Clone Name | rbasd25c03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK100534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N06, full insert sequence Length = 3665 Score = 301 bits (152), Expect = 1e-78 Identities = 236/264 (89%) Strand = Plus / Minus Query: 263 ctataacttcacatacttgtcaacataacccattactagtttggtcactttcctttgaga 322 ||||| ||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||| Sbjct: 3266 ctatagcttcacatatttgtcaacatagcccattacaagtttggtcactttcttttgaga 3207 Query: 323 agactggacatactgtctaatcttggctggtgttttcggtatatgattgccaggaaccga 382 |||||||||||||| | ||||||||||| ||||| || ||||||||| ||| || || Sbjct: 3206 ggactggacatactgcttgatcttggctggcgtttttggaatatgattgttagggacaga 3147 Query: 383 actagagaccttatcaactgttttcctaacaatcattttgaaagcatctctgctcatgtt 442 |||||| |||||||||||||||||| | ||||| |||||||||| ||||| || ||||| Sbjct: 3146 actagaaaccttatcaactgttttcttgacaatggttttgaaagcctctctacttatgtt 3087 Query: 443 tccctgcctccatgatggcttaagaacttccttaacgaaatctgcaatagcaaccttaaa 502 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 3086 tccctgcctccatgatggcttaagaacttctttaacaaaatctgcaatagcaaccttaaa 3027 Query: 503 aagcttcattgatctggagtcctt 526 ||||||||||||||||| ||||| Sbjct: 3026 tagcttcattgatctggaatcctt 3003
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 268 bits (135), Expect = 2e-68 Identities = 210/235 (89%) Strand = Plus / Plus Query: 292 ccattactagtttggtcactttcctttgagaagactggacatactgtctaatcttggctg 351 ||||||| ||||||||||||||| ||||||| |||||||||||||| | |||||||||| Sbjct: 5975975 ccattacaagtttggtcactttcttttgagaggactggacatactgcttgatcttggctg 5976034 Query: 352 gtgttttcggtatatgattgccaggaaccgaactagagaccttatcaactgttttcctaa 411 | ||||| || ||||||||| ||| || |||||||| |||||||||||||||||| | | Sbjct: 5976035 gcgtttttggaatatgattgttagggacagaactagaaaccttatcaactgttttcttga 5976094 Query: 412 caatcattttgaaagcatctctgctcatgtttccctgcctccatgatggcttaagaactt 471 |||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 5976095 caatggttttgaaagcctctctacttatgtttccctgcctccatgatggcttaagaactt 5976154 Query: 472 ccttaacgaaatctgcaatagcaaccttaaaaagcttcattgatctggagtcctt 526 | ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 5976155 ctttaacaaaatctgcaatagcaaccttaaatagcttcattgatctggaatcctt 5976209
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 268 bits (135), Expect = 2e-68 Identities = 210/235 (89%) Strand = Plus / Plus Query: 292 ccattactagtttggtcactttcctttgagaagactggacatactgtctaatcttggctg 351 ||||||| ||||||||||||||| ||||||| |||||||||||||| | |||||||||| Sbjct: 125597 ccattacaagtttggtcactttcttttgagaggactggacatactgcttgatcttggctg 125656 Query: 352 gtgttttcggtatatgattgccaggaaccgaactagagaccttatcaactgttttcctaa 411 | ||||| || ||||||||| ||| || |||||||| |||||||||||||||||| | | Sbjct: 125657 gcgtttttggaatatgattgttagggacagaactagaaaccttatcaactgttttcttga 125716 Query: 412 caatcattttgaaagcatctctgctcatgtttccctgcctccatgatggcttaagaactt 471 |||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 125717 caatggttttgaaagcctctctacttatgtttccctgcctccatgatggcttaagaactt 125776 Query: 472 ccttaacgaaatctgcaatagcaaccttaaaaagcttcattgatctggagtcctt 526 | ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 125777 ctttaacaaaatctgcaatagcaaccttaaatagcttcattgatctggaatcctt 125831
