ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25d12 |
|---|---|
| Clone Library Name | barley_pub |
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 97.8 bits (242), Expect = 1e-20 Identities = 40/59 (67%), Positives = 50/59 (84%) Frame = -2 Query: 429 SRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKAEKL 253 +RCS CRKRVGLTGF CRCG+L+C HRYSD+H C +DY++AA DAIA+ NPVV+A K+ Sbjct: 103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 97.4 bits (241), Expect = 1e-20 Identities = 38/62 (61%), Positives = 52/62 (83%) Frame = -2 Query: 429 SRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKAEKLD 250 +RC +C K+VG+TGF CRCG+ +C THRY + HEC+FD++ A +AIAKANPVVKA+K+D Sbjct: 107 TRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVD 166 Query: 249 KI 244 +I Sbjct: 167 RI 168
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 95.1 bits (235), Expect = 7e-20 Identities = 40/62 (64%), Positives = 48/62 (77%) Frame = -2 Query: 429 SRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKAEKLD 250 +RC CRK+VGLTGF+CRCGNL+C HRYSDKH C +DY+A A I K NPVV AEK+ Sbjct: 152 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQ 211 Query: 249 KI 244 +I Sbjct: 212 RI 213
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 95.1 bits (235), Expect = 7e-20 Identities = 40/62 (64%), Positives = 48/62 (77%) Frame = -2 Query: 429 SRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKAEKLD 250 +RC CRK+VGLTGF+CRCGNL+C HRYSDKH C +DY+A A I K NPVV AEK+ Sbjct: 152 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQ 211 Query: 249 KI 244 +I Sbjct: 212 RI 213
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 93.6 bits (231), Expect = 2e-19 Identities = 39/66 (59%), Positives = 50/66 (75%) Frame = -2 Query: 441 PKGPSRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKA 262 P+ P+RC+ CRKRVGLTGF CRCG +C +HRY + H C FD+++A + IAKANP+V A Sbjct: 96 PQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIA 155 Query: 261 EKLDKI 244 KL KI Sbjct: 156 AKLQKI 161
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 90.1 bits (222), Expect = 2e-18 Identities = 34/62 (54%), Positives = 49/62 (79%) Frame = -2 Query: 429 SRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKAEKLD 250 +RC +C K+VG+ GF C+CG+ +C +HRY +KHEC FD++ DAIAKANP+VKA+K+ Sbjct: 114 NRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173 Query: 249 KI 244 +I Sbjct: 174 RI 175
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 42.7 bits (99), Expect = 4e-04 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = -2 Query: 438 KGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVV 268 K RC C+ ++ L +CRCG ++C HR ++H+C FD+ + ++ Sbjct: 152 KSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR-----GREEAIM 206 Query: 267 KAEKLDKI*ERVGKT 223 K KLD+ +VG++ Sbjct: 207 KMVKLDR---KVGRS 218
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 42.7 bits (99), Expect = 4e-04 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = -2 Query: 438 KGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVV 268 K RC C+ ++ L +CRCG ++C HR ++H+C FD+ + ++ Sbjct: 152 KSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR-----GREEAIM 206 Query: 267 KAEKLDKI*ERVGKT 223 K KLD+ +VG++ Sbjct: 207 KMVKLDR---KVGRS 218
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 42.7 bits (99), Expect = 4e-04 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = -2 Query: 438 KGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVV 268 K RC C+ ++ L +CRCG ++C HR ++H+C FD+ + ++ Sbjct: 152 KSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR-----GREEAIM 206 Query: 267 KAEKLDKI*ERVGKT 223 K KLD+ +VG++ Sbjct: 207 KMVKLDR---KVGRS 218
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 42.0 bits (97), Expect = 7e-04 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = -2 Query: 438 KGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVV 268 K RC C+ ++ L +CRCG ++C HR ++H+C FD+ + ++ Sbjct: 151 KSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR-----GREEAIM 205 Query: 267 KAEKLDKI*ERVGKT 223 K KLD+ +VG++ Sbjct: 206 KMVKLDR---KVGRS 217
>ERBB2_CANFA (O18735) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) Length = 1259 Score = 35.0 bits (79), Expect = 0.082 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 191 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 75 S C+ A L F+H+G C L C A+V + T + P P G Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNTDTFESMPNPEG 287
>ERBB2_MESAU (Q60553) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) Length = 1254 Score = 35.0 bits (79), Expect = 0.082 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 191 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 75 S C+ A L F+H+G C L C A+V + T + P P G Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNTDTFESMPNPEG 287
