++ C VC K ++ C H+ Sbjct: 614 EQEAEKLKVRLDKVSSERDKWKTKCQSNSTEEEEMLRNLVLCSVCRSNFKNTILKGCGHV 673 Query: 71 FCSTCIQRNLELRHRKCPGC 12 FC+ C+ L R RKCP C Sbjct: 674 FCNECVDNRLANRMRKCPSC 693
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/49 (40%), Positives = 31/49 (63%) Frame = -1 Query: 158 EIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 ++ D ++L+C +C D K V+T C H FCS CI++ L+ + KCP C Sbjct: 22 QLTDLDSLLRCHICKDFLKASVLTPCGHSFCSICIRKYLQ-KESKCPLC 69
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 46.2 bits (108), Expect = 2e-05 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Frame = -1 Query: 203 LTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELR--H 30 + SE + + + KD A +C +C D K+ V++ C HLFC C+ + L+ R + Sbjct: 1 MASETKAPSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNN 60 Query: 29 RKCPGC 12 + CP C Sbjct: 61 QVCPVC 66
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 45.4 bits (106), Expect = 4e-05 Identities = 19/49 (38%), Positives = 30/49 (61%) Frame = -1 Query: 158 EIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 E+ D ++L+C +C D + V+T+C H FCS CI+ L + +CP C Sbjct: 22 ELADLDSLLRCHICKDMLQTPVLTQCGHTFCSLCIREYLN-KESRCPLC 69
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 45.4 bits (106), Expect = 4e-05 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -1 Query: 227 EVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQR 48 E + ++ EL S + + ++ + +L C +C DR K+ + C H FC C++ Sbjct: 10 EAREKMRELMSRPPSSRPADFVNPLEKIEQLLTCPICLDRYKQPKLLPCQHTFCYPCLES 69 Query: 47 NLELRHR--KCPGC 12 + HR KCP C Sbjct: 70 CADTLHRNLKCPEC 83
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 45.4 bits (106), Expect = 4e-05 Identities = 20/48 (41%), Positives = 27/48 (56%) Frame = -1 Query: 155 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +KD L+C +C + +IT C H FCS CIQR L ++CP C Sbjct: 19 LKDVDETLRCHICKEFFTAPMITGCGHTFCSLCIQRYLTNTSQRCPTC 66
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 45.1 bits (105), Expect = 5e-05 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 ++++Q+ + + IL+C +C + KE V TKC H+FC C+ + L R +CP C Sbjct: 8 VEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLC 64
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 45.1 bits (105), Expect = 5e-05 Identities = 19/55 (34%), Positives = 30/55 (54%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +QKL ++D + C +C P ++IT+C H+FC CI + L+ CP C Sbjct: 620 LQKLVAALQDGEDF-DCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLC 673
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 45.1 bits (105), Expect = 5e-05 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 IQ++Q+ + + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 IQEVQNVLHAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>ZEF2_IRV6 (P40629) Zinc finger protein| Length = 145 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 9/93 (9%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFH 75 K+ LE E ++ E+ E+ ++NE+ +++D++ L C +C +++ C H Sbjct: 44 KQNLEVEIIDITPEI-EILNQNEKEKFNQVEDKLTTLSKNLTCIICLTNQVQILTIPCGH 102 Query: 74 L-FCSTC--------IQRNLELRHRKCPGCGTP 3 L C+ C R + + KCP C TP Sbjct: 103 LIMCNPCSLNLNNSVCTRGVNSNYEKCPKCRTP 135
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 44.7 bits (104), Expect = 6e-05 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 44.7 bits (104), Expect = 6e-05 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 44.7 bits (104), Expect = 6e-05 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 44.7 bits (104), Expect = 6e-05 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 44.7 bits (104), Expect = 6e-05 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +CFD +E +TKC H FC CI ++LE +R CP C Sbjct: 136 CPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKC 173
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 44.7 bits (104), Expect = 6e-05 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +CFD +E +TKC H FC CI ++LE +R CP C Sbjct: 138 CPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKC 175
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 44.3 bits (103), Expect = 8e-05 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLC 64
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 44.3 bits (103), Expect = 8e-05 Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Frame = -1 Query: 209 MELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH 30 M+L++++ ++++Q+ + + IL+C +C + KE V TKC H+FC C+ + L + Sbjct: 1 MDLSADH----VEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKK 56 Query: 29 --RKCPGC 12 +CP C Sbjct: 57 GPSQCPLC 64
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 43.9 bits (102), Expect = 1e-04 Identities = 21/70 (30%), Positives = 31/70 (44%) Frame = -1 Query: 221 KNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL 42 KN+ + +SE EE + C +C + K + C HLFC+ C+ + Sbjct: 631 KNKALSNSSEEEEML-----------RTFALCTICRNNFKNTALKTCGHLFCNQCVDDRI 679 Query: 41 ELRHRKCPGC 12 R RKCP C Sbjct: 680 SNRMRKCPTC 689
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 43.5 bits (101), Expect = 1e-04 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 IQ++Q+ + + IL+C +C + KE V T+C H+FC C+ + L + +CP C Sbjct: 8 IQEVQNVLHAMQKILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = -1 Query: 155 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 + ++ L+C VC D VIT C H FCS CI+R L KCP C Sbjct: 21 VSPLESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLS-TEGKCPAC 67
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 42.7 bits (99), Expect = 2e-04 Identities = 24/68 (35%), Positives = 39/68 (57%) Frame = -1 Query: 215 EVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL 36 +V+ ++ +++ + +LQ E+ D +L+C +C D K V+T C H FCS CI+ L Sbjct: 2 DVLTSAADFKKSKVPQLQ-ELDD---LLRCHICKDFLKNPVLTPCGHTFCSLCIRGYLS- 56 Query: 35 RHRKCPGC 12 KCP C Sbjct: 57 NEPKCPLC 64
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = -1 Query: 227 EVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITK-CFHLFCSTCIQ 51 E++ + E+ +++ E + + + L C +C D K+ + TK C H FCS CI Sbjct: 18 ELQRKPQEVITDSTEIAVSP-----RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIV 72 Query: 50 RNLELRHRKCPGC 12 L +++CP C Sbjct: 73 TALRSGNKECPTC 85
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = -1 Query: 155 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 +K + L+C +C + + +IT C H FCS CI+ L H CP C P Sbjct: 20 LKGLDSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLR-EHPMCPACRAP 69
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 L+C VC D VIT C H FCS CI+R L KCP C Sbjct: 28 LRCQVCKDFFDNPVITSCSHTFCSLCIRRCLS-TEGKCPTC 67
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 45 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 86
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 58
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 41.2 bits (95), Expect = 7e-04 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 10/73 (13%) Frame = -1 Query: 200 TSENEEATIQKLQDEIKDCKAI--LKCGVCFDRPKEV---VITKCFHLFCSTCIQRNLEL 36 + E +A IQ+L+ + D K+ L+C +C P ++ + T+C H FC C+ +E Sbjct: 888 SKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEF 947 Query: 35 RHR-----KCPGC 12 ++ KCP C Sbjct: 948 QNSKNLGLKCPNC 960
>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb| protein) Length = 1030 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = -1 Query: 191 NEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 N A +QKLQ +++D K C VC DR K ++ C H C C R E CP C Sbjct: 966 NVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIF-MCGHGTCQLCGDRMSE-----CPIC 1019
>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) Length = 1006 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = -1 Query: 191 NEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 N A +QKLQ +++D K C VC DR K ++ C H C C R E CP C Sbjct: 942 NVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFL-CGHGTCQLCGDRMSE-----CPIC 995
>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2) Length = 1006 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = -1 Query: 191 NEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 N A +QKLQ +++D K C VC DR K ++ C H C C R E CP C Sbjct: 942 NVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFL-CGHGTCQLCGDRMSE-----CPIC 995
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 8/56 (14%) Frame = -1 Query: 155 IKDCKAIL------KCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGC 12 IK K IL +C +C D VIT C H+FC CI + + E H KCP C Sbjct: 742 IKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQCIQNEQPHAKCPLC 797
>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) Length = 1011 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = -1 Query: 191 NEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 N A +QKLQ +++D K C VC DR K ++ C H C C R E CP C Sbjct: 943 NVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIF-MCGHGTCQLCGDRMSE-----CPIC 996
