Clone Name | rbasd25b17 |
---|---|
Clone Library Name | barley_pub |
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 934 bits (471), Expect = 0.0 Identities = 490/495 (98%), Gaps = 1/495 (0%) Strand = Plus / Minus Query: 28 aaatacataactaagnatgatacatttgcttcgatctggtgatggtatcaagattgttga 87 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 497 aaatacataactaag-atgatacatttgcttcgatgtggtgatggtatcaagattgttga 439 Query: 88 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 379 Query: 148 ttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagag 207 ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 ttcaagagactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagag 319 Query: 208 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 259 Query: 268 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 199 Query: 328 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 139 Query: 388 agttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcc 447 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 138 agttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcc 79 Query: 448 cgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaaacccaa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 cgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaaacccaa 19 Query: 508 tatgagaacacaaat 522 ||||||||||||||| Sbjct: 18 tatgagaacacaaat 4
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 934 bits (471), Expect = 0.0 Identities = 490/495 (98%), Gaps = 1/495 (0%) Strand = Plus / Minus Query: 28 aaatacataactaagnatgatacatttgcttcgatctggtgatggtatcaagattgttga 87 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 aaatacataactaag-atgatacatttgcttcgatctggtgatggtatcaagattgttga 512 Query: 88 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 452 Query: 148 ttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagag 207 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagag 392 Query: 208 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 332 Query: 268 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 327 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 agtccggcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 272 Query: 328 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 212 Query: 388 agttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcc 447 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 211 agttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcc 152 Query: 448 cgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaaacccaa 507 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 151 cgtcgtgttcttgcagcaactcttggcttctacttggacctgctccagaactaaacccaa 92 Query: 508 tatgagaacacaaat 522 ||||||||||||||| Sbjct: 91 tatgagaacacaaat 77
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 934 bits (471), Expect = 0.0 Identities = 490/495 (98%), Gaps = 1/495 (0%) Strand = Plus / Minus Query: 28 aaatacataactaagnatgatacatttgcttcgatctggtgatggtatcaagattgttga 87 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 aaatacataactaag-atgatacatttgcttcgatctggtgatggtatcaagattgttga 512 Query: 88 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 452 Query: 148 ttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagag 207 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagag 392 Query: 208 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 332 Query: 268 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 327 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 agtccggcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 272 Query: 328 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 212 Query: 388 agttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcc 447 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 211 agttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcc 152 Query: 448 cgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaaacccaa 507 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 151 cgtcgtgttcttgcagcaactcttggcttctacttggacctgctccagaactaaacccaa 92 Query: 508 tatgagaacacaaat 522 ||||||||||||||| Sbjct: 91 tatgagaacacaaat 77
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 888 bits (448), Expect = 0.0 Identities = 460/464 (99%) Strand = Plus / Minus Query: 59 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 481 Query: 119 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcatta 178 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 480 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 421 Query: 179 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 361 Query: 239 gaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtc 298 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 360 gaaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtc 301 Query: 299 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 241 Query: 359 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcg 181 Query: 419 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttct 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttct 121 Query: 479 acttggacctgctccagaactaaacccaatatgagaacacaaat 522 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 acttggacctgctccagaactaaacccaatatgagaacacaaat 77
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 769 bits (388), Expect = 0.0 Identities = 407/412 (98%), Gaps = 1/412 (0%) Strand = Plus / Minus Query: 28 aaatacataactaagnatgatacatttgcttcgatctggtgatggtatcaagattgttga 87 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 aaatacataactaag-atgatacatttgcttcgatctggtgatggtatcaagattgttga 353 Query: 88 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 147 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 acagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 293 Query: 148 ttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagag 207 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 ttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagag 233 Query: 208 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 267 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 232 tcccatgtcgaatttcatctcttggccacgggaaacattgtccaggttgtcacagacgga 173 Query: 268 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 113 Query: 328 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 387 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 112 attcagcttaggatagtccctaggacaggttgggccgcttatgattttacaaccacaagc 53 Query: 388 agttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcag 439 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52 agttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcag 1
