ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd24o15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550002.1| Oryza sativa (japonica cultivar-group), mRNA Length = 687 Score = 400 bits (202), Expect = e-108 Identities = 337/383 (87%) Strand = Plus / Minus Query: 63 gaacccgccagtaccttattgagcgcgtgagcggcgatcccgctggggcagaagagcagg 122 |||||||||||||||||| | || |||||| |||||||| | ||||||||||||||| Sbjct: 668 gaacccgccagtaccttagtcagaacgtgagtcgcgatcccaattgggcagaagagcagg 609 Query: 123 cacagggaaaccgaatgcctggtctcgatgttgttcttgatgccatcatggtacacctgt 182 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 608 cacagagaaaccgaatgcctggtctctatgttgttcttgatgccgtcatggtacacctgc 549 Query: 183 cttgcggcgaagaggtcgacggcaaggangtgtatccaggcggaggcgacggtcatctcg 242 ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| Sbjct: 548 cttgcggcgaagaggtcgacggctaggaggtggatccaggcggaggcgacggtcatctcg 489 Query: 243 ctcgcaaacatgntnacaatgccaggcaactccgggagccagtacttgctggcgaacatg 302 || || ||||| | || || || | |||||| ||||||||||||||||||||||||||| Sbjct: 488 ctggcgaacatcctgacgatccccgtcaactcggggagccagtacttgctggcgaacatg 429 Query: 303 gcgcggatggtgtcgggggtccaggagaggtagagcaagtaggcgtagaggatgccgagg 362 ||||| | ||||||||| |||||||| |||||||||| |||||||||||||||||||||| Sbjct: 428 gcgcgtagggtgtcgggagtccaggataggtagagcaggtaggcgtagaggatgccgagg 369 Query: 363 gccacgtagggggcggtgctctccactgtgcgcttagtgatgttggcgttgggggcggcg 422 || ||||| || ||| |||| ||||| | ||||| |||| || ||||||||||||| || Sbjct: 368 gcgacgtacggcgcgctgctatccacggcacgcttggtgacgtcggcgttgggggcgacg 309 Query: 423 atcatgagcgtgtagaaggggag 445 | |||||| |||||||| ||||| Sbjct: 308 accatgagagtgtagaaagggag 286
>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.8), mRNA Length = 858 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 726 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 727 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 786 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 840
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117174 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 117233 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 117234 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 117293 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117294 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 117347
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118258 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 118317 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118318 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 118377 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118378 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 118431 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96898 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 96839 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 96838 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 96779 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 96778 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 96725
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118258 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 118317 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118318 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 118377 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118378 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 118431 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96898 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 96839 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 96838 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 96779 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 96778 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 96725
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118207 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 118266 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118267 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 118326 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118327 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 118380 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96843 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 96784 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 96783 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 96724 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 96723 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 96670
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509476 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 31509417 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 31509416 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 31509357 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 31509356 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 31509303 Score = 301 bits (152), Expect = 1e-78 Identities = 168/174 (96%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320074 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 27320133 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 27320134 aagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcggacct 27320193 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 27320194 cggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcacctt 27320247
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83120 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 83179 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 83180 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 83239 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 83240 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 83293
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123939 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 123880 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 123879 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 123820 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123819 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 123766 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15665 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 15606 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 15605 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 15546 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 15545 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 15492
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142473 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 142414 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 142413 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 142354 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 142353 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 142300
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95069 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 95010 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95009 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 94950 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 94949 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 94896
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43217 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 43276 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 43277 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 43336 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 43337 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 43390 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21900 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 21841 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 21840 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 21781 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 21780 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 21727
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56946 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 57005 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 57006 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 57065 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 57066 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 57119
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29133 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 29074 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 29073 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 29014 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 29013 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 28960
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269825 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 9269766 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9269765 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 9269706 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9269705 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 9269652 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229325 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 9229266 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9229265 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 9229206 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9229205 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 9229152 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165913 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 9165854 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9165853 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 9165794 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9165793 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 9165740 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057739 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 9057680 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9057679 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 9057620 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9057619 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 9057566 Score = 143 bits (72), Expect = 8e-31 Identities = 92/99 (92%) Strand = Plus / Minus Query: 465 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 524 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811 Query: 525 catacttcancgctgcagcgcttggtactcggacctcgg 563 ||||||||| ||| ||||||||||||||||| ||||||| Sbjct: 25661810 catacttcagcgccgcagcgcttggtactcgaacctcgg 25661772
