ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2... 65 2e-10
2FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2... 65 2e-10
3FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.... 64 4e-10
4FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-) 64 5e-10
5FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2... 63 7e-10
6FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.... 63 9e-10
7FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-) 62 1e-09
8FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2... 60 7e-09
9FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor... 60 7e-09
10FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2... 59 1e-08
11FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-) 59 1e-08
12FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-) 59 1e-08
13FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-) 59 1e-08
14FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-) 59 1e-08
15FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-) 59 1e-08
16FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-) 59 1e-08
17FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.... 59 1e-08
18FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2... 59 1e-08
19FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.... 59 1e-08
20FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl... 59 1e-08
21FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl... 59 2e-08
22FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2... 58 2e-08
23FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2... 58 2e-08
24FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2... 58 2e-08
25FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2... 58 3e-08
26FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl... 58 3e-08
27FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2... 57 4e-08
28FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2... 57 4e-08
29FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2... 57 5e-08
30RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as... 56 8e-08
31FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2... 56 1e-07
32FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor... 55 1e-07
33SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia... 55 2e-07
34FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2... 55 2e-07
35FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2... 54 4e-07
36FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2... 54 5e-07
37AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg... 54 5e-07
38AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-) 54 5e-07
39FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2... 53 7e-07
40FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2... 53 7e-07
41FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.... 52 2e-06
42FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.... 52 2e-06
43FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2... 52 2e-06
44AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as... 52 2e-06
45PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso... 52 2e-06
46PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso... 51 3e-06
47Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156 50 6e-06
48AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-) 49 1e-05
49FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2... 49 2e-05
50PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso... 48 2e-05
51PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso... 48 3e-05
52PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso... 48 3e-05
53TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T... 47 5e-05
54Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297 47 5e-05
55PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4 47 6e-05
56PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso... 46 8e-05
57PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso... 46 1e-04
58TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER... 46 1e-04
59TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER... 46 1e-04
60TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T... 46 1e-04
61TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T... 46 1e-04
62PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso... 45 2e-04
63FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2... 45 2e-04
64SAV_SULAC (Q07590) SAV protein 44 3e-04
65VAT_THEAC (O05209) VCP-like ATPase 44 4e-04
66PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog 44 5e-04
67PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote... 44 5e-04
68PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote... 44 5e-04
69PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote... 44 5e-04
70FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2... 43 7e-04
71TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h... 43 0.001
72CD48A_ARATH (P54609) Cell division control protein 48 homolog A ... 42 0.001
73CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ... 42 0.001
74PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso... 42 0.002
75YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo... 42 0.002
76TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h... 42 0.002
77PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso... 42 0.002
78CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val... 41 0.003
79YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-) 41 0.003
80PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote... 40 0.005
81PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote... 40 0.005
82PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote... 40 0.005
83YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.... 40 0.005
84PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote... 40 0.005
85YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.... 40 0.005
86YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.... 40 0.005
87CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h... 40 0.006
88CDCH_HALSA (Q9HPF0) Protein cdcH 40 0.006
89CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog 40 0.006
90PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso... 40 0.008
91CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48 40 0.008
92CDC48_YEAST (P25694) Cell division control protein 48 40 0.008
93FTSH_POPEU (P84578) Cell division protein ftsH homolog, chloropl... 39 0.018
94PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T... 38 0.023
95PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso... 37 0.039
96MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4) 37 0.039
97PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote... 37 0.067
98NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl... 36 0.11
99PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso... 35 0.15
100NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl... 35 0.20
101PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P... 35 0.20
102CHI1_HORVU (P11955) 26 kDa endochitinase 1 precursor (EC 3.2.1.14) 35 0.20
103PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub... 34 0.33
104CHIA_SECCE (Q9FRV1) Basic endochitinase A precursor (EC 3.2.1.14... 33 0.97
105PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo... 32 2.2
106PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro... 32 2.2
107PRS8_DROME (O18413) 26S protease regulatory subunit 8 32 2.2
108PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ... 32 2.2
109PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ... 32 2.2
110PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom... 32 2.2
111PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom... 32 2.2
112PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom... 32 2.2
113LONH_PYRAB (Q9UYC6) Putative protease La homolog (EC 3.4.21.-) [... 31 2.8
114TBP7_YEAST (P40340) TAT-binding homolog 7 31 3.7
115SPG16_HUMAN (Q8N0X2) Sperm-associated antigen 16 protein (PF20 p... 27 3.7
116LONH_PYRHO (O58221) Putative protease La homolog (EC 3.4.21.-) [... 30 4.8
117SYK_ORYSA (Q6F2U9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 30 6.3
118CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ... 30 6.3
119PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P... 30 6.3
120PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T... 30 8.2
121ACHA7_BOVIN (P54131) Neuronal acetylcholine receptor protein, al... 30 8.2 
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 37/77 (48%), Positives = 48/77 (62%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL VH +  PL ED ++   LVA  TPG VGADL N++NEAAL+AARR   I+   D
Sbjct: 362 REAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASD 419

