ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25d15 |
|---|---|
| Clone Library Name | barley_pub |
>F26_RANCA (Q91309) 6PF-2-K/Fru-2,6-P2ASE liver/muscle isozymes [Includes:| 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 470 Score = 97.1 bits (240), Expect = 3e-20 Identities = 45/79 (56%), Positives = 62/79 (78%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EE+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQAV+R L +YF D Sbjct: 347 EEFALRDQDKYRYRYPKGESYEDIVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLD 405 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P ++ PLHT++++ Sbjct: 406 KTAEELPYLKCPLHTVLKL 424
>F26L_CHICK (Q91348) 6PF-2-K/Fru-2,6-P2ASE liver isozyme [Includes:| 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 470 Score = 96.3 bits (238), Expect = 5e-20 Identities = 47/87 (54%), Positives = 63/87 (72%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EE+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQAV+R L +YF D Sbjct: 347 EEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLD 405 Query: 365 RPLREVPDMEMPLHTIIEIQMGVTGVE 285 + E+P + PLHT++++ G E Sbjct: 406 KSSEELPYLRCPLHTVLKLTPVAYGCE 432
>F26_CAEEL (Q21122) Putative 6PF-2-K/Fru-2,6-P2ASE [Includes:| 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 457 Score = 96.3 bits (238), Expect = 5e-20 Identities = 45/79 (56%), Positives = 63/79 (79%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 ++ + R DK YRYP GESY DV+ RLEPVI+ELERQ A V+V+SHQAVLR + +YF D Sbjct: 344 KQADDRATDKYHYRYPSGESYEDVVSRLEPVIMELERQ-ANVLVVSHQAVLRCVLAYFYD 402 Query: 365 RPLREVPDMEMPLHTIIEI 309 RPL E+P +++PLH+++++ Sbjct: 403 RPLSELPYIDIPLHSLVKL 421
>F263_RAT (O35552) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3| (6PF-2-K/Fru-2,6-P2ASE brain-type isozyme) (RB2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 555 Score = 95.9 bits (237), Expect = 7e-20 Identities = 46/79 (58%), Positives = 61/79 (77%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EEY R++DK YRYP GESY D++QRLEPVI+ELERQ V+VI HQAVLR L +YF D Sbjct: 343 EEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQE-NVLVICHQAVLRCLLAYFLD 401 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P ++ PLHT++++ Sbjct: 402 KSAEEMPYLKCPLHTVLKL 420
>F263_HUMAN (Q16875) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3| (6PF-2-K/Fru-2,6-P2ASE brain/placenta-type isozyme) (iPFK-2) (NY-REN-56 antigen) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 520 Score = 95.9 bits (237), Expect = 7e-20 Identities = 46/79 (58%), Positives = 61/79 (77%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EEY R++DK YRYP GESY D++QRLEPVI+ELERQ V+VI HQAVLR L +YF D Sbjct: 343 EEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQE-NVLVICHQAVLRCLLAYFLD 401 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P ++ PLHT++++ Sbjct: 402 KSAEEMPYLKCPLHTVLKL 420
>F261_RAT (P07953) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1| (6PF-2-K/Fru-2,6-P2ASE liver isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 470 Score = 95.1 bits (235), Expect = 1e-19 Identities = 45/79 (56%), Positives = 62/79 (78%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EE+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQAV+R L +YF D Sbjct: 347 EEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLD 405 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P ++ PLHT++++ Sbjct: 406 KSSDELPYLKCPLHTVLKL 424
>F261_HUMAN (P16118) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1| (6PF-2-K/Fru-2,6-P2ASE liver isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 471 Score = 95.1 bits (235), Expect = 1e-19 Identities = 45/79 (56%), Positives = 62/79 (78%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EE+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQAV+R L +YF D Sbjct: 348 EEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLD 406 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P ++ PLHT++++ Sbjct: 407 KSSDELPYLKCPLHTVLKL 425
