Clone Name | rbasd25c23 |
---|---|
Clone Library Name | barley_pub |
>gb|AC111106.10| Mus musculus chromosome 3, clone RP23-193O12, complete sequence Length = 202749 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 tctccaagctgaccaatacaatct 141 ||||||||||||||||| |||||| Sbjct: 156179 tctccaagctgaccaattcaatct 156202
>emb|AL445205.14| Human DNA sequence from clone RP11-24J23 on chromosome 1 Contains a novel gene (FLJ38972), the 3' end of the ROR1 gene for receptor tyrosine kinase-like orphan receptor 1, the 5' end of gene MGC35130 and a CpG island, complete sequence Length = 115936 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccaagctgaccaatacaatc 140 |||||||||||||||||||| Sbjct: 90559 ccaagctgaccaatacaatc 90540
>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence Length = 189590 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 acaaatgatgttggatcaaaatct 120 |||||||||||||||| ||||||| Sbjct: 64749 acaaatgatgttggataaaaatct 64726
>dbj|AB225186.1| Aspergillus oryzae cDNA, contig sequence: AoEST2038 Length = 976 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 tgttggatcaaaatctccaagctgacca 132 ||||||||||| ||||||||||| |||| Sbjct: 222 tgttggatcaacatctccaagctaacca 249
>gb|AC112174.2| Homo sapiens chromosome 5 clone CTD-2384D5, complete sequence Length = 19885 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 acaaatgatgttggatcaaaatct 120 |||||||||||||||| ||||||| Sbjct: 3093 acaaatgatgttggataaaaatct 3116
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 tgttggatcaaaatctccaagctgacca 132 ||||||||||| ||||||||||| |||| Sbjct: 969632 tgttggatcaacatctccaagctaacca 969659
>gb|AC154453.2| Mus musculus BAC clone RP24-173C8 from 9, complete sequence Length = 208235 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gacaaatgatgttggatcaa 115 |||||||||||||||||||| Sbjct: 152696 gacaaatgatgttggatcaa 152715
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 atgttggatcaaaatctccaagct 127 |||||||||||| ||||||||||| Sbjct: 87627 atgttggatcaatatctccaagct 87650 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,484,494 Number of Sequences: 3902068 Number of extensions: 1484494 Number of successful extensions: 107270 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107237 Number of HSP's gapped (non-prelim): 33 length of query: 207 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 185 effective length of database: 17,147,199,772 effective search space: 3172231957820 effective search space used: 3172231957820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)