Query: 473 IMDAIEREKYGVNGRQK 423
           I +A +R   G + + K
Sbjct: 420 IDEAEDRVIAGPSKKDK 436
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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 37/77 (48%), Positives = 48/77 (62%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL VH +  PL ED ++   LVA  TPG VGADL N++NEAAL+AARR   I+   D
Sbjct: 362 REAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASD 419

Query: 473 IMDAIEREKYGVNGRQK 423
           I +A +R   G + + K
Sbjct: 420 IDEAEDRVIAGPSKKDK 436
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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R KIL ++ +K+ L+++ E+    +A  TPG  GADLAN+VNEAALLAAR   D V   D
Sbjct: 351 RLKILEIYAKKIKLDKEVEL--KNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEAD 408

Query: 473 IMDAIEREKYGVNGRQK 423
             +AIER   G+  + +
Sbjct: 409 FREAIERVVAGLEKKSR 425
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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV---- 486
           R++IL VH+RKVPL ED + +  ++A  TPG  GADLAN+VNEAAL AAR    +V    
Sbjct: 327 RKQILKVHMRKVPLSEDVDPM--IIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIH 384

Query: 485 ---AREDIMDAIEREKYGVNGRQK 423
              A++ IM   ER    ++  QK
Sbjct: 385 FEKAKDKIMMGSERRSMVMSDFQK 408
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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 63.2 bits (152), Expect = 7e-10
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH R   L +D ++  + VA  TPG  GADL N++NEAALLAAR+G + +  E+
Sbjct: 331 RYEILKVHARNKKLAKDVDL--EFVARATPGFTGADLENLLNEAALLAARKGKEEITMEE 388

Query: 473 IMDAIEREKYGV 438
           I +A++R   G+
Sbjct: 389 IEEALDRITMGL 400
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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 35/86 (40%), Positives = 53/86 (61%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           RR+IL VH R   L +D ++  D +A  TPG  GADL+N++NEAA+LAARR    ++ ++
Sbjct: 336 RREILNVHARGKTLSQDVDL--DKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDE 393

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGL 396
           + DAI+R   G   + +     R+ L
Sbjct: 394 VNDAIDRVLAGPEKKNRVMSEKRKTL 419
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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R KI+ VH++KVPL  + + +  ++A  TPG  GADLAN+VNEAAL AAR   D+V   D
Sbjct: 327 REKIIQVHMKKVPLGNNVDPM--IIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSD 384

Query: 473 IMDAIEREKYGVNGR 429
              A ++   G   R
Sbjct: 385 FESAKDKITMGSERR 399
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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 35/87 (40%), Positives = 52/87 (59%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VHL+K+  + +S ++  ++A  TPG  GA+LAN+VNEAAL+AAR G   V   D
Sbjct: 330 REQILKVHLKKI--KYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHD 387

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGLT 393
           + +A ++   GV  R        + LT
Sbjct: 388 MEEAKDKVLMGVARRSIAMSEKEKRLT 414
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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R KIL VH R   L +D +   D VA  TPG  GADL N++NEAA+LAARR    +++++
Sbjct: 437 RVKILQVHSRGKALGKDVDF--DKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDE 494

Query: 473 IMDAIER 453
           I DA+ER
Sbjct: 495 ISDALER 501
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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 35/87 (40%), Positives = 52/87 (59%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VHL+K+  + +S ++  ++A  TPG  GA+LAN+VNEAAL+AAR G   V   D
Sbjct: 330 REQILKVHLKKI--KYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHD 387

