Clone Name | rbasd25d11 |
---|---|
Clone Library Name | barley_pub |
>emb|Z33632.1|HVATPAX H.vulgare (Gerbel) mRNA for adenosine triphosphatase Length = 1034 Score = 1350 bits (681), Expect = 0.0 Identities = 696/700 (99%), Gaps = 1/700 (0%) Strand = Plus / Minus Query: 25 aagttcgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgtttacat 84 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 aagttcgtgcaaatagtttgtgctcggcaacaataatgaacaaataggtaatgtttacat 908 Query: 85 aagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacct 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 aagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacct 848 Query: 145 gctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaataca 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 gctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaataca 788 Query: 205 agcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaagaca 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 agcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaagaca 728 Query: 265 acttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 acttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagc 668 Query: 325 acaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggtagg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 667 acaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggcagg 608 Query: 385 tagacactatggtcaactagtatctctggctcatggacatctgcttttgatgcatattca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 tagacactatggtcaactagtatctctggctcatggacatctgcttttgatgcatattca 548 Query: 445 ttctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcggagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcggagc 488 Query: 505 agtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 agtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattc 428 Query: 565 ctgtattcatggtggttgctgctgatattgaggagctccttcattgcatcctctttcatt 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ctgtattcatggtggttgctgctgatattgaggagctccttcattgcatcctctttcatt 368 Query: 625 ttgttaaccaggtcatcctgggcctgaagcactttgatacggggaagcattcagctgcat 684 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 367 ttgttaaccaggtcatcctgggcctgaagcactttgatac-gggaagcattcagctgcat 309 Query: 685 agagtactcaattttcttncgaacatcaacctgcttctct 724 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 308 agagtactcaattttcttccgaacatcaacctgcttctct 269
>gb|U84269.1|HVU84269 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1057 Score = 1342 bits (677), Expect = 0.0 Identities = 695/700 (99%), Gaps = 1/700 (0%) Strand = Plus / Minus Query: 25 aagttcgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgtttacat 84 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 aagttcgtgcaaatagtttgtgctcggcaacaataatgaacaaataggtaatgtttacat 948 Query: 85 aagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacct 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 aagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacct 888 Query: 145 gctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaataca 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 887 gctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaataca 828 Query: 205 agcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaagaca 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 agcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaagaca 768 Query: 265 acttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 acttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagc 708 Query: 325 acaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggtagg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 707 acaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggcagg 648 Query: 385 tagacactatggtcaactagtatctctggctcatggacatctgcttttgatgcatattca 444 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 647 tagacactatggtcaactagtatctctggctcagggacatctgcttttgatgcatattca 588 Query: 445 ttctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcggagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 ttctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcggagc 528 Query: 505 agtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 agtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattc 468 Query: 565 ctgtattcatggtggttgctgctgatattgaggagctccttcattgcatcctctttcatt 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 ctgtattcatggtggttgctgctgatattgaggagctccttcattgcatcctctttcatt 408 Query: 625 ttgttaaccaggtcatcctgggcctgaagcactttgatacggggaagcattcagctgcat 684 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 407 ttgttaaccaggtcatcctgggcctgaagcactttgatac-gggaagcattcagctgcat 349 Query: 685 agagtactcaattttcttncgaacatcaacctgcttctct 724 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 348 agagtactcaattttcttccgaacatcaacctgcttctct 309
>gb|U84268.1|HVU84268 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1012 Score = 1342 bits (677), Expect = 0.0 Identities = 695/700 (99%), Gaps = 1/700 (0%) Strand = Plus / Minus Query: 25 aagttcgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgtttacat 84 |||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 aagttcctgcagatagtttgtgctcggcaacaataatgaacaaataggtaatgtttacat 948 Query: 85 aagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacct 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 aagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacct 888 Query: 145 gctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaataca 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 887 gctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaataca 828 Query: 205 agcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaagaca 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 agcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaagaca 768 Query: 265 acttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 acttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagc 708 Query: 325 acaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggtagg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 acaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggtagg 648 Query: 385 tagacactatggtcaactagtatctctggctcatggacatctgcttttgatgcatattca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 tagacactatggtcaactagtatctctggctcatggacatctgcttttgatgcatattca 588 Query: 445 ttctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcggagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 ttctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcggagc 528 Query: 505 agtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 agtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattc 468 Query: 565 ctgtattcatggtggttgctgctgatattgaggagctccttcattgcatcctctttcatt 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 ctgtattcatggtggttgctgctgatattgaggagctccttcattgcatcctctttcatt 408 Query: 625 ttgttaaccaggtcatcctgggcctgaagcactttgatacggggaagcattcagctgcat 684 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 407 ttgttaaccaggtcatcctgggcctgaagcactttgatac-gggaagcattcagctgcat 349 Query: 685 agagtactcaattttcttncgaacatcaacctgcttctct 724 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 348 agagtactcaattttcttccgaacatcaacctgcttctct 309