>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) Length = 803 Score = 40.4 bits (93), Expect = 0.001 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 16/84 (19%) Frame = -1 Query: 215 EVMELTSEN-----EEATIQKLQDEI-----------KDCKAILKCGVCFDRPKEVVITK 84 E +LT + E+ QKL DE+ K + C C + + V T+ Sbjct: 689 EAFQLTPQQQRLIREDCQNQKLWDEVLASLVEGPNFLKKLEQSFMCVCCQELVYQPVTTE 748 Query: 83 CFHLFCSTCIQRNLELRHRKCPGC 12 CFH C C+QR+ + + CP C Sbjct: 749 CFHNVCKDCLQRSFKAQVFSCPAC 772
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 40.4 bits (93), Expect = 0.001 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 16/84 (19%) Frame = -1 Query: 215 EVMELTSEN-----EEATIQKLQDEI-----------KDCKAILKCGVCFDRPKEVVITK 84 E +LT + E+ QKL DE+ K + C C + + V T+ Sbjct: 688 EAFQLTPQQQHLIREDCQNQKLWDEVLSHLVEGPNFLKKLEQSFMCVCCQELVYQPVTTE 747 Query: 83 CFHLFCSTCIQRNLELRHRKCPGC 12 CFH C C+QR+ + + CP C Sbjct: 748 CFHNVCKDCLQRSFKAQVFSCPAC 771
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -1 Query: 155 IKDCKAILKCGVCFDRPK-EVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +K +L+CG+CF+ V+I +C H +CS CI++ L + +CP C Sbjct: 16 MKTIDDLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYK-TQCPTC 63
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 40.0 bits (92), Expect = 0.002 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = -1 Query: 206 ELTSENEEATIQKLQDEI--KDCKAILKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLEL 36 EL +EA L+ + + + L C +C D K + TK C H FC+ CI L Sbjct: 23 ELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRS 82 Query: 35 RHRKCPGC 12 +++CP C Sbjct: 83 GNKECPTC 90
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGC 12 +C +C D VIT C H+FC CI + + E H KCP C Sbjct: 759 ECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLC 800
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = -1 Query: 137 ILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +L+C +C D K V+T C H FCS CI+ +L CP C Sbjct: 25 LLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLN-NQPNCPLC 65
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -1 Query: 194 ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPG 15 E +E + K +EI +C +C V+TKC H FCS+C + +++ CP Sbjct: 154 ETQEKEVLKELEEIP-----FRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMKV-STNCPI 207 Query: 14 CG 9 CG Sbjct: 208 CG 209
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 12 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQR--NLELRHRKCPGC 12 +C +C D VIT C H+FC CI + + E H KCP C Sbjct: 753 ECAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLC 794
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 8/71 (11%) Frame = -1 Query: 191 NEEATIQKLQDEIKDCKAILKCGVCFDRP---KEVVITKCFHLFCSTCIQRNLEL----- 36 N+ +K+ + K +C +C P E+V+T C H FC +CI +L+ Sbjct: 795 NDTDVKEKMYNLYGKIKEENECSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKELK 854 Query: 35 RHRKCPGCGTP 3 + + CP C +P Sbjct: 855 KEKLCPNCRSP 865
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 39.3 bits (90), Expect = 0.003 Identities = 17/61 (27%), Positives = 32/61 (52%) Frame = -1 Query: 185 EATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGT 6 E ++++++E ++ + C +C + V+TKC H FC C + + + KC CG Sbjct: 218 EEGVREVEEEDEEEEVPFACLICRQPFTQPVVTKCGHYFCMGCAAKRFQ-KSPKCYACGA 276 Query: 5 P 3 P Sbjct: 277 P 277
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 39.3 bits (90), Expect = 0.003 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Frame = -1 Query: 251 RKLEEEYXEVKNEVMELTSENEEATIQKLQ--DEIKDCKAILKCGVCFDRPKEVVITKCF 78 R ++ + + KN + E+T+ KL D D + C +C + V T C Sbjct: 246 RGIKNQVIKNKNVMKEITNCKNRHLSTKLLAVDYPADFIKSISCQICEHILADPVETTCR 305 Query: 77 HLFCSTCIQRNLELRHRKCPGCGTP 3 HLFC TCI + + CP C P Sbjct: 306 HLFCRTCILSCIRVMGCYCPSCWYP 330
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 39.3 bits (90), Expect = 0.003 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Frame = -1 Query: 260 SXKRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKC 81 S KRK+E+ + K +K+ DE D L C +C KE VI +C Sbjct: 132 SNKRKIEDGDGDQKK--------------RKVDDEEDDFTEDLTCPLCRSLFKEPVILEC 177 Query: 80 FHLFCSTCIQRNLELRHR-KCPGC 12 H FC CI ++ E CP C Sbjct: 178 GHNFCKHCIDKSWESASAFSCPEC 201
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 39.3 bits (90), Expect = 0.003 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH----RKCPGCGTP 3 C +C D KE V T C HLFC C+ R+++ CP C P Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKP 57
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 39.3 bits (90), Expect = 0.003 Identities = 23/86 (26%), Positives = 39/86 (45%) Frame = -1 Query: 260 SXKRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKC 81 S + K + + ++K+ ++ +N + D +K + C VC + V T C Sbjct: 254 SIQWKNMKAFNQMKDSCKKIHLDNNLLVLDYPSDFVKS----VSCLVCEHILSDPVQTSC 309 Query: 80 FHLFCSTCIQRNLELRHRKCPGCGTP 3 HLFC CI + ++L CP C P Sbjct: 310 KHLFCRICILKYIKLMGCYCPSCKYP 335
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 39.3 bits (90), Expect = 0.003 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGC 12 KC +C D P+ + T C H+FC+ CI L +KCP C Sbjct: 205 KCVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCPVC 246
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 38.9 bits (89), Expect = 0.004 Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -1 Query: 155 IKDCKAILKCGVCFDRPK-EVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +K +L+CG+CF+ ++I +C H +CS CI++ L + +CP C Sbjct: 16 MKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYK-TQCPTC 63
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 38.9 bits (89), Expect = 0.004 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = -1 Query: 239 EEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILK----CGVCFDRPKEVVITKCFHL 72 E + KN+ +E T E +E + ++ + +L+ C +C + E V C H Sbjct: 362 EAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAHS 421 Query: 71 FCSTCIQRNLELRHRKCPGC 12 FCS CI ++ R +CP C Sbjct: 422 FCSYCINEWMK-RKIECPIC 440
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = -1 Query: 155 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +K+ ++ +C +C + K VIT C H FCS CI+ L + + CP C Sbjct: 27 LKELDSLQRCYICKEFLKAPVITSCNHTFCSHCIREYL-IVNSHCPLC 73
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 38.5 bits (88), Expect = 0.005 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = -1 Query: 239 EEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILK----CGVCFDRPKEVVITKCFHL 72 E+ + KN+ +E T E ++ + ++ + +L+ C +C + E V C H Sbjct: 365 EKIIQAKNKELEQTKEEKDKVQAQKEEVLSHMNDLLENELQCIICSEYFIEAVTLNCAHS 424 Query: 71 FCSTCIQRNLELRHRKCPGC 12 FCS CI ++ R +CP C Sbjct: 425 FCSFCINEWMK-RKVECPIC 443
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 38.5 bits (88), Expect = 0.005 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 10/82 (12%) Frame = -1 Query: 227 EVKNEVMELTSENEEATIQKLQDEIKDCKAIL--KCGVCFDRPKE---VVITKCFHLFCS 63 E ++EV ++ + I+ ++ + D ++ +C +C P E V+T+C H+FC Sbjct: 862 EEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEHVFCK 921 Query: 62 TCIQ-----RNLELRHRKCPGC 12 C++ + + +KCP C Sbjct: 922 ECLEEYGNFQKEKSLQQKCPNC 943
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 38.5 bits (88), Expect = 0.005 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +C VC D ++T C H FCS CI+R L + KCP C Sbjct: 33 RCHVCKDFYDSPMLTSCNHTFCSLCIRRCLSV-DSKCPLC 71
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 38.5 bits (88), Expect = 0.005 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + C +C + V T C HLFC CI R L++ CP C P Sbjct: 288 ISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYP 331
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 38.1 bits (87), Expect = 0.006 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + C +C + V T C H+FC CI R L++ CP C P Sbjct: 291 ISCQICEHILADPVETSCKHVFCRICILRCLKVMGSSCPSCHYP 334
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 38.1 bits (87), Expect = 0.006 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGT 6 +C +C D V T+C H +CS CI R LR +CP C T Sbjct: 28 RCYICKDLLNAPVRTQCDHTYCSQCI-REFLLRDNRCPLCKT 68
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 37.7 bits (86), Expect = 0.008 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK----CPGCGTP 3 C +C + KE V T C HLFC C+ +++E CP C P Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKP 59
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 37.7 bits (86), Expect = 0.008 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + C +C + V T C H+FC CI R L++ CP C P Sbjct: 291 ISCQICEHILADPVETNCKHVFCRVCILRCLKVMGSYCPSCRYP 334
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 37.7 bits (86), Expect = 0.008 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + + V T+C H+FC +CI +L+ CP C Sbjct: 36 CAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 74
