>AL1A3_RAT (Q8K4D8) Aldehyde dehydrogenase 1A3 (EC 1.2.1.5) (Aldehyde|
           dehydrogenase 6) (Retinaldehyde dehydrogenase 3)
           (RALDH-3)
          Length = 512

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 49  GRNPCIIAADHTXVQAQHCFFALIFAPPLQCMXXSS 156
           GRNPCI+ AD     A  C    +F    QC   +S
Sbjct: 283 GRNPCIVCADADLDLAVECAHQGVFFNQGQCCTAAS 318

>JUN_SERCA (P54864) Transcription factor AP-1 (Proto-oncogene c-jun)|
          Length = 314

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +3

Query: 51  AEPMHNCSRPYXGAGPALFFRTHLRSTPPMH---XXFQRRATRSSPSXEANS 197
           A+P+ +   P      +  F T L S PP++     F   A  S+P+  ANS
Sbjct: 134 AQPVTSGMAPVSSMAGSTSFNTSLHSEPPVYANLSNFNPNALSSAPNYNANS 185

>MURG_GLUOX (Q5FUJ5) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 365

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 18  LAAKPSNLGNRAEPMHNCSRPYXGAGPALFFRTHLRS 128
           L + P  L N A+  H C+RP+  A  A    + LRS
Sbjct: 329 LFSHPEKLENAAKAAHLCARPHAAAKVADLIESALRS 365


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,410,023
Number of Sequences: 219361
Number of extensions: 590062
Number of successful extensions: 1274
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)