ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25b15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185069.1| Oryza sativa (japonica cultivar-group), mRNA Length = 995 Score = 396 bits (200), Expect = e-107 Identities = 332/376 (88%) Strand = Plus / Minus Query: 161 atggaactgcccatctcatggaatagcagccttgatgctcttggcgtactcttctattct 220 ||||||| || ||||||| || ||||||||||| ||| ||||||| |||||||||| ||| Sbjct: 855 atggaaccgctcatctcaaggcatagcagccttcatgttcttggcatactcttctactct 796 Query: 221 tctcagtccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaat 280 | ||| ||||||||||| ||||| || || || ||||||||||| || || ||||| || Sbjct: 795 tttcaacccttcttcaggtgaagcagcctctcctaactgtctaacaatagcgctgccgat 736 Query: 281 aatcacaccatccgctccccagcttgcgatctgcttcgcatgctctggagttgatatgcc 340 ||||||||||| |||||||||| ||| |||||||| ||||||||||||| |||||||| Sbjct: 735 gatcacaccatctgctccccagcctgcaatctgctttacatgctctggagtcgatatgcc 676 Query: 341 aaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaagaagatgctcaac 400 |||||||||||| ||||||||||||||||||| |||||||||||||||||| | |||||| Sbjct: 675 aaagccaacagcaacaggtttgtctgtaaccttcttgatctcctgaagaaggtactcaac 616 Query: 401 gcgtaggtttacatttgagcgtgcacctgtaactccgacagcactcacaagataaacgaa 460 || | ||||||||||||||||||||||||||||| |||| ||| |||||||||| || Sbjct: 615 acgcaaatttacatttgagcgtgcacctgtaactccaacagaacttacaagataaataaa 556 Query: 461 tccttctgaagcttttgtgatttccttcatcctctctgttggtgtggttggtgttgtaag 520 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 555 tccttctgaagcttttgcaatctccttcatcctctctgttggtgtggttggtgttgtaag 496 Query: 521 tagcaccagctctatg 536 ||||||||||||||| Sbjct: 495 cagcaccagctctatg 480
>dbj|AK073440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F03, full insert sequence Length = 1284 Score = 396 bits (200), Expect = e-107 Identities = 332/376 (88%) Strand = Plus / Minus Query: 161 atggaactgcccatctcatggaatagcagccttgatgctcttggcgtactcttctattct 220 ||||||| || ||||||| || ||||||||||| ||| ||||||| |||||||||| ||| Sbjct: 1023 atggaaccgctcatctcaaggcatagcagccttcatgttcttggcatactcttctactct 964 Query: 221 tctcagtccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaat 280 | ||| ||||||||||| ||||| || || || ||||||||||| || || ||||| || Sbjct: 963 tttcaacccttcttcaggtgaagcagcctctcctaactgtctaacaatagcgctgccgat 904 Query: 281 aatcacaccatccgctccccagcttgcgatctgcttcgcatgctctggagttgatatgcc 340 ||||||||||| |||||||||| ||| |||||||| ||||||||||||| |||||||| Sbjct: 903 gatcacaccatctgctccccagcctgcaatctgctttacatgctctggagtcgatatgcc 844 Query: 341 aaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaagaagatgctcaac 400 |||||||||||| ||||||||||||||||||| |||||||||||||||||| | |||||| Sbjct: 843 aaagccaacagcaacaggtttgtctgtaaccttcttgatctcctgaagaaggtactcaac 784 Query: 401 gcgtaggtttacatttgagcgtgcacctgtaactccgacagcactcacaagataaacgaa 460 || | ||||||||||||||||||||||||||||| |||| ||| |||||||||| || Sbjct: 783 acgcaaatttacatttgagcgtgcacctgtaactccaacagaacttacaagataaataaa 724 Query: 461 tccttctgaagcttttgtgatttccttcatcctctctgttggtgtggttggtgttgtaag 520 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 723 tccttctgaagcttttgcaatctccttcatcctctctgttggtgtggttggtgttgtaag 664 Query: 521 tagcaccagctctatg 536 ||||||||||||||| Sbjct: 663 cagcaccagctctatg 648
>gb|AF271384.1|AF271384 Zea mays putative tryptophan synthase alpha (TSAlike) mRNA, complete cds Length = 1447 Score = 252 bits (127), Expect = 1e-63 Identities = 316/379 (83%) Strand = Plus / Minus Query: 183 atagcagccttgatgctcttggcgtactcttctattcttctcagtccttcttcaggagaa 242 ||||||||||| || ||| |||||||||| || | ||| ||| || |||||||||| | Sbjct: 1013 atagcagccttcatactcctggcgtactcctcgagcctttccagaccctcttcaggagta 954 Query: 243 gcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgctccccag 302 || || || | |||||| | || || |||||||||| ||||||||| |||||||||||| Sbjct: 953 gcagcctcacacaactgcttcacaatcgcactgccaacaatcacaccgtccgctccccag 894 Query: 303 cttgcgatctgcttcgcatgctctggagttgatatgccaaagccaacagccacaggtttg 362 | ||||||| ||| ||||||||||||| |||| || || |||||||| || |||||| Sbjct: 893 cccacgatctgtttcacatgctctggagtcgatacaccgaaaccaacagctaccggtttg 834 Query: 363 tctgtaacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacatttgagcgt 422 |||||||||| |||||||||| |||||| || || || |||| |||||||||||||||| Sbjct: 833 tctgtaaccttcttgatctccctaagaaggtgttctacacgtaagtttacatttgagcgt 774 Query: 423 gcacctgtaactccgacagcactcacaagataaacgaatccttctgaagcttttgtgatt 482 ||||||||||| || ||||| ||||||||||| | |||||||||||||||| || ||| Sbjct: 773 gcacctgtaacccctacagcgctcacaagatagagaaatccttctgaagcttgtgcaatt 714 Query: 483 tccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctctatgttatgc 542 ||||||||| ||||| || |||||||| |||||||| ||||||||||||||||| ||| Sbjct: 713 cccttcatccgatctgtcggcgtggttggcgttgtaagcagcaccagctctatgttgtgc 654 Query: 543 atagttgcctcactcctca 561 ||| | ||||| ||||||| Sbjct: 653 ataatggcctcgctcctca 635
>gb|AY103922.1| Zea mays PCO082497 mRNA sequence Length = 1364 Score = 252 bits (127), Expect = 1e-63 Identities = 316/379 (83%) Strand = Plus / Minus Query: 183 atagcagccttgatgctcttggcgtactcttctattcttctcagtccttcttcaggagaa 242 ||||||||||| || ||| |||||||||| || | ||| ||| || |||||||||| | Sbjct: 1006 atagcagccttcatactcctggcgtactcctcgagcctttccagaccctcttcaggagta 947 Query: 243 gcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgctccccag 302 || || || | |||||| | || || |||||||||| ||||||||| |||||||||||| Sbjct: 946 gcagcctcacacaactgcttcacaatcgcactgccaacaatcacaccgtccgctccccag 887 Query: 303 cttgcgatctgcttcgcatgctctggagttgatatgccaaagccaacagccacaggtttg 362 | ||||||| ||| ||||||||||||| |||| || || |||||||| || |||||| Sbjct: 886 cccacgatctgtttcacatgctctggagtcgatacaccgaaaccaacagctaccggtttg 827 Query: 363 tctgtaacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacatttgagcgt 422 |||||||||| |||||||||| |||||| || || || |||| |||||||||||||||| Sbjct: 826 tctgtaaccttcttgatctccctaagaaggtgttctacacgtaagtttacatttgagcgt 767 Query: 423 gcacctgtaactccgacagcactcacaagataaacgaatccttctgaagcttttgtgatt 482 ||||||||||| || ||||| ||||||||||| | |||||||||||||||| || ||| Sbjct: 766 gcacctgtaacccctacagcgctcacaagatagagaaatccttctgaagcttgtgcaatt 707 Query: 483 tccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctctatgttatgc 542 ||||||||| ||||| || |||||||| |||||||| ||||||||||||||||| ||| Sbjct: 706 cccttcatccgatctgtcggcgtggttggcgttgtaagcagcaccagctctatgttgtgc 647 Query: 543 atagttgcctcactcctca 561 ||| | ||||| ||||||| Sbjct: 646 ataatggcctcgctcctca 628
