>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein
           (wrsi5-1) mRNA, complete cds
          Length = 608

 Score =  579 bits (292), Expect = e-162
 Identities = 379/407 (93%), Gaps = 2/407 (0%)
 Strand = Plus / Minus

                                                                       
Query: 68  tacatattgttggccgtatagcacggcccacacacaaacatagcaacacgatgactgctc 127
           ||||||||||||||||||||||||| |||||| | || |||||   | | ||||||||||
Sbjct: 477 tacatattgttggccgtatagcacgacccacagagaagcatagg--cgccatgactgctc 420

                                                                       
Query: 128 atctcatctgagctttattctaggcggcacacctcgtccgagcctgaagccctgaagcga 187
           ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||  ||
Sbjct: 419 atctcatctgagctttattttaggcggcacccctcgtctgagactgaagccctgaacgga 360

                                                                       
Query: 188 tcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatgtcggcgca 247
           |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 359 tcagtgctttttgcatggcccgccgcaggtgccatcgacggtgctcttcatgtcggcgca 300

                                                                       
Query: 248 gcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagcccttggggca 307
            |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 299 ccggaacgtcttgtgagggctgggcgtcaccacgcggcaggccgagcagcccttggggca 240

                                                                       
Query: 308 ctgggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgcagca 367
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 239 ctgggggtgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagca 180

                                                                       
Query: 368 cttggggaagaagtcggcgttaacgtgggagaggatccccatgaccaggacggcctggag 427
           ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 179 cttggggaagaagtcggcgttcacgtgtgagaggatccccatgaccaggacggcctggag 120

                                                          
Query: 428 gatcaggatcgccgcgagcttggtgctcttcatggctgccgatgaac 474
           ||||||||||||||||||||||||||||||||||  ||| |||||||
Sbjct: 119 gatcaggatcgccgcgagcttggtgctcttcatgcttgctgatgaac 73

>emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor
          Length = 498

 Score =  315 bits (159), Expect = 7e-83
 Identities = 257/289 (88%), Gaps = 3/289 (1%)
 Strand = Plus / Minus

                                                                       
Query: 183 agcgatcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatgtcg 242
           |||||||||| ||| |||||||| || |||||||||||||||||||||   |||||||||
Sbjct: 286 agcgatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcg 227

                                                                       
Query: 243 gcgcagcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagcccttg 302
           |||||||||||||||| |   ||| ||| ||||||||||||||| || ||||||||  ||
Sbjct: 226 gcgcagcggaacgtctgg---gggttcgtggtcaccacgcggcacgccgagcagccggtg 170

                                                                       
Query: 303 gggcactgggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttg 362
           |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 169 gggcactgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttg 110

                                                                       
Query: 363 cagcacttggggaagaagtcggcgttaacgtgggagaggatccccatgaccaggacggcc 422
           |||||| |||||||  || ||||||| ||||| |||||||  ||||||||||||||||||
Sbjct: 109 cagcacgtggggaaatagacggcgttcacgtgcgagaggactcccatgaccaggacggcc 50

                                                            
Query: 423 tggaggatcaggatcgccgcgagcttggtgctcttcatggctgccgatg 471
           ||||||||||| ||||||||||||||||||| |||||||| ||| ||||
Sbjct: 49  tggaggatcagaatcgccgcgagcttggtgcccttcatggttgctgatg 1

>gb|L11882.1|WHTWALI5A Triticum aestivum protein of unknown function (wali5) mRNA,
           complete cds
          Length = 520

 Score =  295 bits (149), Expect = 7e-77
 Identities = 250/283 (88%), Gaps = 3/283 (1%)
 Strand = Plus / Minus

                                                                       
Query: 180 tgaagcgatcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatg 239
           |||| |||||||| ||| ||||| || ||||||||||||||||||||||||   ||||| 
Sbjct: 350 tgaaccgatcagtacttcttgcagggtccaccgcaggtgccgtcgacggtggatttcata 291

                                                                       
Query: 240 tcggcgcagcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagccc 299
           || ||||||||  || | | |   |||||||  | |||||||||||| || |||||||||
Sbjct: 290 tccgcgcagcgccacatttcg---gggctcgtcgacaccacgcggcacgccgagcagccc 234

                                                                       
Query: 300 ttggggcactgggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttg 359
           | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tggggacacttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttg 174

                                                                       
Query: 360 ttgcagcacttggggaagaagtcggcgttaacgtgggagaggatccccatgaccaggacg 419
           ||||||||||||||||| || |||||||| ||||| |||||||  |||||||||||||||
Sbjct: 173 ttgcagcacttggggaaaaaatcggcgttcacgtgtgagaggagtcccatgaccaggacg 114

                                                      
Query: 420 gcctggaggatcaggatcgccgcgagcttggtgctcttcatgg 462
           |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 113 gcctggaggatcaggatcgccgcgagcttggtgcccttcatgg 71



