>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
            arginine/serine-rich 2-interacting protein)
            (SC35-interacting protein 1) (CTD-associated SR protein
            11) (Splicing regulatory protein 129) (SRrp129)
            (NY-REN-40 antigen)
          Length = 1148

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 28/85 (32%), Positives = 44/85 (51%)
 Frame = -3

Query: 529  SKDSRSMKLFKVAIADFVKEVLKPSWRQGNMSRDAFKMIVRKTVDKVSSSVPGNHIPKTP 350
            SK  + +++ + A A  VK  +KP ++  +++++ +K IVRK VDKV  S  G       
Sbjct: 1056 SKTDKKLQIQEKA-AQEVKLAIKPFYQNKDITKEEYKEIVRKAVDKVCHSKSG------- 1107

Query: 349  AKIRQYVQSSQRKVTKLVMGYVDKY 275
                   + +  KV  LV  YVDKY
Sbjct: 1108 -------EVNSTKVANLVKAYVDKY 1125

>GPMA_BUCAI (P57390) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase|
           (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM)
           (BPG-dependent PGAM) (dPGM)
          Length = 231

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +3

Query: 405 FLTIILKASLLMFPCLHDGLRTSLTKSAIATLKSFIDLESLLFLLTSNDWSLS 563
           F  I+LK     F C H    TSL K AI TL+  +D  +  +L     W L+
Sbjct: 40  FAAILLKKEKFFFDCAH----TSLLKRAIHTLQYILDELNQTWLSVKKSWRLN 88

>CP242_PIG (P79402) Cytochrome P450 2C42 (EC 1.14.14.1) (CYPIIC42) (Fragment)|
          Length = 327

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -1

Query: 111 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDIS 4
           +GTT+L S   TSV Y  K  P+P +F   HF+D S
Sbjct: 220 KGTTILTSL--TSVLYDCKAFPNPEVFDPGHFLDES 253

>RS17E_SULAC (Q4JAX5) 30S ribosomal protein S17e|
          Length = 82

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = -3

Query: 445 GNMSRDAFKMIVRKTVDKVSSSVPGNHIPKTPAKIRQYVQSSQRKVTKLVMGYVDKYVKL 266
           GN+     K + R+  DK        +       + +YV  S +KV   + GY+ +YVK+
Sbjct: 2   GNVYTKDIKRVARELYDKFKDQASDKY-DDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKI 60

>CR1EA_BACTX (Q57458) Pesticidal crystal protein cry1Ea (Insecticidal|
           delta-endotoxin CryIE(a)) (Crystaline entomocidal
           protoxin) (133 kDa crystal protein)
          Length = 1171

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +2

Query: 26  TTNRTGLGSNLTEYETDV*THDS----NTVVPSVLTRIPSCKG 142
           T  R+   +N+T   T V TH S    NT+ P ++T+IP  KG
Sbjct: 430 TLTRSLYNTNITSLPTFVWTHHSATNTNTINPDIITQIPLVKG 472

>NUSB_ENTFA (Q836W8) N utilization substance protein B homolog (Protein nusB)|
          Length = 154

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 12/39 (30%), Positives = 26/39 (66%)
 Frame = -3

Query: 583 SDIPDDIDNDQSLDVSKKSKDSRSMKLFKVAIADFVKEV 467
           SD+P+ +  ++++++SKK  D RS K     +++ +KE+
Sbjct: 112 SDVPNIVALNEAVELSKKYSDDRSRKFVNGVLSNVMKEI 150

>RS17E_SULSO (Q980K7) 30S ribosomal protein S17e|
          Length = 79

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -3

Query: 445 GNMSRDAFKMIVRKTVDKVSSSVPGNHIPKTPAKIRQYVQSSQRKVTKLVMGYVDKYVKL 266
           GN+     K IV++  D+    +  ++       IR YV    +KV   + GY+ +Y K+
Sbjct: 2   GNIYTKDIKRIVKEIYDRYKDEIKDDYNTNKQIVIR-YVDVKSKKVRNRIAGYLTRYYKI 60

>Y1451_METJA (Q58846) Hypothetical protein MJ1451|
          Length = 484

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -3

Query: 511 MKLFKVAIADFVKEVLKPSWRQGNMSRDAFKMIVRKT 401
           ++L + A+AD VKEVL  S ++  ++ D    +VR T
Sbjct: 92  VELTREAVADMVKEVLLESLKKAGLTVDDLHFVVRST 128

>CP2CJ_HUMAN (P33261) Cytochrome P450 2C19 (EC 1.14.13.80) ((R)-limonene|
           6-monooxygenase) (EC 1.14.13.48) ((S)-limonene
           6-monooxygenase) (EC 1.14.13.49) ((S)-limonene
           7-monooxygenase) (CYPIIC19) (P450-11A) (Mephenytoin
           4-hydroxylase) (CYPIIC17) (P450-254C
          Length = 490

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 111 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVD 10
           +GTT+L S   TSV +  K  P+P +F  +HF+D
Sbjct: 383 KGTTILTSL--TSVLHDNKEFPNPEMFDPRHFLD 414

>PSBB_SYNY3 (P05429) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 507

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 514 SMKLFKVAIADFVKEVLKPSWRQG 443
           SM L+++AI D    VL P WRQG
Sbjct: 36  SMALYELAIFDSSDAVLNPMWRQG 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,901,226
Number of Sequences: 219361
Number of extensions: 1404104
Number of successful extensions: 3794
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3792
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)