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA, complete cds Length = 1970 Score = 1106 bits (558), Expect = 0.0 Identities = 667/701 (95%), Gaps = 2/701 (0%) Strand = Plus / Minus Query: 25 aagttcgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgtttacat 84 |||||||||||||| ||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 1017 aagttcgtgcaaatagtttgtgctcggcgacgataatgaacaaataggtagtgtttacat 958 Query: 85 aagagggtagaatactttaaacaa-caatgttcgcaaaaccgggcagagttcggtgcacc 143 |||||| | ||||||||||||||| |||||||||||||||||||| ||||||| |||||| Sbjct: 957 aagaggatggaatactttaaacaatcaatgttcgcaaaaccgggcggagttcgttgcacc 898 Query: 144 tgctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaatac 203 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 897 tgctgggggtcaaaccagcagccattttacatagaaacagctgtaccatcaccaaaatac 838 Query: 204 aagcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaagac 263 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 837 aagtgcgcattatgccgcaacaagaagcttccggatctctggcaatttcttgcggaaaac 778 Query: 264 aacttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagccag 323 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 777 aacttcaagccttgcatcaactgtattctcaaacacaatctttccatctcgagaagccag 718 Query: 324 cacaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggtag 383 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| || Sbjct: 717 cacaacacctccatggcaaatctggccgtgctcatcgccatggctcggagaaggtggcag 658 Query: 384 gtagacactatggtcaactagtatctctggctcatggacatctgcttttgatgcatattc 443 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 657 gtagacactgtggtcaactagtatctcgggctcatggacatctgcttttgatgcatactc 598 Query: 444 attctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcggag 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 attctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcggag 538 Query: 504 cagtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagatt 563 ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| Sbjct: 537 cagtacagctggctctttcaaccgaagcaggccctgaacaacgagttcttttaacagatt 478 Query: 564 cctgtattcatggtggttgctgctgatattgaggagctccttcattgcatcctctttcat 623 | |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 477 cttgtattcatggtggttgctgctgatattcaggagttccttcattgcatcctctttcat 418 Query: 624 tttgttaaccaggtcatcctgggcctgaagcactttgatacggggaagcattcagctgca 683 ||| ||||||||||||||||||||||||||||||||||| | | |||||||||||||||| Sbjct: 417 tttattaaccaggtcatcctgggcctgaagcactttgatgc-gagaagcattcagctgca 359 Query: 684 tagagtactcaattttcttncgaacatcaacctgcttctct 724 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 358 tagagtactcaattttcttccgaacatcaacctgcttctct 318
>gb|DQ272489.1| Triticum aestivum vacuolar proton ATPase subunit E mRNA, complete cds Length = 742 Score = 892 bits (450), Expect = 0.0 Identities = 516/537 (96%), Gaps = 1/537 (0%) Strand = Plus / Minus Query: 188 accatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcggatctctggca 247 ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 742 accatcaccaaaatacaagtgcgcattatgccgcaacaagaagcttccggatctctggca 683 Query: 248 atttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatctttc 307 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 682 atttcttgcggaaaacaacttcaagccttgcatcaactgtattctcaaacacaatctttc 623 Query: 308 catctcgagaagccagcacaacacctccatggcaaatctggccgtgcttatcatcatggc 367 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 622 catctcgagaagccagcacaacacctccatggcaaatctggccgtgctcatcaccatggc 563 Query: 368 tcggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctg 427 ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 562 tcggagaaggtggcaggtagacactgtggtcaacgagtatctctggctcatggacatctg 503 Query: 428 cttttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatctt 487 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 cttttgatgcatactcattctttgctgaatgcagtacagattccacattatggtgatctt 443 Query: 488 ctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaa 547 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 442 ctttgcggcagcggagcagtacagctggctctttcaaccgaagcaggccctgaacaacga 383 Query: 548 gttctttcaacagattcctgtattcatggtggttgctgctgatattgaggagctccttca 607 ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 382 gttcttttaacagattcctgtattcatggtggttgctgctgatattcaggagttccttca 323 Query: 608 ttgcatcctctttcattttgttaaccaggtcatcctgggcctgaagcactttgatacggg 667 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | | Sbjct: 322 ttgcatcctctttcattttattaaccaggtcatcctgggcctgaagcactttgatgc-ga 264 Query: 668 gaagcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctct 724 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 263 gaagcattcagctgcatagagtactcaattttcttccgaacatcaacctgcttctct 207