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGLT 393
           + +A ++   GV  R        + LT
Sbjct: 388 MEEAKDKVLMGVVRRSIAMSEKEKRLT 414
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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV---- 486
           R +IL VH+R+VPL  D  I   ++A  TPG  GADLAN+VNEAAL AAR    +V    
Sbjct: 327 REQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVE 384

Query: 485 ---AREDIMDAIEREKYGVNGRQK 423
              A++ IM   ER    +   QK
Sbjct: 385 FEKAKDKIMMGAERRSMVMTEAQK 408
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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV---- 486
           R +IL VH+R+VPL  D  I   ++A  TPG  GADLAN+VNEAAL AAR    +V    
Sbjct: 327 REQILKVHMRRVPLATD--IDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVE 384

Query: 485 ---AREDIMDAIEREKYGVNGRQK 423
              A++ IM   ER    +   QK
Sbjct: 385 FEKAKDKIMMGAERRSMVMTEAQK 408
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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV---- 486
           R +IL VH+R+VPL  D  I   ++A  TPG  GADLAN+VNEAAL AAR    +V    
Sbjct: 327 REQILKVHMRRVPLATD--IDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVE 384

Query: 485 ---AREDIMDAIEREKYGVNGRQK 423
              A++ IM   ER    +   QK
Sbjct: 385 FEKAKDKIMMGAERRSMVMTEAQK 408
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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV---- 486
           R +IL VH+R+VPL  D  I   ++A  TPG  GADLAN+VNEAAL AAR    +V    
Sbjct: 327 REQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVE 384

Query: 485 ---AREDIMDAIEREKYGVNGRQK 423
              A++ IM   ER    +   QK
Sbjct: 385 FEKAKDKIMMGAERRSMVMTEAQK 408
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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV---- 486
           R +IL VH+R+VPL  D  I   ++A  TPG  GADLAN+VNEAAL AAR    +V    
Sbjct: 327 REQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVE 384

Query: 485 ---AREDIMDAIEREKYGVNGRQK 423
              A++ IM   ER    +   QK
Sbjct: 385 FEKAKDKIMMGAERRSMVMTEAQK 408
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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV---- 486
           R +IL VH+RKVPL +D + +  ++A  TPG  GADLAN+VNEAAL AAR    +V    
Sbjct: 327 REQILKVHMRKVPLSKDVDPM--IIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLE 384

Query: 485 ---AREDIMDAIEREKYGVNGRQK 423
              A++ +M   ER    ++  QK
Sbjct: 385 FERAKDKMMMGSERRSMVMSDFQK 408
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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 45/74 (60%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  ILA+H +   L E+ ++    +A  TPG  GADLAN++NEAA+  ARR  + +   +
Sbjct: 386 RELILAIHAQNKKLHEEVQLAA--IARRTPGFTGADLANVLNEAAIFTARRRKEAITMAE 443

Query: 473 IMDAIEREKYGVNG 432
           + DAI+R   G+ G
Sbjct: 444 VNDAIDRVVAGMEG 457
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>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH++ V L  D ++    +A +T GL GADLANI+NEAALLA R     V ++ 
Sbjct: 353 RVEILKVHIKPVKLANDVDL--QEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQH 410

Query: 473 IMDAIEREKYGVNGRQK 423
           + +A+ER   G+ G +K
Sbjct: 411 LKEAVER---GIAGLEK 424
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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R++IL VH R   L    E+  D +A  TPG  GADLAN++NEAA+L ARR    +   +
Sbjct: 347 RKEILEVHARNKKLAP--EVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLE 404

Query: 473 IMDAIEREKYGVNG 432
           I DA++R   G+ G
Sbjct: 405 IDDAVDRVVAGMEG 418
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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 32/67 (47%), Positives = 45/67 (67%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH R   L +D +   D +A  TPG  GADL N++NEAA+LAARR    +++++
Sbjct: 405 RVRILQVHSRGKALAKDVDF--DKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 462

Query: 473 IMDAIER 453
           I DA+ER
Sbjct: 463 ISDALER 469
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>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 32/67 (47%), Positives = 44/67 (65%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R KIL VH R   L +D +   D +A  TPG  G DL N++NEAA+LAARR    +++++
Sbjct: 428 RVKILQVHSRGKALAKDVDF--DKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDE 485