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 268 bits (135), Expect = 2e-68 Identities = 210/235 (89%) Strand = Plus / Plus Query: 292 ccattactagtttggtcactttcctttgagaagactggacatactgtctaatcttggctg 351 ||||||| ||||||||||||||| ||||||| |||||||||||||| | |||||||||| Sbjct: 34510 ccattacaagtttggtcactttcttttgagaggactggacatactgcttgatcttggctg 34569 Query: 352 gtgttttcggtatatgattgccaggaaccgaactagagaccttatcaactgttttcctaa 411 | ||||| || ||||||||| ||| || |||||||| |||||||||||||||||| | | Sbjct: 34570 gcgtttttggaatatgattgttagggacagaactagaaaccttatcaactgttttcttga 34629 Query: 412 caatcattttgaaagcatctctgctcatgtttccctgcctccatgatggcttaagaactt 471 |||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 34630 caatggttttgaaagcctctctacttatgtttccctgcctccatgatggcttaagaactt 34689 Query: 472 ccttaacgaaatctgcaatagcaaccttaaaaagcttcattgatctggagtcctt 526 | ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 34690 ctttaacaaaatctgcaatagcaaccttaaatagcttcattgatctggaatcctt 34744
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 268 bits (135), Expect = 2e-68 Identities = 210/235 (89%) Strand = Plus / Plus Query: 292 ccattactagtttggtcactttcctttgagaagactggacatactgtctaatcttggctg 351 ||||||| ||||||||||||||| ||||||| |||||||||||||| | |||||||||| Sbjct: 5975188 ccattacaagtttggtcactttcttttgagaggactggacatactgcttgatcttggctg 5975247 Query: 352 gtgttttcggtatatgattgccaggaaccgaactagagaccttatcaactgttttcctaa 411 | ||||| || ||||||||| ||| || |||||||| |||||||||||||||||| | | Sbjct: 5975248 gcgtttttggaatatgattgttagggacagaactagaaaccttatcaactgttttcttga 5975307 Query: 412 caatcattttgaaagcatctctgctcatgtttccctgcctccatgatggcttaagaactt 471 |||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 5975308 caatggttttgaaagcctctctacttatgtttccctgcctccatgatggcttaagaactt 5975367 Query: 472 ccttaacgaaatctgcaatagcaaccttaaaaagcttcattgatctggagtcctt 526 | ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 5975368 ctttaacaaaatctgcaatagcaaccttaaatagcttcattgatctggaatcctt 5975422
>gb|AY110799.1| Zea mays CL4694_1 mRNA sequence Length = 761 Score = 212 bits (107), Expect = 1e-51 Identities = 195/226 (86%) Strand = Plus / Minus Query: 269 cttcacatacttgtcaacataacccattactagtttggtcactttcctttgagaagactg 328 ||||||||||||||| ||||| |||||||||| ||||||||| |||||||| || || || Sbjct: 249 cttcacatacttgtcgacataccccattactaatttggtcaccttcctttgggaggattg 190 Query: 329 gacatactgtctaatcttggctggtgttttcggtatatgattgccaggaaccgaactaga 388 ||||| ||| |||||||||| |||| || |||||| ||| |||||| |||| || Sbjct: 189 tacataatgtttaatcttggcaggtgnnnnnggaatatgactgctaggaactgaaccgga 130 Query: 389 gaccttatcaactgttttcctaacaatcattttgaaagcatctctgctcatgtttccctg 448 |||||||||||||||||||| ||||| |||||||||| ||| |||||||||| ||||| Sbjct: 129 aaccttatcaactgttttcctgacaatagttttgaaagcctctttgctcatgttaccctg 70 Query: 449 cctccatgatggcttaagaacttccttaacgaaatctgcaatagca 494 |||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 69 cctccatgatggtttaagaacttccttaacaaaatctgcaatagca 24
>ref|NM_113597.2| Arabidopsis thaliana unknown protein AT3G26850 transcript variant AT3G26850.1 mRNA, complete cds Length = 1700 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 273 acatacttgtcaacataacccattactagtttggt 307 ||||||||||| ||||||||||| || |||||||| Sbjct: 1141 acatacttgtctacataacccataaccagtttggt 1107
>ref|NM_202639.1| Arabidopsis thaliana unknown protein AT3G26850 transcript variant AT3G26850.2 mRNA, complete cds Length = 1257 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 273 acatacttgtcaacataacccattactagtttggt 307 ||||||||||| ||||||||||| || |||||||| Sbjct: 1141 acatacttgtctacataacccataaccagtttggt 1107
>gb|BT015404.1| Arabidopsis thaliana At3g26850 gene, complete cds Length = 798 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 273 acatacttgtcaacataacccattactagtttggt 307 ||||||||||| ||||||||||| || |||||||| Sbjct: 788 acatacttgtctacataacccataaccagtttggt 754
>gb|AY056130.1| Arabidopsis thaliana unknown protein (At3g26850) mRNA, complete cds Length = 1468 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 273 acatacttgtcaacataacccattactagtttggt 307 ||||||||||| ||||||||||| || |||||||| Sbjct: 1142 acatacttgtctacataacccataaccagtttggt 1108