>gb|AY104382.1| Zea mays PCO079851 mRNA sequence Length = 1233 Score = 406 bits (205), Expect = e-110 Identities = 427/500 (85%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 225 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 284 ||||||||| |||||||||||||||||||||||||| |||||||| || ||||| |||| Sbjct: 862 aagaagcttccggatctctggcaatttcttgcggaaaacaacttctagtcttgcgtcaag 803 Query: 285 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatggcaaat 344 |||| |||| |||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 802 tgtactctcaaacacaatctttccatctcgagaagccaatacaatacctccagagcaaaa 743 Query: 345 ctggccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtcaactag 404 |||||| || ||||| |||||| || | |||||| ||||| ||| ||| ||||| | Sbjct: 742 ctggccatgagcatcatgatggcttggggcaggtggcaggtatacatcatgatcaacaaa 683 Query: 405 tatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatgcagtac 464 ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| || Sbjct: 682 tatctctggttcatggacatctgcttttgatgcatactcatgctttgctgaatgcagcac 623 Query: 465 agattccacattatggtgatcttctttgcggcagcggagcagtacagctggctctttcaa 524 |||||||||| ||||||||| || |||||||| ||||||| ||| |||||||||||||| Sbjct: 622 tgattccacatgatggtgatcatccttgcggcaacggagcaatactgctggctctttcaa 563 Query: 525 ccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtggttgct 584 || ||||| ||||||| | || |||||||| || ||| ||||||||||||||||| Sbjct: 562 acggagcaaaccctgaatgattaggtctttcaaaaggttcttgtattcatggtggttgtg 503 Query: 585 gctgatattgaggagctccttcattgcatcctctttcattttgttaaccaggtcatcctg 644 ||||| | ||| || |||||||| ||||| |||||||||||||| || || |||||||| Sbjct: 502 gctgacaaggagaagttccttcatggcatcgtctttcattttgtttactagatcatcctg 443 Query: 645 ggcctgaagcactttgatacggggaagcattcagctgcatagagtactcaattttcttnc 704 || ||||| |||||||| | | |||||||||| |||||||||||||||||||||||| | Sbjct: 442 agcttgaagaactttgatgc-gagaagcattcaactgcatagagtactcaattttcttgc 384 Query: 705 gaacatcaacctgcttctct 724 | || ||||||||||||||| Sbjct: 383 gtacttcaacctgcttctct 364 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 ctcggcaacaataatgaacaaataggta 74 |||||| |||||||||||| |||||||| Sbjct: 1044 ctcggcgacaataatgaaccaataggta 1017
>ref|NM_192458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 301 bits (152), Expect = 2e-78 Identities = 305/355 (85%), Gaps = 1/355 (0%) Strand = Plus / Minus Query: 370 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 429 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 527 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 468 Query: 430 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 489 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 467 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 408 Query: 490 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaagt 549 |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct: 407 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctgaacgacgagt 348 Query: 550 tctttcaacagattcctgtattcatggtggttgctgctgatattgaggagctccttcatt 609 |||||||| || ||| ||||||||||||||||| ||||| | ||||| | ||| | Sbjct: 347 tctttcaaaaggttcttgtattcatggtggttgtggctgacacgcaggagttgctttgta 288 Query: 610 gcatcctctttcattttgttaaccaggtcatcctgggcctgaagcactttgatacgggga 669 |||||||||||||| ||||||| |||||||| || |||||||||||||| | | || Sbjct: 287 gcatcctctttcatggaattaaccaaatcatcctgagcttgaagcactttgatgc-gaga 229 Query: 670 agcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctct 724 ||||||||||||||||||||||||||||||||| | ||| || || ||||||||| Sbjct: 228 agcattcagctgcatagagtactcaattttctttctaacttcgacttgcttctct 174 Score = 151 bits (76), Expect = 4e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 225 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 284 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 672 aagaagcttccggatctccggtaatttcttgcggaagacaacttccagcctggcatcaag 613 Query: 285 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 tgtgttctcacacacaatctttccatctcgagaagccagcacaacacctcca 561
>dbj|AK071200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K07, full insert sequence Length = 1134 Score = 301 bits (152), Expect = 2e-78 Identities = 305/355 (85%), Gaps = 1/355 (0%) Strand = Plus / Minus Query: 370 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 429 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 727 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 668 Query: 430 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 489 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 667 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 608 Query: 490 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaagt 549 |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct: 607 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctgaacgacgagt 548 Query: 550 tctttcaacagattcctgtattcatggtggttgctgctgatattgaggagctccttcatt 609 |||||||| || ||| ||||||||||||||||| ||||| | ||||| | ||| | Sbjct: 547 tctttcaaaaggttcttgtattcatggtggttgtggctgacacgcaggagttgctttgta 488 Query: 610 gcatcctctttcattttgttaaccaggtcatcctgggcctgaagcactttgatacgggga 669 |||||||||||||| ||||||| |||||||| || |||||||||||||| | | || Sbjct: 487 gcatcctctttcatggaattaaccaaatcatcctgagcttgaagcactttgatgc-gaga 429 Query: 670 agcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctct 724 ||||||||||||||||||||||||||||||||| | ||| || || ||||||||| Sbjct: 428 agcattcagctgcatagagtactcaattttctttctaacttcgacttgcttctct 374 Score = 151 bits (76), Expect = 4e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 225 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 284 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 872 aagaagcttccggatctccggtaatttcttgcggaagacaacttccagcctggcatcaag 813 Query: 285 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 tgtgttctcacacacaatctttccatctcgagaagccagcacaacacctcca 761 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 30 cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 80 ||||| ||| ||| ||||||||| | ||||||||||||||||||| ||||| Sbjct: 1073 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 1023
>gb|BT018259.1| Zea mays clone EL01T0202A06.c mRNA sequence Length = 684 Score = 248 bits (125), Expect = 2e-62 Identities = 408/500 (81%), Gaps = 2/500 (0%) Strand = Plus / Minus Query: 225 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 284 ||||||||| |||||||||||||||||||||||||| |||||||| || | || ||| Sbjct: 539 aagaagcttccggatctctggcaatttcttgcggaaaacaacttccagtttggcgccaag 480 Query: 285 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatggcaaat 344 | | |||| ||| ||||||||||||||| |||||||| |||| ||||||| ||||| Sbjct: 479 agcactctcaaacgcaatctttccatctctagaagccaagacaatacctccagagcaaaa 420 Query: 345 ctgg-ccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtcaacta 403 |||| ||||| ||||| |||||| || | ||| || | | | ||| |||||||| | Sbjct: 419 ctggtccgtgagcatcatgatggcttggggcaggcggcaaggacacatcgtggtcaacaa 360 Query: 404 gtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatgcagta 463 ||||||||| |||||||| ||||||||||||||||| || | ||||||||||||||||| Sbjct: 359 atatctctggttcatggacctctgcttttgatgcatactcgtgctttgctgaatgcagta 300 