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 10  caacaagcaacaccagctttttctcgagag 39
           ||||||||||||||| ||||||||||||||
Sbjct: 513 caacaagcaacaccaactttttctcgagag 484

>gb|L28009.1|WHTWALIA Triticum aestivum (wali6) mRNA, complete cds
          Length = 585

 Score =  117 bits (59), Expect = 3e-23
 Identities = 133/157 (84%), Gaps = 3/157 (1%)
 Strand = Plus / Minus

                                                                       
Query: 304 ggcactgggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgc 363
           |||||| ||||  |||||||||||||||  || ||||||||||| |||||||||||| ||
Sbjct: 229 ggcacttggggccggcgtcgtcgcagaccacggcccccgagaagaacctgcagttgtcgc 170

                                                                       
Query: 364 agcacttggggaagaagtcggcgttaacgtgggagaggatccccatgaccaggacggcct 423
           |||| || |||||    ||||||||  | || |||||||| |||||||||||||||||||
Sbjct: 169 agcatttcgggaac---tcggcgttcgcctgtgagaggattcccatgaccaggacggcct 113

                                                
Query: 424 ggaggatcaggatcgccgcgagcttggtgctcttcat 460
           |||| |||||||||||| ||||| || | ||||||||
Sbjct: 112 ggagaatcaggatcgccacgagcgtgctactcttcat 76

>gb|L11881.1|WHTWALI3A Triticum aestivum protein of unknown function (wali3) mRNA,
           complete cds
          Length = 564

 Score =  109 bits (55), Expect = 8e-21
 Identities = 114/133 (85%), Gaps = 3/133 (2%)
 Strand = Plus / Minus

                                                                       
Query: 304 ggcactgggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgc 363
           |||||| ||||  |||||| ||||||||  || ||||||||||| |||||||||||| ||
Sbjct: 208 ggcacttggggccggcgtcatcgcagaccacggcccccgagaagaacctgcagttgtcgc 149

                                                                       
Query: 364 agcacttggggaagaagtcggcgttaacgtgggagaggatccccatgaccaggacggcct 423
           ||||||||||   ||| ||||||||  | || |||||||| |||||||||||||||||||
Sbjct: 148 agcacttggg---gaactcggcgttcgcctgtgagaggattcccatgaccaggacggcct 92

                        
Query: 424 ggaggatcaggat 436
           | |||||||||||
Sbjct: 91  gaaggatcaggat 79

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                           
Query: 402     atccccatgaccaggacggcctggaggatcaggatcgccgcgagcttggtgctcttcatg 461
               |||||||||||||||||||||||||| | ||||||| ||  |||| || |||||||||||
Sbjct: 1757672 atccccatgaccaggacggcctggagaaccaggatcaccatgagcgtgctgctcttcatg 1757731

                 
Query: 462     gc 463
               ||
Sbjct: 1757732 gc 1757733

>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504H10
          Length = 143515

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                          
Query: 402    atccccatgaccaggacggcctggaggatcaggatcgccgcgagcttggtgctcttcatg 461
              |||||||||||||||||||||||||| | ||||||| ||  |||| || |||||||||||
Sbjct: 100015 atccccatgaccaggacggcctggagaaccaggatcaccatgagcgtgctgctcttcatg 100074

                
Query: 462    gc 463
              ||
Sbjct: 100075 gc 100076

>ref|NM_184249.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 402 atccccatgaccaggacggcctggaggatcaggatcgccgcgagcttggtgctcttcat 460
           |||||||||||||||||||||||||| | ||||||| ||  |||| || ||||||||||
Sbjct: 59  atccccatgaccaggacggcctggagaaccaggatcaccatgagcgtgctgctcttcat 1

>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 394   gggagaggatccccatgaccaggacggcctggagga 429
             |||||||||| ||||||||||||| |||||||||||
Sbjct: 71845 gggagaggattcccatgaccaggatggcctggagga 71810

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 395      ggagaggatccccatgaccagga 417
                |||||||||||||||||||||||
Sbjct: 25930540 ggagaggatccccatgaccagga 25930562

>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 395   ggagaggatccccatgaccagga 417
             |||||||||||||||||||||||
Sbjct: 85638 ggagaggatccccatgaccagga 85660

>dbj|AK070101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044I16, full
           insert sequence
          Length = 2261

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 395 ggagaggatccccatgaccagga 417
           |||||||||||||||||||||||
Sbjct: 840 ggagaggatccccatgaccagga 818

>emb|AL358787.12| Human DNA sequence from clone RP11-181F12 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 118034

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     attcaacaagcaacaccagct 27
             |||||||||||||||||||||
Sbjct: 45438 attcaacaagcaacaccagct 45458