>F261_BOVIN (P49872) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1| (6PF-2-K/Fru-2,6-P2ASE liver isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 471 Score = 95.1 bits (235), Expect = 1e-19 Identities = 45/79 (56%), Positives = 62/79 (78%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EE+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQAV+R L +YF D Sbjct: 348 EEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLD 406 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P ++ PLHT++++ Sbjct: 407 KSSDELPYLKCPLHTVLKL 425
>F264_RAT (P25114) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4| (6PF-2-K/Fru-2,6-P2ASE testis-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 468 Score = 94.4 bits (233), Expect = 2e-19 Identities = 44/78 (56%), Positives = 61/78 (78%) Frame = -3 Query: 542 EYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFADR 363 E+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQAV+R L +YF D+ Sbjct: 346 EFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLDK 404 Query: 362 PLREVPDMEMPLHTIIEI 309 E+P ++ PLHT++++ Sbjct: 405 AAEELPYLKCPLHTVLKL 422
>F26_YEAST (P32604) Fructose-2,6-bisphosphatase (EC 3.1.3.46)| Length = 452 Score = 93.2 bits (230), Expect = 4e-19 Identities = 46/92 (50%), Positives = 65/92 (70%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 E++++R DK YRY GESY DV+ RLEPVI+ELERQ V++I+HQAVLR +Y+YF + Sbjct: 322 EDFKARDNDKYEYRYRGGESYRDVVIRLEPVIMELERQE-NVLIITHQAVLRCIYAYFMN 380 Query: 365 RPLREVPDMEMPLHTIIEIQMGVTGVEEKRYK 270 P E P M +PLHT+I+++ G + + K Sbjct: 381 VPQEESPWMSIPLHTLIKLEPRAYGTKVTKIK 412
>F264_HUMAN (Q16877) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4| (6PF-2-K/Fru-2,6-P2ASE testis-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 468 Score = 93.2 bits (230), Expect = 4e-19 Identities = 43/78 (55%), Positives = 61/78 (78%) Frame = -3 Query: 542 EYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFADR 363 E+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQAV+R L +YF D+ Sbjct: 346 EFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLDK 404 Query: 362 PLREVPDMEMPLHTIIEI 309 ++P ++ PLHT++++ Sbjct: 405 AAEQLPYLKCPLHTVLKL 422
>F262_HUMAN (O60825) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 505 Score = 92.4 bits (228), Expect = 8e-19 Identities = 48/93 (51%), Positives = 64/93 (68%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EE+ R ++K YRYP GESY D++QRLEPVI+ELERQ V+VISHQAV+R L +YF D Sbjct: 346 EEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNVLVISHQAVMRCLLAYFLD 404 Query: 365 RPLREVPDMEMPLHTIIEIQMGVTGVEEKRYKL 267 + E+P + PLHTI ++ G + + KL Sbjct: 405 KGADELPYLRCPLHTIFKLTPVAYGCKVETIKL 437
>F262_BOVIN (P26285) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 530 Score = 91.3 bits (225), Expect = 2e-18 Identities = 47/93 (50%), Positives = 64/93 (68%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 +E+ R ++K YRYP GESY D++QRLEPVI+ELERQ V+VISHQAV+R L +YF D Sbjct: 346 DEFALRDEEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNVLVISHQAVMRCLLAYFLD 404 Query: 365 RPLREVPDMEMPLHTIIEIQMGVTGVEEKRYKL 267 + E+P + PLHTI ++ G + + KL Sbjct: 405 KGADELPYLRCPLHTIFKLTPVAYGCKVETIKL 437
>F262_RAT (Q9JJH5) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) (RH2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 557 Score = 88.6 bits (218), Expect = 1e-17 Identities = 44/79 (55%), Positives = 58/79 (73%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EE+ R ++K YRYP GESY D++QRLEPVI+ELERQ V+VISHQAV+R L +YF D Sbjct: 349 EEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNVLVISHQAVMRCLLAYFLD 407 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P + PLH I ++ Sbjct: 408 KGADELPYLRCPLHIIFKL 426