Query: 464 cagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctctttca 523 | |||||||||| |||| ||||||| |||||||| ||||||| | || |||||||||||| Sbjct: 299 ctgattccacatgatggggatcttccttgcggcaacggagcaattcacctggctctttca 240 Query: 524 accgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtggttgc 583 | || || ||||||||||||| || |||||||| || ||||| ||||||| || || Sbjct: 239 aacggaggaagccctgaacaattagatctttcaaaagggtcctgccttcatggaggatgt 180 Query: 584 tgctgatattgaggagctccttcattgcatcctctttcattttgttaaccaggtcatcct 643 ||||| | || ||| |||||||| ||||| ||||||||||||| || | || |||| Sbjct: 179 ggctgacaaggaagagttccttcatcgcatcgcctttcattttgtttactacatcctcct 120 Query: 644 gggcctgaagcactttgatacggggaagcattcagctgcatagagtactcaattttcttn 703 | || ||||| |||||||| | | |||||||||| |||||||||| ||||||||||||| Sbjct: 119 gagcttgaagaactttgatgc-gagaagcattcaactgcatagaggactcaattttcttc 61 Query: 704 cgaacatcaacctgcttctc 723 || | |||||||||||||| Sbjct: 60 cggaattcaacctgcttctc 41
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 194 bits (98), Expect = 3e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 370 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 429 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 26808552 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 26808493 Query: 430 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 489 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 26808492 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 26808433 Query: 490 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctg 539 |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 26808432 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctg 26808383 Score = 131 bits (66), Expect = 4e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 247 aatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatcttt 306 ||||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||| Sbjct: 26809280 aatttcttgcggaagacaacttccagcctggcatcaagtgtgttctcacacacaatcttt 26809221 Query: 307 ccatctcgagaagccagcacaacacctcca 336 |||||||||||||||||||||||||||||| Sbjct: 26809220 ccatctcgagaagccagcacaacacctcca 26809191 Score = 93.7 bits (47), Expect = 8e-16 Identities = 132/159 (83%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 536 cctgaacaacaagttctttcaacagattcctgtattcatggtggttgctgctgatattga 595 ||||||| || ||||||||||| || ||| ||||||||||||||||| ||||| | | Sbjct: 26808033 cctgaacgacgagttctttcaaaaggttcttgtattcatggtggttgtggctgacacgca 26807974 Query: 596 ggagctccttcattgcatcctctttcattttgttaaccaggtcatcctgggcctgaagca 655 |||| | ||| | |||||||||||||| ||||||| |||||||| || ||||||| Sbjct: 26807973 ggagttgctttgtagcatcctctttcatggaattaaccaaatcatcctgagcttgaagca 26807914 Query: 656 ctttgatacggggaagcattcagctgcatagagtactca 694 ||||||| || | |||||||||||||||||||||||||| Sbjct: 26807913 ctttgatgcgag-aagcattcagctgcatagagtactca 26807876 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 30 cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 80 ||||| ||| ||| ||||||||| | ||||||||||||||||||| ||||| Sbjct: 26809716 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 26809666 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 atctttccatctcgagaagccagcacaac 329 |||||||||||||| ||||| |||||||| Sbjct: 6699280 atctttccatctcgggaagctagcacaac 6699308
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 194 bits (98), Expect = 3e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 370 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 429 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 44201 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 44142 Query: 430 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 489 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 44141 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 44082 Query: 490 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctg 539 |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 44081 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctg 44032 Score = 131 bits (66), Expect = 4e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 247 aatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatcttt 306 ||||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||| Sbjct: 44929 aatttcttgcggaagacaacttccagcctggcatcaagtgtgttctcacacacaatcttt 44870 Query: 307 ccatctcgagaagccagcacaacacctcca 336 |||||||||||||||||||||||||||||| Sbjct: 44869 ccatctcgagaagccagcacaacacctcca 44840 Score = 93.7 bits (47), Expect = 8e-16 Identities = 132/159 (83%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 536 cctgaacaacaagttctttcaacagattcctgtattcatggtggttgctgctgatattga 595 ||||||| || ||||||||||| || ||| ||||||||||||||||| ||||| | | Sbjct: 43682 cctgaacgacgagttctttcaaaaggttcttgtattcatggtggttgtggctgacacgca 43623 Query: 596 ggagctccttcattgcatcctctttcattttgttaaccaggtcatcctgggcctgaagca 655 |||| | ||| | |||||||||||||| ||||||| |||||||| || ||||||| Sbjct: 43622 ggagttgctttgtagcatcctctttcatggaattaaccaaatcatcctgagcttgaagca 43563 Query: 656 ctttgatacggggaagcattcagctgcatagagtactca 694 ||||||| || | |||||||||||||||||||||||||| Sbjct: 43562 ctttgatgcgag-aagcattcagctgcatagagtactca 43525 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 30 cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 80 ||||| ||| ||| ||||||||| | ||||||||||||||||||| ||||| Sbjct: 45365 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 45315
>gb|AF152600.1|AF152600 Zea mays unknown mRNA Length = 497 Score = 186 bits (94), Expect = 7e-44 Identities = 184/213 (86%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 512 ctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtatt 571 ||||||||||||| || |||||||||||||||| || |||||||| || ||| |||||| Sbjct: 497 ctggctctttcaaacggagcaagccctgaacaattagatctttcaaaaggttcttgtatt 438 Query: 572 catggtggttgctgctgatattgaggagctccttcattgcatcctctttcattttgttaa 631 ||||||||||| ||||| | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 437 catggtggttgtggctgacaaggaggagttccttcatcgcatcgtctttcattttgttta 378 Query: 632 ccaggtcatcctgggcctgaagcactttgatacggggaagcattcagctgcatagagtac 691 | || |||||||| || ||||| |||||||| | | |||||||||| ||||||||||||| Sbjct: 377 ctagatcatcctgagcttgaagaactttgatgc-gagaagcattcaactgcatagagtac 319 Query: 692 tcaattttcttncgaacatcaacctgcttctct 724 ||||||||||| || || ||||||||||||||| Sbjct: 318 tcaattttcttccgtacttcaacctgcttctct 286
