ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd25d19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 Score = 496 bits (250), Expect = e-137 Identities = 379/422 (89%) Strand = Plus / Minus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 ||||||||||| || || ||||||||||| || |||||||| |||||||||||||| ||| Sbjct: 3334 cggaagtagaccgacacaagtgggatgtcgacatcattgtcgtcgtcatcctcacacgcc 3275 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 3274 accacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctccctggca 3215 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 3214 acatcaactaccttcctgtcaagccgttccttgtgcctggggaacatggagttgtacagc 3155 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| |||||||| ||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 3154 agcgaggtgccacaggatatgctgtaagcgttcaggcccttctccttgagccactccagg 3095 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 3094 agctccctcagcgtgatgttgcccgtcacagtccaccggtcccagaccgtccacgacaac 3035 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | ||||||||||||||||||||| || || |||||||| |||||||| ||||| || Sbjct: 3034 tcctggtgcttgatggtcttgggtggaactggttcagcaatggagaagagagggatagcg 2975 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccccccggcaaggactttgtaa 548 |||||||||||||||||||||||||||||||||||||| || || |||||| |||||||| Sbjct: 2974 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgtccaccagcaagggctttgtaa 2915 Query: 549 ag 550 || Sbjct: 2914 ag 2913
>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3695 Score = 480 bits (242), Expect = e-132 Identities = 377/422 (89%) Strand = Plus / Minus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 ||||||||||| || || ||||||||||| || || ||||| |||||||||||||||||| Sbjct: 3429 cggaagtagaccgacacaagtgggatgtcgacatcgttgtcgtcgtcatcctcacaggcc 3370 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 |||||||| || ||||| ||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 3369 accacaacgtcgagatgacgccggtaagagggcacctccatcttagccacctccctggca 3310 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 3309 acatcaacaaccttcctgtcaagccgttccttgtgcctggggaacatggagttgtacagc 3250 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 || || |||||||| ||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 3249 agagaggtgccacaggatatgctgtaagcgttcaggcccttctccttgagccactccagg 3190 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 3189 agctccctcagcgtgatgttgcctgtcacagtccaccggtcccagaccgtccacgacagc 3130 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | ||||||||||||||||||||| || || |||||||| |||||||| ||||| || Sbjct: 3129 tcctggtgcttgatggtcttgggtggaactggttcagcaatggagaagagagggatcgca 3070 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccccccggcaaggactttgtaa 548 ||||||||||||||||||||||||||||| |||||||| || || |||||| |||||||| Sbjct: 3069 aggtttgcaaacgtgttgcggtagtcttcgaccttgtgtccaccagcaagggctttgtaa 3010 Query: 549 ag 550 || Sbjct: 3009 ag 3008
>gb|BT019213.1| Zea mays clone Contig886.F mRNA sequence Length = 836 Score = 432 bits (218), Expect = e-118 Identities = 371/422 (87%) Strand = Plus / Minus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||| | ||| || || |||||||| |||||||||||||||||||||||||||||| Sbjct: 779 cggaagtaaatagacacaagcgggatgtcgacgtcattgtcatcgtcatcctcacaggcc 720 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 |||||||| ||||||||||| || || || |||||||||| |||||||||||||||||| Sbjct: 719 accacaacgtccagatggcggcggtaggaaggcacctccaccttggccacctccctggcc 660 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||| ||||||||| |||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 659 acatccaccaccttcttgtccagccgctccttgtgtctcgggaacatggagttgtacagc 600 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| || || || ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 599 agcgaggtcccgcaggatatgctgtacgcgttcaaccccttctccttcagccactccagg 540 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | || |||||||| ||||| |||||||| ||||| || ||||| |||| | Sbjct: 539 agctccctcagcgtcatgttgccagttacggtccaccggtcccacacggtccaggacatg 480 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 |||| |||||| ||||||||||| || || ||||| || || ||||||||||||||||| Sbjct: 479 tcttggtgcttcatggtcttgggcggcacaggctccgccatggagaagagggggattgcg 420 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccccccggcaaggactttgtaa 548 ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 419 aggttcgcaaatgtgttccggtagtcttcaaccttgtgcccaccagcaaggaccttgtaa 360 Query: 549 ag 550 || Sbjct: 359 ag 358
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Plus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 312156 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 312215 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 312216 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 312275 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 312276 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 312335 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 312336 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 312395 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 312396 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 312455 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 312456 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 312515 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 312516 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 312556