Query: 473 IMDAIER 453
           I DA+ER
Sbjct: 486 IADALER 492
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>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 35/77 (45%), Positives = 48/77 (62%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH++ V L  D  +    VA +T GL GADLANI+NEAALLA R     V ++ 
Sbjct: 347 RVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQH 404

Query: 473 IMDAIEREKYGVNGRQK 423
           + +A+ER   G+ G +K
Sbjct: 405 LKEAVER---GIAGLEK 418
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>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 35/77 (45%), Positives = 48/77 (62%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH++ V L  D  +    VA +T GL GADLANI+NEAALLA R     V ++ 
Sbjct: 347 RVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQH 404

Query: 473 IMDAIEREKYGVNGRQK 423
           + +A+ER   G+ G +K
Sbjct: 405 LKEAVER---GIAGLEK 418
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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 30/74 (40%), Positives = 48/74 (64%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL VH +K  + +D  ++ +++A  TPG  GADLAN++NEAA+L  RRG   +  ++
Sbjct: 346 RLAILKVHSKKKKIHKD--VLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKE 403

Query: 473 IMDAIEREKYGVNG 432
           I D+I++   G+ G
Sbjct: 404 IEDSIDKIIAGLEG 417
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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 29/67 (43%), Positives = 45/67 (67%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           RR +L VH +  P+ +D+++  D +A  T G+ GADLAN+VNEAALL AR  G ++    
Sbjct: 338 RRAVLRVHSKGKPIADDADL--DGLAKRTVGMTGADLANVVNEAALLTARENGLVITGPA 395

Query: 473 IMDAIER 453
           + +A++R
Sbjct: 396 LEEAVDR 402
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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 32/67 (47%), Positives = 45/67 (67%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R KIL VH R   L +D +   + +A  TPG  GADL N++NEAA+LAARR    +++++
Sbjct: 428 RIKILQVHSRGKALTKDVDF--EKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDE 485

Query: 473 IMDAIER 453
           I DA+ER
Sbjct: 486 ISDALER 492
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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 44/67 (65%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           RR +L VH +  P+  D+++  D +A  T G+ GADLAN++NEAALL AR  G ++    
Sbjct: 338 RRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANVINEAALLTARENGTVITGPA 395

Query: 473 IMDAIER 453
           + +A++R
Sbjct: 396 LEEAVDR 402
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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 44/67 (65%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           RR +L VH +  P+  D+++  D +A  T G+ GADLAN++NEAALL AR  G ++    
Sbjct: 338 RRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANVINEAALLTARENGTVITGPA 395

Query: 473 IMDAIER 453
           + +A++R
Sbjct: 396 LEEAVDR 402
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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 31/71 (43%), Positives = 44/71 (61%)
 Frame = -3

Query: 644 ILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMD 465
           IL VH R  PL ED  ++   +AN TPG  GADLAN++NEAA+LA R     + + ++ +
Sbjct: 364 ILKVHARNKPLGEDVSLV--QLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNE 421

Query: 464 AIEREKYGVNG 432
           A +R   G+ G
Sbjct: 422 AADRIIGGIAG 432
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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R+ I AVHL  + L  +   + + +A +TPG  GAD+AN+ NEAAL+AAR   D V    
Sbjct: 524 RKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNH 583

Query: 473 IMDAIEREKYGVNGRQK 423
              AIER   GV  + K
Sbjct: 584 FEQAIERVIGGVERKSK 600
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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 31/77 (40%), Positives = 45/77 (58%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H + V L  + ++    VA +T G  GADLAN+VNEAALLA R G   V   D
Sbjct: 315 REAILRIHAQNVKLAPEVDL--KAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETD 372

Query: 473 IMDAIEREKYGVNGRQK 423
           + +A+E+   G+  + +
Sbjct: 373 LDEAVEKTMIGLQKKSR 389
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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 31/67 (46%), Positives = 45/67 (67%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH R   + +D +   + VA  TPG  GADL N++NEAA+LAARR    +++++
Sbjct: 425 RVQILKVHSRGKAIGKDVDY--EKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDE 482

Query: 473 IMDAIER 453
           I DA+ER
Sbjct: 483 ISDALER 489
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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 32/77 (41%), Positives = 42/77 (54%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           RR+I   HL+ + L + S      +A +TPG  GAD+ANI NEAAL AAR G   V   +
Sbjct: 485 RREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLN 544

