Clone Name | rbasd24m12 |
---|---|
Clone Library Name | barley_pub |
>CALX_SOYBN (Q39817) Calnexin homolog precursor| Length = 546 Score = 88.6 bits (218), Expect = 9e-18 Identities = 41/61 (67%), Positives = 49/61 (80%) Frame = -3 Query: 498 FQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFG 319 FQKK+F +LYKIADIPFL +K KI DLIEK EKQPN+TI IL +V V+ V++ FR IFG Sbjct: 437 FQKKVFDLLYKIADIPFLSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFFRLIFG 496 Query: 318 G 316 G Sbjct: 497 G 497
>CALX_PEA (O82709) Calnexin homolog precursor| Length = 551 Score = 81.3 bits (199), Expect = 1e-15 Identities = 38/60 (63%), Positives = 47/60 (78%) Frame = -3 Query: 495 QKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 316 QKK F +LYKIADI FL K KII++IEKGEKQPN+TI I+ SV ++ V++ FR IFGG Sbjct: 443 QKKAFDLLYKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGG 502
>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor| Length = 532 Score = 80.1 bits (196), Expect = 3e-15 Identities = 36/82 (43%), Positives = 52/82 (63%) Frame = -3 Query: 498 FQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFG 319 +QKK+F +LYK+ADI FL YK KI++LIEK E QPN+TI +L S+ ++ +++ F+ IFG Sbjct: 430 YQKKVFDLLYKVADISFLSAYKSKIMELIEKAETQPNLTIGVLISIVIVFLSLFFKLIFG 489 Query: 318 GXXXXXXXXXXXXXXXPSATEA 253 G S +EA Sbjct: 490 GAKAKVEKKKPETAAETSTSEA 511
>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 78.2 bits (191), Expect = 1e-14 Identities = 32/60 (53%), Positives = 48/60 (80%) Frame = -3 Query: 495 QKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 316 QK +F VLYKIAD+PFL +K+K+++LIEK E QPNITI ++ S+ V++ ++L + +FGG Sbjct: 432 QKAVFDVLYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILLKLLFGG 491
>CALX1_ARATH (P29402) Calnexin homolog 1 precursor| Length = 530 Score = 68.6 bits (166), Expect = 9e-12 Identities = 29/61 (47%), Positives = 44/61 (72%) Frame = -3 Query: 498 FQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFG 319 +QK +F +L K+AD+ FL YK KI +LIEK E+QPN+TI +L ++ V+ ++ + IFG Sbjct: 428 YQKVVFDLLNKVADLSFLSAYKSKITELIEKAEQQPNLTIGVLVAIVVVFFSLFLKLIFG 487 Query: 318 G 316 G Sbjct: 488 G 488
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.6 bits (70), Expect = 1.3 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -2 Query: 373 FGLSCCHPCYCALQNHFRWQEGSGTCEA----RCCGEEAQCHGSRC 248 +G C CYC+ + Q G+ C A R C + C+ S C Sbjct: 177 WGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPC 222
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 30.8 bits (68), Expect = 2.2 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 Query: 364 SCCHPCYCALQNHFRWQEGSGTCEARCC 281 SCC PCYC+ GS C++ CC Sbjct: 89 SCCKPCYCSSGC------GSSCCQSSCC 110
>ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1)| Length = 545 Score = 30.4 bits (67), Expect = 2.8 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = -2 Query: 349 CYCALQNHFRWQEGSGTCEARCCGEEAQCHGS 254 CY + ++H R G C+ + CG+ C+ S Sbjct: 307 CYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSS 338
>FA35A_MOUSE (Q3UEN2) Protein FAM35A| Length = 898 Score = 28.9 bits (63), Expect = 8.2 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = -3 Query: 465 IADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIF 322 + D+P +P K+ ++ +E + QP+I + A + V+ VTVL ++ Sbjct: 542 LKDLPQRQPQKMNTVEFVELEQLQPDILVH--AVLRVVDVTVLTEALY 587
>LAMB1_HUMAN (P07942) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1786 Score = 28.9 bits (63), Expect = 8.2 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = -2 Query: 379 FDFGLSCCHPCYCALQNHFRWQEGSGTCEARCCGEEAQCH 260 F FG S C PC C LQ G+ A C QCH Sbjct: 811 FGFGPSGCKPCECHLQ---------GSVNAFCNPVTGQCH 841
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 28.9 bits (63), Expect = 8.2 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -2 Query: 364 SCCHPCYCALQNHFRWQEGSGTCEARCCGEEAQCHGSRC 248 SCC PC C+ GS C++ CC + C S C Sbjct: 117 SCCKPCCCSSGC------GSSCCQSSCC-KPCCCQSSCC 148 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,049,760 Number of Sequences: 219361 Number of extensions: 934868 Number of successful extensions: 2963 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2825 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2958 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)