>emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor
          Length = 498

 Score =  731 bits (369), Expect = 0.0
 Identities = 397/403 (98%), Gaps = 5/403 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacagtatacatattgttg---gccacacacacacgcataggcaagatgagtccggtcat 57
           |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aacagtatacatattgttgttggccacacacacacgcataggcaagatgagtccggtcat 342

                                                                       
Query: 58  ctcatccgagcttttattttaggcgccaagcggaacaatagtctcatgtgagcctgagcc 117
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 341 ctcatccgagcttttattttaggcgccaagcg-aacaatagtctcatgtgagcctgagc- 284

                                                                       
Query: 118 gatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcggcg 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcggcg 224

                                                                       
Query: 178 cagcggaacgtctgggggttcgtggtcaccacgcggcacgccgagcagccggtggggcac 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cagcggaacgtctgggggttcgtggtcaccacgcggcacgccgagcagccggtggggcac 164

                                                                       
Query: 238 tgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagcac 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagcac 104

                                                                       
Query: 298 gtggggaaatagtcggcgttcacgtgcgagaggactcccatgaccaggacggcctggagg 357
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gtggggaaatagacggcgttcacgtgcgagaggactcccatgaccaggacggcctggagg 44

                                                      
Query: 358 atcagaatcgccgcgagcttggtgcccttcatggttgctgatg 400
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  atcagaatcgccgcgagcttggtgcccttcatggttgctgatg 1

>gb|L11882.1|WHTWALI5A Triticum aestivum protein of unknown function (wali5) mRNA,
           complete cds
          Length = 520

 Score =  341 bits (172), Expect = 1e-90
 Identities = 268/300 (89%)
 Strand = Plus / Minus

                                                                       
Query: 116 ccgatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcgg 175
           ||||||||||||||||||| || || |||||||||||||||||||||| |||||| || |
Sbjct: 346 ccgatcagtacttcttgcagggtccaccgcaggtgccgtcgacggtggatttcatatccg 287

                                                                       
Query: 176 cgcagcggaacgtctgggggttcgtggtcaccacgcggcacgccgagcagccggtggggc 235
           |||||||  || | | |||| |||| | ||||||||||||||||||||||||   ||| |
Sbjct: 286 cgcagcgccacatttcggggctcgtcgacaccacgcggcacgccgagcagccctggggac 227

                                                                       
Query: 236 actgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagc 295
           |||  || |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 226 acttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgcagc 167

                                                                       
Query: 296 acgtggggaaatagtcggcgttcacgtgcgagaggactcccatgaccaggacggcctgga 355
           || |||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 166 acttggggaaaaaatcggcgttcacgtgtgagaggagtcccatgaccaggacggcctgga 107

                                                                       
Query: 356 ggatcagaatcgccgcgagcttggtgcccttcatggttgctgatgaactcctcgtgcaaa 415
           ||||||| |||||||||||||||||||||||||||||| |||||||| |  |||||||||
Sbjct: 106 ggatcaggatcgccgcgagcttggtgcccttcatggtttctgatgaagttttcgtgcaaa 47



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                       
Query: 13  attgttggccacacacacacgcataggcaagatgagtccggtcatctcatccgagctttt 72
           ||||||||||||||||||||||||||||| |||||  | | |||||||  | ||||||||
Sbjct: 443 attgttggccacacacacacgcataggcacgatgacgctgctcatctcgcctgagctttt 384

                 
Query: 73  atttta 78
           ||||||
Sbjct: 383 atttta 378

>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein
           (wrsi5-1) mRNA, complete cds
          Length = 608

 Score =  339 bits (171), Expect = 4e-90
 Identities = 260/289 (89%), Gaps = 3/289 (1%)
 Strand = Plus / Minus

                                                                       
Query: 118 gatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcggcg 177
           ||||||| ||| ||||||||||||||||||||||| |||||||||   ||||||||||||
Sbjct: 361 gatcagtgctttttgcatggcccgccgcaggtgccatcgacggtgctcttcatgtcggcg 302