>gb|BT009154.1| Triticum aestivum clone wl1n.pk0067.f2:fis, full insert mRNA sequence Length = 514 Score = 246 bits (124), Expect = 7e-62 Identities = 250/292 (85%) Strand = Plus / Minus Query: 270 gcactgccaataatcacaccatccgctccccagcttgcgatctgcttcgcatgctctgga 329 |||||||||| ||||||||| ||||||||||||| ||||||| ||| ||||||||||| Sbjct: 462 gcactgccaacaatcacaccgtccgctccccagcccacgatctgtttcacatgctctgga 403 Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 || |||| || || |||||||| || |||||||||||||||| |||||||||| |||| Sbjct: 402 gtcgatacaccgaaaccaacagctaccggtttgtctgtaaccttcttgatctccctaaga 343 Query: 390 agatgctcaacgcgtaggtttacatttgagcgtgcacctgtaactccgacagcactcaca 449 || || || || |||| ||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 342 aggtgttctacacgtaagtttacatttgagcgtgcacctgtaacccctacagcgctcaca 283 Query: 450 agataaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgtggtt 509 ||||| | |||||||||||||||| || ||| ||||||||| ||||| || |||||| Sbjct: 282 agatagagaaatccttctgaagcttgtgcaattcccttcatccgatctgtcggcgtggtt 223 Query: 510 ggtgttgtaagtagcaccagctctatgttatgcatagttgcctcactcctca 561 || |||||||| ||||||||||||||||| |||||| | ||||| ||||||| Sbjct: 222 ggcgttgtaagcagcaccagctctatgttgtgcataatggcctcgctcctca 171
>ref|NM_185066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 981 Score = 139 bits (70), Expect = 1e-29 Identities = 241/298 (80%) Strand = Plus / Minus Query: 237 ggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgct 296 |||||||| ||||| || | ||| || || |||||||| ||||| ||||| ||||| || Sbjct: 920 ggagaagctgcttcacctagctgcctcaccattgcactcccaatgatcactccatctgca 861 Query: 297 ccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagccaacagccaca 356 ||||| | ||| |||||| | |||| || || ||||||||||||||||||||| |||| Sbjct: 860 ccccaccctgctatctgcctaacatggtcaggggttgatatgccaaagccaacacacaca 801 Query: 357 ggtttgtctgtaacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacattt 416 | |||||| || ||| ||||||| |||||||| ||||||||||||||| |||||| ||| Sbjct: 800 gctttgtcagtgaccagcttgatgtcctgaaggagatgctcaacgcgtgtgtttactttt 741 Query: 417 gagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttctgaagctttt 476 | || | ||| |||||||| |||| ||||| ||||| |||||| ||||||||| | Sbjct: 740 ggacggggacccgtaactccattgacactaacaaggtaaacaaatcctcctgaagcttct 681 Query: 477 gtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctcta 534 ||||| ||||||||||||| ||||| | ||||||||| || ||||||||||||| Sbjct: 680 gtgatgatcttcatcctctctcccggtgtagctggtgttgttagcagcaccagctcta 623
>gb|AY462226.1| Hordeum lechleri indole-3-glycerol phosphate lyase mRNA, partial cds Length = 979 Score = 125 bits (63), Expect = 2e-25 Identities = 246/307 (80%) Strand = Plus / Minus Query: 228 ccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcaca 287 |||||||| |||||||| ||||| || ||||| | || ||||||||||| || ||||| Sbjct: 791 ccttcttctggagaagctgcttcacctaactgcttcaccattgcactgccgatgatcact 732 Query: 288 ccatccgctccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagcca 347 ||||| || ||||| ||| |||||||| |||| || || || || || ||||||||| Sbjct: 731 ccatctgcaccccactctgcaatctgcttaacatggtcaggggtcgaaattccaaagcca 672 Query: 348 acagccacaggtttgtctgtaacctgcttgatctcctgaagaagatgctcaacgcgtagg 407 |||||||| | ||||| || |||||||| |||| || ||||||| ||| |||||| || Sbjct: 671 acagccactgccttgtcagtgacctgcttaatcttcttaagaagactctcgacgcgtggg 612 Query: 408 tttacatttgagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttct 467 || || ||| || ||||| |||||||| | |||| ||||| |||||||| ||| || Sbjct: 611 ttcacggttgcacgggcacccctaactccgtcgacacttacaaggtaaacgaagcctcct 552 Query: 468 gaagcttttgtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcacc 527 ||||||| ||||| |||||||||||||||| ||||| | |||||||||||||| ||| Sbjct: 551 gaagcttcagtgatctccttcatcctctctggcggtgtagatggtgttgtaagtaaaacc 492 Query: 528 agctcta 534 ||||||| Sbjct: 491 agctcta 485
>ref|NM_185065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 115 bits (58), Expect = 2e-22 Identities = 238/298 (79%) Strand = Plus / Minus Query: 237 ggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgct 296 |||||||| ||||| |||| ||| || || |||||||||||||| ||||| ||||| || Sbjct: 1033 ggagaagctgcttcacccagctgcctcaccattgcactgccaatgatcaccccatctgca 974 Query: 297 ccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagccaacagccaca 356 ||||| ||| ||||| | |||| || || |||||||||||| |||||||| |||| Sbjct: 973 ccccactctgctatctgtctaacatgatcaggggttgatatgccatagccaacacacaca 914 Query: 357 ggtttgtctgtaacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacattt 416 | |||||| || |||||||| ||||||||||| ||||||||||| || |||| || | | Sbjct: 913 gctttgtcagtgacctgcttaatctcctgaaggagatgctcaacacgcgggttcacgtct 854 Query: 417 gagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttctgaagctttt 476 ||| | ||||||||||| |||| || || ||||| |||||| |||| || | Sbjct: 853 tggcgagatcctgtaactccattgacactaaccaggtaaacaaatcctcctgaggcggct 794 Query: 477 gtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctcta 534 |||||| |||||||||| |||| |||||| |||||||| ||||| ||||||||||||| Sbjct: 793 gtgattgccttcatcctgtctggtggtgtagttggtgtagtaagcagcaccagctcta 736
>ref|XM_476874.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1160 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Minus Query: 227 tccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcac 286 ||||||||| || ||||| ||||||||||| || || || || || || ||||| ||||| Sbjct: 1017 tccttcttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcac 958 Query: 287 accatccgctccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagcc 346 |||||| || ||||| | || ||||||||| ||||||||||||| ||||| || || || Sbjct: 957 accatctgcgccccatcccgcaatctgcttcacatgctctggagtcgatataccgaaccc 898 Query: 347 aacagccacaggtttgtctgtaacctgcttgatctcctgaagaaga 392 ||||||||||| |||||| || ||||||||||| ||||| |||||| Sbjct: 897 aacagccacagctttgtccgtgacctgcttgatatcctggagaaga 852 Score = 115 bits (58), Expect = 2e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 411 acatttgagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttctgaa 470 ||||||| ||||||||||||||||| |||| || |||||||||| |||||||| ||| Sbjct: 833 acatttgcacgtgcacctgtaactccaacagtgcttacaagataaataaatccttcagaa 774 Query: 471 gcttttgtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagc 530 |||||||| |||| || ||| || ||||||||||| ||||||||||| |||||||||||| Sbjct: 773 gcttttgtaattttctccattctttctgttggtgtagttggtgttgtcagtagcaccagc 714 Query: 531 tc 532 || Sbjct: 713 tc 712
>ref|XM_506200.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1506_G02.1 patrial mRNA Length = 1161 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Minus Query: 227 tccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcac 286 ||||||||| || ||||| ||||||||||| || || || || || || ||||| ||||| Sbjct: 1018 tccttcttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcac 959 Query: 287 accatccgctccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagcc 346 |||||| || ||||| | || ||||||||| ||||||||||||| ||||| || || || Sbjct: 958 accatctgcgccccatcccgcaatctgcttcacatgctctggagtcgatataccgaaccc 899 Query: 347 aacagccacaggtttgtctgtaacctgcttgatctcctgaagaaga 392 ||||||||||| |||||| || ||||||||||| ||||| |||||| Sbjct: 898 aacagccacagctttgtccgtgacctgcttgatatcctggagaaga 853 Score = 115 bits (58), Expect = 2e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 411 acatttgagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttctgaa 470 ||||||| ||||||||||||||||| |||| || |||||||||| |||||||| ||| Sbjct: 834 acatttgcacgtgcacctgtaactccaacagtgcttacaagataaataaatccttcagaa 775 Query: 471 gcttttgtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagc 530 |||||||| |||| || ||| || ||||||||||| ||||||||||| |||||||||||| Sbjct: 774 gcttttgtaattttctccattctttctgttggtgtagttggtgttgtcagtagcaccagc 715 Query: 531 tc 532 || Sbjct: 714 tc 713