>emb|BX825649.1|CNS0A6C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZE12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 758 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 273 acatacttgtcaacataacccattactagtttggt 307 ||||||||||| ||||||||||| || |||||||| Sbjct: 438 acatacttgtctacataacccataaccagtttggt 404
>gb|AC016250.5| Homo sapiens chromosome 8 clone RP11-516P9, complete sequence Length = 199569 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 aaaggactttctcatgcaaatagatg 162 ||||||||||||||||||||| |||| Sbjct: 195428 aaaggactttctcatgcaaattgatg 195403
>gb|AF267536.2| Takifugu rubripes NKX2.9 (nkx2.9) gene, exons 1 and 2 and complete cds; and Pax9 (pax9) gene, exons 1 through 4 and complete cds Length = 24431 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 425 agcatctctgctcatgtttccc 446 |||||||||||||||||||||| Sbjct: 11981 agcatctctgctcatgtttccc 11960
>gb|AC025207.5| Homo sapiens chromosome 8, clone RP11-193J8, complete sequence Length = 157375 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 aaaggactttctcatgcaaatagatg 162 ||||||||||||||||||||| |||| Sbjct: 41292 aaaggactttctcatgcaaattgatg 41317
>gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, complete sequence Length = 200452 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 gtaaaggactttctcatgcaaa 156 |||||||||||||||||||||| Sbjct: 157305 gtaaaggactttctcatgcaaa 157326
>gb|AC145163.5| Mus musculus BAC clone RP24-238C5 from chromosome 12, complete sequence Length = 194429 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 212 acttctacaactgcaaaggaagtctcttct 241 |||| ||||| ||||||||||||||||||| Sbjct: 117316 acttgtacaagtgcaaaggaagtctcttct 117345
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 212 acttctacaactgcaaaggaagtctcttct 241 |||| ||||| ||||||||||||||||||| Sbjct: 184862 acttgtacaagtgcaaaggaagtctcttct 184891
>emb|AL929434.3| Zebrafish DNA sequence from clone CH211-127L15, complete sequence Length = 178948 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 aagaaatatcaacaaagtgctt 24 |||||||||||||||||||||| Sbjct: 51025 aagaaatatcaacaaagtgctt 51046
>dbj|AP003548.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1448A5 Length = 178420 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 aaaggactttctcatgcaaatagatg 162 ||||||||||||||||||||| |||| Sbjct: 42915 aaaggactttctcatgcaaattgatg 42940
>gb|U06670.1|MMU06670 Mus musculus very low density lipoprotein receptor mRNA, complete cds Length = 3283 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 agaaatatcaacaaagtgctt 24 ||||||||||||||||||||| Sbjct: 3205 agaaatatcaacaaagtgctt 3185
>gb|U28736.1| Caenorhabditis elegans cosmid F26A10, complete sequence Length = 38482 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 acttacaagaataccttcttg 135 ||||||||||||||||||||| Sbjct: 29978 acttacaagaataccttcttg 29958
>ref|NM_013703.1| Mus musculus very low density lipoprotein receptor (Vldlr), mRNA Length = 3283 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 agaaatatcaacaaagtgctt 24 ||||||||||||||||||||| Sbjct: 3205 agaaatatcaacaaagtgctt 3185
>gb|AC104088.6| Homo sapiens BAC clone RP11-744C22 from 2, complete sequence Length = 158746 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 tcattttgaaagcatctctgctcat 439 ||||||||||||||||| ||||||| Sbjct: 7454 tcattttgaaagcatctatgctcat 7430
>ref|XM_526174.1| PREDICTED: Pan troglodytes similar to oxidative-stress responsive 1 (LOC470791), mRNA Length = 1701 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1662 atcatcaggaatatctgagc 1643
>ref|XM_605332.2| PREDICTED: Bos taurus similar to oxidative-stress responsive 1, transcript variant 1 (LOC526949), mRNA Length = 1979 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1553 atcatcaggaatatctgagc 1534