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Plus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 295054 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 295113 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 295114 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 295173 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 295174 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 295233 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 295234 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 295293 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 295294 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 295353 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 295354 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 295413 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 295414 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 295454
>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full insert sequence Length = 3724 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Minus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 3463 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 3404 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 3403 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 3344 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 3343 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 3284 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 3283 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 3224 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 3223 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 3164 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 3163 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 3104 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 3103 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 3063
>dbj|AK111741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049I12, full insert sequence Length = 1533 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Minus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 1356 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 1297 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 1296 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 1237 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 1236 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 1177 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 1176 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 1117 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 1116 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 1057 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1056 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 997 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 996 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 956
>dbj|AK104898.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C03, full insert sequence Length = 1510 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Minus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 1247 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 1188 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 1187 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 1128 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 1127 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 1068 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 1067 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 1008 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 1007 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 948 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 947 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 888 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 887 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 847
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Plus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 295054 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 295113 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 295114 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 295173 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 295174 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 295233 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 295234 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 295293 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 295294 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 295353 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 295354 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 295413 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 295414 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 295454
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Plus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 312156 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 312215 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 312216 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 312275 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 312276 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 312335 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 312336 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 312395 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 312396 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 312455 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 312456 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 312515 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 312516 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 312556
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Minus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 9939 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 9880 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 9879 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 9820 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 9819 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 9760 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 9759 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 9700 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 9699 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 9640 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 9639 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 9580 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 9579 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 9539
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Plus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 45207 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 45266 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 45267 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 45326 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 45327 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 45386 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 45387 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 45446 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 45447 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 45506 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 45507 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 45566 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 45567 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 45607
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 375 bits (189), Expect = e-100 Identities = 348/401 (86%) Strand = Plus / Plus Query: 129 cggaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggcc 188 |||||||||| ||||| ||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 2372 cggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctcacaagcc 2431 Query: 189 accacaacatccagatggcgccgatacgagggcacctccatcttggccacctccctggca 248 ||||| || || ||||||||||| || | ||||||||||| ||| ||||||||||| || Sbjct: 2432 accaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctccctcgcc 2491 Query: 249 acatcgaccaccttcctgtccagccgatccttgtgcctggggaacatggagttgtacagc 308 ||||||||||||||| |||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 2492 acatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttgtacagc 2551 Query: 309 agcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttgagccactccagg 368 ||||| ||||| || |||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 2552 agcgaggtgccgcaagatatgctgtatgcattcaggcccttctccttgagccagtccaga 2611 Query: 369 agctcccgtaatgtgatgttgcctgttacagtccaccgatcccagaccgtccacgacaag 428 ||||||| | ||||||||||| |||| ||||| || ||||| || ||||| | || | Sbjct: 2612 agctccctcagcgtgatgttgccagttatggtccagcggtcccaaacagtccaggccatg 2671 Query: 429 tctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgcc 488 || | |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 2672 tcctggtgcttgatggtcttgggagggaccggctcagccatagagaagagggggattgca 2731 Query: 489 aggtttgcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 2732 aggtttgcaaatgtgttcctgtagtcttcaaccttgtgccc 2772
>gb|AY103697.1| Zea mays PCO090876 mRNA sequence Length = 1314 Score = 301 bits (152), Expect = 1e-78 Identities = 321/374 (85%), Gaps = 3/374 (0%) Strand = Plus / Minus Query: 179 ctcacaggccaccacaaca-tccagatggcgccgatacgagggcacctccatcttggcca 237 |||||||||||| |||| | ||||||||||| || || || ||||| |||| |||||||| Sbjct: 1211 ctcacaggccacaacaaaagtccagatggcggcggtaggaaggcacntccaacttggcca 1152 Query: 238 -cctccctggcaacatcgaccaccttcctgtccagccgatccttgtgcctggggaacatg 296 | |||||||| | ||| ||||| ||| |||||||||| |||||||| || ||||||||| Sbjct: 1151 acntccctggccaaatcaaccac-ttcttgtccagccgctccttgtgtctcgggaacatg 1093 Query: 297 gagttgtacagcagcgacgtgccacacgatatgctgtatgcgttcaaccccttctccttg 356 ||||||||||||| ||| || || || ||||||||||| || ||||| ||||||||||| Sbjct: 1092 gagttgtacagcatcgaggtcccgcatgatatgctgtacgcattcaagcccttctccttc 1033 Query: 357 agccactccaggagctcccgtaatgtgatgttgcctgttacagtccaccgatcccagacc 416 ||||||||||||||||||| | || |||||||| ||||| ||||| || ||||| || Sbjct: 1032 agccactccaggagctccctcagcgtcatgttgccagttaccgtccagcggtcccacacg 973 Query: 417 gtccacgacaagtctttgtgcttgatggtcttgggtgggaccggctcagcaatagagaag 476 ||||| |||| ||||| ||||||||||||||||||||| || ||||| || || |||||| Sbjct: 972 gtccaggacatgtcttggtgcttgatggtcttgggtggcacaggctccgccatggagaag 913 Query: 477 agggggattgccaggtttgcaaacgtgttgcggtagtcttcaaccttgtgccccccggca 536 |||||||| |||||||| ||||| ||||| ||||||||||||||||||||||| || ||| Sbjct: 912 agggggatcgccaggttcgcaaatgtgttccggtagtcttcaaccttgtgcccaccagca 853 Query: 537 aggactttgtaaag 550 |||||||||||||| Sbjct: 852 aggactttgtaaag 839
>gb|BT019260.1| Zea mays clone Contig933.F mRNA sequence Length = 771 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 222 acctccatcttggccacctccctggcaacatcgaccaccttcctgtccagccgatccttg 281 ||||||| |||||||||||||||||| ||||| ||||||||||| | ||||| |||||| Sbjct: 307 acctccaccttggccacctccctggcgacatcaaccaccttcctctgcagcctctccttg 366 Query: 282 tgcctggggaacatggagttgtacagcag 310 ||||| | ||||||| |||||||||||| Sbjct: 367 tgcctcgcgaacatgctgttgtacagcag 395
>gb|BT018436.1| Zea mays clone EL01N0372B11.d mRNA sequence Length = 1726 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 222 acctccatcttggccacctccctggcaacatcgaccaccttcctgtccagccgatccttg 281 ||||||| |||||||||||||||||| ||||| ||||||||||| | ||||| |||||| Sbjct: 1463 acctccaccttggccacctccctggcgacatcaaccaccttcctctgcagcctctccttg 1404 Query: 282 tgcctggggaacatggagttgtacagcag 310 ||||| | ||||||| |||||||||||| Sbjct: 1403 tgcctcgcgaacatgctgttgtacagcag 1375