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 37.7 bits (86), Expect = 0.008 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + + V T+C H+FC +CI +L+ CP C Sbjct: 36 CAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 74
>CBLC_MOUSE (Q80XL1) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) Length = 496 Score = 37.4 bits (85), Expect = 0.010 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C +R K+V I C HL CS C+ + + CP C Sbjct: 350 CKICAERDKDVRIEPCGHLLCSCCLAAWQDSDSQTCPFC 388
>RAG1_RABIT (P34088) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1042 Score = 37.4 bits (85), Expect = 0.010 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + C +C + V T C H+FC CI R L++ CP C P Sbjct: 290 ISCQICEHILADPVETSCKHVFCRICILRCLKVMGSYCPSCQYP 333
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 37.4 bits (85), Expect = 0.010 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK-----CPGCGTP 3 C +C + KE V T C HLFC C+ +++E CP C P Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCCPLCRKP 60
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 37.0 bits (84), Expect = 0.013 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -1 Query: 185 EATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGT 6 EA +++LQ+E C VC DR +V C HL C+ C L+L CP C Sbjct: 240 EAQLRRLQEE-------RTCKVCLDRAVSIVFVPCGHLVCAECAP-GLQL----CPICRA 287 Query: 5 P 3 P Sbjct: 288 P 288
>BRAP_MOUSE (Q99MP8) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) Length = 591 Score = 37.0 bits (84), Expect = 0.013 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Frame = -1 Query: 236 EYXEVKNEVMELTSENEEATIQKLQD----EIKDCKAILKCGVCFDRPKE----VVITKC 81 ++ ++++V +L E A + K +D + D + KC VC +R E ++ T C Sbjct: 224 QFNSIEDDVCQLVYV-ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLC 282 Query: 80 FHLFCSTCIQRNLELRHRKCPGCGTP 3 H F S C+QR + C C TP Sbjct: 283 NHSFHSQCLQRWDDTTCPVCRYCQTP 308
>BRAP_HUMAN (Q7Z569) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) (RING finger protein 52) (NY-REN-63 antigen) Length = 592 Score = 37.0 bits (84), Expect = 0.013 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Frame = -1 Query: 236 EYXEVKNEVMELTSENEEATIQKLQD----EIKDCKAILKCGVCFDRPKE----VVITKC 81 ++ ++++V +L E A + K +D + D + KC VC +R E ++ T C Sbjct: 225 QFNSIEDDVCQLVYV-ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLC 283 Query: 80 FHLFCSTCIQRNLELRHRKCPGCGTP 3 H F S C+QR + C C TP Sbjct: 284 NHSFHSQCLQRWDDTTCPVCRYCQTP 309
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 37.0 bits (84), Expect = 0.013 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQR---NLELRHRKCPGC 12 C VC + KE VI +C H FC CI R +LE R CP C Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVC 69
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 37.0 bits (84), Expect = 0.013 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQR---NLELRHRKCPGC 12 C VC + KE VI +C H FC CI R +LE R CP C Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVC 69
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 37.0 bits (84), Expect = 0.013 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQR---NLELRHRKCPGC 12 C VC + KE VI +C H FC CI R +LE R CP C Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVC 69
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 37.0 bits (84), Expect = 0.013 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELR-HRKCPGC 12 K L C VC+D ++ V +C H FC C+ R E++ CP C Sbjct: 16 KEELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVC 60
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 36.6 bits (83), Expect = 0.017 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTC 57 +QKL+ +++D K C VCFDR K +V C H C C Sbjct: 1167 VQKLKQQLQDIKEQTMCPVCFDRIKNMVFL-CGHGTCQMC 1205 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = -1 Query: 164 QDEIKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTCIQR 48 +D K ++ +C VC D ++ V C H+ C TC R Sbjct: 958 EDPPKSSASLDECLVCSDAKRDTVFKPCGHVSCCETCAPR 997
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 36.6 bits (83), Expect = 0.017 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL C++C+ E + CP C Sbjct: 379 CKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFC 417
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 36.6 bits (83), Expect = 0.017 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL C++C+ E + CP C Sbjct: 381 CKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFC 419
>RAD16_YEAST (P31244) DNA repair protein RAD16 (EC 3.6.1.-) (ATP-dependent| helicase RAD16) Length = 790 Score = 36.6 bits (83), Expect = 0.017 Identities = 15/57 (26%), Positives = 31/57 (54%) Frame = -1 Query: 209 MELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLE 39 M +++ + +++L + D ++ C +C D +E + +KC H FC CI+ +E Sbjct: 510 MRQLADHPDLVLKRLNNFPGDDIGVVICQLCNDEAEEPIESKCHHKFCRLCIKEYVE 566
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 36.6 bits (83), Expect = 0.017 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFH 75 KRK+EE E K +E ++ A+ + + L C +C + K+ V+ C H Sbjct: 106 KRKIEEPEPEPKKAKVEEKDASKNASSLGAAGDFAE---ELTCPLCVELFKDPVMVACGH 162 Query: 74 LFCSTCIQRNLELRHR-KCPGC 12 FC +CI + E + CP C Sbjct: 163 NFCRSCIDKAWEGQSSFACPEC 184
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 36.6 bits (83), Expect = 0.017 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -1 Query: 194 ENEEATIQKLQDEIK-DCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 18 + E + + L +++ D + + C VC E V + C HLFC +CI + + CP Sbjct: 287 QKEHLSARLLSEDLPVDFLSSVTCQVCDHLLSEPVQSPCRHLFCRSCIAKYIYSLGPHCP 346 Query: 17 GCGTP 3 C P Sbjct: 347 ACTLP 351
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 36.6 bits (83), Expect = 0.017 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = -1 Query: 206 ELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLE-LRH 30 ++T +N+E+ +++ D+ C VC + + ++ C HL C C+ +++ R Sbjct: 7 DITMKNDESQEEEIPDQFLCC-------VCLELLYKPIVLSCGHLSCFWCVHKSMNGFRE 59 Query: 29 RKCPGCGTP 3 CP C P Sbjct: 60 SHCPICRDP 68 Score = 28.9 bits (63), Expect = 3.6 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Frame = -1 Query: 194 ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-KCP 18 ENE K+ +I K L C C + V+ C H++C C+ E + KC Sbjct: 172 ENELLKDNKVSKQIS--KDDLLCSACKELLVRPVVLNCGHVYCEGCVVDMAEESEKIKCQ 229 Query: 17 GC 12 C Sbjct: 230 EC 231
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 36.2 bits (82), Expect = 0.023 Identities = 20/67 (29%), Positives = 31/67 (46%) Frame = -1 Query: 203 LTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK 24 +TSE E+ + +A+ KC +C + T C H+FC +CI ++ Sbjct: 304 ITSEAEKGNWST--SDSTSTEAVGKCTLCLSTRQHPTATPCGHVFCWSCIMEWCN-EKQE 360 Query: 23 CPGCGTP 3 CP C TP Sbjct: 361 CPLCRTP 367
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 36.2 bits (82), Expect = 0.023 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Frame = -1 Query: 254 KRKLEEEYXEVKN-EVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCF 78 KRKLEE E K +V + + A++ D ++ L C +C + K+ V+ C Sbjct: 107 KRKLEEPEPEPKKAKVEDKDASKTAASLGAAGDFAEE----LTCPLCVELFKDPVMVACG 162 Query: 77 HLFCSTCIQRNLELRHR-KCPGC 12 H FC +CI + E + CP C Sbjct: 163 HNFCRSCIDKVWEGQSSFACPEC 185
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 36.2 bits (82), Expect = 0.023 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELR--HRKCPGC 12 L C VC + KE V T C H FC++C+ ++ +CP C Sbjct: 11 LSCSVCLELFKEPVTTPCGHNFCTSCLDETWVVQGPPYRCPQC 53
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 36.2 bits (82), Expect = 0.023 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 K L C +C +R K + C H FC C+Q + CP C Sbjct: 18 KQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVC 63
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 36.2 bits (82), Expect = 0.023 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 K L C +C +R K + C H FC C+Q + CP C Sbjct: 18 KQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVC 63
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 36.2 bits (82), Expect = 0.023 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC D E I +C H +C CI+ +L + + KCP C Sbjct: 8 CAVCLDFFVEPCIIECGHSYCRFCIESHLNI-NEKCPLC 45
>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) Length = 982 Score = 35.8 bits (81), Expect = 0.030 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL C++C+ E + CP C Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 422
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 35.8 bits (81), Expect = 0.030 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL C++C+ E + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) Length = 982 Score = 35.8 bits (81), Expect = 0.030 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL C++C+ E + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 35.8 bits (81), Expect = 0.030 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL C++C+ E + CP C Sbjct: 386 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 424