Query: 473 IMDAIEREKYGVNGRQK 423
              A+ER   G   + K
Sbjct: 545 FEYAVERVLAGTAKKSK 561
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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 45/75 (60%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH R   L  D  I  +L+A  TPG  GADLAN++NEAA+L ARR    +   +
Sbjct: 348 RLEILNVHARNKKL--DLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISE 405

Query: 473 IMDAIEREKYGVNGR 429
           I  +I+R   G+ G+
Sbjct: 406 IDASIDRVIAGMEGK 420
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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 42/71 (59%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  +L VH +  PL  D ++    VA  TPG VGADL N++NEAAL+AAR+    +   D
Sbjct: 369 REAVLKVHAKNKPLASDVDL--HNVATQTPGYVGADLENVLNEAALVAARQNKKEINAAD 426

Query: 473 IMDAIEREKYG 441
           I + ++R   G
Sbjct: 427 IDEGMDRAMAG 437
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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 30/74 (40%), Positives = 44/74 (59%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL VH +   +E  S++  + +A  TPG  GADLAN++NEAA+L ARR    +   +
Sbjct: 348 RLAILEVHAKNKKME--SKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSE 405

Query: 473 IMDAIEREKYGVNG 432
           I  +I+R   G+ G
Sbjct: 406 IDTSIDRVVAGLEG 419
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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEE--DSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVAR 480
           R  I  VHLR + L+   + + +   +A++TPG  GAD+AN+ NEAAL+AAR   D + +
Sbjct: 483 RASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQ 542

Query: 479 EDIMDAIER 453
           +    AIER
Sbjct: 543 KHFEQAIER 551
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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEE--DSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVAR 480
           R  I  VHLR + L+   + + +   +A++TPG  GAD+AN+ NEAAL+AAR   D +  
Sbjct: 482 RASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINE 541

Query: 479 EDIMDAIER 453
           +    AIER
Sbjct: 542 KHFEQAIER 550
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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL VH  +  L    ++  + VA  T G  GADLAN++NEAA+LA RRG   +  ++
Sbjct: 329 RIAILKVHANQKKLHP--QVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKE 386

Query: 473 IMDAIEREKYGVNG 432
           I DAI+R   G+ G
Sbjct: 387 IDDAIDRVIAGMEG 400
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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 29/67 (43%), Positives = 41/67 (61%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R ++L VH R  PL +D  +    +A  TPG  GADL N++NEAAL+AAR     ++   
Sbjct: 341 REEVLKVHARNKPLNDDVNL--KTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIH 398

Query: 473 IMDAIER 453
           I +AI+R
Sbjct: 399 IEEAIDR 405
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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAAR 504
           R +IL VH+RKV + +D + +   +A  TPG  GADLAN+VNEAAL AAR
Sbjct: 326 REQILKVHMRKVSVAQDVDAMT--LARGTPGYSGADLANLVNEAALFAAR 373
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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAAR 504
           R +IL VH+RKV + +D + +   +A  TPG  GADLAN+VNEAAL AAR
Sbjct: 72  REQILKVHMRKVSVAQDVDAMT--LARGTPGYSGADLANLVNEAALFAAR 119
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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 29/67 (43%), Positives = 40/67 (59%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  +L VH R  PL+E   +    +A  TPG  GADL N++NEAAL+AAR+    +   D
Sbjct: 336 REAVLKVHARNKPLDETVNL--KSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARD 393

Query: 473 IMDAIER 453
           I +A +R
Sbjct: 394 IDEATDR 400
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>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLE----EDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV 486
           R++I  VHL+++ L+    +D   +   +A +TPG  GAD+AN  NEAAL+AAR     +
Sbjct: 465 RQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYI 524

Query: 485 AREDIMDAIEREKYGVNGRQK 423
                  AIER   G+  + +
Sbjct: 525 TIHHFEQAIERVIAGLEKKTR 545
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>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 27/78 (34%), Positives = 45/78 (57%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H RK  +  D ++  + +A +T G  GADL  +V EA   A RRG  ++  +D
Sbjct: 315 RLEILGIHTRKAKMAPDVDL--EAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDD 372