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 747 bits (377), Expect = 0.0 Identities = 380/381 (99%) Strand = Plus / Minus Query: 142 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 202 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 262 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 322 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 382 acaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtt 441 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 442 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 502 acccaatatgagaacacaaat 522 ||||||||||||||||||||| Sbjct: 54 acccaatatgagaacacaaat 34
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 571 bits (288), Expect = e-160 Identities = 433/480 (90%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 44 atgatacatttgcttcgat-ctggtgatggtatcaagattgttgaacagaaaatgacaaa 102 ||||||||||| ||||||| | | |||||||||||||||| || || | |||||||||| Sbjct: 538 atgatacatttccttcgatacagctgatggtatcaagattattcaagacaaaatgacaat 479 Query: 103 acgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaat 162 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 478 acgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaat 419 Query: 163 gacatcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 222 ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gactgcaccatcattacaaaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 359 Query: 223 catctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaat 282 |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 358 catctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaat 299 Query: 283 tgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggata 342 |||||||||| ||| ||| ||||||||||||||||||||||||||| || |||||||| Sbjct: 298 ggtgcagtactgagtgacatctggttcaccggattcagggagaagattaagtttaggata 239 Query: 343 gtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactgg 402 ||| ||||| ||| |||| || |||||||||||||||| ||||||| |||||||||||| Sbjct: 238 gtcactagggcattttggaccacttatgattttacaacgacaagcacctgcgcagactgg 179 Query: 403 tcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgca 462 ||||||||||| ||||||||||| | ||||||||||||||| | ||||| |||||| Sbjct: 178 acgggaaccacccgcgaaacggcaagtgttgtagcagtttctagctaacgtgtccttgca 119 Query: 463 gcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaat 522 |||||| || || || || ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 118 gcaactttttccctccacctggacctgctccagaactaaacccagtatgagaacacaaat 59
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 563 bits (284), Expect = e-157 Identities = 445/496 (89%), Gaps = 2/496 (0%) Strand = Plus / Minus Query: 28 aaatacataactaagnatgatacatttgcttcgat-ctggtgatggtatcaagattgttg 86 |||||||||| |||| |||||||||| ||||| || | | |||||||||||||||| || Sbjct: 546 aaatacataagtaag-atgatacattggcttccatacagctgatggtatcaagattattc 488 Query: 87 aacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattagg 146 || | |||||||||| |||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 487 aagacaaaatgacaatacgaccatggccatagaaatcatgcacaagaaggcatgattagg 428 Query: 147 cttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcaga 206 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 427 cttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcaga 368 Query: 207 gtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgg 266 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 367 gtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcacagacag 308 Query: 267 aagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaa 326 || ||||||||||||| |||||||||| || ||| ||||||||||||||||||||||| Sbjct: 307 aattcctgcatccaatggtgcagtactgcgtgacatctggttcaccggattcagggagaa 248 Query: 327 gattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaag 386 ||||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| ||||| Sbjct: 247 gattcagtttaggatagtcactagggcattttggaccacttatgattttacaacgacaag 188 Query: 387 cagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgc 446 || |||||||||||| ||||||||||| |||||| |||| | ||||||||||||||| Sbjct: 187 cacctgcgcagactggacgggaaccacccgcgaaatggcaagtgttgtagcagtttctag 128 Query: 447 ccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaaaccca 506 | ||||| |||||||||||| || || || || ||||||||||||||||||||||||| Sbjct: 127 ctaacgtgtccttgcagcaactttttccctccacctggacctgctccagaactaaaccca 68 Query: 507 atatgagaacacaaat 522 ||||||||||||||| Sbjct: 67 gtatgagaacacaaat 52
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 432 bits (218), Expect = e-118 Identities = 324/358 (90%), Gaps = 1/358 (0%) Strand = Plus / Minus Query: 44 atgatacatttgcttcgat-ctggtgatggtatcaagattgttgaacagaaaatgacaaa 102 ||||||||||| ||||||| | | |||||||||||||||| || || | |||||||||| Sbjct: 358 atgatacatttccttcgatacagctgatggtatcaagattattcaagacaaaatgacaat 299 Query: 103 acgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaat 162 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 298 acgaccttggccatagaaatcatgcacaagaaggcatgattaggattcaacagactgaat 239 Query: 163 gacatcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 222 ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gactgcaccatcattacaaaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 179 Query: 223 catctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaat 282 ||||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 178 catctcttggccatggaaaacattgtccatgttgtcacagacagaattcctgcatccaat 119 Query: 283 tgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggata 342 |||||||||| ||| ||| |||||||||||||||||||||||||| || |||||||| Sbjct: 118 ggtgcagtactgagtgacatcgggttcaccggattcagggagaagattaagtttaggata 59 Query: 343 gtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagact 400 ||| ||||| ||| |||| || |||||||||||||||| ||||||| |||||||||| Sbjct: 58 gtcactagggcattttggaccacttatgattttacaacgacaagcacctgcgcagact 1