>F262_MOUSE (P70265) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2| (6PF-2-K/Fru-2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 519 Score = 88.2 bits (217), Expect = 1e-17 Identities = 43/79 (54%), Positives = 58/79 (73%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EE+ R ++K YRYP GESY D++QRLEPVI+ELERQ ++VISHQAV+R L +YF D Sbjct: 349 EEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNILVISHQAVMRCLLAYFLD 407 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P + PLH I ++ Sbjct: 408 KGADELPYLRCPLHIIFKL 426
>F263_BOVIN (Q28901) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3| (6PF-2-K/Fru-2,6-P2ASE brain/placenta-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] (Fragment) Length = 463 Score = 85.9 bits (211), Expect = 7e-17 Identities = 42/79 (53%), Positives = 56/79 (70%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFAD 366 EEY + DK YRYP GESY D++QRLEPVI+ELERQ V+VI HQAV L +YF D Sbjct: 344 EEYALAEADKYYYRYPTGESYQDLVQRLEPVIMELERQE-NVLVICHQAVCVCLLAYFLD 402 Query: 365 RPLREVPDMEMPLHTIIEI 309 + E+P ++ PLH ++++ Sbjct: 403 KSAEEMPYLKCPLHAVLKL 421
>6P21_YEAST (P40433) 6-phosphofructo-2-kinase 1 (EC 2.7.1.105)| (Phosphofructokinase 2 I) (6PF-2-K 1) Length = 827 Score = 84.0 bits (206), Expect = 3e-16 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 2/78 (2%) Frame = -3 Query: 545 EEYESRKKDKLRYRYPR--GESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYF 372 EE+E R+KDKLRYRYP GESY+DVI RL PVI ELER V++I+H+ V RAL YF Sbjct: 517 EEFEKRQKDKLRYRYPGIGGESYMDVINRLRPVITELERIEDNVLIITHRVVARALLGYF 576 Query: 371 ADRPLREVPDMEMPLHTI 318 + + + ++++PLH + Sbjct: 577 MNLSMGIIANLDVPLHCV 594
>DHX34_HUMAN (Q14147) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)| (DEAH box protein 34) Length = 576 Score = 33.1 bits (74), Expect = 0.55 Identities = 22/80 (27%), Positives = 42/80 (52%) Frame = -3 Query: 548 LEEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFA 369 L +YE D++ R+ + L V+QRL P +L+ V+++S + SYF+ Sbjct: 270 LPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLK-----VILMSATINISLFSSYFS 324 Query: 368 DRPLREVPDMEMPLHTIIEI 309 + P+ +VP P+ T+ ++ Sbjct: 325 NAPVVQVPGRLFPI-TVFDV 343
>LDHA_RAT (P04642) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 332 Score = 32.7 bits (73), Expect = 0.72 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SLK L+ + +A W D+ Sbjct: 197 SVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDV 230
>DHX34_MOUSE (Q9DBV3) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)| (DEAH box protein 34) Length = 1145 Score = 32.7 bits (73), Expect = 0.72 Identities = 21/81 (25%), Positives = 39/81 (48%) Frame = -3 Query: 548 LEEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFA 369 L +Y+ D++ R+ + L V+QRL P +R V+++S + SYF+ Sbjct: 272 LPQYQVLIVDEVHERHLHNDFLLGVLQRLLP-----QRPDLKVILMSATINISLFSSYFS 326 Query: 368 DRPLREVPDMEMPLHTIIEIQ 306 P+ +VP P+ + + Q Sbjct: 327 HAPVVQVPGRLFPITVVYQPQ 347
>GAP1_DROME (P48423) GTPase-activating protein (Ras GTPase-activating protein)| Length = 1163 Score = 32.7 bits (73), Expect = 0.72 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = +3 Query: 360 RPVGKIRVQRSQYGLVGYNDHWCSLPFELDDNRFQPLNHIKV 485 +P+GKI ++R + + + DHW SL D+ Q + +++V Sbjct: 126 KPIGKIAIKREELHMYNHKDHWFSLRPVDQDSEVQGMVNVEV 167
>LDHA_RHIDE (Q9PW58) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 32.3 bits (72), Expect = 0.94 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAW 405 S+ VWSG++++G SL+GL+ K S W Sbjct: 196 SVPVWSGVNVAGVSLQGLNPKMGVEGDSENW 226