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 446 cacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgt 505 ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 32891751 cacaagataaataaatccttctgaagcttttgcaatctccttcatcctctctgttggtgt 32891810 Query: 506 ggttggtgttgtaagtagcacc 527 ||||||||||||||| |||||| Sbjct: 32891811 ggttggtgttgtaagcagcacc 32891832 Score = 113 bits (57), Expect = 7e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 161 atggaactgcccatctcatggaatagcagccttgatgctcttggcgtactcttctattct 220 ||||||| || ||||||| || ||||||||||| ||| ||||||| |||||||||| ||| Sbjct: 32890879 atggaaccgctcatctcaaggcatagcagccttcatgttcttggcatactcttctactct 32890938 Query: 221 tctcagtccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaat 280 | ||| ||||||||||| ||||| || || || ||||||||||| || || ||||| || Sbjct: 32890939 tttcaacccttcttcaggtgaagcagcctctcctaactgtctaacaatagcgctgccgat 32890998 Query: 281 aatcacaccatccgctccccagcttgcgatctg 313 ||||||||||| |||||||||| ||| ||||| Sbjct: 32890999 gatcacaccatctgctccccagcctgcaatctg 32891031 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 319 catgctctggagttgatatgccaaagccaacagccacaggtttgtctgtaacctg 373 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 32891117 catgctctggagtcgatatgccaaagccaacagcaacaggtttgtctgtaacctg 32891171 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 ||||||||||||||||||||| ||||| |||||| || ||| ||||||| |||||||| Sbjct: 32904468 gttgatatgccaaagccaacacacacagctttgtcagtgaccagcttgatgtcctgaagg 32904527 Query: 390 agatgctcaacgcgtaggtttacatttg 417 ||||||||||||||| |||||| |||| Sbjct: 32904528 agatgctcaacgcgtgtgtttacttttg 32904555 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 ||||||||||||||||||||| ||||| |||||| || |||||||| ||||||||||| Sbjct: 32923063 gttgatatgccaaagccaacacacacagctttgtcagtgacctgcttaatctcctgaagg 32923122 Query: 390 agatgctcaac 400 ||||||||||| Sbjct: 32923123 agatgctcaac 32923133 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 368 aacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacatttgagcgtgcacc 427 ||||| |||||||||||||||||| | |||||| || | |||||||||||||||||||| Sbjct: 32891287 aaccttcttgatctcctgaagaaggtactcaacacgcaaatttacatttgagcgtgcacc 32891346 Query: 428 tgtaactccgacag 441 ||||||||| |||| Sbjct: 32891347 tgtaactccaacag 32891360 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 |||||||||||| |||||||| ||||| |||||| || |||||||| ||||||||||| Sbjct: 32911136 gttgatatgccatagccaacacacacagctttgtcagtgacctgcttaatctcctgaagg 32911195 Query: 390 agatgctcaac 400 ||||||||||| Sbjct: 32911196 agatgctcaac 32911206 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 440 agcactcacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgt 499 |||||| ||||| ||||| |||||| ||||||||| |||||| ||||||||||||| Sbjct: 32904686 agcacttacaaggtaaacaaatcctcctgaagcttctgtgatgatcttcatcctctctcc 32904745 Query: 500 tggtgtggttggtgttgtaagtagcacc 527 ||||| | ||||||||| || |||||| Sbjct: 32904746 cggtgtagctggtgttgttagcagcacc 32904773 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 237 ggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgct 296 |||||||| ||||| |||| ||| || || |||||||||||||| ||||| ||||| || Sbjct: 32910944 ggagaagctgcttcacccagctgcctcaccattgcactgccaatgatcaccccatctgca 32911003 Query: 297 cccca 301 ||||| Sbjct: 32911004 cccca 32911008
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 446 cacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgt 505 ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 98424 cacaagataaataaatccttctgaagcttttgcaatctccttcatcctctctgttggtgt 98365 Query: 506 ggttggtgttgtaagtagcacc 527 ||||||||||||||| |||||| Sbjct: 98364 ggttggtgttgtaagcagcacc 98343 Score = 113 bits (57), Expect = 7e-22 Identities = 129/153 (84%) Strand = Plus / Minus Query: 161 atggaactgcccatctcatggaatagcagccttgatgctcttggcgtactcttctattct 220 ||||||| || ||||||| || ||||||||||| ||| ||||||| |||||||||| ||| Sbjct: 99296 atggaaccgctcatctcaaggcatagcagccttcatgttcttggcatactcttctactct 99237 Query: 221 tctcagtccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaat 280 | ||| ||||||||||| ||||| || || || ||||||||||| || || ||||| || Sbjct: 99236 tttcaacccttcttcaggtgaagcagcctctcctaactgtctaacaatagcgctgccgat 99177 Query: 281 aatcacaccatccgctccccagcttgcgatctg 313 ||||||||||| |||||||||| ||| ||||| Sbjct: 99176 gatcacaccatctgctccccagcctgcaatctg 99144 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 319 catgctctggagttgatatgccaaagccaacagccacaggtttgtctgtaacctg 373 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 99058 catgctctggagtcgatatgccaaagccaacagcaacaggtttgtctgtaacctg 99004 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 ||||||||||||||||||||| ||||| |||||| || ||| ||||||| |||||||| Sbjct: 85707 gttgatatgccaaagccaacacacacagctttgtcagtgaccagcttgatgtcctgaagg 85648 Query: 390 agatgctcaacgcgtaggtttacatttg 417 ||||||||||||||| |||||| |||| Sbjct: 85647 agatgctcaacgcgtgtgtttacttttg 85620 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 ||||||||||||||||||||| ||||| |||||| || |||||||| ||||||||||| Sbjct: 67112 gttgatatgccaaagccaacacacacagctttgtcagtgacctgcttaatctcctgaagg 67053 Query: 390 agatgctcaac 400 ||||||||||| Sbjct: 67052 agatgctcaac 67042 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 368 aacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacatttgagcgtgcacc 427 ||||| |||||||||||||||||| | |||||| || | |||||||||||||||||||| Sbjct: 98888 aaccttcttgatctcctgaagaaggtactcaacacgcaaatttacatttgagcgtgcacc 98829 Query: 428 tgtaactccgacag 441 ||||||||| |||| Sbjct: 98828 tgtaactccaacag 98815 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 |||||||||||| |||||||| ||||| |||||| || |||||||| ||||||||||| Sbjct: 79039 gttgatatgccatagccaacacacacagctttgtcagtgacctgcttaatctcctgaagg 78980 Query: 390 agatgctcaac 400 ||||||||||| Sbjct: 78979 agatgctcaac 78969 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 440 agcactcacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgt 499 |||||| ||||| ||||| |||||| ||||||||| |||||| ||||||||||||| Sbjct: 85489 agcacttacaaggtaaacaaatcctcctgaagcttctgtgatgatcttcatcctctctcc 85430 Query: 500 tggtgtggttggtgttgtaagtagcacc 527 ||||| | ||||||||| || |||||| Sbjct: 85429 cggtgtagctggtgttgttagcagcacc 85402 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 237 ggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgct 296 |||||||| ||||| |||| ||| || || |||||||||||||| ||||| ||||| || Sbjct: 79231 ggagaagctgcttcacccagctgcctcaccattgcactgccaatgatcaccccatctgca 79172 Query: 297 cccca 301 ||||| Sbjct: 79171 cccca 79167