Query: 473 IMDAIEREKYGVNGRQKG 420
           ++ A+E+ K  ++ R  G
Sbjct: 373 MIKAVEKVKAALDKRGGG 390
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>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 28/84 (33%), Positives = 45/84 (53%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R KIL +H  K+ L ED +     +A  T G+ GADL  I  EA + A RR  ++V  E+
Sbjct: 335 RGKILKIHCEKMTLAEDIDF--KKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEE 392

Query: 473 IMDAIEREKYGVNGRQKGPDSARE 402
            ++A+E+     + ++  P +  E
Sbjct: 393 FLEAVEKVSMAADTQKMMPSNLPE 416
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>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARR 501
           R++IL +H R +PL ED ++  D +A+VT G VGADLA +  EAA+ A RR
Sbjct: 352 RKEILQIHTRNMPLAEDVDL--DYLADVTHGFVGADLAALCKEAAMRALRR 400



 Score = 33.5 bits (75), Expect = 0.57
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAAR 504
           R  I  +H R + L ED  +  + +A  T G  GAD+  +  EAA+LA R
Sbjct: 626 RLDIFKIHTRSMNLAEDVNL--EELAKKTEGYTGADIEALCREAAMLAVR 673
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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLV----ANVTPGLVGADLANIVNEAALLAARRGGDIV 486
           R  I  VHLR  PL+ D  +  D +    A +TPG  GAD++N+ NEAAL+AAR     V
Sbjct: 349 RSSIFKVHLR--PLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSV 406

Query: 485 AREDIMDAIER 453
                  AIER
Sbjct: 407 QERHFEQAIER 417
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>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/71 (39%), Positives = 41/71 (57%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H +   L +  EI  D +A  TPG  GA L N++NEA+LL+ R   D++    
Sbjct: 387 REEILKLHSKGKRLSK--EIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQ 444

Query: 473 IMDAIEREKYG 441
           I +AI+R   G
Sbjct: 445 IDEAIDRVMAG 455
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>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/67 (40%), Positives = 39/67 (58%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           RR+IL +H   + L E+ +I  +L+A +T G  GADL  I  EA + A R   D V   D
Sbjct: 327 RREILKIHTSGMALAEEVDI--ELLARITDGASGADLKAICTEAGMFAIRDERDEVTMAD 384

Query: 473 IMDAIER 453
            MDA+++
Sbjct: 385 FMDAVDK 391
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>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R++I  ++L+K  ++ D  I  D++A++T G  GA++ N+  EA  +A R G   V   D
Sbjct: 310 RKEIFRIYLQK--MKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTD 367

Query: 473 IMDAIEREKYGVNGRQKGPD 414
           ++ AIE+ K   N + K  D
Sbjct: 368 LITAIEKIK-AKNNKAKNTD 386
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>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 28/84 (33%), Positives = 44/84 (52%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R KIL +H  K+ L  D +     +A VT G+ GADL  I  EA + A R+   +V  ED
Sbjct: 335 RGKILKIHCGKMTLAGDIDF--KKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMED 392

Query: 473 IMDAIEREKYGVNGRQKGPDSARE 402
            ++A+E+     + ++  P +  E
Sbjct: 393 FLEAVEKVSMAADTQKMMPGNLPE 416
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>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 34/91 (37%), Positives = 52/91 (57%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H + + L +D ++  + VAN T G VGADLA + +EAAL A R+  D++  ED
Sbjct: 377 RLEILQIHTKNMKLSDDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGLTKLFP 381
             + I+ E   +N      D  R GL++  P
Sbjct: 435 --ETIDAEV--MNSLAVTMDDFRWGLSQSNP 461
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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARR---GGDIVA 483
           R++IL +H RK+PL ED ++  + +A +T G VGADL  +  EAA+ A RR     DI A
Sbjct: 355 RKEILEIHTRKMPLAEDVDL--EELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEA 412

Query: 482 REDIMDAIEREK 447
            E   + IE  K
Sbjct: 413 EEIPAEVIENLK 424
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>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 25/67 (37%), Positives = 37/67 (55%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +HL KV   +  EI  + +  +T G  GADL N+V EA  +A +   D V + D
Sbjct: 308 RMEILKIHLEKV--SKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSD 365

Query: 473 IMDAIER 453
           +M A  +
Sbjct: 366 LMSAARK 372
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>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 24/67 (35%), Positives = 38/67 (56%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +I  +H R + L ED ++    +A +T G  GAD+  I  EA ++A R   DIV  +D
Sbjct: 355 RYEIFKIHTRDMNLAEDVDL--QKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDD 412