>ref|XM_879712.1| PREDICTED: Bos taurus similar to oxidative-stress responsive 1, transcript variant 2 (LOC526949), mRNA Length = 1937 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1511 atcatcaggaatatctgagc 1492
>gb|BC008726.2| Homo sapiens oxidative-stress responsive 1, mRNA (cDNA clone MGC:1572 IMAGE:3163379), complete cds Length = 4521 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1870 atcatcaggaatatctgagc 1851
>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence Length = 228889 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgtttccctgcctccatg 456 |||||||||||||||||||| Sbjct: 205639 catgtttccctgcctccatg 205620
>gb|DQ201638.1| Homo sapiens oxidative-stress responsive 1 (OXSR1) gene, complete cds Length = 93915 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 89333 atcatcaggaatatctgagc 89314
>gb|AY220493.1| Yersinia frederiksenii plasmid pMYF1 TcYF3 gene, complete cds Length = 2937 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 actggtcattgtcgatatca 569 |||||||||||||||||||| Sbjct: 1714 actggtcattgtcgatatca 1695
>gb|AC125399.3| Mus musculus BAC clone RP24-245C15 from chromosome 14, complete sequence Length = 195425 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 atgtttaaacacatgattct 94 |||||||||||||||||||| Sbjct: 156209 atgtttaaacacatgattct 156190
>gb|AC124486.4| Mus musculus BAC clone RP23-451E1 from chromosome 12, complete sequence Length = 183140 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tgtttaaacacatgattcta 95 |||||||||||||||||||| Sbjct: 133895 tgtttaaacacatgattcta 133876
>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence Length = 229721 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgtttccctgcctccatg 456 |||||||||||||||||||| Sbjct: 101989 catgtttccctgcctccatg 101970
>emb|CR954286.2|RP43001A02 Pan troglodytes chromosome X BAC RP43-001A02, complete sequence Length = 186572 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cttcacatacttgtcaacat 288 |||||||||||||||||||| Sbjct: 60734 cttcacatacttgtcaacat 60715
>emb|AL356140.16| Human DNA sequence from clone RP11-268H18 on chromosome 10, complete sequence Length = 139968 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 caaaggaagtctcttctgattggc 248 ||||||| |||||||||||||||| Sbjct: 84041 caaaggatgtctcttctgattggc 84064
>gb|AF087893.1| Homo sapiens DCHT2 mRNA, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1033 atcatcaggaatatctgagc 1014
>gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Hospital Oakland Research Institute) complete sequence Length = 242500 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tgtaaaggactttctcatgc 153 |||||||||||||||||||| Sbjct: 202855 tgtaaaggactttctcatgc 202836
>emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chromosome 11 Cntains the 3' end of the Nipsnap1 gene for 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans), a novel gene, a ribosomal protein L17 (Rpl17) pseudogene, the Nefh gene for neurofilament heavy polypeptide, the Ap1b1 gene for adaptor protein complex AP-1 beta 1 subunit, the gene for the ortholog of human RAS-related protein on chromosome 22, the gene for the ortholog of human growth arrest-specific 2 like 1 GAS2L1 and six CpG islands, complete sequence Length = 183758 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ttctacaactgcaaaggaag 233 |||||||||||||||||||| Sbjct: 42628 ttctacaactgcaaaggaag 42609
>emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 in linkage group 13, complete sequence Length = 186151 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 aaatctgcaatagcaacctt 499 |||||||||||||||||||| Sbjct: 119540 aaatctgcaatagcaacctt 119559