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 35.8 bits (81), Expect = 0.030 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Frame = -1 Query: 185 EATIQKLQDEIK-DCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGC 12 +A KLQ + D KC +C DR V + +C H FC C+Q +CP C Sbjct: 83 KAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQ-EWSKNKAECPLC 141 Query: 11 GTP 3 P Sbjct: 142 KQP 144
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 35.8 bits (81), Expect = 0.030 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 7/88 (7%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEEATIQKLQDE------IKDCKAILKCGVCFDRPKEVV 93 + +LEEE E + E M S E Q +DE + + + C +C + Sbjct: 89 EEELEEEEEE-EEEDMSHFSLRLEGGRQDSEDEEERLINLSELTPYILCSICKGYLIDAT 147 Query: 92 -ITKCFHLFCSTCIQRNLELRHRKCPGC 12 IT+C H FC +CI R+ +R CP C Sbjct: 148 TITECLHTFCKSCIVRHFYYSNR-CPKC 174
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 35.8 bits (81), Expect = 0.030 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Frame = -1 Query: 185 EATIQKLQDEIK-DCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGC 12 +A KLQ + D KC +C DR V + +C H FC C+Q +CP C Sbjct: 84 KAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQ-EWSKNKAECPLC 142 Query: 11 GTP 3 P Sbjct: 143 KQP 145
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 35.8 bits (81), Expect = 0.030 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 18 +C +C +E V T C H FC CI +++ KCP Sbjct: 69 ECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal| transduction protein CBL-B-A) (SH3-binding protein CBL-B-A) Length = 918 Score = 35.8 bits (81), Expect = 0.030 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL C++C+ E + CP C Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 422
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 35.8 bits (81), Expect = 0.030 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Frame = -1 Query: 161 DEIKDCKAILK-----CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 DE D + +L+ C +C K ++TKC H FC +C + R+RK P C Sbjct: 237 DEDDDDEELLESIPFACIICKSSYKSPIVTKCGHYFCESCALQ----RYRKNPSC 287
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 35.8 bits (81), Expect = 0.030 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 5/52 (9%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-----KCPGCGTP 3 K + C +C + KE V C H FC CI N E CP C P Sbjct: 10 KEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVP 61
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 35.8 bits (81), Expect = 0.030 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL C++C+ E + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 35.8 bits (81), Expect = 0.030 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 18 +C +C +E V T C H FC CI +++ KCP Sbjct: 69 ECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 35.4 bits (80), Expect = 0.039 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 35.4 bits (80), Expect = 0.039 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 35.4 bits (80), Expect = 0.039 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 35.4 bits (80), Expect = 0.039 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 35.4 bits (80), Expect = 0.039 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRVDLILP-CAHSFCQKCIDKWSD-RHRSCPVC 191
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 35.4 bits (80), Expect = 0.039 Identities = 13/56 (23%), Positives = 32/56 (57%) Frame = -1 Query: 221 KNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCI 54 + +V++++ ++ + ++ E K +C +CF+ P+ ++T C H+FC C+ Sbjct: 176 EQQVLQISDDDFQEETKEAPKEYGAAKDY-RCPICFEPPETALMTLCGHVFCCPCL 230
>MDM2_HUMAN (Q00987) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) (Hdm2) Length = 491 Score = 35.4 bits (80), Expect = 0.039 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = -1 Query: 227 EVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKE--VVITKCFHLF-CSTC 57 +VK E T + EE+ L AI C +C RPK +V K HL C TC Sbjct: 410 DVKEFEREETQDKEESVESSLP-----LNAIEPCVICQGRPKNGCIVHGKTGHLMACFTC 464 Query: 56 IQRNLELRHRKCPGCGTP 3 ++ L+ R++ CP C P Sbjct: 465 AKK-LKKRNKPCPVCRQP 481
>TRIM3_HUMAN (O75382) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) (RING finger protein 97) Length = 744 Score = 35.4 bits (80), Expect = 0.039 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 12 K L C +C DR + + C H FC C+Q + + CP C Sbjct: 17 KQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVC 62
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 35.0 bits (79), Expect = 0.051 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-KCPGC 12 K L C VC+D ++ V +C H FC C+ E++ CP C Sbjct: 16 KEELLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCPVC 60
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 35.0 bits (79), Expect = 0.051 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-KCPGC 12 C VC + + V T+C H+FC +CI +++ ++ CP C Sbjct: 36 CSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYC 75
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 35.0 bits (79), Expect = 0.051 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 9/59 (15%) Frame = -1 Query: 161 DEIKDCKAILKCGVC----FDRPKEVVITKCFHLFCSTCIQRNLELRHRK-----CPGC 12 D +KD L+C +C VV T+C H FC +C+ ++ +++K CP C Sbjct: 825 DALKD----LECSICTCEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSETICPNC 879
>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) Length = 744 Score = 35.0 bits (79), Expect = 0.051 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGC 12 K L C +C DR + + C H FC C+Q + + CP C Sbjct: 17 KQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVC 62
>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING| finger protein HAC1) Length = 744 Score = 35.0 bits (79), Expect = 0.051 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGC 12 K L C +C DR + + C H FC C+Q + + CP C Sbjct: 17 KQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVC 62
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 35.0 bits (79), Expect = 0.051 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK--CPGC 12 L C +C + KE V T C H FC +C+ ++ CP C Sbjct: 11 LSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQC 53
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 34.7 bits (78), Expect = 0.066 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Frame = -1 Query: 119 CFDRPKEVVITKCFHLFCSTCIQRNLELRHRK-----CPGCGTP 3 C + V IT+C H FC C+ +E + K CP C P Sbjct: 865 CIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMP 908
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 34.7 bits (78), Expect = 0.066 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = -1 Query: 200 TSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKC 21 +S E + +D + C +C + V+T+C H FCS+C + ++ KC Sbjct: 240 SSRTRENMLSDPEDSDTEDDIPFACLICRKAFTDPVVTRCAHYFCSSCAIKRF-AKNSKC 298 Query: 20 PGCG 9 CG Sbjct: 299 FACG 302
>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)| (RING finger protein 16) Length = 477 Score = 34.7 bits (78), Expect = 0.066 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 11/65 (16%) Frame = -1 Query: 173 QKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLE-------LRHRK--- 24 +KLQ+E C +C D + V+T C H FC CIQ + E R RK Sbjct: 8 RKLQEEAT-------CSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60 Query: 23 -CPGC 12 CP C Sbjct: 61 PCPEC 65
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 34.7 bits (78), Expect = 0.066 Identities = 21/71 (29%), Positives = 29/71 (40%) Frame = -1 Query: 221 KNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL 42 KN + T+ + + D KD C +C K+ +T C H FC CI +L Sbjct: 20 KNFSTDTTAAGTFLLVPTMSDLDKD----FLCPICMQIIKDAFLTACGHSFCYMCIITHL 75 Query: 41 ELRHRKCPGCG 9 CP CG Sbjct: 76 R-NKSDCPCCG 85
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 34.7 bits (78), Expect = 0.066 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + C +C + ++ V+ H+FCS CI L+ + +CP C P Sbjct: 16 ITCHICLGKVRQPVVCTNNHVFCSICIDLWLK-NNSQCPACRVP 58
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 34.7 bits (78), Expect = 0.066 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 10/62 (16%) Frame = -1 Query: 158 EIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL----------ELRHRKCPGCG 9 E +D + L C +C D ++ V +C H FC C+ RN E RH P Sbjct: 2 EAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAAL 61 Query: 8 TP 3 P Sbjct: 62 RP 63
>MDM2_MOUSE (P23804) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) Length = 489 Score = 34.7 bits (78), Expect = 0.066 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 28/112 (25%) Frame = -1 Query: 254 KRKLEEEYXEVKNEVMELTSENEE---------------ATIQKLQDEIKD--------- 147 K EE E K E L+ E+++ ++++L++E +D Sbjct: 369 KEPCAEEDSEEKAEQTPLSQESDDYSQPSTSSSIVYSSQESVKELKEETQDKDESVESSF 428 Query: 146 -CKAILKCGVCFDRPKE--VVITKCFHLF-CSTCIQRNLELRHRKCPGCGTP 3 AI C +C RPK +V K HL C TC ++ L+ R++ CP C P Sbjct: 429 SLNAIEPCVICQGRPKNGCIVHGKTGHLMSCFTCAKK-LKKRNKPCPVCRQP 479