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939810 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 19939751 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19939750 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 19939691 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19939690 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 19939637 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388677 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 10388618 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10388617 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 10388558 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10388557 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 10388504 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275621 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 10275680 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10275681 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 10275740 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10275741 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 10275794
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240456 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 9240515 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9240516 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 9240575 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9240576 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 9240629 Score = 151 bits (76), Expect = 3e-33 Identities = 135/154 (87%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 461 atacttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacgg 520 ||||||||||| | || || ||||| ||||||||||| ||||||| ||||||||| Sbjct: 3579711 atacttcagcgtcataacgtttggtacgagcctcgtggtaaagcaatggctagtccatat 3579770 Query: 521 ggctcatacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctct 580 ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 3579771 ggctcatacttcagcgctgcagcgcttggtactcggaccttggcttaaggcattttctct 3579830 Query: 581 accccttcttaccctgaaaaagcanggtcacctt 614 | |||||||||||||||||||| | ||||||||| Sbjct: 3579831 a-cccttcttaccctgaaaaaggagggtcacctt 3579863
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599992 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 31599933 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 31599932 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 31599873 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 31599872 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 31599819 Score = 301 bits (152), Expect = 1e-78 Identities = 168/174 (96%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411397 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 27411456 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 27411457 aagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcggacct 27411516 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 27411517 cggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcacctt 27411570
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46233 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 46292 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 46293 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 46352 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46353 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 46406
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122057 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 122116 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122117 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 122176 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122177 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 122230 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100780 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 100721 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 100720 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 100661 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 100660 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 100607
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51669 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 51728 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 51729 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 51788 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 51789 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 51842
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 272 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 271 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 212 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 211 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 158
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 492 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 491 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 432 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 431 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 378
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 688 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 687 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 628 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 627 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 574
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1472 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 1413 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1412 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 1353 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1352 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 1299
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 557 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 556 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 497 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 496 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 443
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1343 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 1284 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1283 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 1224 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1223 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 1170
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1472 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 1413 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1412 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 1353 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1352 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 1299
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 501 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 500 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 441 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 440 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 387
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 1036 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1035 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 976 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 975 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 922
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951086 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 19951027 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19951026 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 19950967 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19950966 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 19950913 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394716 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 10394657 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10394656 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 10394597 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10394596 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 10394543 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281660 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 10281719 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10281720 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 10281779 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10281780 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 10281833
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122774 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 122833 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122834 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 122893 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122894 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 122947 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101457 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 101398 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 101397 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 101338 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 101337 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 101284