>ERBB2_HUMAN (P04626) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) (Tyrosine kinase-type cell surface receptor HER2) (MLN 19) Length = 1255 Score = 35.0 bits (79), Expect = 0.082 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 191 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 75 S C+ A L F+H+G C L C A+V + T + P P G Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNTDTFESMPNPEG 287
>ERBB2_RAT (P06494) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) (Epidermal growth factor receptor-related protein) Length = 1257 Score = 31.6 bits (70), Expect = 0.91 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 191 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 75 S C+ A L F+H+G C L C A+V + T + P G Sbjct: 251 SDCL-ACLHFNHSGICELHCPALVTYNTDTFESMHNPEG 288
>ECAR_ECHCA (Q90495) Ecarin precursor (EC 3.4.24.-)| Length = 616 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 7/44 (15%) Frame = -2 Query: 414 CRKRVGLTG--FNC-----RCGNLYCATHRYSDKHECKFDYRAA 304 C K +G G F C +CG LYC + + CK DY A Sbjct: 542 CTKEIGYYGKRFPCAPQDVKCGRLYCLDNSFKKNMRCKNDYSYA 585
>PEP7_YEAST (P32609) Vacuolar segregation protein PEP7 (Protein VAC1) (Vacuolar| protein sorting 19) Length = 515 Score = 31.2 bits (69), Expect = 1.2 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = -2 Query: 438 KGPSRCSTCRKRVG--LTGFNCR-CGNLYCATH 349 KG S C TC + + + NCR CG LYC H Sbjct: 73 KGKSCCHTCGRTLNNNIGAINCRKCGKLYCRRH 105
>ERBB2_MOUSE (P70424) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) Length = 1256 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 Query: 191 SSCVFAALSFHHAGFCNLSCWAIVMHGTRASAAAPGPNG 75 S C+ A L F+H+G C L C A++ + T + P G Sbjct: 251 SDCL-ACLHFNHSGICELHCPALITYNTDTFESMLNPEG 288
>Y455_METJA (Q57897) Hypothetical protein MJ0455| Length = 193 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/79 (22%), Positives = 40/79 (50%) Frame = -2 Query: 426 RCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKAEKLDK 247 +CS C K++ TG +C+ T + ++++ + + + A + A +A +K +L++ Sbjct: 2 KCSQCNKKLCYTGKDCKKD----ITQKIIEEYKKEENLKIAEVSAYIEATYYMKKTRLEE 57 Query: 246 I*ERVGKTEGPKINLRYLV 190 I E E KI + + + Sbjct: 58 IIEFCKLMEYKKIGIAFCI 76
>HELS_METTH (O26901) Putative ski2-type helicase (EC 3.6.1.-)| Length = 690 Score = 29.6 bits (65), Expect = 3.5 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 215 PKSICATSSSCVFAALSFHHAGFCN 141 P S C + C+ A ++FHHAG N Sbjct: 278 PTSTCLKLAECLEAGIAFHHAGLFN 302
>HM14_CAEEL (P20271) Homeobox protein ceh-14| Length = 351 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 426 RCSTCRKRVGLTGFNCRCGNLYCATHRY 343 RCSTC+ +G T F R ++YC H Y Sbjct: 74 RCSTCKDELGATCF-LREDSMYCRAHFY 100
>RVXX_VIPLE (Q7T046) Coagulation factor X-activating enzyme heavy chain| precursor (EC 3.4.24.58) (VLFXA heavy chain) (Coagulation factor X-activating enzyme alpha-chain) [Contains: Coagulation factor X-activating enzyme heavy chain alternate form] Length = 612 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%) Frame = -2 Query: 414 CRKRVG----LTGFNCRCGNLYCATHRYSDKHECKFDYR 310 CRK G + +CG LYC + +K+ CK YR Sbjct: 540 CRKENGRKIPCAPQDIKCGRLYCLDNSPGNKNPCKMHYR 578
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 420 STCRKRVGLTGFNCRCGNLYCATHRYSDKHEC 325 S CR+R + RCG +C HR+ HEC Sbjct: 103 SGCRQREMMKLTCDRCGRNFCIKHRHPLDHEC 134
>DGK1_DROME (Q01583) Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase| 1) (DGK 1) (DAG kinase 1) Length = 1020 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = -2 Query: 426 RCSTCRKRV----GLTGFNCR-CGNLYCATHRYSDKHEC 325 RCS CRKR+ G+TG CR C + S K EC Sbjct: 269 RCSKCRKRIKAYHGITGLTCRWCHMMLHNRCASSVKKEC 307
>TONB_VIBCH (O52042) Protein tonB| Length = 244 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -1 Query: 439 QRPKPVQHXQKEGRAHRIQLPVREPLLRDAPLLGQARVQVRLPR 308 Q+P P + Q Q +P+L D P L A+VQ R PR Sbjct: 127 QKPAPTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPR 170
>YNP5_YEAST (P53899) Hypothetical 31.5 kDa protein in YGP1-YCK2 intergenic| region Length = 274 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -2 Query: 423 CSTCRKRVGLTGFNCR-CGNLYCATHRYSDKHECKF 319 C+ CR+ + F+C C +C+ HR + H C++ Sbjct: 18 CAYCRQ-LDFLPFHCSFCNEDFCSNHRLKEDHHCRW 52
>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor| Length = 3718 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = -2 Query: 441 PKGPSRCSTCRKRVGLTGFNC-RCGNLYCATHRYSDKHECKFDYRAA 304 P+G C+ R G G +C RC Y H Y D H C D R A Sbjct: 602 PEGCDEAGRCQCRPGFDGPHCDRCLPGY---HGYPDCHACACDPRGA 645 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,463,297 Number of Sequences: 219361 Number of extensions: 974410 Number of successful extensions: 2841 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2717 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2840 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
