Clone Name | rbasd24m17 |
---|---|
Clone Library Name | barley_pub |
>ADH1_PICST (O00097) Alcohol dehydrogenase 1 (EC 1.1.1.1) (Alcohol| dehydrogenase I) (ADH 2) Length = 348 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = +1 Query: 130 ICMERINHWRALWPLQHRI-----NPSPGLFRSHGSRDVXWDLPSEGGSTLVCNALLVCF 294 +C ++ W+ WPL ++ + G+ GS W+L G + + L C Sbjct: 43 VCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNC- 101 Query: 295 HLYCQYSCRPDC 330 +CQ+S P+C Sbjct: 102 -EFCQHSDEPNC 112
>PAPPA_MOUSE (Q8R4K8) Pappalysin-1 precursor (EC 3.4.24.79) (Pregnancy-associated| plasma protein-A) (PAPP-A) (Insulin-like growth factor-dependent IGF-binding protein 4 protease) (IGF-dependent IGFBP-4 protease) (IGFBP-4ase) Length = 1624 Score = 30.0 bits (66), Expect = 7.2 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -3 Query: 361 YHNPGSDMSDSNQACKNTGNTDGSKPRGHCIP 266 YH PGS +A K DGS G C+P Sbjct: 1378 YHVPGSSRKSKKRAFKTQCTQDGSWQEGTCVP 1409
>Y14K_CSMV (P18920) Hypothetical 14.5 kDa protein| Length = 140 Score = 30.0 bits (66), Expect = 7.2 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 10/62 (16%) Frame = +1 Query: 220 SRDVXWDLPSEGGS--------TLVCNALLV--CFHLYCQYSCRPDCYRTYHFLDYGMSA 369 SR + PS G S LVC A +V C ++ +C DC Y DYG Sbjct: 37 SRSGSVEQPSPGASFAFPVKVTALVCFAAIVGACILVFLYKTCIADCITQYRLTDYGCHT 96 Query: 370 SS 375 S+ Sbjct: 97 SA 98
>PAPPA_HUMAN (Q13219) Pappalysin-1 precursor (EC 3.4.24.79) (Pregnancy-associated| plasma protein-A) (PAPP-A) (Insulin-like growth factor-dependent IGF-binding protein 4 protease) (IGF-dependent IGFBP-4 protease) (IGFBP-4ase) Length = 1628 Score = 30.0 bits (66), Expect = 7.2 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -3 Query: 361 YHNPGSDMSDSNQACKNTGNTDGSKPRGHCIP 266 YH PGS +A K DGS G C+P Sbjct: 1382 YHVPGSSRKSKKRAFKTQCTQDGSWQEGACVP 1413
>MOK12_SCHPO (Q9UUL4) Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)| Length = 2352 Score = 29.6 bits (65), Expect = 9.4 Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 10/117 (8%) Frame = +3 Query: 258 EHFGMQCPLGLLPSVLPVFLQA*LLSDISLPGLW---------YVCLIASAISLELIDAY 410 ++ G PL LLP V+PV + L + GLW VC I + I ++ Y Sbjct: 1308 DYHGALAPLYLLPEVIPVAVS---LHNAEFQGLWPLRTSAELECVCSIFN-IEKDICTKY 1363 Query: 411 TQL-HLF*LQHCCDASHNNAQTYP*GCLAA*SKPPVSQELTYYKTFMSFLLCQGSPN 578 Q H+F L H S+ G +A S Q L+ Y F S + G PN Sbjct: 1364 VQFGHVFNLLHSI-ISYVRKHQGGYGVVAV-SDKYSKQTLSRYPIFWSLVHISGLPN 1418 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 108,103,636 Number of Sequences: 219361 Number of extensions: 2358234 Number of successful extensions: 5944 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5693 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5942 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7082949625 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)