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118201 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 118260 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118261 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 118320 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118321 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 118374 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96838 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 96779 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 96778 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 96719 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 96718 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 96665
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118393 gggagtatggcatcagttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 118452 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118453 aagcaatcgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 118512 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118513 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 118566 Score = 317 bits (160), Expect = 2e-83 Identities = 170/174 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96501 gggagtatggcatcagttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 96442 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 96441 aagcaatcgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 96382 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 96381 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 96328
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 301 bits (152), Expect = 1e-78 Identities = 168/174 (96%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20281 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 20340 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 20341 aagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcggacct 20400 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 20401 cggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcacctt 20454
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 301 bits (152), Expect = 1e-78 Identities = 169/174 (97%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118228 gggagtatggcatgggttacatacttca-cgccgtagcgcctggtatgagcctcgtggag 118286 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118287 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 118346 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118347 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 118400 Score = 301 bits (152), Expect = 1e-78 Identities = 169/174 (97%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 96890 gggagtatggcatgggttacatacttca-cgccgtagcgcctggtatgagcctcgtggag 96832 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 96831 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 96772 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 96771 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 96718
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 301 bits (152), Expect = 1e-78 Identities = 168/174 (96%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 5634140 gggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgtcgag 5634199 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5634200 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 5634259 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5634260 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 5634313 Score = 167 bits (84), Expect = 5e-38 Identities = 94/98 (95%) Strand = Plus / Plus Query: 517 acggggctcatacttcancgctgcagcgcttggtactcggacctcggctcgaggcatttt 576 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13417146 Query: 577 ctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||| ||||||||| Sbjct: 13417147 ctctaccccttcttaccctgaaaaagcagggtcacctt 13417184
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 301 bits (152), Expect = 1e-78 Identities = 168/174 (96%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 5634129 gggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgtcgag 5634188 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5634189 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 5634248 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5634249 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 5634302 Score = 167 bits (84), Expect = 5e-38 Identities = 94/98 (95%) Strand = Plus / Plus Query: 517 acggggctcatacttcancgctgcagcgcttggtactcggacctcggctcgaggcatttt 576 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13371420 Query: 577 ctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||| ||||||||| Sbjct: 13371421 ctctaccccttcttaccctgaaaaagcagggtcacctt 13371458
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 301 bits (152), Expect = 1e-78 Identities = 168/174 (96%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 18745 gggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgtcgag 18686 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 18685 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 18626 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 18625 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 18572
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 285 bits (144), Expect = 8e-74 Identities = 167/174 (95%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122000 gggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgtggag 122058 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122059 aagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcggacct 122118 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122119 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 122172 Score = 285 bits (144), Expect = 8e-74 Identities = 167/174 (95%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100737 gggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgtggag 100679 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 100678 aagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcggacct 100619 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 100618 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 100565
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 285 bits (144), Expect = 8e-74 Identities = 167/174 (95%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 7090 gggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgtggag 7032 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 7031 aagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcggacct 6972 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6971 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 6918
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 285 bits (144), Expect = 8e-74 Identities = 167/174 (95%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1678 gggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgtggag 1620 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1619 aagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcggacct 1560 Query: 561 cggctcgaggcattttctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1559 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctt 1506
>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full insert sequence Length = 425 Score = 250 bits (126), Expect = 5e-63 Identities = 134/137 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 78 Query: 501 aagcaattgctagtccacggggctcatacttcancgctgcagcgcttggtactcggacct 560 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 77 aagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacct 18 Query: 561 cggctcgaggcattttc 577 ||||||||||||||||| Sbjct: 17 cggctcgaggcattttc 1
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 167 bits (84), Expect = 5e-38 Identities = 94/98 (95%) Strand = Plus / Minus Query: 517 acggggctcatacttcancgctgcagcgcttggtactcggacctcggctcgaggcatttt 576 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 15834 Query: 577 ctctaccccttcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||||||||||||| ||||||||| Sbjct: 15833 ctctaccccttcttaccctgaaaaagcagggtcacctt 15796
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 151 bits (76), Expect = 3e-33 Identities = 135/154 (87%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 461 atacttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacgg 520 ||||||||||| | || || ||||| ||||||||||| ||||||| ||||||||| Sbjct: 58217 atacttcagcgtcataacgtttggtacgagcctcgtggtaaagcaatggctagtccatat 58276 Query: 521 ggctcatacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctct 580 ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 58277 ggctcatacttcagcgctgcagcgcttggtactcggaccttggcttaaggcattttctct 58336 Query: 581 accccttcttaccctgaaaaagcanggtcacctt 614 | |||||||||||||||||||| | ||||||||| Sbjct: 58337 a-cccttcttaccctgaaaaaggagggtcacctt 58369
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 151 bits (76), Expect = 3e-33 Identities = 135/154 (87%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 461 atacttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacgg 520 ||||||||||| | || || ||||| ||||||||||| ||||||| ||||||||| Sbjct: 135428 atacttcagcgtcataacgtttggtacgagcctcgtggtaaagcaatggctagtccatat 135487 Query: 521 ggctcatacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctct 580 ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 135488 ggctcatacttcagcgctgcagcgcttggtactcggaccttggcttaaggcattttctct 135547 Query: 581 accccttcttaccctgaaaaagcanggtcacctt 614 | |||||||||||||||||||| | ||||||||| Sbjct: 135548 a-cccttcttaccctgaaaaaggagggtcacctt 135580
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 149 bits (75), Expect = 1e-32 Identities = 77/78 (98%) Strand = Plus / Plus Query: 537 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 60 Query: 597 aaaaagcanggtcacctt 614 |||||||| ||||||||| Sbjct: 61 aaaaagcagggtcacctt 78
