Clone Name | rbasd24o15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DOIAD_STRSD (Q2MF22) 2-deoxy-scyllo-inosamine dehydrogenase (EC ... | 31 | 3.3 | 2 | KAS2_STRCM (P41176) Putative polyketide beta-ketoacyl synthase 2... | 30 | 4.3 | 3 | DP87_DICDI (Q04503) Prespore protein DP87 precursor | 30 | 4.3 | 4 | DMBT1_PIG (Q4A3R3) Deleted in malignant brain tumors 1 protein p... | 30 | 5.6 | 5 | SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor | 29 | 9.6 |
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>DOIAD_STRSD (Q2MF22) 2-deoxy-scyllo-inosamine dehydrogenase (EC 1.1.1.-) (DOIA| dehydrogenase) Length = 339 Score = 30.8 bits (68), Expect = 3.3 Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = +2 Query: 380 ALHCALSDVGVGGGDHERVEGEYGIGYIL----QRRSAWYEPRGEAIASPRGSYFXAAAL 547 ALH A+S VGV G+ V G GIG +L ++R GE +A R AA L Sbjct: 148 ALH-AVSTVGVEPGERVAVLGAGGIGLMLMQVARQRGGVITTVGEPVAERRA---VAAQL 203 Query: 548 GTRTSARG 571 G RT G Sbjct: 204 GARTVTTG 211
>KAS2_STRCM (P41176) Putative polyketide beta-ketoacyl synthase 2 (EC 2.3.1.-)| (ORF 2) Length = 402 Score = 30.4 bits (67), Expect = 4.3 Identities = 26/94 (27%), Positives = 31/94 (32%) Frame = +2 Query: 200 DGKXVYPGGGDGHLARKHXXNARQLREPVLAGEHGADXXXXXXXXXXXXXXDAEGHVGGG 379 DG+ PGGG G + A R + GE G G Sbjct: 222 DGRGYVPGGGRGVVPPLERAEAAPARGAEVYGEAGP-------LARLPAPHSGRGSTRAH 274 Query: 380 ALHCALSDVGVGGGDHERVEGEYGIGYILQRRSA 481 A+ AL D G GD RV + G Y R A Sbjct: 275 AIRTALDDAGTAPGDIRRVFADGGGRYPNDRAEA 308
>DP87_DICDI (Q04503) Prespore protein DP87 precursor| Length = 555 Score = 30.4 bits (67), Expect = 4.3 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -3 Query: 252 CLRAR*PSPPPGYTSLPSTSSPQDRCTMMASRTTSR-PGIRFPCACSSAP 106 C++AR P PPP ++ SS + M+ + S RFPC C S P Sbjct: 383 CIKARPPVPPPHCSTCAELSSACNHVGMICIQVPSNCTNTRFPC-CPSHP 431
>DMBT1_PIG (Q4A3R3) Deleted in malignant brain tumors 1 protein precursor| Length = 1204 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = +2 Query: 458 YILQRRSAWYEPRGEAIASPRGSYFXAAALGTRTSARGIFSTPSYP 595 Y W+ P ASP + G TSA G FS+PSYP Sbjct: 494 YTTTPSQTWWHPTTTTAASP-----SSPCGGFLTSASGTFSSPSYP 534
>SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor| Length = 307 Score = 29.3 bits (64), Expect = 9.6 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = -3 Query: 234 PSPPPGYTSLPSTSSPQDRCTMMASRTTSRPGIRFPCACSS-APAGSP 94 P+ T+ P+T+ P TT++P PC C S P G P Sbjct: 223 PTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTPKPCGCKSCGPGGEP 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,645,402 Number of Sequences: 219361 Number of extensions: 1571690 Number of successful extensions: 5094 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4771 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5089 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)