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 414 bits (209), Expect = e-112 Identities = 212/213 (99%) Strand = Plus / Minus Query: 310 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 369 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 370 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 490 ctccagaactaaacccaatatgagaacacaaat 522 ||||||||||||||||||||||||||||||||| Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaat 1585 Score = 349 bits (176), Expect = 6e-93 Identities = 182/184 (98%) Strand = Plus / Minus Query: 60 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 2178 Query: 120 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattac 179 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2177 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 2118 Query: 180 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggg 239 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2117 agaaacgggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacggg 2058 Query: 240 aaac 243 |||| Sbjct: 2057 aaac 2054 Score = 123 bits (62), Expect = 6e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 243 cattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcat 302 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 303 ttggttcacc 312 |||||||||| Sbjct: 1903 ttggttcacc 1894
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 287 bits (145), Expect = 2e-74 Identities = 201/217 (92%), Gaps = 2/217 (0%) Strand = Plus / Minus Query: 28 aaatacataactaagnatgatacatttgcttcgat-ctggtgatggtatcaagattgttg 86 |||||||||| |||| |||||||||| ||||| || | | |||||||||||||||| || Sbjct: 2246 aaatacataagtaag-atgatacattggcttccatacagctgatggtatcaagattattc 2188 Query: 87 aacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattagg 146 || | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2187 aagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcatgattagg 2128 Query: 147 cttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcaga 206 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2127 cttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcaga 2068 Query: 207 gtcccatgtcgaatttcatctcttggccacgggaaac 243 |||||||||||||||||||||||||||||||| |||| Sbjct: 2067 gtcccatgtcgaatttcatctcttggccacggaaaac 2031 Score = 216 bits (109), Expect = 5e-53 Identities = 187/213 (87%) Strand = Plus / Minus Query: 310 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 369 |||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || ||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 370 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 429 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| | ||||| |||||||||||| || || || || |||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 490 ctccagaactaaacccaatatgagaacacaaat 522 ||||||||||||| ||| ||||||||||||||| Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaat 1564 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 243 cattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcat 302 |||||||||||||||||||||| ||| || |||||||||| |||||||||| ||| ||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 303 ttggttcacc 312 ||||||||| Sbjct: 1877 ctggttcacc 1868
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 188 bits (95), Expect = 1e-44 Identities = 337/417 (80%), Gaps = 3/417 (0%) Strand = Plus / Minus Query: 105 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 164 ||||| ||||| ||||||||||| ||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 165 catcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 224 | |||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 225 tctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattg 284 ||||||||||| | ||||||||||||||||||||| ||||||||| ||||||| || | Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 285 tgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagt 344 ||||||||||||| ||| ||||||||||||||| | ||||||| ||| |||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257 Query: 345 ccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactggtc 404 | |||||||||| ||| || ||||||||| |||||| || ||||||| ||| | Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200 Query: 405 gggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagc 464 ||||| ||||| ||||||||| |||| ||||||||||| | | ||| || ||||| Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttcttgcagatgtgctcgggcagc 140 Query: 465 aactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaa 521 ||||||| || ||||| ||||||||| ||||||||||||| | || ||| ||||||| Sbjct: 139 aactctttccctctacctggacctgccccagaactaaacctagtacgaggacacaaa 83
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 167 bits (84), Expect = 5e-38 Identities = 213/256 (83%) Strand = Plus / Minus Query: 251 atgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttca 310 ||||||||||| ||||||||| |||||||||| ||||||||||||| |||| || |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 311 ccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatg 370 ||| |||||| |||||||| | | ||||| | || || ||||| |||| || || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 371 attttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcg 430 | |||||||||||| | | |||||||||||| || | | |||| || ||||||||| | Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 431 ttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgc 490 |||||||||||| | |||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 491 tccagaactaaaccca 506 |||||||||||||||| Sbjct: 146 tccagaactaaaccca 131 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 94 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 153 |||| |||||||||| ||||||||||||| | || | ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 154 agactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 213 ||| || |||| |||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 214 gtcgaatttcatctcttggccacg 237 ||||| ||||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggccacg 415