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 276 gggagccagtacttgctggcgaacatggcgcggatggtgtcgggggtccaggagaggtag 335 |||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| Sbjct: 1569166 gggagccagtacttgctggcgaacatggcgcgtagggtgtcgggagtccaggataggtag 1569225 Query: 336 agcaagtaggcgtagaggatgccgagggccacgtagggggcggtgctctccac 388 |||| |||||||||||||||||||||||| ||||| || ||| |||| ||||| Sbjct: 1569226 agcaggtaggcgtagaggatgccgagggcgacgtacggcgcgctgctatccac 1569278 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 63 gaacccgccagtaccttattgagcgcgtgagcggcgatcccgctggggcagaagagcagg 122 |||||||||||||||||| | || |||||| |||||||| | ||||||||||||||| Sbjct: 1568761 gaacccgccagtaccttagtcagaacgtgagtcgcgatcccaattgggcagaagagcagg 1568820 Query: 123 cacagggaaaccgaatgcctggtctcgatgttgttcttgatgccatcatggtacacctg 181 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1568821 cacagagaaaccgaatgcctggtctctatgttgttcttgatgccgtcatggtacacctg 1568879 Score = 103 bits (52), Expect = 7e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 183 cttgcggcgaagaggtcgacggcaaggangtgtatccaggcggaggcgacggtcatctcg 242 ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| Sbjct: 1568994 cttgcggcgaagaggtcgacggctaggaggtggatccaggcggaggcgacggtcatctcg 1569053 Query: 243 ctcgcaaacat 253 || || ||||| Sbjct: 1569054 ctggcgaacat 1569064 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 407 ggcgttgggggcggcgatcatgagcgtgtagaaggggag 445 ||||||||||||| ||| |||||| |||||||| ||||| Sbjct: 1569383 ggcgttgggggcgacgaccatgagagtgtagaaagggag 1569421
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 276 gggagccagtacttgctggcgaacatggcgcggatggtgtcgggggtccaggagaggtag 335 |||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| Sbjct: 6397 gggagccagtacttgctggcgaacatggcgcgtagggtgtcgggagtccaggataggtag 6456 Query: 336 agcaagtaggcgtagaggatgccgagggccacgtagggggcggtgctctccac 388 |||| |||||||||||||||||||||||| ||||| || ||| |||| ||||| Sbjct: 6457 agcaggtaggcgtagaggatgccgagggcgacgtacggcgcgctgctatccac 6509 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 63 gaacccgccagtaccttattgagcgcgtgagcggcgatcccgctggggcagaagagcagg 122 |||||||||||||||||| | || |||||| |||||||| | ||||||||||||||| Sbjct: 5992 gaacccgccagtaccttagtcagaacgtgagtcgcgatcccaattgggcagaagagcagg 6051 Query: 123 cacagggaaaccgaatgcctggtctcgatgttgttcttgatgccatcatggtacacctg 181 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 6052 cacagagaaaccgaatgcctggtctctatgttgttcttgatgccgtcatggtacacctg 6110 Score = 103 bits (52), Expect = 7e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 183 cttgcggcgaagaggtcgacggcaaggangtgtatccaggcggaggcgacggtcatctcg 242 ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| Sbjct: 6225 cttgcggcgaagaggtcgacggctaggaggtggatccaggcggaggcgacggtcatctcg 6284 Query: 243 ctcgcaaacat 253 || || ||||| Sbjct: 6285 ctggcgaacat 6295 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 407 ggcgttgggggcggcgatcatgagcgtgtagaaggggag 445 ||||||||||||| ||| |||||| |||||||| ||||| Sbjct: 6614 ggcgttgggggcgacgaccatgagagtgtagaaagggag 6652
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 143 bits (72), Expect = 8e-31 Identities = 92/99 (92%) Strand = Plus / Minus Query: 465 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 524 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 41597 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 41538 Query: 525 catacttcancgctgcagcgcttggtactcggacctcgg 563 ||||||||| ||| ||||||||||||||||| ||||||| Sbjct: 41537 catacttcagcgccgcagcgcttggtactcgaacctcgg 41499
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 143 bits (72), Expect = 8e-31 Identities = 92/99 (92%) Strand = Plus / Minus Query: 465 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 524 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 148068 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 148009 Query: 525 catacttcancgctgcagcgcttggtactcggacctcgg 563 ||||||||| ||| ||||||||||||||||| ||||||| Sbjct: 148008 catacttcagcgccgcagcgcttggtactcgaacctcgg 147970
>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0409B08 Length = 134673 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 63 gaacccgccagtaccttattgagcgcgtgagcggcgatcccgctggggcagaagagcagg 122 |||||||||||||||||| | || |||||| |||||||| | ||||||||||||||| Sbjct: 134409 gaacccgccagtaccttagtcagaacgtgagtcgcgatcccaattgggcagaagagcagg 134468 Query: 123 cacagggaaaccgaatgcctggtctcgatgttgttcttgatgccatcatggtacacctg 181 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 134469 cacagagaaaccgaatgcctggtctctatgttgttcttgatgccgtcatggtacacctg 134527 Score = 50.1 bits (25), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 183 cttgcggcgaagaggtcgacggcaaggangtg 214 ||||||||||||||||||||||| |||| ||| Sbjct: 134642 cttgcggcgaagaggtcgacggctaggaggtg 134673
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 139 bits (70), Expect = 1e-29 Identities = 76/78 (97%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24852 gggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 24793 Query: 501 aagcaattgctagtccac 518 ||||||| |||||||||| Sbjct: 24792 aagcaatggctagtccac 24775
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 125 bits (63), Expect = 2e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 545 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 604 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 cttgttactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1114 Query: 605 nggtcacctt 614 ||||||||| Sbjct: 1113 gggtcacctt 1104
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 123 bits (62), Expect = 7e-25 Identities = 81/88 (92%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 141355 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||| |||||| || |||||| Sbjct: 141356 tcttaccctgacaaagcagggacacctt 141383 Score = 123 bits (62), Expect = 7e-25 Identities = 81/88 (92%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 111973 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||| |||||| || |||||| Sbjct: 111972 tcttaccctgacaaagcagggacacctt 111945 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 141279 gggagtatggcatgggt----tacttcagcgccgtagcgcttggta 141320 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 112049 gggagtatggcatgggt----tacttcagcgccgtagcgcttggta 112008
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 131192 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131251 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 131252 tcttaccctgaaaaagcagggtcacctt 131279 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105686 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105627 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 105626 tcttaccctgaaaaagcagggtcacctt 105599 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/46 (91%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131175 gggagtatggcatcggttac----ttcagcgccgtagcgcctggta 131216 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/46 (91%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 105703 gggagtatggcatcggttac----ttcagcgccgtagcgcctggta 105662
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130084 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130143 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 130144 tcttaccctgaaaaagcagggtcacctt 130171 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 104551 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 104492 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 104491 tcttaccctgaaaaagcagggtcacctt 104464 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 130067 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 130108 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 104568 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 104527
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 138775 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 138834 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 138835 tcttaccctgaaaaagcagggtcacctt 138862 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 111285 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 111226 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 111225 tcttaccctgaaaaagcagggtcacctt 111198 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 138758 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138799 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111302 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111261
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 115 bits (58), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggacattggctcgaggcattttctctacccct 87781 Query: 587 tcttaccctgaaa 599 ||||||||||||| Sbjct: 87780 tcttaccctgaaa 87768
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 126284 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 126343 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 126344 tcttaccctgaaaaagcaaggtcacctt 126371 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 108638 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 108579 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 108578 tcttaccctgaaaaagcaaggtcacctt 108551 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 126284 tacttcagcgccgtagcgcctggta 126308 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 108638 tacttcagcgccgtagcgcctggta 108614
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 135009 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 135068 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 135069 tcttaccctgaaaaagcagggtcacctt 135096 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 107416 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 107357 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 107356 tcttaccctgaaaaagcagggtcacctt 107329 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 135009 tacttcagcgccgtagcgcctggta 135033 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 107416 tacttcagcgccgtagcgcctggta 107392