                                                                       
Query: 178 cagcggaacgtctgg---gggttcgtggtcaccacgcggcacgccgagcagccggtgggg 234
           || |||||||||| |   ||| | |  |||||||||||||| |||||||||||  |||||
Sbjct: 301 caccggaacgtcttgtgagggctgggcgtcaccacgcggcaggccgagcagcccttgggg 242

                                                                       
Query: 235 cactgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcag 294
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cactgggggtgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcag 182

                                                                       
Query: 295 cacgtggggaaatagtcggcgttcacgtgcgagaggactcccatgaccaggacggcctgg 354
           ||| |||||||  |||||||||||||||| |||||||  |||||||||||||||||||||
Sbjct: 181 cacttggggaagaagtcggcgttcacgtgtgagaggatccccatgaccaggacggcctgg 122

                                                            
Query: 355 aggatcagaatcgccgcgagcttggtgcccttcatggttgctgatgaac 403
           |||||||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 121 aggatcaggatcgccgcgagcttggtgctcttcatgcttgctgatgaac 73



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   cagtatacatattgttggcc 22
           ||||||||||||||||||||
Sbjct: 482 cagtatacatattgttggcc 463

>gb|L28009.1|WHTWALIA Triticum aestivum (wali6) mRNA, complete cds
          Length = 585

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 110/130 (84%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                       
Query: 246 ggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagcacgtggggaa 305
           |||||||||||||||  || |||| |||||| |||||||||||| ||||||  | |||||
Sbjct: 216 ggcgtcgtcgcagaccacggcccccgagaagaacctgcagttgtcgcagcatttcgggaa 157

                                                                       
Query: 306 atagtcggcgttcacgtgcgagaggactcccatgaccaggacggcctggaggatcagaat 365
            |   |||||||| | || ||||||| |||||||||||||||||||||||| ||||| ||
Sbjct: 156 ct---cggcgttcgcctgtgagaggattcccatgaccaggacggcctggagaatcaggat 100

                     
Query: 366 cgccgcgagc 375
           |||| |||||
Sbjct: 99  cgccacgagc 90

>gb|L11881.1|WHTWALI3A Triticum aestivum protein of unknown function (wali3) mRNA,
           complete cds
          Length = 564

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 100/117 (85%), Gaps = 3/117 (2%)
 Strand = Plus / Minus

                                                                       
Query: 246 ggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagcacgtggggaa 305
           |||||| ||||||||  || |||| |||||| |||||||||||| ||||||| |||||||
Sbjct: 195 ggcgtcatcgcagaccacggcccccgagaagaacctgcagttgtcgcagcacttggggaa 136

                                                                    
Query: 306 atagtcggcgttcacgtgcgagaggactcccatgaccaggacggcctggaggatcag 362
            |   |||||||| | || ||||||| ||||||||||||||||||||| ||||||||
Sbjct: 135 ct---cggcgttcgcctgtgagaggattcccatgaccaggacggcctgaaggatcag 82

>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 325   gagaggactcccatgaccaggacggcctggagga 358
             ||||||| |||||||||||||| |||||||||||
Sbjct: 71843 gagaggattcccatgaccaggatggcctggagga 71810



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 210   gcggcacgccgagcagccggtggggcac 237
             |||||||||||||||||||| |||||||
Sbjct: 72099 gcggcacgccgagcagccggcggggcac 72072

>ref|NM_184249.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 334 cccatgaccaggacggcctggag 356
           |||||||||||||||||||||||
Sbjct: 56  cccatgaccaggacggcctggag 34

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 334     cccatgaccaggacggcctggag 356
               |||||||||||||||||||||||
Sbjct: 1757675 cccatgaccaggacggcctggag 1757697

>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504H10
          Length = 143515

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 334    cccatgaccaggacggcctggag 356
              |||||||||||||||||||||||
Sbjct: 100018 cccatgaccaggacggcctggag 100040

>gb|AY618464.1| Glomerella graminicola isolate 43 18S ribosomal RNA gene, partial
           sequence
          Length = 518

