ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25c16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA 672 0.0
2gb|AF498268.1| Haynaldia villosa clone kong28 mRNA 654 0.0
3ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group... 210 3e-51
4ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group... 210 3e-51
5ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group... 210 3e-51
6ref|XM_468415.1| Oryza sativa (japonica cultivar-group), mRNA 210 3e-51
7gb|AY346465.1| Oryza sativa (indica cultivar-group) putative bro... 210 3e-51
8dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
9dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
10dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
11dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
12dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
13dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
14gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planth... 196 4e-47
15gb|AY112171.1| Zea mays CL11049_1 mRNA sequence 155 1e-34
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
17dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
18dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
19dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
20gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H... 44 0.37
21gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.8
22ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein... 40 5.8
23gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, comple... 40 5.8
24emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.8
25gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.8
26gb|AF131950.1| Human papillomavirus candHPV85, complete genome 40 5.8
27gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Can... 40 5.8
28gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of... 40 5.8
29gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Canc... 40 5.8
30dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.8
31dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.8

>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA
          Length = 1061

 Score =  672 bits (339), Expect = 0.0
 Identities = 415/434 (95%), Gaps = 5/434 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cgtgcttctttaca-ggnaaagctctcctaaa-gctcccaggcatattttt-gcgataca 57
           |||||||||||||| || |||||||||||||| |||||||||| ||||||| ||||||||
Sbjct: 861 cgtgcttctttacaaggaaaagctctcctaaatgctcccaggcttattttttgcgataca 802

                                                                       
Query: 58  ggctacaaacacttttacat-ctataggatctgcctgctactcaaaagtaccgcggacac 116
           | || ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 801 gactgcaaacacttttacagactataggatctgcctgctactcaaa-gtaccgcggacac 743

                                                                       
Query: 117 acatatttacagatccacaagtaccgggcatgggctcctgcgcctctaaaacttcagcat 176
           ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||
Sbjct: 742 acatatttacagatccacaagtaccgggcatggactcctgcatctctaaaacttcagcat 683

                                                                       
Query: 177 ggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgattgtcctg 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgattgtcctg 623

                                                                       
Query: 237 gtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtcac 296
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 622 gtttactatcggtaatctgtggatcttcttcctgagcatcagagctgcggcatcggtcac 563

                                                                       
Query: 297 tgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtcct 356
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 562 tgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtctt 503

                                                                       
Query: 357 tgacccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacacatcggcgggc 416
           || |||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 502 tggcccatgtgaagccctcacgtgatcgctcttgacgacgaccccgacacatcggcgggc 443

                         
Query: 417 gctgtcgacaaccg 430
            |||||||||||||
Sbjct: 442 actgtcgacaaccg 429



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>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA
          Length = 1474

 Score =  654 bits (330), Expect = 0.0
 Identities = 412/433 (95%), Gaps = 5/433 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgcttctttaca-ggnaaagctctcctaaa-gctcccaggcatatttttgcgatacag 58
           |||||||||||||| || |||||||||||||| | |||||||| ||||||||||||||||
Sbjct: 49  cgtgcttctttacaaggaaaagctctcctaaaagttcccaggcttatttttgcgatacag 108

                                                                       
Query: 59  gctacaaacacttttacat-ctataggatctgcctgctactcaaaagtaccgcggacaca 117
           ||||||| ||||||||||  |||||| |||||||||||||||||||| ||||||||||||
Sbjct: 109 gctacaa-cacttttacagactatag-atctgcctgctactcaaaagcaccgcggacaca 166

                                                                       
Query: 118 catatttacagatccacaagtaccgggcatgggctcctgcgcctctaaaacttcagcatg 177
           |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 167 catatttacagatccacaagtaccgggcatggactcctgcatctctaaaacttcagcatg 226

                                                                       
Query: 178 gcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgattgtcctgg 237
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 227 gcctccaacgcgcgaagaacgtcgtcgcgggtaactatacctattacttgattgtcctgg 286

                                                                       
Query: 238 tttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtcact 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtcact 346