>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)| Length = 964 Score = 34.3 bits (77), Expect = 0.086 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -1 Query: 164 QDEIKDCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + ++ + +C +C ++ ++ + C L C +CI+R L + +CP C P Sbjct: 3 EQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAP 57
>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37| Length = 961 Score = 34.3 bits (77), Expect = 0.086 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -1 Query: 164 QDEIKDCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + ++ + +C +C ++ ++ + C L C +CI+R L + +CP C P Sbjct: 3 EQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAP 57
>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) (RING finger protein 57) Length = 474 Score = 34.3 bits (77), Expect = 0.086 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + K+V I C HL CS C+ + CP C Sbjct: 351 CKICAESNKDVKIEPCGHLLCSCCLAAWQHSDSQTCPFC 389
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 34.3 bits (77), Expect = 0.086 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = -1 Query: 170 KLQDEIKDCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGCG 9 +L++E ++ ++ C +C + + KC H FC CI R L+++ + CP CG Sbjct: 152 RLREEAEEQEST--CPICLGEIQNAKTLEKCRHSFCEGCITRALQVK-KACPMCG 203
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 34.3 bits (77), Expect = 0.086 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + C +C + ++ VI H+FCS CI L+ + +CP C P Sbjct: 16 ITCHICLGKVRQPVICINNHVFCSICIDLWLK-NNSQCPACRVP 58
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 34.3 bits (77), Expect = 0.086 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 + C +C + ++ VI H+FCS CI L+ + +CP C P Sbjct: 16 ITCHICLGKVRQPVICINNHVFCSICIDLWLK-NNSQCPACRVP 58
>RNF26_HUMAN (Q9BY78) RING finger protein 26| Length = 433 Score = 34.3 bits (77), Expect = 0.086 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = -1 Query: 155 IKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTC--IQRNLELRHRKCPGC 12 +K+ + KC +C D+ K V++ C HL C C I + HR CP C Sbjct: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLC 421
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 34.3 bits (77), Expect = 0.086 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -1 Query: 164 QDEIKDCKAI-LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCG 9 Q E +D +I +C +C + V T+C H FC C R + R+C CG Sbjct: 145 QTEARDLDSIPFRCVLCRGHYRAPVRTRCGHYFCGGCFARRVR-ETRQCAVCG 196
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 34.3 bits (77), Expect = 0.086 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = -1 Query: 254 KRKLEE-EYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCF 78 +R+LEE Y ++E E+ SE EE +C +C + V+TKC Sbjct: 227 ERELEEGRYCICEDENHEVGSEEEEIPF--------------RCFICRQAFQNPVVTKCR 272 Query: 77 HLFCSTCIQRNLELRHRKCPGCGTP 3 H FC +C + R C C P Sbjct: 273 HYFCESCALEHFRATPR-CYICDQP 296
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 34.3 bits (77), Expect = 0.086 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 K KC +C + K V+T C H FC +C ++++ + KC C Sbjct: 194 KIPFKCTLCKEDYKSPVVTNCGHYFCGSCFAKDMK-KGTKCFIC 236
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 33.9 bits (76), Expect = 0.11 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = -1 Query: 254 KRKLEE-EYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCF 78 +R+L+E Y ++E E+ S++EE KC +C + V+TKC Sbjct: 233 ERELDEGRYGVYEDENYEVGSDDEEIPF--------------KCFICRQSFQNPVVTKCR 278 Query: 77 HLFCSTCIQRNLELRHRKCPGC 12 H FC +C ++ R P C Sbjct: 279 HYFCESCALQHF----RTTPRC 296
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 33.9 bits (76), Expect = 0.11 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%) Frame = -1 Query: 134 LKCGVCFDRPKEVV-------ITKCFHLFCSTCIQRNLELRHRKCPGC 12 + C +C D E+V T+C H+FCS C++ +L+ CP C Sbjct: 134 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-NANTCPTC 180
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 33.9 bits (76), Expect = 0.11 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%) Frame = -1 Query: 134 LKCGVCFDRPKEVV-------ITKCFHLFCSTCIQRNLELRHRKCPGC 12 + C +C D E+V T+C H+FCS C++ +L+ CP C Sbjct: 134 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-NANTCPTC 180
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 33.9 bits (76), Expect = 0.11 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -1 Query: 185 EATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL--RHRKCPGC 12 + T+ +LQD+ L+C +C + KE ++ +C H +C C+ E +CP C Sbjct: 4 QLTVPELQDQ-------LQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVC 56
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 33.9 bits (76), Expect = 0.11 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + + ++TKC H FC+ C ++ + + KCP C Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGCALKSFQ-KSSKCPIC 278
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)| Length = 347 Score = 33.9 bits (76), Expect = 0.11 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -1 Query: 128 CGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGCG 9 C +C + + KC H FC CI R L+++ + CP CG Sbjct: 164 CPICLGEIQNAKTLEKCRHSFCEGCITRALQVK-KACPMCG 203
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 33.9 bits (76), Expect = 0.11 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Frame = -1 Query: 242 EEEYXEVKNEVMELTS-----ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVV-ITKC 81 EEE E+ + + L S E+EE + L + + C +C + IT+C Sbjct: 96 EEEEEEMSHFSLRLESGRADSEDEEERLINLVE----LTPYILCSICKGYLIDATTITEC 151 Query: 80 FHLFCSTCIQRNLELRHRKCPGC 12 H FC +CI R+ +R CP C Sbjct: 152 LHTFCKSCIVRHFYYSNR-CPKC 173
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 33.9 bits (76), Expect = 0.11 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%) Frame = -1 Query: 134 LKCGVCFDRPKEVV-------ITKCFHLFCSTCIQRNLELRHRKCPGC 12 + C +C D E+V T+C H+FCS C++ +L+ CP C Sbjct: 130 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-NANTCPTC 176
>MDM2_HORSE (P56951) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) (Edm2) Length = 491 Score = 33.9 bits (76), Expect = 0.11 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = -1 Query: 227 EVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKE--VVITKCFHLF-CSTC 57 +VK E T + EE+ + AI C +C RPK +V K HL C TC Sbjct: 410 DVKEFEREETQDKEES-----MESSFPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTC 464 Query: 56 IQRNLELRHRKCPGCGTP 3 ++ L+ R++ CP C P Sbjct: 465 AKK-LKKRNKPCPVCRQP 481
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 33.9 bits (76), Expect = 0.11 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Frame = -1 Query: 242 EEEYXEVKNEVMELTS-----ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVV-ITKC 81 EEE E+ + + L S E+EE + L + + C +C + IT+C Sbjct: 98 EEEEEEMSHFSLRLESGRADSEDEEERLINLVE----LTPYILCSICKGYLIDATTITEC 153 Query: 80 FHLFCSTCIQRNLELRHRKCPGC 12 H FC +CI R+ +R CP C Sbjct: 154 LHTFCKSCIVRHFYYSNR-CPKC 175
>MDM2_CANFA (P56950) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) (Cdm2) Length = 487 Score = 33.5 bits (75), Expect = 0.15 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = -1 Query: 227 EVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKE--VVITKCFHLF-CSTC 57 +VK E T + EE + + AI C +C RPK +V K HL C TC Sbjct: 406 DVKEFEREETQDKEE-----IVESSFPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTC 460 Query: 56 IQRNLELRHRKCPGCGTP 3 ++ L+ R++ CP C P Sbjct: 461 AKK-LKKRNKPCPVCRQP 477
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 33.5 bits (75), Expect = 0.15 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Frame = -1 Query: 254 KRKLEE-EYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCF 78 +R+L+E Y ++E E+ S+ EE KC +C + V+TKC Sbjct: 233 ERELDEGRYGVYEDENYEVGSDEEEIPF--------------KCFICRQTFQNPVVTKCR 278 Query: 77 HLFCSTCIQRNLELRHRKCPGC 12 H FC +C ++ R P C Sbjct: 279 HYFCESCALQHF----RTTPRC 296
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 33.5 bits (75), Expect = 0.15 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -1 Query: 182 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 9 A ++ L++E+ C +C D ++ V C H+FC +C R + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCK 57 Query: 8 TP 3 P Sbjct: 58 KP 59
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 31 CPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 69
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 33.5 bits (75), Expect = 0.15 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 2/80 (2%) Frame = -1 Query: 251 RKLEEEYXEVKNEVMELTSENEEAT--IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCF 78 R L E L E EE + Q +K C C +C K+ VIT C Sbjct: 17 RSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLC-----CQLCCSVFKDPVITTCG 71 Query: 77 HLFCSTCIQRNLELRHRKCP 18 H FC C L+ KCP Sbjct: 72 HTFCRRC-----ALKSEKCP 86