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 418     cggcctggaggatcaggatcgccgc 442
               |||| ||||||||||||||||||||
Sbjct: 1946720 cggcgtggaggatcaggatcgccgc 1946744

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    tgccgtcgacggtgctcttca 237
              |||||||||||||||||||||
Sbjct: 634922 tgccgtcgacggtgctcttca 634902

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 352     tgcagttgttgcagcacttg 371
               ||||||||||||||||||||
Sbjct: 2027872 tgcagttgttgcagcacttg 2027891

>ref|NM_001040330.1| Danio rerio zgc:136662 (zgc:136662), mRNA
          Length = 2659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  gcaggtgccgtcgacggtgc 231
            ||||||||||||||||||||
Sbjct: 1389 gcaggtgccgtcgacggtgc 1408

>gb|AC115055.9| Mus musculus chromosome 3, clone RP24-346I12, complete sequence
          Length = 204367

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    cacacacaaacatagcaaca 115
             ||||||||||||||||||||
Sbjct: 91873 cacacacaaacatagcaaca 91892

>ref|XM_753018.1| Ustilago maydis 521 hypothetical protein (UM01964.1) partial mRNA
          Length = 1812

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 tggtgctcttcatggctgcc 467
           ||||||||||||||||||||
Sbjct: 248 tggtgctcttcatggctgcc 267

>gb|AC117230.3| Mus musculus BAC clone RP23-385F15 from 16, complete sequence
          Length = 184556

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tttattcaacaagcaacacc 23
             ||||||||||||||||||||
Sbjct: 83217 tttattcaacaagcaacacc 83198

>ref|NM_001012370.1| Danio rerio exostoses (multiple) 1c (ext1c), mRNA
          Length = 2214

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  gcaggtgccgtcgacggtgc 231
            ||||||||||||||||||||
Sbjct: 1137 gcaggtgccgtcgacggtgc 1156

>gb|BC115216.1| Danio rerio exostoses (multiple) 1c, mRNA (cDNA clone MGC:136662
            IMAGE:8000407), complete cds
          Length = 2659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  gcaggtgccgtcgacggtgc 231
            ||||||||||||||||||||
Sbjct: 1389 gcaggtgccgtcgacggtgc 1408

>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ctgctcatctcatctgagct 141
             ||||||||||||||||||||
Sbjct: 86150 ctgctcatctcatctgagct 86131

>ref|XM_680169.1| PREDICTED: Danio rerio similar to EXT1c (LOC572763), partial mRNA
          Length = 240

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gcaggtgccgtcgacggtgc 231
           ||||||||||||||||||||
Sbjct: 117 gcaggtgccgtcgacggtgc 136

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 195     tttttgcatgggccaccgca 214
               ||||||||||||||||||||
Sbjct: 1357636 tttttgcatgggccaccgca 1357655

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    tcatgtcggcgcagcggaac 254
              ||||||||||||||||||||
Sbjct: 807692 tcatgtcggcgcagcggaac 807673

>dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, map 22, complete
              sequences
          Length = 168017

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    ggggcactgggggtgggcgt 321
              ||||||||||||||||||||
Sbjct: 156639 ggggcactgggggtgggcgt 156620

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  tcatgtcggcgcagcggaac 254
            ||||||||||||||||||||
Sbjct: 8347 tcatgtcggcgcagcggaac 8366

>emb|AL954242.1|PTB109N16 Pan troglodytes chromosome 22 BAC PTB-109N16, complete sequence
          Length = 190477

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   ggggcactgggggtgggcgt 321
             ||||||||||||||||||||
Sbjct: 61465 ggggcactgggggtgggcgt 61446

>gb|AY734457.1| Danio rerio EXT1c mRNA, complete cds
          Length = 2214

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  gcaggtgccgtcgacggtgc 231
            ||||||||||||||||||||
Sbjct: 1137 gcaggtgccgtcgacggtgc 1156

>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364
          Length = 526707

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 442    cgagcttggtgctcttcatggctg 465
              |||||||||| |||||||||||||
Sbjct: 158334 cgagcttggtcctcttcatggctg 158311

>gb|AC058786.24| Mus musculus strain C57BL/6J chromosome 4 clone rp23-117o7, complete
             sequence
          Length = 209737

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    gcacggcccacacacaaaca 107
             ||||||||||||||||||||
Sbjct: 97271 gcacggcccacacacaaaca 97290

>emb|AL732476.12| Mouse DNA sequence from clone RP23-131A6 on chromosome 4, complete
            sequence
          Length = 194554

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   gcacggcccacacacaaaca 107
            ||||||||||||||||||||
Sbjct: 8245 gcacggcccacacacaaaca 8226


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,535,827
Number of Sequences: 3902068
Number of extensions: 3535827
Number of successful extensions: 71536
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71229
Number of HSP's gapped (non-prelim): 304
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)