>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3588 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 225 tccatcttggccacctccctggcaacatcgaccaccttcctgtccagccgatccttgtgc 284 |||| |||||||||||||||||| | |||||||||||| || |||||| ||||||||| Sbjct: 3247 tccaccttggccacctccctggcgatgtcgaccaccttcttggtcagccggtccttgtgc 3188 Query: 285 ctggggaacatggagttgtacagcagcgacgtgccacacgatatgctgta 334 || | |||||| |||||||||||| || ||||| ||||| |||||||| Sbjct: 3187 ctcgcaaacatgttgttgtacagcagggaggtgccgcacgagatgctgta 3138 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 432 ttgtgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgccagg 491 |||||||| ||| |||||| ||||||||||| || || |||||||| |||| || ||| Sbjct: 3040 ttgtgcttcatgaccttgggcgggaccggctcggccatcgagaagagtgggagggcgagg 2981 Query: 492 tttgcaaacgtgttgcggtagtc 514 || || || |||||||||||||| Sbjct: 2980 ttcgcgaatgtgttgcggtagtc 2958
>ref|NM_128566.3| Arabidopsis thaliana ATUBA1; ubiquitin activating enzyme AT2G30110 (ATUBA1) mRNA, complete cds Length = 3626 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 3360 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 3301 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 3300 cactacatcaagatgg 3285
>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete sequence Length = 83796 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 53002 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 52943 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 52942 cactacatcaagatgg 52927
>gb|AY090248.1| Arabidopsis thaliana At2g30110/T27E13.15 mRNA, complete cds Length = 3561 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 3321 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 3262 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 3261 cactacatcaagatgg 3246
>dbj|AK220705.1| Arabidopsis thaliana mRNA for putative ubiquitin activating enzyme, complete cds, clone: RAFL22-01-B01 Length = 474 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 208 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 149 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 148 cactacatcaagatgg 133
>gb|BT006363.1| Arabidopsis thaliana At2g30110/T27E13.15 gene, complete cds Length = 3243 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 3237 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 3178 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 3177 cactacatcaagatgg 3162
>gb|U80808.1|ATU80808 Arabidopsis thaliana ubiquitin activating enzyme (UBA1) gene, complete cds Length = 3346 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 3334 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 3275 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 3274 cactacatcaagatgg 3259
>emb|BX821151.1|CNS0AAA1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZD10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 646 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 390 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 331 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 330 cactacatcaagatgg 315
>emb|BX820519.1|CNS0A9M5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 1167 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 1108 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 1107 cactacatcaagatgg 1092
>emb|BX820277.1|CNS0A9OY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 131 gaagtagacagatacgagtgggatgtcaacgtcattgtcatcgtcatcctcacaggccac 190 |||||||| ||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 673 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 614 Query: 191 cacaacatccagatgg 206 ||| ||||| |||||| Sbjct: 613 cactacatcaagatgg 598
>emb|AJ299395.1|CAR299395 Cicer arietinum partial mRNA for ubiquitin activating enzyme E1 (ORF), clone CanUBC-1 Length = 807 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 150 gggatgtcaacgtcattgtcatcgtcatcctcacaggccaccacaacatc 199 ||||| |||| ||||||||||||||||||||| |||||||| |||||||| Sbjct: 499 gggatatcaatgtcattgtcatcgtcatcctcgcaggccacgacaacatc 450 Score = 46.1 bits (23), Expect = 0.12 Identities = 77/95 (81%) Strand = Plus / Minus Query: 435 tgcttgatggtcttgggtgggaccggctcagcaatagagaagagggggattgccaggttt 494 |||||||| |||||| ||| || ||||||||||| || ||||| || | ||| | ||| Sbjct: 214 tgcttgataatcttggctggaactggctcagcaatggaaaagagaggcaatgctaagttg 155 Query: 495 gcaaacgtgttgcggtagtcttcaaccttgtgccc 529 ||||| ||||| |||||||| |||| |||||||| Sbjct: 154 gcaaatgtgtttcggtagtcctcaagtttgtgccc 120
>ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3522 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 276 tccttgtgcctggggaacatggagttgtacagcagcgacgtgccacacgatatgctgta 334 |||||||| || | ||||||| ||||||||||||||| |||||||| || |||||||| Sbjct: 3209 tccttgtgtcttgcgaacatgttgttgtacagcagcgaagtgccacaggaaatgctgta 3151 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 446 cttgggtgggaccggctcagcaatagagaagagggggattgccaggtttgcaaacgtgtt 505 ||||||||| || || ||||| || ||||| || || | ||||||||| ||||| || || Sbjct: 3039 cttgggtggaacaggttcagccattgagaatagtggcagtgccaggttcgcaaatgtatt 2980 Query: 506 gcggtagtcttcaa 519 |||||||||||||| Sbjct: 2979 gcggtagtcttcaa 2966