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 33.5 bits (75), Expect = 0.15 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 2/80 (2%) Frame = -1 Query: 251 RKLEEEYXEVKNEVMELTSENEEAT--IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCF 78 R L E L E EE + Q +K C C +C K+ VIT C Sbjct: 93 RSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLC-----CQLCCSVFKDPVITTCG 147 Query: 77 HLFCSTCIQRNLELRHRKCP 18 H FC C L+ KCP Sbjct: 148 HTFCRRC-----ALKSEKCP 162
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1734 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -3 Query: 81 LPPVLLNLYPEEPRATPPEVPGLRH 7 +P +L NL PEE + PP VPGL H Sbjct: 1626 VPNLLKNLSPEEEKPQPPSVPGLTH 1650
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 29 CPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 67
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 29 CPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 67
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 29 CPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 67
>TRI10_PIG (O19085) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 482 Score = 33.5 bits (75), Expect = 0.15 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Frame = -1 Query: 182 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL------RHRKC 21 A++ L DE+ C +C +E V C H FC C+ R LE+ C Sbjct: 5 ASVSSLADEVN-------CPICQGTLREPVTIDCGHNFCCVCLTRYLEIPCLDPGELPTC 57 Query: 20 PGCGTP 3 P C P Sbjct: 58 PLCKEP 63
>IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)| Length = 286 Score = 33.5 bits (75), Expect = 0.15 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = -1 Query: 167 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 L + D + +C VC +R ++ V+ C H FC C+Q L +KCP C Sbjct: 225 LNENADDIEEKYECKVCLERQRDAVLMPCRH-FC-VCVQCYFGL-DQKCPTC 273
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 33.5 bits (75), Expect = 0.15 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -1 Query: 182 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 9 A ++ L++E+ C +C D ++ V C H+FC +C R + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCK 57 Query: 8 TP 3 P Sbjct: 58 KP 59
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 33.1 bits (74), Expect = 0.19 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 30 CPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 68
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 33.1 bits (74), Expect = 0.19 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 30 CPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 68
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 33.1 bits (74), Expect = 0.19 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLE 39 C +C D + V+T C H FC CIQ + E Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWE 45
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 33.1 bits (74), Expect = 0.19 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLE 39 C +C D + V+T C H FC CIQ + E Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWE 45
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 33.1 bits (74), Expect = 0.19 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Frame = -1 Query: 131 KCGVCFDRP---KEVVITKCFHLFCSTCIQRNLELRHRK-----CPGCGTP 3 +C +C P E+ +T C H +C C+ + + + + CP C P Sbjct: 915 ECSICTQSPIPLGEMALTPCGHAYCLNCVLEHFDFQEKNLQKPLCPNCREP 965
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 33.1 bits (74), Expect = 0.19 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 18 L+C +C +E + T C H+FC++C+ +R R+CP Sbjct: 16 LECKLCGQVLEEPLCTPCGHVFCASCL-LPWAVRRRRCP 53
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 33.1 bits (74), Expect = 0.19 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 8/77 (10%) Frame = -1 Query: 209 MELTSENEEATIQKLQDEIKDCKA-------ILKCGVCFDRPKEVV-ITKCFHLFCSTCI 54 ++L + Q +++KD L C +C D + V + C H FC+ C Sbjct: 269 LQLLVSGQRGNAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACY 328 Query: 53 QRNLELRHRKCPGCGTP 3 +E R CP C P Sbjct: 329 SGWME-RSSLCPTCRCP 344
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 33.1 bits (74), Expect = 0.19 Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 260 SXKRKLEEEYXEVKNEVMELTSEN--EEATIQKLQDEIKDCKAILKCGVCFDRPKEVVIT 87 S KL + + K+ +E ++ EA +Q++ +E++ + +C +C + ++ V+T Sbjct: 749 SDLNKLSKRFLSGKSSGLEREGKDVPSEAFVQEVVEELRKGEQG-ECPICLEALEDAVLT 807 Query: 86 KCFHLFCSTCI 54 C H C C+ Sbjct: 808 PCAHRLCRECL 818
>TRIM7_MOUSE (Q923T7) Tripartite motif protein 7 (Glycogenin-interacting| protein) Length = 510 Score = 33.1 bits (74), Expect = 0.19 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGT 6 C +C + +E V +C H FC CI R E PG GT Sbjct: 29 CSICLEFFREPVSVECGHSFCRACIMRCWER-----PGAGT 64
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 33.1 bits (74), Expect = 0.19 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C + ++TKC H FC +C + R+RK P C Sbjct: 241 CIICKKPYQNPIVTKCGHYFCESCALQ----RYRKNPSC 275
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 32.7 bits (73), Expect = 0.25 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 92 ITKCFHLFCSTCIQRNLELRHRKCPGC 12 I +C H FC TCI R LE ++ CP C Sbjct: 31 IVECLHSFCKTCIVRYLE-TNKYCPMC 56
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 32.7 bits (73), Expect = 0.25 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%) Frame = -1 Query: 209 MELTSENEEATIQKLQDEIK------DCKAILKCGVCFDR-PKEVVITKCFHLFCSTCIQ 51 M++ S++ +A L+ + D K C +C D + V+ KC H FC+ CI Sbjct: 528 MDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCIN 587 Query: 50 RNLELRHRKCPGCGT 6 + + + CP C T Sbjct: 588 KAMSYK-PICPTCQT 601
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 32.7 bits (73), Expect = 0.25 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 92 ITKCFHLFCSTCIQRNLELRHRKCPGC 12 I +C H FC TCI R LE ++ CP C Sbjct: 31 IVECLHSFCKTCIVRYLE-TNKYCPMC 56
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 32.7 bits (73), Expect = 0.25 Identities = 16/62 (25%), Positives = 27/62 (43%) Frame = -1 Query: 197 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 18 S + +++K+ +E+ C +C D E + +C H FC CI + CP Sbjct: 4 STTSKMSLEKMWEEVT-------CSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCP 56 Query: 17 GC 12 C Sbjct: 57 EC 58
>TRC8_DROME (Q7KRW1) Protein TRC8 homolog| Length = 809 Score = 32.7 bits (73), Expect = 0.25 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C +C+ IT+C H F C+++ L ++ R CP C Sbjct: 621 CAICYQEMYSAKITRCRHFFHGVCLRKWLYVQDR-CPLC 658
>MDM2_FELCA (Q7YRZ8) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) Length = 491 Score = 32.7 bits (73), Expect = 0.25 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -1 Query: 227 EVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKE--VVITKCFHLF-CSTC 57 +VK E T + EE AI C +C RPK +V K HL C TC Sbjct: 410 DVKEFEREETQDKEEIVEPSFPHN-----AIEPCVICQGRPKNGCIVHGKTGHLMACFTC 464 Query: 56 IQRNLELRHRKCPGCGTP 3 ++ L+ R++ CP C P Sbjct: 465 AKK-LKKRNKPCPVCRQP 481
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 32.7 bits (73), Expect = 0.25 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -1 Query: 182 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 9 A ++ L++E+ C +C D ++ V C H+FC +C R + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCK 57 Query: 8 TP 3 P Sbjct: 58 KP 59
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 32.7 bits (73), Expect = 0.25 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -1 Query: 182 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 9 A ++ L++E+ C +C D ++ V C H+FC +C R + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCK 57 Query: 8 TP 3 P Sbjct: 58 KP 59
>ATL4I_ARATH (O49691) Putative RING-H2 finger protein ATL4I| Length = 289 Score = 32.7 bits (73), Expect = 0.25 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = -1 Query: 158 EIKDCKAILKCGVC---FDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGC 12 ++++ K L+C +C FD + ++T C+H+F CI E HR CP C Sbjct: 100 DLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFE-SHRTCPVC 151
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 32.3 bits (72), Expect = 0.33 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = -1 Query: 128 CGVCFDR---PKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 C VC D P C H FC C++ + LR+ CP C TP Sbjct: 126 CAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWIPLRN-TCPLCNTP 169
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (TRAFAMN) Length = 567 Score = 32.3 bits (72), Expect = 0.33 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = -1 Query: 188 EEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +E ++ ++D+ K C+ KC + PK+ T+C H FC +C+ L KC C Sbjct: 39 KEKFVKTVEDKYK-CE---KCRLVLCNPKQ---TECGHRFCESCMAALLSSSSPKCTAC 90