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 446 cacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgt 505 ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 32982261 cacaagataaataaatccttctgaagcttttgcaatctccttcatcctctctgttggtgt 32982320 Query: 506 ggttggtgttgtaagtagcacc 527 ||||||||||||||| |||||| Sbjct: 32982321 ggttggtgttgtaagcagcacc 32982342 Score = 113 bits (57), Expect = 7e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 161 atggaactgcccatctcatggaatagcagccttgatgctcttggcgtactcttctattct 220 ||||||| || ||||||| || ||||||||||| ||| ||||||| |||||||||| ||| Sbjct: 32981389 atggaaccgctcatctcaaggcatagcagccttcatgttcttggcatactcttctactct 32981448 Query: 221 tctcagtccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaat 280 | ||| ||||||||||| ||||| || || || ||||||||||| || || ||||| || Sbjct: 32981449 tttcaacccttcttcaggtgaagcagcctctcctaactgtctaacaatagcgctgccgat 32981508 Query: 281 aatcacaccatccgctccccagcttgcgatctg 313 ||||||||||| |||||||||| ||| ||||| Sbjct: 32981509 gatcacaccatctgctccccagcctgcaatctg 32981541 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 319 catgctctggagttgatatgccaaagccaacagccacaggtttgtctgtaacctg 373 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 32981627 catgctctggagtcgatatgccaaagccaacagcaacaggtttgtctgtaacctg 32981681 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 ||||||||||||||||||||| ||||| |||||| || ||| ||||||| |||||||| Sbjct: 32994978 gttgatatgccaaagccaacacacacagctttgtcagtgaccagcttgatgtcctgaagg 32995037 Query: 390 agatgctcaacgcgtaggtttacatttg 417 ||||||||||||||| |||||| |||| Sbjct: 32995038 agatgctcaacgcgtgtgtttacttttg 32995065 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 ||||||||||||||||||||| ||||| |||||| || |||||||| ||||||||||| Sbjct: 33013573 gttgatatgccaaagccaacacacacagctttgtcagtgacctgcttaatctcctgaagg 33013632 Query: 390 agatgctcaac 400 ||||||||||| Sbjct: 33013633 agatgctcaac 33013643 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 368 aacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacatttgagcgtgcacc 427 ||||| |||||||||||||||||| | |||||| || | |||||||||||||||||||| Sbjct: 32981797 aaccttcttgatctcctgaagaaggtactcaacacgcaaatttacatttgagcgtgcacc 32981856 Query: 428 tgtaactccgacag 441 ||||||||| |||| Sbjct: 32981857 tgtaactccaacag 32981870 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 330 gttgatatgccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaaga 389 |||||||||||| |||||||| ||||| |||||| || |||||||| ||||||||||| Sbjct: 33001646 gttgatatgccatagccaacacacacagctttgtcagtgacctgcttaatctcctgaagg 33001705 Query: 390 agatgctcaac 400 ||||||||||| Sbjct: 33001706 agatgctcaac 33001716 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 440 agcactcacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgt 499 |||||| ||||| ||||| |||||| ||||||||| |||||| ||||||||||||| Sbjct: 32995196 agcacttacaaggtaaacaaatcctcctgaagcttctgtgatgatcttcatcctctctcc 32995255 Query: 500 tggtgtggttggtgttgtaagtagcacc 527 ||||| | ||||||||| || |||||| Sbjct: 32995256 cggtgtagctggtgttgttagcagcacc 32995283 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 237 ggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgct 296 |||||||| ||||| |||| ||| || || |||||||||||||| ||||| ||||| || Sbjct: 33001454 ggagaagctgcttcacccagctgcctcaccattgcactgccaatgatcaccccatctgca 33001513 Query: 297 cccca 301 ||||| Sbjct: 33001514 cccca 33001518
>dbj|AK104002.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-G11, full insert sequence Length = 1256 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Minus Query: 227 tccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcac 286 ||||||||| || ||||| ||||||||||| || || || || || || ||||| ||||| Sbjct: 1017 tccttcttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcac 958 Query: 287 accatccgctccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagcc 346 |||||| || ||||| | || ||||||||| ||||||||||||| ||||| || || || Sbjct: 957 accatctgcgccccatcccgcaatctgcttcacatgctctggagtcgatataccgaaccc 898 Query: 347 aacagccacaggtttgtctgtaacctgcttgatctcctgaagaaga 392 ||||||||||| |||||| || ||||||||||| ||||| |||||| Sbjct: 897 aacagccacagctttgtccgtgacctgcttgatatcctggagaaga 852 Score = 115 bits (58), Expect = 2e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 411 acatttgagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttctgaa 470 ||||||| ||||||||||||||||| |||| || |||||||||| |||||||| ||| Sbjct: 833 acatttgcacgtgcacctgtaactccaacagtgcttacaagataaataaatccttcagaa 774 Query: 471 gcttttgtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagc 530 |||||||| |||| || ||| || ||||||||||| ||||||||||| |||||||||||| Sbjct: 773 gcttttgtaattttctccattctttctgttggtgtagttggtgttgtcagtagcaccagc 714 Query: 531 tc 532 || Sbjct: 713 tc 712
>dbj|AK072595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E11, full insert sequence Length = 1372 Score = 115 bits (58), Expect = 2e-22 Identities = 238/298 (79%) Strand = Plus / Minus Query: 237 ggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgct 296 |||||||| ||||| |||| ||| || || |||||||||||||| ||||| ||||| || Sbjct: 1048 ggagaagctgcttcacccagctgcctcaccattgcactgccaatgatcaccccatctgca 989 Query: 297 ccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagccaacagccaca 356 ||||| ||| ||||| | |||| || || |||||||||||| |||||||| |||| Sbjct: 988 ccccactctgctatctgtctaacatgatcaggggttgatatgccatagccaacacacaca 929 Query: 357 ggtttgtctgtaacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacattt 416 | |||||| || |||||||| ||||||||||| ||||||||||| || |||| || | | Sbjct: 928 gctttgtcagtgacctgcttaatctcctgaaggagatgctcaacacgcgggttcacgtct 869 Query: 417 gagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttctgaagctttt 476 ||| | ||||||||||| |||| || || ||||| |||||| |||| || | Sbjct: 868 tggcgagatcctgtaactccattgacactaaccaggtaaacaaatcctcctgaggcggct 809 Query: 477 gtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctcta 534 |||||| |||||||||| |||| |||||| |||||||| ||||| ||||||||||||| Sbjct: 808 gtgattgccttcatcctgtctggtggtgtagttggtgtagtaagcagcaccagctcta 751