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 132640 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 132699 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 132700 tcttaccctgaaaaagcagggtcacctt 132727 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 105331 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 105272 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 105271 tcttaccctgaaaaagcagggtcacctt 105244 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 132623 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 132664 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 105348 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 105307
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 131185 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131244 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 131245 tcttaccctgaaaaagcagggtcacctt 131272 Score = 115 bits (58), Expect = 2e-22 Identities = 80/88 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105684 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105625 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| ||||||||| Sbjct: 105624 tcttaccctgaaaaagcagggtcacctt 105597 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/46 (91%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131168 gggagtatggcatcggttac----ttcagcgccgtagcgcctggta 131209 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/46 (91%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 105701 gggagtatggcatcggttac----ttcagcgccgtagcgcctggta 105660
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 814460 gggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgtggag 814401 Query: 501 aag 503 ||| Sbjct: 814400 aag 814398 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 492 ctcgtggagaagcaattgctagt----ccacggggctcatacttca 533 |||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 23668 gggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgtggag 23609 Query: 501 aag 503 ||| Sbjct: 23608 aag 23606
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 500 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 92591 gggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgtggag 92532 Query: 501 aag 503 ||| Sbjct: 92531 aag 92529
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 109 bits (55), Expect = 1e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||||| ||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggacattggctcgaggcattttctctacccct 89869 Query: 587 tcttaccctgaaaa 600 |||||||||||||| Sbjct: 89868 tcttaccctgaaaa 89855
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 107 bits (54), Expect = 4e-20 Identities = 79/88 (89%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130284 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 130343 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 | |||||||||||||||| || |||||| Sbjct: 130344 tattaccctgaaaaagcaggggcacctt 130371 Score = 107 bits (54), Expect = 4e-20 Identities = 79/88 (89%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105110 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 105051 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 | |||||||||||||||| || |||||| Sbjct: 105050 tattaccctgaaaaagcaggggcacctt 105023 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||| ||||||||||||| Sbjct: 130284 tacttcagcgctgtagcgcctggta 130308 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||| ||||||||||||| Sbjct: 105110 tacttcagcgctgtagcgcctggta 105086
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 101 bits (51), Expect = 3e-18 Identities = 80/89 (89%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 137996 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 138055 Query: 587 tcttaccctg-aaaaagcanggtcacctt 614 |||||||||| |||||||| ||||||||| Sbjct: 138056 tcttaccctgaaaaaagcaaggtcacctt 138084 Score = 101 bits (51), Expect = 3e-18 Identities = 80/89 (89%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 111949 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 111890 Query: 587 tcttaccctg-aaaaagcanggtcacctt 614 |||||||||| |||||||| ||||||||| Sbjct: 111889 tcttaccctgaaaaaagcaaggtcacctt 111861 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 137979 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138020 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111966 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111925
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 137921 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 137980 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 137981 tcttaccctgaaaaagcaggggcacctt 138008 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 111176 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111117 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 111116 tcttaccctgaaaaagcaggggcacctt 111089 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 137921 tacttcagcgccgtagcgcctggta 137945 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 111176 tacttcagcgccgtagcgcctggta 111152
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 99.6 bits (50), Expect = 1e-17 Identities = 79/88 (89%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130209 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130268 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || ||||||||| Sbjct: 130269 tcttaccctgaaaaa-cagggtcacctt 130295 Score = 99.6 bits (50), Expect = 1e-17 Identities = 79/88 (89%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 103236 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 103177 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || ||||||||| Sbjct: 103176 tcttaccctgaaaaa-cagggtcacctt 103150 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/46 (91%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 130192 gggagtatggcatcggttac----ttcagcgccgtagcgcctggta 130233 Score = 58.0 bits (29), Expect = 4e-05 Identities = 42/46 (91%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103253 gggagtatggcatcggttac----ttcagcgccgtagcgcctggta 103212
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 135355 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 135414 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 135415 tcttaccctgaaaaagcagggacacctt 135442 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 108202 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 108143 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 108142 tcttaccctgaaaaagcagggacacctt 108115 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 135338 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 135380 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 108219 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 108177
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 133963 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134022 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 134023 tcttaccctgaaaaagcagggacacctt 134050 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107073 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107014 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 107013 tcttaccctgaaaaagcagggacacctt 106986 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133946 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 133988 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107090 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107048
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 99.6 bits (50), Expect = 1e-17 Identities = 79/88 (89%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 2078 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 2019 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || ||||||||| Sbjct: 2018 tcttaccctgaaaaa-cagggtcacctt 1992 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2095 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 2054
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134098 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134157 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 134158 tcttaccctgaaaaagcagggacacctt 134185 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107245 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107186 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 107185 tcttaccctgaaaaagcagggacacctt 107158 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134081 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134123 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107262 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107220
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134096 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134155 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 134156 tcttaccctgaaaaagcagggacacctt 134183 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107242 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107183 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 107182 tcttaccctgaaaaagcagggacacctt 107155 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134079 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134121 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107259 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107217
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134008 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134067 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 134068 tcttaccctgaaaaagcagggacacctt 134095 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107120 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107061 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 107060 tcttaccctgaaaaagcagggacacctt 107033 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133991 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134033 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107137 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107095
