>MAVS_RAT (Q66HG9) Mitochondrial antiviral signaling protein (Interferon-beta|
           promoter stimulator protein 1) (IPS-1) (Virus-induced
           signaling adapter)
          Length = 507

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
 Frame = +1

Query: 277 LNRQDYWVVLSAFSLCDCELKGLTRYSSSSAQLHIPPG-----------PRTPATLSQSS 423
           L R+  WV +   +L  CEL GL    +   Q ++PPG           PR P T+S+ S
Sbjct: 62  LQRRPGWVEVFIRALRICELPGLAEQVTRVYQSYLPPGASLHSLDPLQSPRIPTTVSEPS 121

>UBP8_MOUSE (Q80U87) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 8)
           (Ubiquitin-specific-processing protease 8)
           (Deubiquitinating enzyme 8) (mUBPy)
          Length = 1080

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 497 AKEFGVIDKILWRGQEKYMSDMLSPEDWDKVAG 399
           A+EFG+I K LW GQ +Y    +SP+D+    G
Sbjct: 789 AEEFGIIMKALWTGQYRY----ISPKDFKVTIG 817

>UBP8_HUMAN (P40818) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 8) (Ubiquitin-specific
           processing protease 8) (Deubiquitinating enzyme 8)
           (hUBPy)
          Length = 1118

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 497 AKEFGVIDKILWRGQEKYMSDMLSPEDWDKVAG 399
           A+EFG+I K LW GQ +Y    +SP+D+    G
Sbjct: 827 AEEFGIIMKALWTGQYRY----ISPKDFKITIG 855

>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
           (Endostatin-XV) (Restin) (Related to endostatin)]
          Length = 1388

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
 Frame = +1

Query: 340 GLTRYSSSSAQLHIPPGPRTPATL-----SQSSGES 432
           GL R++ S  QL + P PRTP  L     S +SGE+
Sbjct: 211 GLERFTGSLQQLTVHPDPRTPEELCDPEESSASGET 246

>CLPP_HELPY (P56156) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -1

Query: 518 FYMDSLKAKEFGVIDKIL 465
           FYM + +AKE+G+IDK+L
Sbjct: 174 FYMSAKEAKEYGLIDKVL 191

>PHLPL_MOUSE (Q8BXA7) PH domain leucine-rich repeat protein phosphatase-like (EC|
            3.1.3.16)
          Length = 1320

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +1

Query: 322  CDCELKGLTRYS----SSSAQLHIPPGPRTPATLSQSSGESMSDM 444
            C CE+ GLT       +S+A L   P P TP++ S  + E  S+M
Sbjct: 1037 CTCEMNGLTLPGPVGFASTAALKDTPKPTTPSSSSGIASEFSSEM 1081

>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein|
          Length = 1509

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
 Frame = +2

Query: 392 LGLQQP-------CPNPQGRACPTCTSPDRAKGSCQLPQTPWLSKSP 511
           LGLQQP        P PQ  A P  T+P  + G    P+   L + P
Sbjct: 586 LGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPP 632

>CLPP_HELPJ (Q9ZL50) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 195

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -1

Query: 518 FYMDSLKAKEFGVIDKIL 465
           FYM + +AKE+G+IDK+L
Sbjct: 173 FYMSAKEAKEYGLIDKVL 190

>CLPP_GEOKA (Q5KVD9) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 515 YMDSLKAKEFGVIDKILWRGQEK 447
           +M + KA E+G+ID++L R  EK
Sbjct: 174 FMTAQKAMEYGIIDRVLTRADEK 196

>AHM1_ARATH (Q9M3H5) Putative cadmium/zinc-transporting ATPase HMA1,|
           chloroplast precursor (EC 3.6.3.3) (EC 3.6.3.5)
          Length = 819

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 64  TIAPPKTLARSYPERIRSSSNLLP 135
           +I PPKTL R  P RI +S NL P
Sbjct: 33  SILPPKTLLRQKPLRISASLNLPP 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,297,050
Number of Sequences: 219361
Number of extensions: 1534793
Number of successful extensions: 4337
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4337
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)