>emb|AJ245933.1|BVU245933 Beta vulgaris partial mRNA for V-type H(+)-ATPase subunit E Length = 558 Score = 69.9 bits (35), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctct 724 ||||| |||||||||||||||||||||||| | |||| |||||| ||||||||| Sbjct: 206 gcattgagctgcatagagtactcaattttcctgcgaatatcaacttgcttctct 153 Score = 46.1 bits (23), Expect = 0.16 Identities = 59/71 (83%) Strand = Plus / Minus Query: 487 tctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaaca 546 ||||| |||||||| | || ||||| || |||||||| | |||||| | |||||||||| Sbjct: 389 tctttccggcagcgcaacaacacagcaggttctttcaatctaagcaaactctgaacaaca 330 Query: 547 agttctttcaa 557 || |||||||| Sbjct: 329 agctctttcaa 319
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence Length = 124828 Score = 61.9 bits (31), Expect = 3e-06 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 615 ctctttcattttgttaaccaggtcatcctgggcctgaagcactttgatacggggaagcat 674 |||||||||||| ||||||| |||||| ||||| ||||| || || | || | ||||||| Sbjct: 725 ctctttcattttattaaccacgtcatcttgggcttgaagaaccttca-accgtgaagcat 667 Query: 675 tcagctgcatagagtactc 693 ||| ||||||||||||||| Sbjct: 666 tcaactgcatagagtactc 648 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| |||||| || ||||||||||||||||| ||||||||| || ||||||||| Sbjct: 2080 gcatcaagtgtattttcaaacacaatctttccatcatgagaagccaataccacacctcca 2021
>emb|X96785.1|SOVHATP S.oleracea mRNA for vacuolar H(+)-ATPase Length = 1030 Score = 61.9 bits (31), Expect = 3e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 274 cttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacct 333 |||||||||| || ||||| |||||||| || ||||||||||||||||| || |||||| Sbjct: 713 cttgcatcaagagtgttctcaaacacaattttgccatctcgagaagccagaacgacacct 654 Query: 334 cca 336 ||| Sbjct: 653 cca 651 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttc 700 |||||||||||||| |||||||| |||||| Sbjct: 320 gcattcagctgcatggagtactctattttc 291
>emb|X92118.1|MCVATPASE M.crystallinum mRNA for vacuolar proton ATPase subunit E Length = 1070 Score = 61.9 bits (31), Expect = 3e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 668 gaagcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttc 721 |||||||| |||||||||||||||||||||||| | ||||| || || |||||| Sbjct: 305 gaagcattgagctgcatagagtactcaattttcctccgaacgtccacttgcttc 252 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Minus Query: 289 ttctcgaacacaatctttccatctcgagaagccagcacaacacc 332 ||||| ||||||||||| ||||||| |||||||| |||||||| Sbjct: 680 ttctcaaacacaatcttgccatctctagaagccataacaacacc 637
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 61.9 bits (31), Expect = 3e-06 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 615 ctctttcattttgttaaccaggtcatcctgggcctgaagcactttgatacggggaagcat 674 |||||||||||| ||||||| |||||| ||||| ||||| || || | || | ||||||| Sbjct: 22421 ctctttcattttattaaccacgtcatcttgggcttgaagaaccttca-accgtgaagcat 22479 Query: 675 tcagctgcatagagtactc 693 ||| ||||||||||||||| Sbjct: 22480 tcaactgcatagagtactc 22498 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| |||||| || ||||||||||||||||| ||||||||| || ||||||||| Sbjct: 21066 gcatcaagtgtattttcaaacacaatctttccatcatgagaagccaataccacacctcca 21125
>ref|NM_117185.3| Arabidopsis thaliana TUF (TUFF) AT4G11150 (TUF) mRNA, complete cds Length = 1057 Score = 60.0 bits (30), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctc 723 ||||| |||||||||||||| ||||| ||||| ||||||||| | |||||||| Sbjct: 356 gcatttagctgcatagagtaatcaatcttcttgcgaacatcagcttgcttctc 304 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 749 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 690 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tctttcaaccgaagcaagccctgaacaa 544 ||||||||||||||||| | |||||||| Sbjct: 509 tctttcaaccgaagcaaacactgaacaa 482
>gb|BT014457.1| Lycopersicon esculentum clone 133804F, mRNA sequence Length = 1142 Score = 60.0 bits (30), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctc 723 ||||| || ||||| ||||||||||||||||| ||||||||||| || ||||| Sbjct: 392 gcattgagttgcatggagtactcaattttcttgcgaacatcaacttgtttctc 340
>gb|AY081632.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 876 Score = 60.0 bits (30), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctc 723 ||||| |||||||||||||| ||||| ||||| ||||||||| | |||||||| Sbjct: 227 gcatttagctgcatagagtaatcaatcttcttgcgaacatcagcttgcttctc 175 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 620 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 561 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tctttcaaccgaagcaagccctgaacaa 544 ||||||||||||||||| | |||||||| Sbjct: 380 tctttcaaccgaagcaaacactgaacaa 353
>gb|AY065119.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 1033 Score = 60.0 bits (30), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctc 723 ||||| |||||||||||||| ||||| ||||| ||||||||| | |||||||| Sbjct: 356 gcatttagctgcatagagtaatcaatcttcttgcgaacatcagcttgcttctc 304 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 749 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 690 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tctttcaaccgaagcaagccctgaacaa 544 ||||||||||||||||| | |||||||| Sbjct: 509 tctttcaaccgaagcaaacactgaacaa 482
>emb|BX827529.1|CNS0A2RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 770 Score = 60.0 bits (30), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctc 723 ||||| |||||||||||||| ||||| ||||| ||||||||| | |||||||| Sbjct: 78 gcatttagctgcatagagtaatcaatcttcttgcgaacatcagcttgcttctc 26 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 471 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 412 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tctttcaaccgaagcaagccctgaacaa 544 ||||||||||||||||| | |||||||| Sbjct: 231 tctttcaaccgaagcaaacactgaacaa 204
>emb|BX826893.1|CNS0A2D0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 60.0 bits (30), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctc 723 ||||| |||||||||||||| ||||| ||||| ||||||||| | |||||||| Sbjct: 316 gcatttagctgcatagagtaatcaatcttcttgcgaacatcagcttgcttctc 264 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 709 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 650 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tctttcaaccgaagcaagccctgaacaa 544 ||||||||||||||||| | |||||||| Sbjct: 469 tctttcaaccgaagcaaacactgaacaa 442