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 276 tccttgtgcctggggaacatggagttgtacagcagcgacgtgccacacgatatgctgta 334 |||||||| || | ||||||| ||||||||||||||| |||||||| || |||||||| Sbjct: 29429708 tccttgtgtcttgcgaacatgttgttgtacagcagcgaagtgccacaggaaatgctgta 29429650 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 446 cttgggtgggaccggctcagcaatagagaagagggggattgccaggtttgcaaacgtgtt 505 ||||||||| || || ||||| || ||||| || || | ||||||||| ||||| || || Sbjct: 29429538 cttgggtggaacaggttcagccattgagaatagtggcagtgccaggttcgcaaatgtatt 29429479 Query: 506 gcggtagtcttcaa 519 |||||||||||||| Sbjct: 29429478 gcggtagtcttcaa 29429465
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 276 tccttgtgcctggggaacatggagttgtacagcagcgacgtgccacacgatatgctgta 334 |||||||| || | ||||||| ||||||||||||||| |||||||| || |||||||| Sbjct: 92630 tccttgtgtcttgcgaacatgttgttgtacagcagcgaagtgccacaggaaatgctgta 92572 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 446 cttgggtgggaccggctcagcaatagagaagagggggattgccaggtttgcaaacgtgtt 505 ||||||||| || || ||||| || ||||| || || | ||||||||| ||||| || || Sbjct: 92460 cttgggtggaacaggttcagccattgagaatagtggcagtgccaggttcgcaaatgtatt 92401 Query: 506 gcggtagtcttcaa 519 |||||||||||||| Sbjct: 92400 gcggtagtcttcaa 92387
>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full insert sequence Length = 3522 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 446 cttgggtgggaccggctcagcaatagagaagagggggattgccaggtttgcaaacgtgtt 505 ||||||||| || || ||||| || ||||| || || | ||||||||| ||||| || || Sbjct: 3039 cttgggtggaacaggttcagccattgagaatagtggcagtgccaggttcgcaaatgtatt 2980 Query: 506 gcggtagtcttcaa 519 |||||||||||||| Sbjct: 2979 gcggtagtcttcaa 2966
>ref|XM_518859.1| PREDICTED: Pan troglodytes similar to thrombospondin 2 precursor (LOC463138), mRNA Length = 5034 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||||| |||||||| Sbjct: 2692 cgtcattgtcatcgtcatcatcacaggc 2665
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.031 Identities = 126/160 (78%) Strand = Plus / Plus Query: 150 gggatgtcaacgtcattgtcatcgtcatcctcacaggccaccacaacatccagatggcgc 209 |||||||| |||||||| |||| ||||| |||||||| || || |||||||| || | | Sbjct: 10271264 gggatgtcgacgtcattcccatcatcatcttcacaggcaacgacgacatccaggtgcctc 10271323 Query: 210 cgatacgagggcacctccatcttggccacctccctggcaacatcgaccaccttcctgtcc 269 | || | || || |||| ||| ||||||||| |||| ||||| || | |||| ||| | Sbjct: 10271324 ctgtatgccggaacgtccaccttcgccacctccttggcgacatccacgagcttcttgttc 10271383 Query: 270 agccgatccttgtgcctggggaacatggagttgtacagca 309 | ||||||||||| || || ||||||| |||||| |||| Sbjct: 10271384 actcgatccttgtgtctcggaaacatggtgttgtaaagca 10271423
>emb|BX322234.7| Human DNA sequence from clone XXyac-65C7_A on chromosome 6 Contains the THBS2 gene for thrombospondin 2, two novel genes, a chromosome 6 open reading frame 55 (C6orf55) pseudogene and two CpG islands, complete sequence Length = 159175 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||||| |||||||| Sbjct: 40569 cgtcattgtcatcgtcatcatcacaggc 40596
>emb|AL583824.16| Human DNA sequence from clone RP11-79M19 on chromosome 10 Contains part of the GPRK5 gene for G protein-coupled receptor kinase 5 (GRK5) and a novel gene, complete sequence Length = 55700 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 cgtcattgtcatcgtcatcctcac 183 |||||||||||||||||||||||| Sbjct: 10385 cgtcattgtcatcgtcatcctcac 10408
>ref|NM_003247.2| Homo sapiens thrombospondin 2 (THBS2), mRNA Length = 5826 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||||| |||||||| Sbjct: 2490 cgtcattgtcatcgtcatcatcacaggc 2463
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 48.1 bits (24), Expect = 0.031 Identities = 126/160 (78%) Strand = Plus / Plus Query: 150 gggatgtcaacgtcattgtcatcgtcatcctcacaggccaccacaacatccagatggcgc 209 |||||||| |||||||| |||| ||||| |||||||| || || |||||||| || | | Sbjct: 132677 gggatgtcgacgtcattcccatcatcatcttcacaggcaacgacgacatccaggtgcctc 132736 Query: 210 cgatacgagggcacctccatcttggccacctccctggcaacatcgaccaccttcctgtcc 269 | || | || || |||| ||| ||||||||| |||| ||||| || | |||| ||| | Sbjct: 132737 ctgtatgccggaacgtccaccttcgccacctccttggcgacatccacgagcttcttgttc 132796 Query: 270 agccgatccttgtgcctggggaacatggagttgtacagca 309 | ||||||||||| || || ||||||| |||||| |||| Sbjct: 132797 actcgatccttgtgtctcggaaacatggtgttgtaaagca 132836
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.031 Identities = 126/160 (78%) Strand = Plus / Plus Query: 150 gggatgtcaacgtcattgtcatcgtcatcctcacaggccaccacaacatccagatggcgc 209 |||||||| |||||||| |||| ||||| |||||||| || || |||||||| || | | Sbjct: 10269365 gggatgtcgacgtcattcccatcatcatcttcacaggcaacgacgacatccaggtgcctc 10269424 Query: 210 cgatacgagggcacctccatcttggccacctccctggcaacatcgaccaccttcctgtcc 269 | || | || || |||| ||| ||||||||| |||| ||||| || | |||| ||| | Sbjct: 10269425 ctgtatgccggaacgtccaccttcgccacctccttggcgacatccacgagcttcttgttc 10269484 Query: 270 agccgatccttgtgcctggggaacatggagttgtacagca 309 | ||||||||||| || || ||||||| |||||| |||| Sbjct: 10269485 actcgatccttgtgtctcggaaacatggtgttgtaaagca 10269524
>dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129J22, full insert sequence Length = 3682 Score = 48.1 bits (24), Expect = 0.031 Identities = 126/160 (78%) Strand = Plus / Minus Query: 150 gggatgtcaacgtcattgtcatcgtcatcctcacaggccaccacaacatccagatggcgc 209 |||||||| |||||||| |||| ||||| |||||||| || || |||||||| || | | Sbjct: 3374 gggatgtcgacgtcattcccatcatcatcttcacaggcaacgacgacatccaggtgcctc 3315 Query: 210 cgatacgagggcacctccatcttggccacctccctggcaacatcgaccaccttcctgtcc 269 | || | || || |||| ||| ||||||||| |||| ||||| || | |||| ||| | Sbjct: 3314 ctgtatgccggaacgtccaccttcgccacctccttggcgacatccacgagcttcttgttc 3255 Query: 270 agccgatccttgtgcctggggaacatggagttgtacagca 309 | ||||||||||| || || ||||||| |||||| |||| Sbjct: 3254 actcgatccttgtgtctcggaaacatggtgttgtaaagca 3215
>gb|M81339.1|HUMTHRSPD Human thrombospondin mRNA Length = 2780 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||||| |||||||| Sbjct: 566 cgtcattgtcatcgtcatcatcacaggc 539