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 262 tcgaccccggagaaggacctg 282
           |||||||||||||||||||||
Sbjct: 176 tcgaccccggagaaggacctg 156

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 11      atattgttggccacacacaca 31
               |||||||||||||||||||||
Sbjct: 1152449 atattgttggccacacacaca 1152429

>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0660D08
          Length = 146915

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     atattgttggccacacacaca 31
              |||||||||||||||||||||
Sbjct: 128672 atattgttggccacacacaca 128652

>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0542E10
          Length = 146196

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 11   atattgttggccacacacaca 31
            |||||||||||||||||||||
Sbjct: 4402 atattgttggccacacacaca 4382

>emb|Z94139.1| Plectosphaerella sp. C99 partial 18S rRNA gene, strain C99
          Length = 421

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 262 tcgaccccggagaaggacctg 282
           |||||||||||||||||||||
Sbjct: 323 tcgaccccggagaaggacctg 343

>emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on chromosome 4, complete
              sequence
          Length = 190641

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 324    cgagaggactcccatgaccag 344
              |||||||||||||||||||||
Sbjct: 102390 cgagaggactcccatgaccag 102410

>ref|XM_580317.2| PREDICTED: Bos taurus collagen, type IV, alpha 1 (COL4A1), mRNA
          Length = 4920

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 223  cagccggtggggcactgcgg 242
            ||||||||||||||||||||
Sbjct: 4709 cagccggtggggcactgcgg 4690

>gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosome 16, complete
             sequence
          Length = 178904

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    cacacacacacgcataggca 41
             ||||||||||||||||||||
Sbjct: 63255 cacacacacacgcataggca 63274

>gb|AC073621.20| Homo sapiens chromosome 17, clone CTD-3073J20, complete sequence
          Length = 141048

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     cacacacacacgcataggca 41
              ||||||||||||||||||||
Sbjct: 109683 cacacacacacgcataggca 109702

>gb|AC161614.4| Pan troglodytes BAC clone CH251-575E11 from chromosome unknown,
             complete sequence
          Length = 172771

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tggccacacacacacgcata 37
             ||||||||||||||||||||
Sbjct: 67893 tggccacacacacacgcata 67874

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    tcatgtcggcgcagcggaac 186
              ||||||||||||||||||||
Sbjct: 807692 tcatgtcggcgcagcggaac 807673

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 167  tcatgtcggcgcagcggaac 186
            ||||||||||||||||||||
Sbjct: 8347 tcatgtcggcgcagcggaac 8366

>dbj|AP000841.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-89J9, complete
             sequence
          Length = 103177

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    cacacacacacgcataggca 41
             ||||||||||||||||||||
Sbjct: 15051 cacacacacacgcataggca 15070

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    gcggcacgccgagcagccgg 229
              ||||||||||||||||||||
Sbjct: 369398 gcggcacgccgagcagccgg 369417

>gb|AC122763.9| Mus musculus chromosome 19, clone RP24-68F2, complete sequence
          Length = 176325

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     cacacacacacgcataggca 41
              ||||||||||||||||||||
Sbjct: 134602 cacacacacacgcataggca 134621

>dbj|AP003150.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-215C1, complete
              sequences
          Length = 150724

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     cacacacacacgcataggca 41
              ||||||||||||||||||||
Sbjct: 127484 cacacacacacgcataggca 127465

>dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-190J24, complete
            sequences
          Length = 172173

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   cacacacacacgcataggca 41
            ||||||||||||||||||||
Sbjct: 9255 cacacacacacgcataggca 9236

>emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chromosome 4, complete
              sequence
          Length = 174638

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     cacacacacacgcataggca 41
              ||||||||||||||||||||
Sbjct: 112984 cacacacacacgcataggca 113003


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,320,312
Number of Sequences: 3902068
Number of extensions: 12320312
Number of successful extensions: 114814
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114584
Number of HSP's gapped (non-prelim): 225
length of query: 418
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 396
effective length of database: 17,147,199,772
effective search space: 6790291109712
effective search space used: 6790291109712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)