>LDHA_MONDO (Q9XT87) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 31.6 bits (70), Expect = 1.6 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SLK L ++ S W D+ Sbjct: 196 SVPVWSGVNVAGVSLKSLHPALGTDSDSEQWKDV 229
>RPB5_KLULA (Q6CJ62) DNA-directed RNA polymerases II 24 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase II subunit 5) Length = 215 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = -3 Query: 536 ESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYF 372 E+ KK+ L+ RY ES L IQR++PV + L +R V+ I ++ Y+ + Sbjct: 158 EAEKKELLK-RYRLKESQLPRIQRMDPVALYLGLKRGEVIKIIRKSETSGRYASY 211
>LDHA_MOUSE (P06151) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 31.2 bits (69), Expect = 2.1 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SLK L+ + +A W ++ Sbjct: 196 SVPVWSGVNVAGVSLKSLNPELGTDADKEQWKEV 229
>GPMA_METMA (Q8PST3) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 241 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 12/83 (14%) Frame = -3 Query: 560 KKIMLEEYESRKKDKLRYRY----PRGESYLDVIQRLEP-----VIIELERQRAPVVVIS 408 K+ M E+Y + + R+ + P GES V +R P V+ LE + V++ + Sbjct: 128 KQKMEEKYGAEQVANWRWNFEPGPPEGESLKAVYERTVPYFRKKVMPALEGGKN-VLICA 186 Query: 407 HQAVLRALYSY---FADRPLREV 348 HQ+ LRAL Y +D+ +REV Sbjct: 187 HQSSLRALVKYIEDISDKDIREV 209
>RPB5_ASHGO (Q757H7) DNA-directed RNA polymerases II 24 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase II subunit 5) Length = 215 Score = 30.4 bits (67), Expect = 3.6 Identities = 22/63 (34%), Positives = 32/63 (50%) Frame = -3 Query: 560 KKIMLEEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALY 381 K I L + E K +L RY ES L IQR++PV + L +R VV I ++ Y Sbjct: 152 KHIKLSDEE---KKELLKRYRLKESQLPRIQRMDPVALYLGLKRGEVVKIIRKSETSGRY 208 Query: 380 SYF 372 + + Sbjct: 209 ASY 211
>NCAP_CCHFV (P27317) Nucleocapsid protein (Nucleoprotein)| Length = 482 Score = 30.4 bits (67), Expect = 3.6 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +1 Query: 241 TCTSDSQSMSLYLFSSTPVTPICISIMVWSGISMSGTSLKGLSAKYEYNARSTAWWD 411 + T D+Q S+Y + T C I + +S +G KGL +E NA + WD Sbjct: 52 SATDDAQKDSIYASALVEATKFCAPIYECAWVSSTGIVKKGLE-WFEKNAGTIKSWD 107
>RPB5_KLUMA (Q9P4B9) DNA-directed RNA polymerases II 24 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase II subunit 5) Length = 215 Score = 30.0 bits (66), Expect = 4.6 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = -3 Query: 536 ESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYF 372 ++ KK+ L+ RY ES L IQR++PV + L +R V+ I ++ Y+ + Sbjct: 158 DAEKKELLK-RYRLKESQLPRIQRMDPVALYLGLKRGEVIKIIRKSETSGRYASY 211
>RPB5_CANGA (Q6FQA6) DNA-directed RNA polymerases II 24 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase II subunit 5) Length = 215 Score = 30.0 bits (66), Expect = 4.6 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = -3 Query: 560 KKIMLEEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALY 381 K I L E E K +L RY ES L IQR +PV + L +R VV I ++ Y Sbjct: 152 KHIRLNEEE---KAELLKRYRLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETAGRY 208 Query: 380 SYF 372 + + Sbjct: 209 ASY 211
>LDHA_SCEUN (Q9W7L5) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 30.0 bits (66), Expect = 4.6 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SLK L + + W D+ Sbjct: 196 SVPVWSGVNVAGVSLKSLHPEMGADGDKENWKDV 229
>LDHA_ELEMC (O93542) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 30.0 bits (66), Expect = 4.6 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAW 405 S+ VWSG++++G SL+GL+ + S W Sbjct: 196 SVPVWSGLNVAGVSLQGLNPQMGTEGDSENW 226
>LDHA_CAICA (Q98SL2) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 30.0 bits (66), Expect = 4.6 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SLK L + +A W ++ Sbjct: 196 SVPVWSGVNVAGVSLKALHPELGTDADKEHWKEV 229