>dbj|AK066734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078I01, full insert sequence Length = 1257 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Minus Query: 227 tccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcac 286 ||||||||| || ||||| ||||||||||| || || || || || || ||||| ||||| Sbjct: 1018 tccttcttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcac 959 Query: 287 accatccgctccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagcc 346 |||||| || ||||| | || ||||||||| ||||||||||||| ||||| || || || Sbjct: 958 accatctgcgccccatcccgcaatctgcttcacatgctctggagtcgatataccgaaccc 899 Query: 347 aacagccacaggtttgtctgtaacctgcttgatctcctgaagaaga 392 ||||||||||| |||||| || ||||||||||| ||||| |||||| Sbjct: 898 aacagccacagctttgtccgtgacctgcttgatatcctggagaaga 853 Score = 115 bits (58), Expect = 2e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 411 acatttgagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttctgaa 470 ||||||| ||||||||||||||||| |||| || |||||||||| |||||||| ||| Sbjct: 834 acatttgcacgtgcacctgtaactccaacagtgcttacaagataaataaatccttcagaa 775 Query: 471 gcttttgtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagc 530 |||||||| |||| || ||| || ||||||||||| ||||||||||| |||||||||||| Sbjct: 774 gcttttgtaattttctccattctttctgttggtgtagttggtgttgtcagtagcaccagc 715 Query: 531 tc 532 || Sbjct: 714 tc 713
>dbj|AB124850.1| Triticum aestivum TaBx1-D mRNA for Indole synthase, complete cds Length = 1298 Score = 105 bits (53), Expect = 2e-19 Identities = 113/133 (84%) Strand = Plus / Minus Query: 240 gaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgctccc 299 ||||| ||||| |||||||| || || || ||||||||||| ||||| |||||||| ||| Sbjct: 936 gaagctgcttcacccaactgcctcaccatcgcactgccaatgatcaccccatccgcaccc 877 Query: 300 cagcttgcgatctgcttcgcatgctctggagttgatatgccaaagccaacagccacaggt 359 || ||||| |||||||| | || || || |||||||||||||||||||||| |||||| Sbjct: 876 catcttgcaatctgctttacgtgttcaggttttgatatgccaaagccaacagcaacaggt 817 Query: 360 ttgtctgtaacct 372 ||||| ||||||| Sbjct: 816 ttgtcagtaacct 804 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 453 taaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgtggttggt 512 |||| ||| ||||| |||||||| |||||||||||||| || ||| |||| ||| |||| Sbjct: 723 taaatgaaaccttccgaagctttcgtgatttccttcattctttcttctggtatggctggt 664 Query: 513 gttgtaagtagcaccagctc 532 ||||| || ||||||||||| Sbjct: 663 gttgtgagcagcaccagctc 644
>dbj|AB094060.1| Triticum aestivum TaBx1-A mRNA for indole synthase, complete cds Length = 1315 Score = 105 bits (53), Expect = 2e-19 Identities = 233/293 (79%) Strand = Plus / Minus Query: 240 gaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgctccc 299 ||||| ||||| |||||||| || || || ||||||||||| ||||| |||||||| ||| Sbjct: 934 gaagctgcttcacccaactgcctcaccatcgcactgccaatgatcaccccatccgcaccc 875 Query: 300 cagcttgcgatctgcttcgcatgctctggagttgatatgccaaagccaacagccacaggt 359 || | ||| |||||||| | || || || |||||||||||||||||||||| |||||| Sbjct: 874 catcctgcaatctgctttacgtgttcaggttttgatatgccaaagccaacagcaacaggt 815 Query: 360 ttgtctgtaacctgcttgatctcctgaagaagatgctcaacgcgtaggtttacatttgag 419 ||||| ||||||| || ||||| |||| || |||||| || ||||| || ||| Sbjct: 814 ttgtcagtaaccttttttatctcttgaatgagggactcaacccgcaggttcacgttttca 755 Query: 420 cgtgcacctgtaactccgacagcactcacaagataaacgaatccttctgaagcttttgtg 479 || | |||||||||||| | ||||| || |||| ||| ||||| |||||||| ||| Sbjct: 754 cggggacctgtaactccattgacgctcaccaggtaaatgaaaccttccgaagctttcgtg 695 Query: 480 atttccttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctc 532 ||| ||||||| || ||| |||| ||| ||||||||| || ||||||||||| Sbjct: 694 attcccttcattctttcttctggtatggctggtgttgtgagcagcaccagctc 642
>ref|NM_185063.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 103 bits (52), Expect = 6e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 237 ggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgct 296 |||||||| ||||| |||||||| || || ||||| |||||||| ||||| ||||| || Sbjct: 911 ggagaagctgcttcacccaactgcctcaccattgcgctgccaatgatcactccatctgca 852 Query: 297 ccccagcttgcgatctgcttcgcatgctctggagttgatatgccaaagccaacagccaca 356 ||||| ||| ||||| | |||| || || ||||||||||||||||||||| |||| Sbjct: 851 ccccaatctgctatctgtctaacatgatcaggggttgatatgccaaagccaacacacaca 792 Query: 357 ggtttgtctgtaacctgcttgatctcctgaagaagatgctcaac 400 | |||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 791 gctttgtcagtgacctgcttaatctcctgaaggagatgctcaac 748 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 450 agataaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgtggtt 509 |||||||| |||||| ||||||| ||||||| |||||||||| |||| ||||| | | Sbjct: 698 agataaacaaatcctcctgaagccgctgtgattgccttcatcctgtctgccggtgtagct 639 Query: 510 ggtgttgtaagtagcaccagctcta 534 ||||| ||||| ||||||||||||| Sbjct: 638 ggtgtagtaagcagcaccagctcta 614
>dbj|AB124849.1| Triticum aestivum TaBx1-B mRNA for Indole synthase, complete cds Length = 1308 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 213 tctattcttctcagtccttcttcaggagaagcggcttcgcccaactgtctaacgattgca 272 |||| |||| ||| |||||||| || ||||| ||||| || ||||| || || || ||| Sbjct: 969 tctagtcttttcaatccttctttgggcgaagctgcttcacctaactgcctcaccatcgca 910 Query: 273 ctgccaataatcacaccatccgctccccagcttgcgatctgcttcgcatgctctggagtt 332 |||||||| ||||| |||||||| ||||| | ||| |||||||| | || || || || Sbjct: 909 ctgccaatgatcaccccatccgcaccccaccctgcaatctgctttacgtgttcaggtttt 850 Query: 333 gatatgccaaagccaacagccacaggtttgtctgtaacct 372 |||||||||||||||||||| ||||||||||| ||||||| Sbjct: 849 gatatgccaaagccaacagcaacaggtttgtcagtaacct 810 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 444 ctcacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggt 503 ||||| || |||| ||| |||||||||||||| |||||||||||||| || ||| |||| Sbjct: 738 ctcaccaggtaaatgaaaccttctgaagctttcgtgatttccttcattctttcttctggt 679 Query: 504 gtggttggtgttgtaagtagcaccagctc 532 ||| ||||||||| || ||||||||||| Sbjct: 678 atggctggtgttgtgagcagcaccagctc 650
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 444 ctcacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggt 503 ||||||||||||| |||||||| ||||||||||| |||| || ||| || ||||||||| Sbjct: 4363547 ctcacaagataaataaatccttcagaagcttttgtaattttctccattctttctgttggt 4363606 Query: 504 gtggttggtgttgtaagtagcacc 527 || ||||||||||| ||||||||| Sbjct: 4363607 gtagttggtgttgtcagtagcacc 4363630 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 311 ctgcttcgcatgctctggagttgatatgccaaagccaacagccacaggtttgtc 364 ||||||| ||||||||||||| ||||| || || ||||||||||||| |||||| Sbjct: 4363072 ctgcttcacatgctctggagtcgatataccgaacccaacagccacagctttgtc 4363125 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Plus Query: 227 tccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcac 286 ||||||||| || ||||| ||||||||||| || || || || || || ||||| ||||| Sbjct: 4362894 tccttcttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcac 4362953 Query: 287 accatccgctcccca 301 |||||| || ||||| Sbjct: 4362954 accatctgcgcccca 4362968