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 99.6 bits (50), Expect = 9e-18 Identities = 83/94 (88%) Strand = Plus / Minus Query: 429 cgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacct 488 |||||||||||||||| |||| |||| ||||||||||||||| || ||||||||||| | Sbjct: 149 cgttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacat 90 Query: 489 gctccagaactaaacccaatatgagaacacaaat 522 |||||||||||| ||||||| ||||||||||| Sbjct: 89 gctccagaactatccccaatacaagaacacaaat 56
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 490 ctccagaactaaacccaatatgag 513 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 130 Query: 490 ctccagaactaaacccaatatgag 513 |||||||| || |||| |||||| Sbjct: 129 ttccagaaccaaccccagtatgag 106
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 73 Query: 490 ctccagaactaaacccaatatgag 513 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 490 ctccagaactaaacccaatatgag 513 |||||||| || |||| |||||| Sbjct: 80 ttccagaaccaaccccagtatgag 57
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 118 Query: 490 ctccagaactaaacccaatatgag 513 |||||||| || |||| |||||| Sbjct: 117 ttccagaaccaaccccagtatgag 94
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 457 cttgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaac 516 ||||||||||||||| || ||||||||||||||||||||||||| ||||||| || || Sbjct: 122 cttgcagcaactctttccctctacttggacctgctccagaactatccccaatacaaggac 63 Query: 517 acaaat 522 |||||| Sbjct: 62 acaaat 57
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| || ||| |||||||||||||||| ||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctacttgcacctg 73 Query: 490 ctccagaactaaacccaatatgag 513 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin Length = 535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 459 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgag 513 ||||||||||||||||||||||||| || || |||||||| || |||| |||||| Sbjct: 127 tgcagcaactcttgccttctacttgcacatgttccagaaccaaccccagtatgag 73
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin Length = 569 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 107 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 48 Query: 490 ctccagaac 498 || ||||| Sbjct: 47 ttcgagaac 39
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds Length = 1805 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 485 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 426 Query: 490 ctccagaac 498 || ||||| Sbjct: 425 ttcgagaac 417
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring Length = 888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 132 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 73 Query: 490 ctccagaactaaacccaatatgag 513 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin Length = 567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 430 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 489 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 91 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 32 Query: 490 ctccagaactaaacccaatatgag 513 |||||||| || |||| |||||| Sbjct: 31 ttccagaaccaaccccagtatgag 8
>emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 in linkage group 14, complete sequence Length = 137130 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 atgacatcaccatcattacagaaac 185 |||||||||||||||||||| |||| Sbjct: 27486 atgacatcaccatcattacataaac 27462
>emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, complete sequence Length = 201461 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 atgacatcaccatcattacagaaac 185 |||||||||||||||||||| |||| Sbjct: 188699 atgacatcaccatcattacataaac 188723
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 caagattgttgaacagaaaat 96 ||||||||||||||||||||| Sbjct: 6740764 caagattgttgaacagaaaat 6740784
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 caagattgttgaacagaaaat 96 ||||||||||||||||||||| Sbjct: 61817 caagattgttgaacagaaaat 61837
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 cgtgttcttgcagcaactct 470 |||||||||||||||||||| Sbjct: 947 cgtgttcttgcagcaactct 966
>gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, complete sequence Length = 206087 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 atgacatcaccatcattaca 180 |||||||||||||||||||| Sbjct: 32100 atgacatcaccatcattaca 32119
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 cgtgttcttgcagcaactct 470 |||||||||||||||||||| Sbjct: 54209 cgtgttcttgcagcaactct 54190
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 aacccaatatgagaacacaa 520 |||||||||||||||||||| Sbjct: 112938 aacccaatatgagaacacaa 112957
>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence Length = 177721 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagattgttgaacagaaaat 96 |||||||||||||||||||| Sbjct: 113658 aagattgttgaacagaaaat 113677
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 atgacatcaccatcattaca 180 |||||||||||||||||||| Sbjct: 52069 atgacatcaccatcattaca 52050
>gb|AC133435.2| Homo sapiens 3 BAC RP11-343B5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116556 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cagactgaatgacatcacca 172 |||||||||||||||||||| Sbjct: 64821 cagactgaatgacatcacca 64802
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence Length = 172551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 aacccaatatgagaacacaa 520 |||||||||||||||||||| Sbjct: 31644 aacccaatatgagaacacaa 31663
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 atgacatcaccatcattaca 180 |||||||||||||||||||| Sbjct: 34723 atgacatcaccatcattaca 34704
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 ccttggccatagaaatcatgccca 130 |||||||||| ||||||||||||| Sbjct: 862 ccttggccattgaaatcatgccca 839
>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence Length = 179814 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagattgttgaacagaaaat 96 |||||||||||||||||||| Sbjct: 3697 aagattgttgaacagaaaat 3716 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,821,074 Number of Sequences: 3902068 Number of extensions: 3821074 Number of successful extensions: 66245 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66140 Number of HSP's gapped (non-prelim): 90 length of query: 523 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 500 effective length of database: 17,143,297,704 effective search space: 8571648852000 effective search space used: 8571648852000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)