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134446 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134505 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 134506 tcttaccctgaaaaagcagggacacctt 134533 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107692 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107633 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 107632 tcttaccctgaaaaagcagggacacctt 107605 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134429 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134471 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107709 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107667
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 138126 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 138185 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 138186 tcttaccctgaaaaagcaggggcacctt 138213 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 111173 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111114 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 111113 tcttaccctgaaaaagcaggggcacctt 111086 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 138109 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138150 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111190 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111149
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 133975 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134034 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 134035 tcttaccctgaaaaagcagggacacctt 134062 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107087 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107028 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 107027 tcttaccctgaaaaagcagggacacctt 107000 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133958 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134000 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107104 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107062
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||| ||||||||||||||| Sbjct: 1584 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacccct 1525 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 1524 tcttaccctgaaaaagcaggggcacctt 1497 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 1601 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 1560
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 95.6 bits (48), Expect = 2e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 534 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 475 Query: 587 tcttaccctgaaaaa 601 ||||||||||||||| Sbjct: 474 tcttaccctgaaaaa 460 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 551 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 510
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 95.6 bits (48), Expect = 2e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 140519 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 140578 Query: 587 tcttaccctgaaaaa 601 ||||||||||||||| Sbjct: 140579 tcttaccctgaaaaa 140593 Score = 95.6 bits (48), Expect = 2e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 113138 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 113079 Query: 587 tcttaccctgaaaaa 601 ||||||||||||||| Sbjct: 113078 tcttaccctgaaaaa 113064 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 140502 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 140543 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 113155 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 113114
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 95.6 bits (48), Expect = 2e-16 Identities = 77/86 (89%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||||| |||||| |||||||| || | ||||||||||||||||||||||||| Sbjct: 850 tacttcagcgctgtagcgct-ggtactcgaactttggctcgaggcattttctctacccct 792 Query: 587 tcttaccctgaaaaagcanggtcacc 612 | |||||||||||||||| || |||| Sbjct: 791 tattaccctgaaaaagcaggggcacc 766
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134717 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134776 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||| |||||| || |||||| Sbjct: 134777 tcttaccctgacaaagcagggacacctt 134804 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107913 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107854 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||| |||||| || |||||| Sbjct: 107853 tcttaccctgacaaagcagggacacctt 107826 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134700 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134742 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107930 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107888
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 3107 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3048 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||| |||||| || |||||| Sbjct: 3047 tcttaccctgacaaagcagggacacctt 3020 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 3124 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 3082
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 3352 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3293 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||| |||||| || |||||| Sbjct: 3292 tcttaccctgacaaagcagggacacctt 3265 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 3369 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 3327
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 131415 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 131474 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || || |||||| Sbjct: 131475 tcttaccctgaaaaaacagggacacctt 131502 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 105349 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 105290 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || || |||||| Sbjct: 105289 tcttaccctgaaaaaacagggacacctt 105262 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 131415 tacttcagcgccgtagcgcctggta 131439 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 105349 tacttcagcgccgtagcgcctggta 105325
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 132376 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 132435 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || || |||||| Sbjct: 132436 tcttaccctgaaaaaacagggacacctt 132463 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 106273 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 106214 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || || |||||| Sbjct: 106213 tcttaccctgaaaaaacagggacacctt 106186 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 132376 tacttcagcgccgtagcgcctggta 132400 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 106273 tacttcagcgccgtagcgcctggta 106249
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134715 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134774 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||| |||||| || |||||| Sbjct: 134775 tcttaccctgacaaagcagggacacctt 134802 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107911 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107852 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||| |||||| || |||||| Sbjct: 107851 tcttaccctgacaaagcagggacacctt 107824 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134698 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134740 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107928 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107886
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 128947 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 129006 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || || |||||| Sbjct: 129007 tcttaccctgaaaaaacaggggcacctt 129034 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 103509 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 103450 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||||||||| || || |||||| Sbjct: 103449 tcttaccctgaaaaaacaggggcacctt 103422 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 128930 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 128971 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 103526 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 103485
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/88 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||| | ||||||||| || | |||||| |||||||||||||||||| Sbjct: 1218 tacttcagcgccgtagcacctggtactcgaacattggctcggggcattttctctacccct 1159 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 |||||||||||||||||| || |||||| Sbjct: 1158 tcttaccctgaaaaagcaggggcacctt 1131 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||| ||||||| Sbjct: 1235 gggagtatggcatgggt----tacttcagcgccgtagcacctggta 1194
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 87.7 bits (44), Expect = 4e-14 Identities = 67/75 (89%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| | ||||||| |||| |||| |||||||||||||||||||| Sbjct: 5804 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 5745 Query: 587 tcttaccctgaaaaa 601 ||||||||||||||| Sbjct: 5744 tcttaccctgaaaaa 5730
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 87.7 bits (44), Expect = 4e-14 Identities = 67/75 (89%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| | ||||||| |||| |||| |||||||||||||||||||| Sbjct: 22121 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 22180 Query: 587 tcttaccctgaaaaa 601 ||||||||||||||| Sbjct: 22181 tcttaccctgaaaaa 22195
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 87.7 bits (44), Expect = 4e-14 Identities = 67/75 (89%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | | ||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 1601 tacttcagcgccgtatcgcctggtactcgaacattggctcgaggcattttctctacccct 1542 Query: 587 tcttaccctgaaaaa 601 ||||||||||||||| Sbjct: 1541 tcttaccctgaaaaa 1527 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1618 gggagtatggcatgggt----tacttcagcgccgtatcgcctggta 1577