>gb|L12350.1|HUMTHRSPO Human thrombospondin 2 (THBS2) mRNA, complete cds Length = 5784 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||||| |||||||| Sbjct: 2481 cgtcattgtcatcgtcatcatcacaggc 2454
>ref|XM_710731.1| Candida albicans SC5314 hypothetical protein (CaO19_10361), mRNA Length = 2148 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 156 tcaacgtcattgtcatcgtcatc 178 ||||||||||||||||||||||| Sbjct: 1177 tcaacgtcattgtcatcgtcatc 1199
>ref|XM_710680.1| Candida albicans SC5314 hypothetical protein (CaO19_2842), mRNA Length = 2133 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 156 tcaacgtcattgtcatcgtcatc 178 ||||||||||||||||||||||| Sbjct: 1150 tcaacgtcattgtcatcgtcatc 1172
>emb|AL627182.22| Mouse DNA sequence from clone RP23-32K12 on chromosome 4, complete sequence Length = 241562 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 152 gatgtcaacgtcattgtcatcgtcatcctca 182 |||||||||||||||||| || ||||||||| Sbjct: 156105 gatgtcaacgtcattgtcctcatcatcctca 156135
>gb|BC076655.1| Xenopus tropicalis matrin 3, mRNA (cDNA clone MGC:79524 IMAGE:6977687), complete cds Length = 3174 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 acctccatcttggccacctccc 243 |||||||||||||||||||||| Sbjct: 1307 acctccatcttggccacctccc 1286
>ref|XM_510294.1| PREDICTED: Pan troglodytes LOC453319 (LOC453319), mRNA Length = 4317 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||| |||||||| Sbjct: 2432 tcattgtcatcgtcatcatcacaggc 2407
>ref|NM_003246.2| Homo sapiens thrombospondin 1 (THBS1), mRNA Length = 5820 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||| |||||||| Sbjct: 2413 tcattgtcatcgtcatcatcacaggc 2388
>gb|AC151307.2| Xenopus tropicalis clone CH216-61M14, complete sequence Length = 164963 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 acctccatcttggccacctccc 243 |||||||||||||||||||||| Sbjct: 87684 acctccatcttggccacctccc 87705
>ref|NM_001006791.1| Xenopus tropicalis matrin 3 (matr3), mRNA Length = 3174 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 acctccatcttggccacctccc 243 |||||||||||||||||||||| Sbjct: 1307 acctccatcttggccacctccc 1286
>gb|AC037198.7|AC037198 Homo sapiens chromosome 15 clone CTD-2033D15 map 15q14, complete sequence Length = 185695 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||| |||||||| Sbjct: 55949 tcattgtcatcgtcatcatcacaggc 55924
>emb|CR761638.2| Xenopus tropicalis finished cDNA, clone TGas107n11 Length = 1855 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 acctccatcttggccacctccc 243 |||||||||||||||||||||| Sbjct: 1179 acctccatcttggccacctccc 1158
>dbj|AB209912.1| Homo sapiens mRNA for thrombospondin 1 precursor variant protein Length = 3904 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||| |||||||| Sbjct: 2399 tcattgtcatcgtcatcatcacaggc 2374
>emb|X14787.1|HSTS Human mRNA for thrombospondin Length = 5722 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||| |||||||| Sbjct: 2345 tcattgtcatcgtcatcatcacaggc 2320
>emb|X04665.1|HSTHROMR Human mRNA for thrombospondin Length = 4434 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctcacaggc 187 ||||||||||||||||| |||||||| Sbjct: 2309 tcattgtcatcgtcatcatcacaggc 2284
>ref|NM_120729.2| Arabidopsis thaliana ATUBA2; ubiquitin activating enzyme AT5G06460 (ATUBA2) mRNA, complete cds Length = 3379 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 450 ggtgggaccggctcagcaatagagaagagggggattgccaggtttgcaaacgtgttgcgg 509 ||||| ||||||||||| || |||||||| || | ||| | ||| ||||| ||||| | | Sbjct: 2909 ggtggaaccggctcagccatggagaagagcggaagtgctaagttagcaaatgtgtttctg 2850 Query: 510 tagtcttcaaccttgtg 526 |||||||| || ||||| Sbjct: 2849 tagtcttctactttgtg 2833
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 cagaggggagcctgtcaacgg 131 ||||||||||||||||||||| Sbjct: 2835519 cagaggggagcctgtcaacgg 2835499
>gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BAC T28K15 genomic sequence, complete sequence Length = 88643 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ataataataactactactgta 50 ||||||||||||||||||||| Sbjct: 67458 ataataataactactactgta 67478
>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15 Length = 83865 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 450 ggtgggaccggctcagcaatagagaagagggggattgccaggtttgcaaacgtgttgcgg 509 ||||| ||||||||||| || |||||||| || | ||| | ||| ||||| ||||| | | Sbjct: 82525 ggtggaaccggctcagccatggagaagagcggaagtgctaagttagcaaatgtgtttctg 82466 Query: 510 tagtcttcaaccttgtg 526 |||||||| || ||||| Sbjct: 82465 tagtcttctactttgtg 82449
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ataataataactactactgta 50 ||||||||||||||||||||| Sbjct: 9558 ataataataactactactgta 9578
>gb|AF000580.1|AF000580 Dictyostelium discoideum plasmid Ddp5, complete genome Length = 14955 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 tgtcaacgtcattgtcatcgtcatc 178 ||||||||||||||||| ||||||| Sbjct: 1030 tgtcaacgtcattgtcaacgtcatc 1006 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 tgtcaacgtcattgtcatcgtcatc 178 |||||||||||| |||||||||||| Sbjct: 1018 tgtcaacgtcatcgtcatcgtcatc 994
>emb|BX004887.2| Zebrafish DNA sequence from clone CH211-150E4, complete sequence Length = 186834 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 ataataataactactactgtataaa 54 |||||||||| |||||||||||||| Sbjct: 93212 ataataataaatactactgtataaa 93188
>emb|BX897750.11| Zebrafish DNA sequence from clone DKEY-278N18, complete sequence Length = 182033 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 acagtataataataactacta 45 ||||||||||||||||||||| Sbjct: 38752 acagtataataataactacta 38772