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQR 48 C +C D + V+T C H FC CI+R Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRR 42
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 32.3 bits (72), Expect = 0.33 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -1 Query: 164 QDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTC---IQRNLELRHRKCPGC 12 Q + + + L+C VC + KE ++ +C H +C C + R+L+ R CP C Sbjct: 4 QVSVPELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELR-CPVC 56
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQR 48 C +C D + V+T C H FC CI+R Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRR 42
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 32.3 bits (72), Expect = 0.33 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 L C +C K+ +T C H FC CI +L CP C Sbjct: 50 LLCPICMQIIKDAFLTACGHSFCYMCIITHLR-NKSDCPCC 89
>RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein RIFF)| (Phafin-1) Length = 376 Score = 32.0 bits (71), Expect = 0.43 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Frame = -1 Query: 236 EYXEVKNEVMELTSENEE-----ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL 72 E E+ +V L ENEE +LQDE D C +C D + V+ +C H+ Sbjct: 292 EKWELVEKVNRLYKENEENQKSYGERMQLQDEEDDSL----CRICMDAVIDCVLLECGHM 347 Query: 71 F-CSTCIQRNLELRHRKCPGC 12 C+ C +R E CP C Sbjct: 348 VTCTKCGKRMSE-----CPIC 363
>TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (LMP1-associated protein) (LAP1) (CAP-1) Length = 568 Score = 32.0 bits (71), Expect = 0.43 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = -1 Query: 188 EEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 +E ++ ++D+ K C+ KC + PK+ T+C H FC +C+ L KC C Sbjct: 40 KEKFVKTVEDKYK-CE---KCHLVLCSPKQ---TECGHRFCESCMAALLSSSSPKCTAC 91
>YWZ6_CAEEL (Q11096) Hypothetical RING finger protein C02B8.6 in chromosome X| Length = 347 Score = 32.0 bits (71), Expect = 0.43 Identities = 13/42 (30%), Positives = 19/42 (45%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 C +C + P V C H FC CI+ +++ C C P Sbjct: 5 CTICHNTPNRPVRLDCNHEFCYICIKGSIQNDMLNCAVCRRP 46
>CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24| Length = 232 Score = 32.0 bits (71), Expect = 0.43 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = -1 Query: 236 EYXEVKNEVME---LTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFC 66 ++ +++E+ + + E E T Q+ D+ K+ + +C +C V T+C HLFC Sbjct: 134 KFLHIRDELKQRKPIEKEWETVTEQQKPDKSKE-QVPYRCVLCSKDYTLPVKTECNHLFC 192 Query: 65 STC-IQRNLELRHRKCPGCG 9 C + R L+ C CG Sbjct: 193 QKCFMNRYRNLKKPNCFICG 212
>BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (MIAP2) (MIAP-2) Length = 612 Score = 32.0 bits (71), Expect = 0.43 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 188 EEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGC 12 E+ + L+++++ + C VC DR +V C HL C C RKCP C Sbjct: 545 EDVSGLSLEEQLRRLQEERTCKVCMDREVSIVFIPCGHLVVCQECAP-----SLRKCPIC 599
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 32.0 bits (71), Expect = 0.43 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Frame = -1 Query: 182 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL------RHRKC 21 A++ L DE+ C +C +E V C H FC C+ R E+ C Sbjct: 5 ASVTSLADEVN-------CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTC 57 Query: 20 PGCGTP 3 P C P Sbjct: 58 PLCKEP 63
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 32.0 bits (71), Expect = 0.43 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Frame = -1 Query: 182 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL------RHRKC 21 A++ L DE+ C +C +E V C H FC C+ R E+ C Sbjct: 5 ASVTSLADEVN-------CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTC 57 Query: 20 PGCGTP 3 P C P Sbjct: 58 PLCKEP 63
>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain| associated with RING and Traf domains protein 1) (Malignant 62) (RING finger protein 83) Length = 470 Score = 32.0 bits (71), Expect = 0.43 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -1 Query: 143 KAILKCGVCFDRPKEVV-ITKCFHLFCSTCIQRNLELRHRKCP 18 K L C +C +E V ++ C H FC TC+Q L KCP Sbjct: 13 KRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCP 55
>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)| Length = 381 Score = 32.0 bits (71), Expect = 0.43 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Frame = -1 Query: 236 EYXEVKNEVMELTSENEE-----ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL 72 E E+ +V L ENEE +LQDE D C +C D + V+ +C H+ Sbjct: 297 EKWELVEKVNRLYKENEENQKSYGERMQLQDEEDDSL----CRICMDAVIDCVLLECGHM 352 Query: 71 F-CSTCIQRNLELRHRKCPGC 12 C+ C +R E CP C Sbjct: 353 VTCTKCGKRMSE-----CPIC 368
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1057 Score = 32.0 bits (71), Expect = 0.43 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 C VC + V + C HLFC CI R CP C Sbjct: 296 CQVCDHLLSDPVQSPCRHLFCRLCIIRYTHALGPNCPTC 334
>NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) (m-neu1)| Length = 574 Score = 32.0 bits (71), Expect = 0.43 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGCGTP 3 +C +C++ + VI C H+ C +C R + H CP C P Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHACCPICRRP 563
>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)| Length = 1321 Score = 32.0 bits (71), Expect = 0.43 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 4/84 (4%) Frame = -3 Query: 240 GRIXGGEE*SHGADLGERRGYYPKAPGRDKRLQGYSQVR----CVL*PTERGCDHQMLPP 73 G I G S ++LG GY P PG R G + + + PT Q+L P Sbjct: 629 GDIEIGSHKSSSSNLGADDGYMPMTPGAALRSGGPNSCKSDDYMPMSPTSVSAPKQILQP 688 Query: 72 VLLNLYPEEPRATPPEVPGLRHTF 1 L P A P G+ TF Sbjct: 689 RLAAALPPSGAAVPAPPSGVGRTF 712
>IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)| Length = 249 Score = 32.0 bits (71), Expect = 0.43 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -1 Query: 137 ILKCGVCFDRPKEVVITKCFHL-FCSTCIQR 48 + +C VCFDR K V C HL C+ C +R Sbjct: 199 VSECKVCFDREKSVCFMPCRHLAVCTECSRR 229
>BARD1_MOUSE (O70445) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 765 Score = 32.0 bits (71), Expect = 0.43 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -1 Query: 137 ILKCGVCFDRPKE-VVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 +L+C C + KE V + C H+FCS CI + CP C TP Sbjct: 41 LLRCSRCANILKEPVCLGGCEHIFCSGCIS---DCVGSGCPVCYTP 83
>PML_MOUSE (Q60953) Probable transcription factor PML| Length = 808 Score = 31.6 bits (70), Expect = 0.56 Identities = 20/68 (29%), Positives = 29/68 (42%) Frame = -1 Query: 206 ELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR 27 E SE+ E + + I++ L+C C + K + C H CS C LE Sbjct: 5 EEPSEDYEHSQSPAEQAIQEEFQFLRCPSCQAQAKCPKLLPCLHTLCSGC----LEAPGL 60 Query: 26 KCPGCGTP 3 +CP C P Sbjct: 61 QCPICKAP 68
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 31.6 bits (70), Expect = 0.56 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -1 Query: 176 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQR--NLELRHRKCPGCGT 6 + KLQ+E+ C +C D ++ V C H FC CI + KCP C T Sbjct: 7 VNKLQEEVI-------CPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKT 58
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 31.6 bits (70), Expect = 0.56 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -1 Query: 179 TIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCI 54 T+ +LQD+ L+C +C + KE ++ +C H +C C+ Sbjct: 6 TVPELQDQ-------LQCPICLEVFKEPLMLQCGHSYCKDCL 40
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 31.6 bits (70), Expect = 0.56 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Frame = -1 Query: 236 EYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTC 57 E + N++ + EN + + L DE +C +C + + C HLFC TC Sbjct: 220 EQEKFNNKLKKEKKENNGGSDRNL-DENSLFHPTFQCSICLENKNPSALF-CGHLFCWTC 277 Query: 56 IQR-------NLELRHRKCPGC 12 IQ + +CP C Sbjct: 278 IQEHAVAATSSASTSSARCPQC 299
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 31.6 bits (70), Expect = 0.56 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Frame = -1 Query: 137 ILKCGVCFD-RPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 ++ C +C D E C H FC CIQR L CP C Sbjct: 43 VMDCPICLDVAATEAQTLPCMHKFCLDCIQR-WTLTSTACPLC 84
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 31.6 bits (70), Expect = 0.56 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -1 Query: 131 KCGVCFDRPKEVVIT-KCFHLFCSTCIQRNLELRHRKCPGCGTP 3 +C +C + P + C H FC CI R + ++ CP C P Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRWIR-QNPTCPLCKVP 49
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 31.6 bits (70), Expect = 0.56 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -1 Query: 131 KCGVCFDRPKEVVIT-KCFHLFCSTCIQRNLELRHRKCPGCGTP 3 +C +C + P + C H FC CI R + ++ CP C P Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRWIR-QNPTCPLCKVP 49