>LDHA_ALLMI (Q9PW06) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 30.0 bits (66), Expect = 4.6 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SLK L + +A W ++ Sbjct: 196 SVPVWSGVNVAGVSLKALHPELGTDADKEHWKEV 229
>GPMA_METAC (Q8TN93) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 248 Score = 30.0 bits (66), Expect = 4.6 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 20/74 (27%) Frame = -3 Query: 536 ESRKKDKLRYRY----------------PRGESYLDVIQRLEPV----IIELERQRAPVV 417 + +KKDK++ +Y P GES D+ +R P I + + V+ Sbjct: 131 QGKKKDKMKAKYGEEQILHWCRSFDEGPPEGESLKDIYRRAVPYFEKEIFPILQDGKNVI 190 Query: 416 VISHQAVLRALYSY 375 V +HQ LRAL + Sbjct: 191 VCAHQNSLRALIKH 204
>PPB_LYSEN (Q05205) Alkaline phosphatase precursor (EC 3.1.3.1) (APASE)| Length = 539 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +1 Query: 316 IMVWSGISMSGTSLKGLSAKYEYNARSTAWWDITTTGA 429 +M W+ S +G +L G K + + RST +D+ GA Sbjct: 462 LMAWNVSSAAGKTLTGAQVKLQVSDRSTGTYDLYRAGA 499
>DPOLA_MOUSE (P33609) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1465 Score = 29.6 bits (65), Expect = 6.1 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +1 Query: 217 GACCCAEPTCTSDSQSMSLYLFSSTPVTPICISIMV 324 G C EPTC S + + L+ + P+ P+C+ ++ Sbjct: 1348 GWLICEEPTCCSRLRRLPLHFSRNGPLCPVCMKAVL 1383
>LDHA_SCEWO (P79912) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 29.6 bits (65), Expect = 6.1 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGL 366 S+ VWSG++++G SLKGL Sbjct: 196 SVPVWSGVNVAGVSLKGL 213
>LDHA_BOVIN (P19858) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 29.6 bits (65), Expect = 6.1 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAW 405 S+ VWSG++++G SLK L + +A W Sbjct: 196 SVPVWSGVNVAGVSLKNLHPELGTDADKEQW 226
>RPB5_YEAST (P20434) DNA-directed RNA polymerases I, II, and III 27 kDa| polypeptide (EC 2.7.7.6) (ABC27) Length = 215 Score = 29.3 bits (64), Expect = 7.9 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = -3 Query: 533 SRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYF 372 S +K +L RY ES L IQR +PV + L +R VV I ++ Y+ + Sbjct: 158 SDEKRELLKRYRLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETSGRYASY 211
>LDHA_PARMG (O93543) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 330 Score = 29.3 bits (64), Expect = 7.9 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SL+GL+ + W I Sbjct: 195 SVPVWSGVNVAGVSLQGLNPQMGTEGDGENWMAI 228
>Y3910_AGRT5 (Q8U920) UPF0271 protein Atu3910/AGR_L_1871| Length = 255 Score = 29.3 bits (64), Expect = 7.9 Identities = 12/45 (26%), Positives = 28/45 (62%) Frame = -3 Query: 497 RGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYSYFADR 363 +G++ +D I+ ++P ++ + AP++ ++ +A L + FADR Sbjct: 125 QGQAVIDGIKAIDPSLVLMGLANAPILDLARKAGLAVVAEAFADR 169
>LDHA_PIG (P00339) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 29.3 bits (64), Expect = 7.9 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAW 405 S+ VWSG++++G SLK L + +A W Sbjct: 196 SVPVWSGVNVAGVSLKNLHPELGTDADKEHW 226
>LDHA_COLLI (Q9PW07) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 29.3 bits (64), Expect = 7.9 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SLK L +A W ++ Sbjct: 196 SVPVWSGVNVAGVSLKALHPDMGTDADKEHWKEV 229
>LDHA_CHICK (P00340) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 29.3 bits (64), Expect = 7.9 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 313 SIMVWSGISMSGTSLKGLSAKYEYNARSTAWWDI 414 S+ VWSG++++G SLK L +A W ++ Sbjct: 196 SVPVWSGVNVAGVSLKALHPDMGTDADKEHWKEV 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,620,452 Number of Sequences: 219361 Number of extensions: 1651829 Number of successful extensions: 4879 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 4719 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4853 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