>gb|AC069242.13| Homo sapiens 3 BAC RP11-554J1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184664 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 ttacatccaatgactggtca 557 |||||||||||||||||||| Sbjct: 78042 ttacatccaatgactggtca 78023
>dbj|AB029024.1| Homo sapiens mRNA for KIAA1101 protein, partial cds Length = 4272 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1640 atcatcaggaatatctgagc 1621
>ref|NM_005109.2| Homo sapiens oxidative-stress responsive 1 (OXSR1), mRNA Length = 4525 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1887 atcatcaggaatatctgagc 1868
>gb|AC079864.22| Homo sapiens Xp BAC RP11-662G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161874 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cttcacatacttgtcaacat 288 |||||||||||||||||||| Sbjct: 4858 cttcacatacttgtcaacat 4839
>gb|AC093116.2| Homo sapiens chromosome 3 clone RP11-370K13, complete sequence Length = 182224 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 46933 atcatcaggaatatctgagc 46952
>gb|AY335598.1| Synthetic construct Homo sapiens oxidative-stress responsive 1 (OSR1) mRNA, partial cds Length = 1584 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1545 atcatcaggaatatctgagc 1526
>emb|AL591905.10| Mouse DNA sequence from clone RP23-152H17 on chromosome 2, complete sequence Length = 194013 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tgtttaaacacatgattcta 95 |||||||||||||||||||| Sbjct: 161820 tgtttaaacacatgattcta 161801
>emb|BX284670.11| Zebrafish DNA sequence from clone CH211-264D7 in linkage group 18, complete sequence Length = 159822 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 aaatctgcaatagcaacctt 499 |||||||||||||||||||| Sbjct: 44379 aaatctgcaatagcaacctt 44360
>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence Length = 213958 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 catgtttccctgcctccatg 456 |||||||||||||||||||| Sbjct: 33154 catgtttccctgcctccatg 33173
>emb|BX928740.16| Zebrafish DNA sequence from clone CH211-245J22 in linkage group 18, complete sequence Length = 154133 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaactgatgtttaaacacat 88 |||||||||||||||||||| Sbjct: 39008 aaactgatgtttaaacacat 38989
>dbj|AP006193.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-815I22, complete sequence Length = 205834 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 146616 atcatcaggaatatctgagc 146635
>emb|CT485784.2| RP43-026J01, complete sequence Length = 201375 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cttcacatacttgtcaacat 288 |||||||||||||||||||| Sbjct: 169038 cttcacatacttgtcaacat 169019
>dbj|AP000499.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:603 to 320, anti-oncogene region, section 2/3 Length = 100000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 69162 atcatcaggaatatctgagc 69143
>dbj|AB017642.1| Homo sapiens mRNA for oxidative-stress responsive 1, complete cds Length = 4519 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 1887 atcatcaggaatatctgagc 1868
>dbj|AB026898.1| Homo sapiens DNA, DLEC1 to ORCTL4 gene region, section 1/2 (DLEC1, ORCTL3, ORCTL4 genes, complete cds) Length = 270000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 atcatcaggaatatctgagc 585 |||||||||||||||||||| Sbjct: 201834 atcatcaggaatatctgagc 201815 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,456,054 Number of Sequences: 3902068 Number of extensions: 5456054 Number of successful extensions: 137515 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137337 Number of HSP's gapped (non-prelim): 178 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)