>emb|X92117.1|ATVATPASE A.thaliana mRNA for vacuolar proton ATPase subunit E Length = 949 Score = 60.0 bits (30), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctc 723 ||||| |||||||||||||| ||||| ||||| ||||||||| | |||||||| Sbjct: 333 gcatttagctgcatagagtaatcaatcttcttgcgaacatcagcttgcttctc 281 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 726 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 667 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tctttcaaccgaagcaagccctgaacaa 544 ||||||||||||||||| | |||||||| Sbjct: 486 tctttcaaccgaagcaaacactgaacaa 459
>gb|AF165939.1|AF165939 Citrus limon vacuolar V-H+ATPase subunit E mRNA, complete cds Length = 1057 Score = 60.0 bits (30), Expect = 1e-05 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 637 tcatcctgggcctgaagcactttgatacggggaagcattcagctgcatagagtactcaat 696 |||||||| || ||||| |||||||| || | |||||||||||||||| ||||||||||| Sbjct: 382 tcatcctgagcttgaagaactttgatccgag-aagcattcagctgcatggagtactcaat 324 Query: 697 tttctt 702 ||||| Sbjct: 323 cttctt 318 Score = 52.0 bits (26), Expect = 0.003 Identities = 86/106 (81%) Strand = Plus / Minus Query: 230 gctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtat 289 |||| |||||||| || | ||| || ||||| ||||| || | || |||||||| |||| Sbjct: 789 gcttccggatctcaggaagttttttacggaacacaacatccaaccgtgcatcaagggtat 730 Query: 290 tctcgaacacaatctttccatctcgagaagccagcacaacacctcc 335 |||| | || ||||| |||||||||||||||| ||| |||||||| Sbjct: 729 tctcacatactatcttcccatctcgagaagccaccacgacacctcc 684
>dbj|AB037106.1| Citrus unshiu Cit-VATP E-1 mRNA for vacuolar H+-ATPase E subunit-1, complete cds Length = 990 Score = 60.0 bits (30), Expect = 1e-05 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 637 tcatcctgggcctgaagcactttgatacggggaagcattcagctgcatagagtactcaat 696 |||||||| || ||||| |||||||| || | |||||||||||||||| ||||||||||| Sbjct: 320 tcatcctgagcttgaagaactttgatccgag-aagcattcagctgcatggagtactcaat 262 Query: 697 tttctt 702 ||||| Sbjct: 261 cttctt 256 Score = 52.0 bits (26), Expect = 0.003 Identities = 86/106 (81%) Strand = Plus / Minus Query: 230 gctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtat 289 |||| |||||||| || | ||| || ||||| ||||| || | || |||||||| |||| Sbjct: 727 gcttccggatctcaggaagttttttacggaacacaacatccaaccgtgcatcaagggtat 668 Query: 290 tctcgaacacaatctttccatctcgagaagccagcacaacacctcc 335 |||| | || ||||| |||||||||||||||| ||| |||||||| Sbjct: 667 tctcacatactatcttcccatctcgagaagccaccacgacacctcc 622
>gb|AF282970.1|AF282970 Lycopersicon esculentum putative vacuolar proton ATPase subunit E mRNA, partial cds Length = 844 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/99 (82%), Gaps = 1/99 (1%) Strand = Plus / Minus Query: 626 tgttaaccaggtcatcctgggcctgaagcactttgatacggggaagcattcagctgcata 685 ||||||||| ||| ||||| || ||||| |||||||| || | | ||||| || ||||| Sbjct: 261 tgttaaccaagtcgtcctgagcttgaagaactttgattcgag-aggcattgagttgcatg 203 Query: 686 gagtactcaattttcttncgaacatcaacctgcttctct 724 ||||||||||| ||||| |||||||| || || |||||| Sbjct: 202 gagtactcaatcttcttgcgaacatccacttgtttctct 164 Score = 50.1 bits (25), Expect = 0.010 Identities = 82/101 (81%) Strand = Plus / Minus Query: 235 cggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcg 294 ||||||||||| | |||||| ||||| |||||||| | || ||||||| || || || Sbjct: 685 cggatctctggtagtttcttacggaacacaacttccaatctggcatcaagagtgttttca 626 Query: 295 aacacaatctttccatctcgagaagccagcacaacacctcc 335 ||||||| || |||||||||||||||| ||| || ||||| Sbjct: 625 cacacaattttcccatctcgagaagccaacaccactcctcc 585
>gb|AY220098.1| Phaseolus acutifolius vacuolar ATPase subunit E mRNA, partial cds Length = 931 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 296 acacaatctttccatctcgagaagccagcac 326 |||||||||||||||| |||||||||||||| Sbjct: 584 acacaatctttccatcacgagaagccagcac 554 Score = 42.1 bits (21), Expect = 2.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 668 gaagcattcagctgcatagagtactcaattttcttncgaa 707 ||||||||||||||||| || ||||| || ||||| |||| Sbjct: 213 gaagcattcagctgcatcgaatactcgatcttcttgcgaa 174
>gb|AF499722.1| Thellungiella halophila vacuolar ATPase subunit E-like protein mRNA, complete cds Length = 1023 Score = 48.1 bits (24), Expect = 0.041 Identities = 42/48 (87%) Strand = Plus / Minus Query: 289 ttctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 |||||| ||||||| || ||||| |||||||| | ||||||||||||| Sbjct: 690 ttctcgcacacaattttcccatcacgagaagctaacacaacacctcca 643 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 508 acagctggctctttcaaccgaagcaagccctgaacaa 544 |||| ||| ||||||||||||||||| | |||||||| Sbjct: 471 acagatggttctttcaaccgaagcaaacactgaacaa 435
>gb|DQ124070.1| Coffea arabica clone MN-SSH4-F11 mRNA sequence Length = 499 Score = 48.1 bits (24), Expect = 0.041 Identities = 72/88 (81%) Strand = Plus / Plus Query: 235 cggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcg 294 ||||||||||| | ||| | |||||| ||||| || | ||| ||||| | ||| || || Sbjct: 46 cggatctctggaagtttttggcggaacacaacatccaacctagcatcgagtgtgttttca 105 Query: 295 aacacaatctttccatctcgagaagcca 322 ||||||| ||||||||||||||||||| Sbjct: 106 cacacaatttttccatctcgagaagcca 133
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31 Length = 198301 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 45750 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 45691
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project) Length = 108598 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 73283 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 73224
>gb|AY106923.1| Zea mays PCO133385 mRNA sequence Length = 1211 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 298 acaatctttccatctcgagaagccagcacaac 329 ||||||||||||||||| ||||| |||||||| Sbjct: 805 acaatctttccatctcgggaagctagcacaac 774 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 667 ggaagcattcagctgcatagagtactcaattttctt 702 ||||||||| |||||||| ||||| ||||||||||| Sbjct: 437 ggaagcattgagctgcatcgagtaatcaattttctt 402
>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 Length = 74406 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Plus Query: 277 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 20072 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 20131