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 444 ctcacaagataaacgaatccttctgaagcttttgtgatttccttcatcctctctgttggt 503 ||||||||||||| |||||||| ||||||||||| |||| || ||| || ||||||||| Sbjct: 3396 ctcacaagataaataaatccttcagaagcttttgtaattttctccattctttctgttggt 3455 Query: 504 gtggttggtgttgtaagtagcacc 527 || ||||||||||| ||||||||| Sbjct: 3456 gtagttggtgttgtcagtagcacc 3479 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 311 ctgcttcgcatgctctggagttgatatgccaaagccaacagccacaggtttgtc 364 ||||||| ||||||||||||| ||||| || || ||||||||||||| |||||| Sbjct: 2921 ctgcttcacatgctctggagtcgatataccgaacccaacagccacagctttgtc 2974 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Plus Query: 227 tccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcac 286 ||||||||| || ||||| ||||||||||| || || || || || || ||||| ||||| Sbjct: 2743 tccttcttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcac 2802 Query: 287 accatccgctcccca 301 |||||| || ||||| Sbjct: 2803 accatctgcgcccca 2817
>gb|AY107255.1| Zea mays PCO145511 mRNA sequence Length = 769 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 279 ataatcacaccatccgctccccagcttgcgatctgcttcgcatgctctggagttgatatg 338 |||||||||||||| || ||||| | ||| |||||| ||||||||||||| || | Sbjct: 511 ataatcacaccatctgcgccccatcctgcaatctgccggacatgctctggagtcgacaca 452 Query: 339 ccaaagccaacagccacaggtttgtctgtaacctgcttgatctcctgaagaaga 392 ||||||||||||||||| ||||| ||||| |||| |||||| |||||||||||| Sbjct: 451 ccaaagccaacagccacgggtttttctgtcaccttcttgatatcctgaagaaga 398 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Minus Query: 409 ttacatttgagcgtgcacctgtaactccgacagcactcacaagataaacgaatccttctg 468 ||||||||| |||| ||| |||||||| |||| || |||||||||| |||||||||| Sbjct: 381 ttacatttgcacgtgtaccagtaactccaacagtgcttacaagataaataaatccttctg 322 Query: 469 aagcttttgtgatttccttcatcctctctgttggtgtggttggtgttgtaagtagcacca 528 |||| | || |||| || ||| || || ||||||| || |||||||| | |||||||| Sbjct: 321 aagcctgtgcaattttctccattctttcatttggtgtagtcggtgttgtcaatagcacca 262 Query: 529 gctcta 534 |||||| Sbjct: 261 gctcta 256
>dbj|AK102456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094B09, full insert sequence Length = 2873 Score = 69.9 bits (35), Expect = 9e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 227 tccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcac 286 ||||||||| || ||||| ||||||||||| || || || || || || ||||| ||||| Sbjct: 2635 tccttcttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcac 2576 Query: 287 accatccgctccccagcttgcgatctgcttcgcatgctctggagttgatat 337 |||||| || ||||| | || ||||||||| ||||||||||||| ||||| Sbjct: 2575 accatctgcgccccatcccgcaatctgcttcacatgctctggagtcgatat 2525
>gb|AY254104.1| Zea mays clone ASJ-Bx1.2 indole synthase mRNA, complete cds Length = 1044 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 456 acgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgtggttggtgtt 515 ||||| ||||||||||| || ||||| ||||||||||| ||| |||| ||| ||||||| Sbjct: 764 acgaagccttctgaagccttggtgatctccttcatcctgtcttctggtatggctggtgtt 705 Query: 516 gtaagtagcaccagctc 532 || || ||||||||||| Sbjct: 704 gtcagcagcaccagctc 688
>gb|AY254103.1| Zea mays clone ASJ-Bx1.1 indole synthase mRNA, complete cds Length = 1044 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 456 acgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgtggttggtgtt 515 ||||| ||||||||||| || ||||| ||||||||||| ||| |||| ||| ||||||| Sbjct: 764 acgaagccttctgaagccttggtgatctccttcatcctgtcttctggtatggctggtgtt 705 Query: 516 gtaagtagcaccagctc 532 || || ||||||||||| Sbjct: 704 gtcagcagcaccagctc 688
>gb|AY104439.1| Zea mays PCO064449 mRNA sequence Length = 1504 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 456 acgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgtggttggtgtt 515 ||||| ||||||||||| || ||||| ||||||||||| ||| |||| ||| ||||||| Sbjct: 819 acgaagccttctgaagccttggtgatctccttcatcctgtcttctggtatggctggtgtt 760 Query: 516 gtaagtagcaccagctc 532 || || ||||||||||| Sbjct: 759 gtcagcagcaccagctc 743 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 309 atctgcttcgcatgctctggagttgatatgccaaagccaacagc 352 ||||||||| | |||||||| | |||||||| ||||||||||| Sbjct: 966 atctgcttcacgtgctctggcttggatatgccgaagccaacagc 923
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 311 ctgcttcgcatgctctggagttgatatgccaaagccaacagccacaggtttgtc 364 ||||||| ||||||||||||| ||||| || || ||||||||||||| |||||| Sbjct: 184126 ctgcttcacatgctctggagtcgatataccgaacccaacagccacagctttgtc 184179 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Plus Query: 227 tccttcttcaggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcac 286 ||||||||| || ||||| ||||||||||| || || || || || || ||||| ||||| Sbjct: 183948 tccttcttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcac 184007 Query: 287 accatccgctcccca 301 |||||| || ||||| Sbjct: 184008 accatctgcgcccca 184022
>ref|NM_115321.2| Arabidopsis thaliana TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN); tryptophan synthase AT3G54640 (TSA1) mRNA, complete cds Length = 1331 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctctatgt 537 |||||| | ||||||||||||||||||||| || ||||| |||||||| |||| Sbjct: 850 cttcattcgctctgttggtgtggttggtgtagtgagtaggaccagctcaatgt 798 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Minus Query: 267 attgcactgccaataatcacaccatccgctccccagcttgcgatctgcttcgcatgctct 326 ||||||||||| | ||||| ||||| |||||||| | || ||||| ||| ||||||| Sbjct: 1068 attgcactgcctacgatcactccatcagctccccatccagctatctgtttcacatgctcc 1009 Query: 327 ggagttgatatgccaaagccaacagccacaggtttgtctgt 367 || ||||||| ||||| || || ||||| || |||||||| Sbjct: 1008 ggctttgatattccaaaaccgactgccaccggcttgtctgt 968
>gb|AY316528.1| Brassica oleracea var. capitata putative tryptophan synthase alpha chain mRNA, partial cds Length = 800 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 267 attgcactgccaataatcacaccatccgctccccagcttgcgatctgcttcgcatgctct 326 ||||||||||| | |||||| ||||| |||||||| | || ||||| ||| ||||||| Sbjct: 590 attgcactgcctacaatcactccatcagctccccatccagctatctgtttcacatgctca 531 Query: 327 ggagttgatatgccaaagccaacagccacaggtttgtctgt 367 || ||||||| ||||| || |||||||| || |||||||| Sbjct: 530 ggctttgatattccaaaaccgacagccactggcttgtctgt 490 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtagcaccag 529 |||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 372 cttcattctctctgttggtgttgttggtgtagtgagtaggaccag 328
>gb|BT009176.1| Triticum aestivum clone wl1n.pk0109.d5:fis, full insert mRNA sequence Length = 1041 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 456 acgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgtggttggtgtt 515 ||||| ||||||||||| || ||||| ||||||||||| || |||| ||| ||||||| Sbjct: 350 acgaagccttctgaagccttggtgatctccttcatcctgtcctctggtatggctggtgtt 291 Query: 516 gtaagtagcaccagctc 532 || || ||||||||||| Sbjct: 290 gtcagcagcaccagctc 274 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 309 atctgcttcgcatgctctggagttgatatgccaaagccaacagc 352 ||||||||| | |||||||| | |||||||| ||||||||||| Sbjct: 497 atctgcttcacgtgctctggcttggatatgccgaagccaacagc 454