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 85.7 bits (43), Expect = 2e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 541 agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaa 600 ||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||| || Sbjct: 1665 agcgcctggtattcgaacattggctcgaggcattttctctaccccttcttaccctgacaa 1606 Query: 601 agcanggtcacctt 614 |||| || |||||| Sbjct: 1605 agcagggacacctt 1592
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 79.8 bits (40), Expect = 1e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| | ||||||| |||| |||| ||| |||||||||||||||| Sbjct: 77396 tacttcagcgccggagcgcctcgtactcgaaccttggctggagccattttctctacccct 77455 Query: 587 tcttaccctgaaaaa 601 ||||||||||||||| Sbjct: 77456 tcttaccctgaaaaa 77470
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 77.8 bits (39), Expect = 4e-11 Identities = 79/93 (84%), Gaps = 5/93 (5%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||| ||||||| |||||||||| Sbjct: 133404 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 133463 Query: 587 tcttaccctg-----aaaaagcanggtcacctt 614 |||||||||| |||||||| ||||||||| Sbjct: 133464 tcttaccctgccctgaaaaagcaaggtcacctt 133496 Score = 77.8 bits (39), Expect = 4e-11 Identities = 79/93 (84%), Gaps = 5/93 (5%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| |||||||||||| | |||||| ||||||| |||||||||| Sbjct: 106878 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 106819 Query: 587 tcttaccct-----gaaaaagcanggtcacctt 614 ||||||||| ||||||||| ||||||||| Sbjct: 106818 tcttaccctgccctgaaaaagcaaggtcacctt 106786 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 133387 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 133428 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 106895 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 106854
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 77.8 bits (39), Expect = 4e-11 Identities = 62/70 (88%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 1043 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 984 Query: 587 tcttaccctg 596 |||||||||| Sbjct: 983 tcttaccctg 974 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/47 (89%), Gaps = 4/47 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 487 ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 1060 gggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 1018
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 75.8 bits (38), Expect = 2e-10 Identities = 75/88 (85%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 134318 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134377 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||| ||||| || || |||||| Sbjct: 134378 tcttaccctaaaaaaacaggggcacctt 134405 Score = 75.8 bits (38), Expect = 2e-10 Identities = 75/88 (85%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 107588 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107529 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||| ||||| || || |||||| Sbjct: 107528 tcttaccctaaaaaaacaggggcacctt 107501 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 134301 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 134342 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 107605 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 107564
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 75.8 bits (38), Expect = 2e-10 Identities = 75/88 (85%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 134597 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134656 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||| ||||| || || |||||| Sbjct: 134657 tcttaccctaaaaaaacaggggcacctt 134684 Score = 75.8 bits (38), Expect = 2e-10 Identities = 75/88 (85%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 107810 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107751 Query: 587 tcttaccctgaaaaagcanggtcacctt 614 ||||||||| ||||| || || |||||| Sbjct: 107750 tcttaccctaaaaaaacaggggcacctt 107723 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Plus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 134580 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 134621 Score = 50.1 bits (25), Expect = 0.009 Identities = 41/46 (89%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 441 gggagtatggcatcggttacatacttcagcgccgtagcgcctggta 486 ||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 107827 gggagtatggcatgggt----tacttcagcgccgtagcgcctggta 107786
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 73.8 bits (37), Expect = 6e-10 Identities = 63/72 (87%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 1582 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 1523 Query: 587 tcttaccctgaa 598 | |||||||||| Sbjct: 1522 ttttaccctgaa 1511 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||||||||||||||||||| Sbjct: 1582 tacttcagcgccgtagcgcctggta 1558
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 562 ggctcgaggcattttctctaccccttcttaccctgaaaaa 601 ||||||||| |||||||||||||||||||||||||||||| Sbjct: 1552 ggctcgaggtattttctctaccccttcttaccctgaaaaa 1513 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggt 485 |||||||||||||||| ||||||| Sbjct: 1587 tacttcagcgccgtagtgcctggt 1564
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 562 ggctcgaggcattttctctaccccttcttaccctgaaaa 600 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 1564 ggctcgaggtattttctctaccccttcttaccctgaaaa 1526 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggt 485 |||||||||||||||||||||||| Sbjct: 1598 tacttcagcgccgtagcgcctggt 1575
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 547 tggtactcggacctcggctcgaggcattttctctaccccttcttacc 593 |||||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 144982 tggtactcggacgttggctcaaggcattttctctaccccttcttacc 145028 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 547 tggtactcggacctcggctcgaggcattttctctaccccttcttacc 593 |||||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 113480 tggtactcggacgttggctcaaggcattttctctaccccttcttacc 113434
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 541 agcgcttggtactcggacctcggctcgaggcattttctctacc 583 |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1539 agcgcttggtactcggacgttggctcgaggcattttctctacc 1497
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/42 (95%), Gaps = 2/42 (4%) Strand = Plus / Plus Query: 562 ggctcgaggcattttctctacccctt--cttaccctgaaaaa 601 |||||||||||||||||||||||||| |||||||||||||| Sbjct: 51132 ggctcgaggcattttctctaccccttaacttaccctgaaaaa 51173 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/42 (95%), Gaps = 2/42 (4%) Strand = Plus / Minus Query: 562 ggctcgaggcattttctctacccctt--cttaccctgaaaaa 601 |||||||||||||||||||||||||| |||||||||||||| Sbjct: 38696 ggctcgaggcattttctctaccccttaacttaccctgaaaaa 38655 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctggt 485 |||||||||||||||||||||||| Sbjct: 51097 tacttcagcgccgtagcgcctggt 51120 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggt 485 |||||||||||||||||||||||| Sbjct: 38731 tacttcagcgccgtagcgcctggt 38708
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 541 agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccct 595 ||||| |||||||||||| | |||| |||| ||||||||||||||| |||||||| Sbjct: 1580 agcgcctggtactcggacgttggcttgaggtattttctctacccctccttaccct 1526 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||| ||||||||||||||| Sbjct: 1594 tacttcagcaccgtagcgcctggta 1570
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/42 (95%), Gaps = 2/42 (4%) Strand = Plus / Minus Query: 562 ggctcgaggcattttctctacccctt--cttaccctgaaaaa 601 |||||||||||||||||||||||||| |||||||||||||| Sbjct: 5624 ggctcgaggcattttctctaccccttaacttaccctgaaaaa 5583 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggt 485 |||||||||||||||||||||||| Sbjct: 5659 tacttcagcgccgtagcgcctggt 5636
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 549 gtactcggacctcggctcgaggcattttctctacccct 586 |||||||||| | ||||||||||||||||||||||||| Sbjct: 145481 gtactcggacgttggctcgaggcattttctctacccct 145444 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 549 gtactcggacctcggctcgaggcattttctctacccct 586 |||||||||| | ||||||||||||||||||||||||| Sbjct: 87370 gtactcggacgttggctcgaggcattttctctacccct 87407
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 586 ||||||| ||| | |||||||| ||||||| || ||| ||||||||||||||||||||| Sbjct: 4975 tacttcagcgccgtagcgcttg-tactcggcgcttggcccgaggcattttctctacccct 5033 Query: 587 tcttaccct 595 ||| ||||| Sbjct: 5034 tctgaccct 5042
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 541 agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttacc 593 ||||| |||||||||||| | |||||| |||||||||||||||| || ||||| Sbjct: 116571 agcgcctggtactcggacgttggctcggggcattttctctacccttttttacc 116623 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 541 agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttacc 593 ||||| |||||||||||| | |||||| |||||||||||||||| || ||||| Sbjct: 91531 agcgcctggtactcggacgttggctcggggcattttctctacccttttttacc 91479 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||| ||||||||||||||| Sbjct: 116557 tacttcagcaccgtagcgcctggta 116581 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctggta 486 ||||||||| ||||||||||||||| Sbjct: 91545 tacttcagcaccgtagcgcctggta 91521
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 585 ||||||| ||| | ||||| || ||||||||| | ||||||||||||| |||||||||| Sbjct: 137673 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 137731 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 527 tacttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 585 ||||||| ||| | ||||| || ||||||||| | ||||||||||||| |||||||||| Sbjct: 84204 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 84146 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 462 tacttcagcgccgtagcgcctg 483 |||||||||||||||||||||| Sbjct: 137673 tacttcagcgccgtagcgcctg 137694 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 462 tacttcagcgccgtagcgcctg 483 |||||||||||||||||||||| Sbjct: 84204 tacttcagcgccgtagcgcctg 84183