>gb|AF009338.1|AF009338 Gossypium hirsutum vacuolar H+-ATPase subunit E mRNA, complete cds Length = 989 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Minus Query: 286 gtattctcgaacacaatctttccatctcgaga 317 |||||||| |||||||| |||||||||||||| Sbjct: 655 gtattctcaaacacaatttttccatctcgaga 624 Score = 44.1 bits (22), Expect = 0.64 Identities = 45/53 (84%) Strand = Plus / Minus Query: 671 gcattcagctgcatagagtactcaattttcttncgaacatcaacctgcttctc 723 ||||| |||||||| || |||||||||||||| || | ||||| |||||||| Sbjct: 250 gcattaagctgcatcgaatactcaattttctttcggatttcaacttgcttctc 198
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 674 ttcagctgcatagagtactcaa 695 |||||||||||||||||||||| Sbjct: 118906 ttcagctgcatagagtactcaa 118927
>gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone rp23-81n4, complete sequence Length = 194818 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 674 ttcagctgcatagagtactcaa 695 |||||||||||||||||||||| Sbjct: 120912 ttcagctgcatagagtactcaa 120891
>ref|NM_105094.1| Arabidopsis thaliana VHA-E3; hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT1G64200 (VHA-E3) mRNA, complete cds Length = 714 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 231 ctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaa 283 ||||||||||||||| | ||| ||||||||| |||| || | ||| ||||||| Sbjct: 684 ctttcggatctctggaagtttattgcggaaggcaacctccaacctcgcatcaa 632
>ref|NM_188514.1| Oryza sativa (japonica cultivar-group), Ozsa8183 predicted mRNA Length = 693 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 301 atctttccatctcgagaagccagcacaac 329 |||||||||||||| ||||| |||||||| Sbjct: 596 atctttccatctcgggaagctagcacaac 568 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 508 acagctggctctttcaaccgaagcaagccctgaacaa 544 ||||||||||| ||||| || ||||||| |||||||| Sbjct: 389 acagctggctccttcaaacgcagcaagctctgaacaa 353 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 666 gggaagcattcagctgcatagagtactcaattttctt 702 |||||||||| |||||| | ||||| ||||||||||| Sbjct: 232 gggaagcattgagctgctttgagtattcaattttctt 196
>gb|BT013542.1| Lycopersicon esculentum clone 132262F, mRNA sequence Length = 936 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 296 acacaatctttccatctcgagaagccagcacaacacctcca 336 ||||||| || ||||||||||||||||| || || |||||| Sbjct: 686 acacaattttcccatctcgagaagccagtaccactcctcca 646
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 atctttccatctcgagaagccagcacaac 329 |||||||||||||| ||||| |||||||| Sbjct: 51432 atctttccatctcgggaagctagcacaac 51460
>emb|AJ538752.1|NTA538752 Nicotiana tabacum cDNA-AFLP-fragment BC43-M1-018 Length = 354 Score = 42.1 bits (21), Expect = 2.5 Identities = 69/85 (81%) Strand = Plus / Plus Query: 238 atctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaac 297 ||||| |||| ||| || ||||| |||||||| | || ||||||| ||| ||||| | Sbjct: 73 atctcgggcagttttttacggaacacaacttccaatctggcatcaagtgtgttctcacaa 132 Query: 298 acaatctttccatctcgagaagcca 322 ||||| || |||||||||||||||| Sbjct: 133 acaattttcccatctcgagaagcca 157
>dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139P14, full insert sequence Length = 1162 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 301 atctttccatctcgagaagccagcacaac 329 |||||||||||||| ||||| |||||||| Sbjct: 720 atctttccatctcgggaagctagcacaac 692 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 508 acagctggctctttcaaccgaagcaagccctgaacaa 544 ||||||||||| ||||| || ||||||| |||||||| Sbjct: 513 acagctggctccttcaaacgcagcaagctctgaacaa 477 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 666 gggaagcattcagctgcatagagtactcaattttctt 702 |||||||||| |||||| | ||||| ||||||||||| Sbjct: 356 gggaagcattgagctgctttgagtattcaattttctt 320
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 tcattttgttaaccaggtcat 640 ||||||||||||||||||||| Sbjct: 94047 tcattttgttaaccaggtcat 94067
>gb|U23139.1| Caenorhabditis elegans cosmid F13H8, complete sequence Length = 37794 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 gtggttgctgctgatattga 595 |||||||||||||||||||| Sbjct: 2353 gtggttgctgctgatattga 2372
>ref|XM_362267.1| Magnaporthe grisea 70-15 hypothetical protein (MG04712.4) partial cds Length = 1746 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 tggtggttgctgctgatattgagg 597 ||||||||| |||||||||||||| Sbjct: 1107 tggtggttgttgctgatattgagg 1084
>ref|XM_460952.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F14685g) partial mRNA Length = 3144 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 gcttttgatgcatattcatt 446 |||||||||||||||||||| Sbjct: 1808 gcttttgatgcatattcatt 1789
>gb|BC067071.1| Mus musculus RIKEN cDNA 4930519N13 gene, mRNA (cDNA clone MGC:91335 IMAGE:30615484), complete cds Length = 4222 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 634 aggtcatcctgggcctgaag 653 |||||||||||||||||||| Sbjct: 2173 aggtcatcctgggcctgaag 2192
>gb|AC148868.3| Pan troglodytes BAC clone CH251-126E24 from Y, complete sequence Length = 170533 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 59200 gaacacaatctttccatctc 59181
>gb|AY338875.1| Genista tenera isolate BG11 CYCLOIDEA-like group 1B protein gene, partial cds Length = 1371 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 caataatgaacaaataggta 74 |||||||||||||||||||| Sbjct: 599 caataatgaacaaataggta 618
>gb|AY198279.1| Peronospora alsinearum internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 797 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 tggtggttgctgctgatatt 593 |||||||||||||||||||| Sbjct: 58 tggtggttgctgctgatatt 77
>gb|AC122051.2| Mus musculus BAC clone RP24-459B17 from 18, complete sequence Length = 177747 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 ttgcatcctctttcattttgttaa 631 ||||||||||||| |||||||||| Sbjct: 135978 ttgcatcctcttttattttgttaa 135955
>gb|AC146578.2| Pan troglodytes BAC clone CH251-86G3 from Y, complete sequence Length = 188850 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 21831 gaacacaatctttccatctc 21812
>gb|AC144459.8| Medicago truncatula clone mth2-23o13, complete sequence Length = 114098 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ttaaacaacaatgttcgcaa 120 |||||||||||||||||||| Sbjct: 79709 ttaaacaacaatgttcgcaa 79690
>emb|AL357034.18| Human DNA sequence from clone RP11-560I21 on chromosome 6 Contains the 3' end of the STX7 gene for syntaxin 7, the 5' end of the MOXD1 gene for monooxygenase DBH-like 1 and two CpG islands, complete sequence Length = 127703 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 674 ttcagctgcatagagtactcaattttct 701 ||||| ||||||||| |||||||||||| Sbjct: 62903 ttcagttgcatagaggactcaattttct 62930