>emb|BX825792.1|CNS0A6HC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1101 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctctatgt 537 |||||| | ||||||||||||||||||||| || ||||| |||||||| |||| Sbjct: 650 cttcattcgctctgttggtgtggttggtgtagttagtaggaccagctcaatgt 598
>gb|AY087980.1| Arabidopsis thaliana clone 40110 mRNA, complete sequence Length = 1258 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctctatgt 537 |||||| | ||||||||||||||||||||| || ||||| |||||||| |||| Sbjct: 849 cttcattcgctctgttggtgtggttggtgtagtgagtaggaccagctcaatgt 797 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Minus Query: 267 attgcactgccaataatcacaccatccgctccccagcttgcgatctgcttcgcatgctct 326 ||||||||||| | ||||| ||||| |||||||| | || ||||| ||| ||||||| Sbjct: 1067 attgcactgcctacgatcactccatcagctccccatccagctatctgtttcacatgctcc 1008 Query: 327 ggagttgatatgccaaagccaacagccacaggtttgtctgt 367 || ||||||| ||||| || || ||||| || |||||||| Sbjct: 1007 ggctttgatattccaaaaccgactgccaccggcttgtctgt 967
>emb|X76713.1|ZMTRPA Z.mays (C6000237) trpA gene Length = 4796 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 456 acgaatccttctgaagcttttgtgatttccttcatcctctctgttggtgtggttggtgtt 515 ||||| ||||||||||| || ||||| ||||||||||| ||| |||| ||| ||||||| Sbjct: 2864 acgaagccttctgaagccttggtgatctccttcatcctgtcttctggtatggctggtgtt 2805 Query: 516 gtaagtagcacc 527 || || |||||| Sbjct: 2804 gtcagcagcacc 2793
>emb|AJ841704.1| Isatis tinctoria mRNA for tryptophan synthase, alpha subunit (TSA1) (tsa gene) Length = 1128 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtagcaccagctctatgtt 538 |||||| | ||||||||||||||||||||| || ||||| ||||| || ||||| Sbjct: 678 cttcattcgctctgttggtgtggttggtgtagtgagtaggaccagttcaatgtt 625 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Minus Query: 267 attgcactgccaataatcacaccatccgctccccagcttgcgatctgcttcgcatgctct 326 ||||||||||| | |||||| ||||| |||||||| | || ||||| ||| ||||||| Sbjct: 896 attgcactgcctacaatcactccatcagctccccaaccagctatctgtttcacatgctca 837 Query: 327 ggagttgatatgccaaagccaacagccacaggtttgtctgt 367 || |||||| ||||| || || ||||| || |||||||| Sbjct: 836 ggctgtgatattccaaaaccgaccgccactggcttgtctgt 796
>gb|AF271383.1|AF271383 Zea mays indole-3-glycerol phosphate lyase (Igl) gene, complete cds; and putative tryptophan synthase alpha (TSAlike) gene, partial cds Length = 6644 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 237 ggagaagcggcttcgcccaactgtctaacgattgcactgccaataatcacaccatccgct 296 ||||| || |||||||| |||||||| || ||||| || ||||| ||||||||||| || Sbjct: 1792 ggagaggctgcttcgcctaactgtctcaccattgcgctaccaatgatcacaccatctgca 1733 Query: 297 cccca 301 ||||| Sbjct: 1732 cccca 1728
>dbj|AP006680.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375a, complete sequence Length = 58157 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 270 gcactgccaataatcacaccatccgctcccca 301 |||||||||| |||||||||||| |||||||| Sbjct: 49538 gcactgccaacaatcacaccatcagctcccca 49507
>emb|AL138656.2|ATT14E10 Arabidopsis thaliana DNA chromosome 3, BAC clone T14E10 Length = 94911 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtag 523 |||||| | ||||||||||||||||||||| || ||||| Sbjct: 92634 cttcattcgctctgttggtgtggttggtgtagtgagtag 92672
>emb|AJ841705.1| Isatis tinctoria tsa gene for tryptophan synthase, alpha subunit (TSA1), exons 1-8 Length = 2132 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtag 523 |||||| | ||||||||||||||||||||| || ||||| Sbjct: 1488 cttcattcgctctgttggtgtggttggtgtagtgagtag 1450
>emb|BX825994.1|CNS0A6C0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtag 523 |||||| | ||||||||||||||||||||| || ||||| Sbjct: 282 cttcattcgctctgttggtgtggttggtgtagtgagtag 244
>gb|U18993.1|ATU18993 Arabidopsis thaliana tryptophan synthase alpha chain (TSA1) gene, complete cds Length = 5035 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 485 cttcatcctctctgttggtgtggttggtgttgtaagtag 523 |||||| | ||||||||||||||||||||| || ||||| Sbjct: 3145 cttcattcgctctgttggtgtggttggtgtagtgagtag 3107
>gb|M98815.1|MOCREPSEQB Molluscum contagiosum virus DNA Length = 4107 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 441 gcactcacaagataaacgaatccttct 467 ||||||||| ||||||||||||||||| Sbjct: 3648 gcactcacacgataaacgaatccttct 3674
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 aattcatattgtgattctaaca 32 |||||||||||||||||||||| Sbjct: 6902 aattcatattgtgattctaaca 6923
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 aattcatattgtgattctaaca 32 |||||||||||||||||||||| Sbjct: 56134 aattcatattgtgattctaaca 56155
>emb|CR382279.1| M.truncatula DNA sequence from clone MTH2-15G18 on chromosome 3, complete sequence Length = 140041 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 tgattctaacacacaaatatataatt 47 |||||||||||||||||| ||||||| Sbjct: 67019 tgattctaacacacaaatttataatt 66994
>gb|AC145219.16| Medicago truncatula clone mth2-6m1, complete sequence Length = 140462 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 tgattctaacacacaaatatataatt 47 |||||||||||||||||| ||||||| Sbjct: 130762 tgattctaacacacaaatttataatt 130737
>gb|DQ366742.1| Uncultured Prochlorococcus marinus clone HOT0M-8E2 genomic sequence Length = 30260 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 319 catgctctggagttgatatgccaaagccaacagc 352 |||| |||||||||||||| ||||| |||||||| Sbjct: 21095 catgttctggagttgatattccaaaaccaacagc 21062
>gb|AY059631.1| Medicago truncatula phosphoinositide-specific phospholipase C (PLC1) gene, complete cds Length = 6443 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 tgattctaacacacaaatatataatt 47 |||||||||||||||||| ||||||| Sbjct: 2097 tgattctaacacacaaatttataatt 2072
>gb|AC149131.3| Medicago truncatula chromosome 7 BAC clone mth2-19e15, complete sequence Length = 122492 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 tgattctaacacacaaatatataatt 47 |||||||||||||||||| ||||||| Sbjct: 36690 tgattctaacacacaaatttataatt 36665
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 aattcatattgtgattctaaca 32 |||||||||||||||||||||| Sbjct: 17062767 aattcatattgtgattctaaca 17062788
>gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189477 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 338 gccaaagccaacagccacaggtttg 362 |||||| |||||||||||||||||| Sbjct: 53940 gccaaacccaacagccacaggtttg 53964
>emb|AL139276.17| Human DNA sequence from clone RP11-30M20 on chromosome Xq11.2-13.1 Contains a novel pseudogene and a eukaryotic translation initiation factor 4B (EIF4B) pseudogene, complete sequence Length = 83401 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 acacaaatatataattgtttt 52 ||||||||||||||||||||| Sbjct: 6670 acacaaatatataattgtttt 6650