>gb|U40566.1|ATU40566 Arabidopsis thaliana ubiquitin activating enzyme 2 (UBA2) gene, complete cds Length = 4000 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 450 ggtgggaccggctcagcaatagagaagagggggattgccaggtttgcaaacgtgttgcgg 509 ||||| ||||||||||| || |||||||| || | ||| | ||| ||||| ||||| | | Sbjct: 3322 ggtggaaccggctcagccatggagaagagcggaagtgctaagttagcaaatgtgtttctg 3263 Query: 510 tagtcttcaaccttgtg 526 |||||||| || ||||| Sbjct: 3262 tagtcttctactttgtg 3246
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gtcaacgtcattgtcatcgtcatc 178 |||| ||||||||||||||||||| Sbjct: 84338 gtcatcgtcattgtcatcgtcatc 84361
>ref|XM_640831.1| Dictyostelium discoideum putative protein tyrosine kinase (DDB0191503), partial mRNA Length = 9555 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tataataataactactactg 48 |||||||||||||||||||| Sbjct: 742 tataataataactactactg 723
>gb|AE017139.1| Yersinia pestis biovar Medievalis str. 91001 section 13 of 16 of the complete genome Length = 294253 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aacgtcattgtcatcgtcat 177 |||||||||||||||||||| Sbjct: 212434 aacgtcattgtcatcgtcat 212453
>gb|AC111030.11| Mus musculus chromosome 5, clone RP23-415E17, complete sequence Length = 229028 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctcacaggccaccacaacat 198 |||||||||||||||||||| Sbjct: 15511 ctcacaggccaccacaacat 15492
>gb|AC092238.2| Drosophila melanogaster clone BACR03D18, complete sequence Length = 184681 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 cgtcattgtcatcgtcatcctcac 183 |||||| ||||||||||||||||| Sbjct: 64868 cgtcatcgtcatcgtcatcctcac 64891
>ref|XM_365395.1| Magnaporthe grisea 70-15 hypothetical protein (MG02097.4) partial mRNA Length = 2472 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acgtcattgtcatcgtcatc 178 |||||||||||||||||||| Sbjct: 2084 acgtcattgtcatcgtcatc 2065
>ref|XM_461467.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F27489g) partial mRNA Length = 2595 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gtcaacgtcattgtcatcgtcatc 178 |||| ||||||||||||||||||| Sbjct: 1041 gtcatcgtcattgtcatcgtcatc 1018
>gb|AC140247.3| Mus musculus BAC clone RP23-469I15 from chromosome 9, complete sequence Length = 189336 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acgtcattgtcatcgtcatc 178 |||||||||||||||||||| Sbjct: 19542 acgtcattgtcatcgtcatc 19561
>gb|BC042422.1| Mus musculus thrombospondin 1, mRNA (cDNA clone MGC:27523 IMAGE:4018176), complete cds Length = 5812 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 2891 cgtcattgtcatcgtcatggtcacaggc 2864
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 aacgtcattgtcatcgtcat 177 |||||||||||||||||||| Sbjct: 4327569 aacgtcattgtcatcgtcat 4327550
>ref|XM_917391.2| PREDICTED: Mus musculus similar to thrombospondin 1 (LOC640441), mRNA Length = 5786 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 2866 cgtcattgtcatcgtcatggtcacaggc 2839
>ref|NM_011580.2| Mus musculus thrombospondin 1 (Thbs1), mRNA Length = 5819 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 2889 cgtcattgtcatcgtcatggtcacaggc 2862
>gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete sequence Length = 238657 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gtcaacgtcattgtcatcgtcatc 178 |||| ||||||||||||||||||| Sbjct: 129557 gtcatcgtcattgtcatcgtcatc 129580
>gb|U58632.2|TNU58632 Thermotoga neapolitana xylan catabolic cluster and associated ABC transport system, complete sequence Length = 12298 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cactatcttcgttctggaaa 84 |||||||||||||||||||| Sbjct: 6190 cactatcttcgttctggaaa 6171
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gtcaacgtcattgtcatcgtcatc 178 |||| ||||||||||||||||||| Sbjct: 2188770 gtcatcgtcattgtcatcgtcatc 2188793
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aacgtcattgtcatcgtcat 177 |||||||||||||||||||| Sbjct: 4518728 aacgtcattgtcatcgtcat 4518747
>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4 Length = 313050 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 tgtcaacgtcattgtcatcgtcat 177 ||||| |||||||||||||||||| Sbjct: 66439 tgtcatcgtcattgtcatcgtcat 66416
>emb|AL391254.2|ATF28D10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28D10 Length = 49890 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctcacag 185 ||||||||||| |||||||||||| Sbjct: 3290 tcattgtcatcatcatcctcacag 3267
>emb|AJ414159.1| Yersinia pestis strain CO92 complete genome; segment 19/20 Length = 199050 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aacgtcattgtcatcgtcat 177 |||||||||||||||||||| Sbjct: 190514 aacgtcattgtcatcgtcat 190533
>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence Length = 198253 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctc 181 |||||||||||||||||||| Sbjct: 123957 tcattgtcatcgtcatcctc 123938
>emb|BX276181.15| Zebrafish DNA sequence from clone CH211-247O20 in linkage group 5, complete sequence Length = 154012 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 gtttacagtataataataactact 44 ||||||||||| |||||||||||| Sbjct: 97427 gtttacagtattataataactact 97404
>gb|AC104608.7| Drosophila melanogaster X BAC RP98-35A18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174893 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 cgtcattgtcatcgtcatcctcac 183 ||||||||||||||||||| |||| Sbjct: 55839 cgtcattgtcatcgtcatcgtcac 55862
>ref|NM_135892.2| Drosophila melanogaster NC2 CG4185-RA (NC2beta), mRNA Length = 720 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcac 183 |||||| ||||||||||||||||| Sbjct: 637 cgtcatcgtcatcgtcatcctcac 614