                                                                       
Query: 298 gttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtcctt 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 347 gttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtcttt 406

                                                                       
Query: 358 gacccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacacatcggcgggcg 417
           | |||||||||||||||||||| ||||||||| |||||||||||||| |||| ||| |||
Sbjct: 407 ggcccatgtgaagccctcgcgcaatcgctcttcacgacgaccccgacgcatctgcgagcg 466

                        
Query: 418 ctgtcgacaaccg 430
           |||||||||||||
Sbjct: 467 ctgtcgacaaccg 479



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>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 916

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457



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>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 1002

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457



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>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 956

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 696 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 637

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 636 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 577

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 576 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 517

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 516 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 463



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>ref|XM_468415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449



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>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper
            susceptibility protein Hd002A mRNA, complete cds
          Length = 1265

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                        
Query: 161  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
            |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 1114 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 1055

                                                                        
Query: 221  ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
            | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 1054 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 995

                                                                        
Query: 281  ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
            |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 994  ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 935

                                                                  
Query: 341  ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
            |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 934  ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 881



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>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full
           insert sequence
          Length = 833

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449



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>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full
           insert sequence
          Length = 994

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449



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>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full
           insert sequence
          Length = 916

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457



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>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full
           insert sequence
          Length = 1002

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457



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>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full
           insert sequence
          Length = 1514

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 683 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 624

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 623 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 564

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 563 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 504

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 503 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 450



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>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full
           insert sequence
          Length = 955

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 695 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 636

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 280
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 635 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 576

                                                                       
Query: 281 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 340
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 575 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 516

                                                                 
Query: 341 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 515 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 462



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>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced
           resistance protein 1 (Bi1) mRNA, complete cds
          Length = 1098

 Score =  196 bits (99), Expect = 4e-47
 Identities = 202/235 (85%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 220
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 949 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 890

                                                                       
Query: 221 ttacttgattgtcctggtttactatcggtaatctgtggatc-ttcttcttgagcatcaga 279
           | |||||  ||||||| ||||| || ||||||||||||||| |||||||| |||||||||
Sbjct: 889 tcacttgtctgtcctgatttacaattggtaatctgtggatccttcttctttagcatcaga 830

                                                                       
Query: 280 gctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcaca 339
           ||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| 
Sbjct: 829 gctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcact 770

                                                                  
Query: 340 tctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 394
           ||||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 769 tctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 715



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>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence
          Length = 803

 Score =  155 bits (78), Expect = 1e-34
 Identities = 220/269 (81%)
 Strand = Plus / Minus

                                                                       
Query: 162 ctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctat 221
           ||||| ||||| |||| | |||||| |||||||||| ||| |||||||||||||||||||
Sbjct: 594 ctaaatcttcaacatgccttccaacacgcgaagaacatcagcgcgggtaactatacctat 535

                                                                       
Query: 222 tacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagagc 281
           |||      |||||||||||| |  ||||||||||||||||||||||||||||| ||| |
Sbjct: 534 tacnnnnncgtcctggtttacaactggtaatctgtggatcttcttcttgagcatgagaac 475

                                                                       
Query: 282 tgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatc 341
            || |||||  |||| ||||| ||  | ||||| ||||| ||||||||||||||||| ||
Sbjct: 474 agcagcatccatcacggttttgtcagacgatagtgtgatagctggagatgtcatcacttc 415

                                                                       
Query: 342 tgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacgacgacccc 401
            |  ||||||||| | |||||||| || || || || || ||| |||||||||  |||||
Sbjct: 414 cgatatcttcgtcttggacccatgagaggctcttgcccggtcgttcttgacgatcacccc 355

                                        
Query: 402 gacacatcggcgggcgctgtcgacaaccg 430
           ||| |||| | || |||||||||| ||||
Sbjct: 354 gacgcatctgaggccgctgtcgacgaccg 326



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 216      acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 275
                |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 35111790 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 35111731