>emb|AL136133.14| Human DNA sequence from clone CTA-253N17 on chromosome 1 Contains the 5' end of the C1orf25 gene for chromosome 1 open reading frame 25, the 5' end of the C1orf26 gene for chromosome 1 open reading frame 26 and a CpG island, complete sequence Length = 85565 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 ttcttctcagtccttcttcag 237 ||||||||||||||||||||| Sbjct: 79239 ttcttctcagtccttcttcag 79259
>gb|AC160397.9| Mus musculus 6 BAC RP23-279I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 173003 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 gccaaagccaacagccacaggtttg 362 |||||| |||||||||||||||||| Sbjct: 25725 gccaaacccaacagccacaggtttg 25701
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 ttctgaagcttttgtgatttc 484 ||||||||||||||||||||| Sbjct: 45153 ttctgaagcttttgtgatttc 45173
>ref|XM_635127.1| Dictyostelium discoideum hypothetical protein (DDB0214900), partial mRNA Length = 8037 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 498 gttggtgtggttggtgttgtaagt 521 ||||||||||||||||||| |||| Sbjct: 6833 gttggtgtggttggtgttgaaagt 6810
>gb|DQ213694.1| Taeniopygia guttata clone 0058P0058F04 phosphopantothenate-cysteine ligase-like mRNA, complete sequence Length = 1287 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 ctgaagcttttgtgatttccttca 489 ||||||| |||||||||||||||| Sbjct: 694 ctgaagcctttgtgatttccttca 717
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 atctgcttcgcatgctctgg 328 |||||||||||||||||||| Sbjct: 51072 atctgcttcgcatgctctgg 51053
>ref|XM_451861.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B07469g predicted mRNA Length = 2637 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cttttgtgatttccttcatc 491 |||||||||||||||||||| Sbjct: 835 cttttgtgatttccttcatc 816
>emb|CR751605.10| Zebrafish DNA sequence from clone DKEY-25J15 in linkage group 14, complete sequence Length = 145610 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 caaatatataattgttttga 54 |||||||||||||||||||| Sbjct: 26947 caaatatataattgttttga 26928
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ttctaacacacaaatatata 44 |||||||||||||||||||| Sbjct: 210200 ttctaacacacaaatatata 210219
>emb|Z69787.1|CEC44C10 Caenorhabditis elegans Cosmid C44C10, complete sequence Length = 35409 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 aattacagattccaggtccaccga 104 ||||||||||||| |||||||||| Sbjct: 24191 aattacagattcccggtccaccga 24168
>gb|AC117258.2| Mus musculus BAC clone RP24-491P21 from X, complete sequence Length = 161458 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 ccttctgaagcttttgtgatttcc 485 |||||||||||| ||||||||||| Sbjct: 72900 ccttctgaagctgttgtgatttcc 72923
>gb|AF068714.1| Caenorhabditis elegans cosmid B0348, complete sequence Length = 45125 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 attctaacacacaaatatataatt 47 |||||||||| ||||||||||||| Sbjct: 38676 attctaacactcaaatatataatt 38653
>gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete sequence Length = 140197 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ccttgttaattcatattgtg 23 |||||||||||||||||||| Sbjct: 135225 ccttgttaattcatattgtg 135206
>emb|AL513016.5| Human DNA sequence from clone RP11-474O21 on chromosome 1 Contains the 5' end of the gene for short-chain dehydrogenase/reductase 1 (SDR1), two genes for novel proteins similar to esterases, a ribosomal protein L23a (RPL23A) pseudogene, the gene for a novel protein (MGC35194) and a CpG island, complete sequence Length = 150720 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 tcctctctgttggtgtggtt 509 |||||||||||||||||||| Sbjct: 78048 tcctctctgttggtgtggtt 78067
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cttttgtgatttccttcatc 491 |||||||||||||||||||| Sbjct: 647448 cttttgtgatttccttcatc 647467
>emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chromosome 9; segment 4/5 Length = 254050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tctaacacacaaatatataa 45 |||||||||||||||||||| Sbjct: 35640 tctaacacacaaatatataa 35621
>emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chromosome 1, complete sequence Length = 225410 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 tcctctctgttggtgtggtt 509 |||||||||||||||||||| Sbjct: 78081 tcctctctgttggtgtggtt 78100
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 tggcttgttcatgatggaactgcc 171 ||||||||||||||||| |||||| Sbjct: 327949 tggcttgttcatgatggcactgcc 327926
>gb|AC009987.17| Homo sapiens chromosome 10 clone RP11-391M7, complete sequence Length = 196808 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tccttcttcaggagaagcgg 246 |||||||||||||||||||| Sbjct: 101608 tccttcttcaggagaagcgg 101627
>gb|AC108515.3| Homo sapiens BAC clone RP11-431J17 from 4, complete sequence Length = 90286 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tactcttctattcttctcag 226 |||||||||||||||||||| Sbjct: 18837 tactcttctattcttctcag 18818
>gb|AC153359.4| Mus musculus BAC clone RP23-477I1 from chromosome 9, complete sequence Length = 195269 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ttctaacacacaaatatata 44 |||||||||||||||||||| Sbjct: 122709 ttctaacacacaaatatata 122690
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 atctgcttcgcatgctctgg 328 |||||||||||||||||||| Sbjct: 2398975 atctgcttcgcatgctctgg 2398956
>gb|AC009302.2| Homo sapiens BAC clone RP11-71J24 from 2, complete sequence Length = 180970 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 acacacaaatatataattgt 49 |||||||||||||||||||| Sbjct: 152843 acacacaaatatataattgt 152862
>dbj|AK102457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094B15, full insert sequence Length = 1773 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 atctgcttcgcatgctctgg 328 |||||||||||||||||||| Sbjct: 467 atctgcttcgcatgctctgg 486
>gb|AY376576.1| Colletotrichum coccodes strain STE-U 5301 beta-tubulin-2 (tub2) gene, exons 2 through 6 and partial cds Length = 694 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ttgatctcctgaagaagatg 394 |||||||||||||||||||| Sbjct: 286 ttgatctcctgaagaagatg 305
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 atctgcttcgcatgctctgg 328 |||||||||||||||||||| Sbjct: 2406711 atctgcttcgcatgctctgg 2406692
>dbj|AB030033.1| Dictyostelium discoideum gene for AmiB, complete cds Length = 9211 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 498 gttggtgtggttggtgttgtaagt 521 ||||||||||||||||||| |||| Sbjct: 7385 gttggtgtggttggtgttgaaagt 7362 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,427,920 Number of Sequences: 3902068 Number of extensions: 5427920 Number of successful extensions: 107163 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106765 Number of HSP's gapped (non-prelim): 390 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