>dbj|AB077116.1| Prunus persica mRNA, microsatellite marker M13b Length = 615 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gtcaacgtcattgtcatcgtcatc 178 ||||||||||| |||||||||||| Sbjct: 69 gtcaacgtcatcgtcatcgtcatc 92
>dbj|AK145202.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930018O21 product:thrombospondin 1, full insert sequence Length = 5824 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 2919 cgtcattgtcatcgtcatggtcacaggc 2892
>gb|M62465.1|MUSTHREX17 Mus musculus thrombospondin (THBS1) gene, exon 17 Length = 247 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 178 cgtcattgtcatcgtcatggtcacaggc 151
>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence Length = 166114 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtataaaggaactcaaaca 66 |||||||||||||||||||| Sbjct: 9690 tgtataaaggaactcaaaca 9709
>gb|AY060717.1| Drosophila melanogaster GH16072 full length cDNA Length = 718 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcac 183 |||||| ||||||||||||||||| Sbjct: 616 cgtcatcgtcatcgtcatcctcac 593
>dbj|AK163092.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530055N06 product:thrombospondin 1, full insert sequence Length = 4101 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 2916 cgtcattgtcatcgtcatggtcacaggc 2889
>gb|AC016031.6| Homo sapiens, clone RP11-12J8, complete sequence Length = 139690 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtataaaggaactcaaaca 66 |||||||||||||||||||| Sbjct: 61125 tgtataaaggaactcaaaca 61106
>gb|AC157477.2| Mus musculus BAC clone RP24-141A7 from chromosome 9, complete sequence Length = 163557 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acgtcattgtcatcgtcatc 178 |||||||||||||||||||| Sbjct: 159041 acgtcattgtcatcgtcatc 159060
>dbj|AK080686.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830097L06 product:THROMBOSPONDIN 1 PRECURSOR homolog [Mus musculus], full insert sequence Length = 4109 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 2924 cgtcattgtcatcgtcatggtcacaggc 2897
>dbj|AK089315.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730004F21 product:Warning: possibly reversed clone, full insert sequence Length = 3530 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 1501 cgtcattgtcatcgtcatggtcacaggc 1528
>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence Length = 212548 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ctcacaggccaccacaacat 198 |||||||||||||||||||| Sbjct: 83 ctcacaggccaccacaacat 102
>gb|BT004059.1| Arabidopsis thaliana clone RAFL15-16-E02 (R20484) At3g44820 mRNA, partial sequence Length = 2193 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 tcattgtcatcgtcatcctcacag 185 ||||||||||| |||||||||||| Sbjct: 862 tcattgtcatcatcatcctcacag 885
>gb|AF302257.1|AF302257 Drosophila melanogaster NC2beta mRNA, complete cds Length = 718 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcac 183 |||||| ||||||||||||||||| Sbjct: 616 cgtcatcgtcatcgtcatcctcac 593
>gb|AY170918.1| Dictyostelium discoideum pats1 gene, partial cds Length = 8892 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tataataataactactactg 48 |||||||||||||||||||| Sbjct: 265 tataataataactactactg 246
>emb|AJ515534.1|AHI515534 Antirrhinum hispanicum slf-S4D, slf-S4A and slf-S4 genes Length = 54556 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 155 gtcaacgtcattgtcatcgtcatcctca 182 |||| |||||| |||||||||||||||| Sbjct: 51826 gtcatcgtcatcgtcatcgtcatcctca 51853
>emb|AL928957.9| Mouse DNA sequence from clone RP23-75E19 on chromosome 2, complete sequence Length = 110685 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 107277 cgtcattgtcatcgtcatggtcacaggc 107250
>gb|BC050917.1| Mus musculus thrombospondin 1, mRNA (cDNA clone MGC:63222 IMAGE:6405710), complete cds Length = 5819 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 2889 cgtcattgtcatcgtcatggtcacaggc 2862
>gb|AE003646.3| Drosophila melanogaster chromosome 2L, section 55 of 83 of the complete sequence Length = 265413 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcac 183 |||||| ||||||||||||||||| Sbjct: 8240 cgtcatcgtcatcgtcatcctcac 8217
>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete sequence Length = 285949 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcac 183 ||||||||||||||||||| |||| Sbjct: 68795 cgtcattgtcatcgtcatcgtcac 68772
>gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, complete sequence Length = 192545 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tcattgtcatcgtcatcctc 181 |||||||||||||||||||| Sbjct: 89486 tcattgtcatcgtcatcctc 89467
>emb|AL845529.10| Mouse DNA sequence from clone RP23-276D17 on chromosome 2, complete sequence Length = 166971 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gtcaacgtcattgtcatcgtcatc 178 |||| ||||||||||||||||||| Sbjct: 90493 gtcatcgtcattgtcatcgtcatc 90470
>dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complete genome Length = 105340 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tatgatgtcaattcagaggg 117 |||||||||||||||||||| Sbjct: 70896 tatgatgtcaattcagaggg 70915
>gb|M87276.1|MUSTSP1A Mouse thrombospondin 1 mRNA, complete cds Length = 4339 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 160 cgtcattgtcatcgtcatcctcacaggc 187 |||||||||||||||||| |||||||| Sbjct: 2915 cgtcattgtcatcgtcatggtcacaggc 2888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,199,652 Number of Sequences: 3902068 Number of extensions: 4199652 Number of successful extensions: 87575 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87166 Number of HSP's gapped (non-prelim): 405 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