                               
Query: 276      cagagctgcggcatc 290
                ||||||||| |||||
Sbjct: 35111730 cagagctgccgcatc 35111716



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 161      tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 219
                |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 35111977 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 35111919



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 295      actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 354
                |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 35111621 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 35111562

                      
Query: 355      cttgac 360
                 |||||
Sbjct: 35111561 tttgac 35111556



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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1202_E07
          Length = 145014

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 216  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 275
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 7146 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 7087

                           
Query: 276  cagagctgcggcatc 290
            ||||||||| |||||
Sbjct: 7086 cagagctgccgcatc 7072



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 161  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 219
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 7333 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 7275



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 295  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 354
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 6977 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 6918

                  
Query: 355  cttgac 360
             |||||
Sbjct: 6917 tttgac 6912



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>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 216   acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 275
             |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 84953 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 84894

                            
Query: 276   cagagctgcggcatc 290
             ||||||||| |||||
Sbjct: 84893 cagagctgccgcatc 84879



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 161   tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 219
             |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 85140 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 85082



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 295   actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 354
             |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 84784 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 84725

                   
Query: 355   cttgac 360
              |||||
Sbjct: 84724 tttgac 84719



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>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full
            insert sequence
          Length = 4217

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                        
Query: 216  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 275
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 2400 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 2459

                           
Query: 276  cagagctgcggcatc 290
            ||||||||| |||||
Sbjct: 2460 cagagctgccgcatc 2474



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 161  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 219
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 2213 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 2271



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 295  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 354
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 2569 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 2628

                  
Query: 355  cttgac 360
             |||||
Sbjct: 2629 tttgac 2634



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>gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H17, complete sequence
          Length = 168278

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 64     aaacacttttacatctatagga 85
              ||||||||||||||||||||||
Sbjct: 101167 aaacacttttacatctatagga 101188



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 406     catcggcgggcgctgtcgac 425
               ||||||||||||||||||||
Sbjct: 1917126 catcggcgggcgctgtcgac 1917145



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>ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4760)
            partial mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  tctgtggatcttcttcttga 271
            ||||||||||||||||||||
Sbjct: 1378 tctgtggatcttcttcttga 1397



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>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tcttcttgagcatcagagct 282
              ||||||||||||||||||||
Sbjct: 171536 tcttcttgagcatcagagct 171517



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete
             sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   catcggcgggcgctgtcgac 425
             ||||||||||||||||||||
Sbjct: 75837 catcggcgggcgctgtcgac 75856



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 406     catcggcgggcgctgtcgac 425
               ||||||||||||||||||||
Sbjct: 2567233 catcggcgggcgctgtcgac 2567252



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>gb|AF131950.1| Human papillomavirus candHPV85, complete genome
          Length = 7812

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 47   tttgcgatacaggctacaaa 66
            ||||||||||||||||||||
Sbjct: 3734 tttgcgatacaggctacaaa 3753



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>gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 149183

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    tctcctaaagctcccaggca 42
             ||||||||||||||||||||
Sbjct: 89945 tctcctaaagctcccaggca 89926



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>gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of the complete genome
          Length = 10700

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 177  ggcctccaacgcgcgaagaacgtcatcg 204
            ||||| ||| ||||||||||||||||||
Sbjct: 2227 ggcctgcaaggcgcgaagaacgtcatcg 2200



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>gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 233119

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tctcctaaagctcccaggca 42
              ||||||||||||||||||||
Sbjct: 206298 tctcctaaagctcccaggca 206279



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>dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2514A21, complete
              sequence
          Length = 130977

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    acatatttacagatccacaa 136
              ||||||||||||||||||||
Sbjct: 119986 acatatttacagatccacaa 119967



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>dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736I10, complete
             sequence
          Length = 176944

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   acatatttacagatccacaa 136
             ||||||||||||||||||||
Sbjct: 30122 acatatttacagatccacaa 30103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,031,653
Number of Sequences: 3902068
Number of extensions: 3031653
Number of successful extensions: 51301
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51189
Number of HSP's gapped (non-prelim): 103
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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