>gb|AY061695.1| Russula nigricans 217RUF24 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S large subunit ribosomal RNA gene, partial sequence Length = 693 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 aagccagcacaacacctcca 336 |||||||||||||||||||| Sbjct: 483 aagccagcacaacacctcca 464
>emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chromosome 6 Contains a serine palmitoyltransferase long chain base subunit 1 (SPTLC1) pseudogene, complete sequence Length = 131995 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 ataagagggtagaatactttaaacaaca 110 |||||||| ||||| ||||||||||||| Sbjct: 39388 ataagaggatagaaaactttaaacaaca 39361
>emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chromosome 9p21.2-23 Contains the 3' end of a novel gene (FLJ20276), the 5' end of the SH3GL2 gene for SH3-domain GRB2-like 2 (CNSA2, SH3P4, EEN-B1, SH3D2A), a poly(A)-binding protein pseudogene and a CpG Island, complete sequence Length = 154621 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 tctcgaacacaatctttccatctc 313 |||||| ||||||||||||||||| Sbjct: 19861 tctcgagcacaatctttccatctc 19884
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 tctttgctgaatgcagtacagatt 469 |||||||||||||||||| ||||| Sbjct: 2828535 tctttgctgaatgcagtatagatt 2828558
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 gcttttgatgcatattcatt 446 |||||||||||||||||||| Sbjct: 1177214 gcttttgatgcatattcatt 1177233
>emb|CR762461.7| Zebrafish DNA sequence from clone DKEY-32H6 in linkage group 13, complete sequence Length = 86411 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 603 cttcattgcatcctctttcatttt 626 ||||| |||||||||||||||||| Sbjct: 77755 cttcaatgcatcctctttcatttt 77732
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 atcaccaaaatacaagcacg 210 |||||||||||||||||||| Sbjct: 1522379 atcaccaaaatacaagcacg 1522398
>emb|CR556722.7| Zebrafish DNA sequence from clone CH211-195N12 in linkage group 13, complete sequence Length = 205873 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 603 cttcattgcatcctctttcatttt 626 ||||| |||||||||||||||||| Sbjct: 70636 cttcaatgcatcctctttcatttt 70613
>emb|AL808125.11| Mouse DNA sequence from clone RP23-193L22 on chromosome 2, complete sequence Length = 236619 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 aggtcatcctgggcctgaag 653 |||||||||||||||||||| Sbjct: 119514 aggtcatcctgggcctgaag 119495
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 13153408 gaacacaatctttccatctc 13153389 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 4746066 gaacacaatctttccatctc 4746085 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 1090748 gaacacaatctttccatctc 1090767
>ref|NM_062850.2| Caenorhabditis elegans F13H8.5 (F13H8.5) mRNA, complete cds Length = 1808 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 gtggttgctgctgatattga 595 |||||||||||||||||||| Sbjct: 390 gtggttgctgctgatattga 371
>emb|BX826920.1|CNS0A38B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 731 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tctttcaaccgaagcaagccctgaacaa 544 ||||||||||||||||| | |||||||| Sbjct: 166 tctttcaaccgaagcaaacactgaacaa 139
>gb|AC149094.4| Pan troglodytes BAC clone CH251-268E10 from chromosome y, complete sequence Length = 175247 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 116026 gaacacaatctttccatctc 116045
>gb|AC148874.4| Pan troglodytes BAC clone CH251-429C12 from chromosome y, complete sequence Length = 168193 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 19880 gaacacaatctttccatctc 19899
>gb|AC156943.1| Pan troglodytes BAC clone CH251-607J5 from chromosome y, complete sequence Length = 193730 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 11954 gaacacaatctttccatctc 11935
>gb|BT004242.1| Arabidopsis thaliana clone RAFL15-22-H20 (R20661) Length = 1896 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 caatctttccatctcgagaa 318 |||||||||||||||||||| Sbjct: 755 caatctttccatctcgagaa 774
>ref|XM_230778.3| PREDICTED: Rattus norvegicus similar to KIAA0980 protein (predicted) (LOC311529), mRNA Length = 5358 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 634 aggtcatcctgggcctgaag 653 |||||||||||||||||||| Sbjct: 3146 aggtcatcctgggcctgaag 3165
>dbj|AB076987.1| Cytisus racemosus CrCYC2 gene, partial cds Length = 453 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 caataatgaacaaataggta 74 |||||||||||||||||||| Sbjct: 270 caataatgaacaaataggta 289
>emb|AM113962.1| Russula nigricans 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 25S rRNA gene (partial), specimen voucher MC01-511 Length = 629 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 aagccagcacaacacctcca 336 |||||||||||||||||||| Sbjct: 453 aagccagcacaacacctcca 434
>emb|AL355835.3|CNS05TCP Human chromosome 14 DNA sequence BAC R-196N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172374 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 621 cattttgttaaccaggtcatcctg 644 |||||||||||||||| ||||||| Sbjct: 76244 cattttgttaaccaggacatcctg 76267
>emb|AL161751.3|CNS01RHG Human chromosome 14 DNA sequence BAC R-96D24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184692 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 621 cattttgttaaccaggtcatcctg 644 |||||||||||||||| ||||||| Sbjct: 112399 cattttgttaaccaggacatcctg 112422
>gb|AC159650.5| Pan troglodytes BAC clone CH251-379D1 from chromosome y, complete sequence Length = 214370 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gaacacaatctttccatctc 313 |||||||||||||||||||| Sbjct: 148386 gaacacaatctttccatctc 148367
>ref|NM_207204.1| Mus musculus RIKEN cDNA 4930519N13 gene (4930519N13Rik), mRNA Length = 4222 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 634 aggtcatcctgggcctgaag 653 |||||||||||||||||||| Sbjct: 2173 aggtcatcctgggcctgaag 2192 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,355,890 Number of Sequences: 3902068 Number of extensions: 6355890 Number of successful extensions: 117273 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116898 Number of HSP's gapped (non-prelim): 353 length of query: 724 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 701 effective length of database: 17,143,297,704 effective search space: 12017451690504 effective search space used: 12017451690504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)