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 31.6 bits (70), Expect = 0.56 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -1 Query: 134 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 12 L+C VC +R ++ V+ C H FC C+Q L KCP C Sbjct: 225 LECKVCLERQRDAVLLPCRH-FC-VCMQCYFAL-DGKCPTC 262
>ZN179_RAT (O70418) Zinc finger protein 179 (Brain finger protein)| Length = 631 Score = 31.6 bits (70), Expect = 0.56 Identities = 13/42 (30%), Positives = 19/42 (45%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 C +C +R +E + C H FC C + + PGC P Sbjct: 57 CSICLERLREPISLDCGHDFCIRCFSTH------RIPGCELP 92
>NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) (h-neu) (RING| finger protein 67) Length = 574 Score = 31.6 bits (70), Expect = 0.56 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGCGTP 3 +C +C++ + VI C H+ C C R + H CP C P Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRP 563
>BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (MIAP1) (MIAP-1) Length = 600 Score = 31.6 bits (70), Expect = 0.56 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -1 Query: 185 EATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGC 12 E ++KLQ+E C VC DR +V C HL C C RKCP C Sbjct: 541 EEQLRKLQEE-------RMCKVCMDREVSIVFIPCGHLVVCKDCAP-----SLRKCPIC 587
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 31.6 bits (70), Expect = 0.56 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = -1 Query: 158 EIKDCKAILKCGVCFDRPKEV-----VITKCFHLFCSTCIQRNLELRHRKCPGC 12 ++++ K L+C +C +E ++T C+H+F CI + LE ++ CP C Sbjct: 104 DLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLE-SNKTCPVC 156
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Frame = -1 Query: 131 KCGVCFDRPKEVVITKCFH-LFCSTCIQRNLELRHRKCPGCGTP 3 +C VC + + C H LFC C R +CP C TP Sbjct: 433 ECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTP 476
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 31.2 bits (69), Expect = 0.73 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Frame = -1 Query: 233 YXEVKNEVMELTSEN------EEATIQKLQ--DEIKDCKAILKCGVCFDRPKEVVITKCF 78 Y ++ ++ E+ S N E T Q +K +C +C D ++++ C Sbjct: 104 YKDITSQAAEVFSSNVAAEGSSEDTCQASMWMGRVKQLTDEEECCICMDGKADLILP-CA 162 Query: 77 HLFCSTCIQRNLELRHRKCPGC 12 H FC CI + + R CP C Sbjct: 163 HSFCQKCIDK-WSGQSRNCPVC 183
>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 324 Score = 31.2 bits (69), Expect = 0.73 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 92 ITKCFHLFCSTCIQRNLELRHRKCPGC 12 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) (RING finger protein 51) Length = 326 Score = 31.2 bits (69), Expect = 0.73 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 92 ITKCFHLFCSTCIQRNLELRHRKCPGC 12 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 326 Score = 31.2 bits (69), Expect = 0.73 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 92 ITKCFHLFCSTCIQRNLELRHRKCPGC 12 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>BIRC2_HUMAN (Q13490) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (HIAP2) (HIAP-2) (C-IAP1) (TNFR2-TRAF signaling complex protein 2) (IAP homolog B) Length = 618 Score = 31.2 bits (69), Expect = 0.73 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 188 EEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGC 12 E+ + L+++++ + C VC D+ VV C HL C C RKCP C Sbjct: 551 EDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAP-----SLRKCPIC 605
>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)| Length = 861 Score = 31.2 bits (69), Expect = 0.73 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQRNLEL----RHRKCPGCGTP 3 C +C + ++ + ++C H FC C+ + + CP C P Sbjct: 609 CKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFIP 654
>UB7I3_RAT (Q62921) Ubiquitin-conjugating enzyme 7-interacting protein 3 (RBCC| protein interacting with PKC) (Protein kinase C-binding protein beta-15) Length = 498 Score = 31.2 bits (69), Expect = 0.73 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Frame = -1 Query: 131 KCGVCFD--RPKE-VVITKCFHLFCSTCIQ---RNLELRHRKCP 18 +C VC+ P E VV+ +C H FC C+Q RN + CP Sbjct: 269 ECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCP 312
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/58 (25%), Positives = 29/58 (50%) Frame = -1 Query: 182 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCG 9 A I+++ +++D + +C +C + + V+T C H C C+ L + P CG Sbjct: 1023 AYIEEVIQDLRDGNS-KECPICLESADDPVLTPCAHRMCRECL-----LTSWRSPSCG 1074
>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 768 Score = 31.2 bits (69), Expect = 0.73 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -1 Query: 137 ILKCGVCFDRPKE-VVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 +L+C C + +E V + C H+FCS CI + CP C TP Sbjct: 41 LLRCSRCANILREPVCLGGCEHIFCSGCIS---DCVGSGCPVCHTP 83
>RNF39_MACMU (Q5TM52) RING finger protein 39| Length = 420 Score = 31.2 bits (69), Expect = 0.73 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Frame = -1 Query: 128 CGVCFDRPKEVVITKCFHLFCSTCIQR--------NLELRHRKCPGCGTP 3 CG F+ P V+ C H FC C+ R + E CP CG P Sbjct: 91 CGGSFEDP---VLLACEHSFCRACLARRWGTPPATDTEASPTACPCCGLP 137
>RNF34_PONPY (Q5NVC7) RING finger protein 34| Length = 372 Score = 31.2 bits (69), Expect = 0.73 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = -1 Query: 236 EYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLF-CST 60 E E N + + EN+++ ++LQ + ++ ++ C +C D + V+ +C H+ C+ Sbjct: 291 ELVEKVNRLYKENEENQKSYGERLQLQDEEDDSL--CRICMDAVIDCVLLECGHMVTCTK 348 Query: 59 CIQRNLELRHRKCPGC 12 C +R E CP C Sbjct: 349 CGKRMSE-----CPIC 359
>RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein RIFF)| (FYVE-RING finger protein Momo) (Human RING finger homologous to inhibitor of apoptosis protein) (hRFI) (Caspases-8 and -10-associated RING finger protein 1) (CARP-1) (Caspase regulat Length = 372 Score = 31.2 bits (69), Expect = 0.73 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = -1 Query: 236 EYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLF-CST 60 E E N + + EN+++ ++LQ + ++ ++ C +C D + V+ +C H+ C+ Sbjct: 291 ELVEKVNRLYKENEENQKSYGERLQLQDEEDDSL--CRICMDAVIDCVLLECGHMVTCTK 348 Query: 59 CIQRNLELRHRKCPGC 12 C +R E CP C Sbjct: 349 CGKRMSE-----CPIC 359
>RN152_MOUSE (Q8BG47) RING finger protein 152| Length = 203 Score = 31.2 bits (69), Expect = 0.73 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 7/50 (14%) Frame = -1 Query: 140 AILKCGVCFD------RPKEVVITKCFHLFCSTCIQR-NLELRHRKCPGC 12 ++L+C +CF+ RPK + C H CS C+Q+ + +CP C Sbjct: 8 SLLECQICFNYYSPRRRPK---LLDCKHTCCSVCLQQMRTSQKDVRCPWC 54
>RN152_HUMAN (Q8N8N0) RING finger protein 152| Length = 203 Score = 31.2 bits (69), Expect = 0.73 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 7/50 (14%) Frame = -1 Query: 140 AILKCGVCFD------RPKEVVITKCFHLFCSTCIQR-NLELRHRKCPGC 12 ++L+C +CF+ RPK + C H CS C+Q+ + +CP C Sbjct: 8 SLLECQICFNYYSPRRRPK---LLDCKHTCCSVCLQQMRTSQKDVRCPWC 54
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 31.2 bits (69), Expect = 0.73 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 164 QDEIKDCKAI-LKCGVCFDRPKEVVITKCFHLFCSTC 57 Q E+K+ + I KC +C K + T+C H+FC C Sbjct: 143 QKEVKEKEDIPFKCVLCKSDYKSPIKTECGHIFCKAC 179
>RNF34_BOVIN (Q5E9J6) RING finger protein 34| Length = 375 Score = 31.2 bits (69), Expect = 0.73 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = -1 Query: 236 EYXEVKNEVMELTSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLF-CST 60 E E N + + EN+++ ++LQ + ++ ++ C +C D + V+ +C H+ C+ Sbjct: 294 ELVEKVNRLYKENEENQKSYGERLQLQDEEDDSL--CRICMDAVIDCVLLECGHMVTCTK 351 Query: 59 CIQRNLELRHRKCPGC 12 C +R E CP C Sbjct: 352 CGKRMSE-----CPIC 362
>BARD1_HUMAN (Q99728) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 777 Score = 31.2 bits (69), Expect = 0.73 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -1 Query: 137 ILKCGVCFDRPKE-VVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 3 +L+C C + +E V + C H+FCS C+ + CP C TP Sbjct: 47 LLRCSRCTNILREPVCLGGCEHIFCSNCVS---DCIGTGCPVCYTP 89
>UB7I3_HUMAN (Q9BYM8) Ubiquitin-conjugating enzyme 7-interacting protein 3| (Hepatitis B virus X-associated protein 4) (HBV-associated factor 4) (RING finger protein 54) Length = 500 Score = 31.2 bits (69), Expect = 0.73 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Frame = -1 Query: 131 KCGVCFD--RPKE-VVITKCFHLFCSTCIQ---RNLELRHRKCP 18 +C VC+ P E VV+ +C H FC C+Q RN + CP Sbjct: 271 ECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCP 314 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,716,204 Number of Sequences: 219361 Number of extensions: 652101 Number of successful extensions: 3393 Number of sequences better than 10.0: 357 Number of HSP's better than 10.0 without gapping: 3245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3388 length of database: 80,573,946 effective HSP length: 62 effective length of database: 66,973,564 effective search space used: 1607365536 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