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 6e-04 Identities = 98/122 (80%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 479 gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcancgct 538 |||||||||||| || ||||||||||||| || | ||||||| |||||| | |||| Sbjct: 7739624 gcctggtatgagtcttgtggagaagcaatggc-----cgcggggcttatactttaacgct 7739678 Query: 539 gcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaa 598 | | |||||||| ||| || |||||| ||| |||||| |||| | ||||||||||||| Sbjct: 7739679 gtaacgcttggttctcagatatcggcttgagacattttttctatcttttcttaccctgaa 7739738 Query: 599 aa 600 || Sbjct: 7739739 aa 7739740
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 54.0 bits (27), Expect = 6e-04 Identities = 98/122 (80%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 479 gcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttcancgct 538 |||||||||||| || ||||||||||||| || | ||||||| |||||| | |||| Sbjct: 52122 gcctggtatgagtcttgtggagaagcaatggc-----cgcggggcttatactttaacgct 52176 Query: 539 gcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaa 598 | | |||||||| ||| || |||||| ||| |||||| |||| | ||||||||||||| Sbjct: 52177 gtaacgcttggttctcagatatcggcttgagacattttttctatcttttcttaccctgaa 52236 Query: 599 aa 600 || Sbjct: 52237 aa 52238
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 569 ggcattttctctacccctt-cttaccctgaaaaa 601 ||||||||||||||||||| |||||||||||||| Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaa 6004
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 569 ggcattttctctacccctt-cttaccctgaaaaa 601 ||||||||||||||||||| |||||||||||||| Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaa 6004
>ref|NM_105378.3| Arabidopsis thaliana unknown protein AT1G67080 mRNA, complete cds Length = 1022 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 111 cagaagagcaggcacagggaaaccgaatgcctggtctcgat 151 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 781 cagaagagaaggcaaagtgaaaccgaatgcctcgtctcgat 741
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Plus Query: 528 acttcancgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccctt 587 |||||| || || ||||| ||||||||| || | |||| |||| |||||||||||||||| Sbjct: 2233 acttcaacgttgtagcgcctggtactcgaacattggcttgaggtattttctctacccctt 2292
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 111 cagaagagcaggcacagggaaaccgaatgcctggtctcgat 151 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 75169 cagaagagaaggcaaagtgaaaccgaatgcctcgtctcgat 75209
>gb|BT024604.1| Arabidopsis thaliana At1g67080 mRNA, complete cds Length = 663 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 111 cagaagagcaggcacagggaaaccgaatgcctggtctcgat 151 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 602 cagaagagaaggcaaagtgaaaccgaatgcctcgtctcgat 562
>emb|BX813476.1|CNS0ADGX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 506 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 111 cagaagagcaggcacagggaaaccgaatgcctggtctcgat 151 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 282 cagaagagaaggcaaagtgaaaccgaatgcctcgtctcgat 242
>gb|AY084717.1| Arabidopsis thaliana clone 11578 mRNA, complete sequence Length = 971 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 111 cagaagagcaggcacagggaaaccgaatgcctggtctcgat 151 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 780 cagaagagaaggcaaagtgaaaccgaatgcctcgtctcgat 740
>dbj|AK175554.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-97-I04 Length = 896 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 111 cagaagagcaggcacagggaaaccgaatgcctggtctcgat 151 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 650 cagaagagaaggcaaagtgaaaccgaatgcctcgtctcgat 610
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 549 gtactcggacctcggctcgaggcattttctctaccc 584 |||||| ||| | ||||||||||||||||||||||| Sbjct: 1570 gtactcagacgttggctcgaggcattttctctaccc 1535
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 552 ctcggacctcggctcgaggcattttctctacccctt 587 ||||||| | |||||||||||||||||| ||||||| Sbjct: 126878 ctcggacgttggctcgaggcattttctccacccctt 126913 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 552 ctcggacctcggctcgaggcattttctctacccctt 587 ||||||| | |||||||||||||||||| ||||||| Sbjct: 96569 ctcggacgttggctcgaggcattttctccacccctt 96534
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 563 gctcgaggcattttctctaccccttc 588 ||||||||||||||||||||| |||| Sbjct: 1534 gctcgaggcattttctctacctcttc 1509
>gb|AY281352.1| Uncultured Acidobacteria bacterium clone 23k22 genomic sequence Length = 34695 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 gcggaggcgacggtcatctcgc 243 |||||||||||||||||||||| Sbjct: 25364 gcggaggcgacggtcatctcgc 25385
>gb|DQ233256.1| Homo sapiens complement factor H (CFH) gene, complete cds Length = 99185 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 ggcattttctctaccccttct 589 ||||||||||||||||||||| Sbjct: 5250 ggcattttctctaccccttct 5230
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 564 ctcgaggcattttctctaccccttc 588 |||||||||||||||||||| |||| Sbjct: 1518 ctcgaggcattttctctacctcttc 1494
>ref|XM_385503.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05327.1) partial mRNA Length = 1545 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 tgctggcgaacatggcgcgga 309 ||||||||||||||||||||| Sbjct: 526 tgctggcgaacatggcgcgga 506
>emb|AL049744.8|HSJ177P10 Human DNA sequence from clone RP1-177P10 on chromosome 1q31.2-32.1 Contains the HF1 gene for H factor 1 (complement) protein, complete sequence Length = 150626 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 ggcattttctctaccccttct 589 ||||||||||||||||||||| Sbjct: 117004 ggcattttctctaccccttct 117024
>gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171622 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 gcctgttctacacgtaattgg 34 ||||||||||||||||||||| Sbjct: 38818 gcctgttctacacgtaattgg 38798
>gb|AC136451.9| Medicago truncatula clone mth2-17d19, complete sequence Length = 132473 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 571 cattttctctaccccttcttaccct 595 ||||||||||| ||||||||||||| Sbjct: 32964 cattttctctatcccttcttaccct 32940
>gb|AC010751.5| Drosophila melanogaster 3L BAC RP98-9A23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181437 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 gcctgttctacacgtaattgg 34 ||||||||||||||||||||| Sbjct: 3080 gcctgttctacacgtaattgg 3100
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 gctcgaggcattttctctacc 583 ||||||||||||||||||||| Sbjct: 1518 gctcgaggcattttctctacc 1498
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 492 ctcgtggagaagcaattgctagt----ccacggggctcatacttca 533 |||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 152683 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 152638
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 492 ctcgtggagaagcaattgctagt----ccacggggctcatacttca 533 |||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 77871 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 77826
>gb|AE003525.4| Drosophila melanogaster chromosome 3L, section 60 of 83 of the complete sequence Length = 196398 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 gcctgttctacacgtaattgg 34 ||||||||||||||||||||| Sbjct: 49482 gcctgttctacacgtaattgg 49462
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 563 gctcgaggcattttctctacc 583 ||||||||||||||||||||| Sbjct: 123747 gctcgaggcattttctctacc 123767 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 gctcgaggcattttctctacc 583 ||||||||||||||||||||| Sbjct: 96119 gctcgaggcattttctctacc 96099
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 544 gcttggtactcggacctcggctcgaggcattttctctacc 583 ||||||||||||||| | |||| || |||||||| ||||| Sbjct: 114636 gcttggtactcggacattggctggaagcattttcactacc 114675 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 544 gcttggtactcggacctcggctcgaggcattttctctacc 583 ||||||||||||||| | |||| || |||||||| ||||| Sbjct: 87484 gcttggtactcggacattggctggaagcattttcactacc 87445
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 catggcgcggatggtgtcgg 318 |||||||||||||||||||| Sbjct: 523953 catggcgcggatggtgtcgg 523972
>gb|AE005840.1| Caulobacter crescentus CB15 section 166 of 359 of the complete genome Length = 12262 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 atggcgcggatggtgtcgggggtc 323 ||||||||||||||||||| |||| Sbjct: 4100 atggcgcggatggtgtcggcggtc 4077
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tgatgttggcgttgggggcg 419 |||||||||||||||||||| Sbjct: 203525 tgatgttggcgttgggggcg 203506
>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162004 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gtagaaggggagtatggcat 453 |||||||||||||||||||| Sbjct: 86986 gtagaaggggagtatggcat 87005
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 188 ggcgaagaggtcgacggcaaggangtg 214 ||||||||||||||||||| ||| ||| Sbjct: 1674167 ggcgaagaggtcgacggcatggatgtg 1674141
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gtaggcgtagaggatgccga 360 |||||||||||||||||||| Sbjct: 125451 gtaggcgtagaggatgccga 125432
>emb|AL929514.7| Zebrafish DNA sequence from clone CH211-187D9, complete sequence Length = 174473 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 gcctcgtggagaagcaattg 509 |||||||||||||||||||| Sbjct: 154229 gcctcgtggagaagcaattg 154210 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,095,305 Number of Sequences: 3902068 Number of extensions: 3095305 Number of successful extensions: 54944 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 53995 Number of HSP's gapped (non-prelim): 873 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