Query: 473 IMDAIER 453
            + A++R
Sbjct: 413 FLKAVDR 419
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>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 25/84 (29%), Positives = 51/84 (60%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +I  ++L+K+ +E++  +  +L++ +T G  GAD+ N+  EAA +A R G + V   D
Sbjct: 310 RTEIFNIYLKKMKIEDNINL--ELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMND 367

Query: 473 IMDAIEREKYGVNGRQKGPDSARE 402
           +++AI +    +N ++   +S +E
Sbjct: 368 LVEAINK----INVKRNKMESMKE 387
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>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H + + L +D ++  + VAN T G VGADLA + +EAAL A R+  D++  ED
Sbjct: 376 RLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 433
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>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H + + L +D ++  + VAN T G VGADLA + +EAAL A R+  D++  ED
Sbjct: 376 RLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 433
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>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H + + L +D ++  + VAN T G VGADLA + +EAAL A R+  D++  ED
Sbjct: 376 RLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 433
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>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H + + L +D ++  + VAN T G VGADLA + +EAAL A R+  D++  ED
Sbjct: 376 RLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 433
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>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H RK+ L ED  +  + +A +T G VGA+L  I  EA + A R   D V  +D
Sbjct: 346 RLEILKIHTRKMNLAEDVNL--EEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDD 403

Query: 473 IMDAIER 453
              A+E+
Sbjct: 404 FRKAVEK 410
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>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 27/67 (40%), Positives = 35/67 (52%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL VH +   L     ++   VA  TPG  GA L N++NEA LLA R     +   D
Sbjct: 403 REGILQVHAKNKNLSSKISLLD--VAKRTPGFSGAQLENVINEATLLAVRDNRTTINMND 460

Query: 473 IMDAIER 453
           I +AI+R
Sbjct: 461 IDEAIDR 467
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>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 23/51 (45%), Positives = 33/51 (64%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARR 501
           R+ IL VH R +P+ +D ++  D +A +T G  GADLA +  EAA+ A RR
Sbjct: 385 RKDILQVHTRNMPITDDVDL--DKLAEMTYGYTGADLAALAKEAAIYALRR 433
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>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
 Frame = -3

Query: 653 RRKILAVHLRKVPL---EEDSEIICDLVANVTPGLVGADLANIVNEAALLAARR 501
           R++IL +H R +PL   EE+     + +A+ T G VGADLA +V E+A+ A RR
Sbjct: 363 RKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRR 416
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>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 24/82 (29%), Positives = 44/82 (53%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H + + +++D  I  +L+A + P   GA+L ++  EA + A R    +   +D
Sbjct: 355 RAHILRIHAKSMAIDKD--IRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKD 412

Query: 473 IMDAIEREKYGVNGRQKGPDSA 408
            +DA+++    V G QK   +A
Sbjct: 413 FLDAVQKV---VKGNQKFSSTA 431
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>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 23/67 (34%), Positives = 35/67 (52%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H    P+ +  EI  + +  ++ G  GADL N+  EA + A R   D V +ED
Sbjct: 309 RLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366

Query: 473 IMDAIER 453
            M A+ +
Sbjct: 367 FMKAVRK 373
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>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 23/67 (34%), Positives = 35/67 (52%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H    P+ +  EI  + +  ++ G  GADL N+  EA + A R   D V +ED
Sbjct: 309 RLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366

Query: 473 IMDAIER 453
            M A+ +
Sbjct: 367 FMKAVRK 373
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>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 23/67 (34%), Positives = 35/67 (52%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H    P+ +  EI  + +  ++ G  GADL N+  EA + A R   D V +ED
Sbjct: 309 RLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366

Query: 473 IMDAIER 453
            M A+ +
Sbjct: 367 FMKAVRK 373
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>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 27/67 (40%), Positives = 34/67 (50%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL VH     L     ++   VA  TPG  GA L N++NEA LLA R     +   D
Sbjct: 406 REGILKVHAENKNLSSKISLLD--VAKRTPGFSGAQLENVINEATLLAVRDNRTTININD 463

Query: 473 IMDAIER 453
           I +AI+R
Sbjct: 464 IDEAIDR 470
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>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
           (p97/CDC48 homolog 2)
          Length = 810

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H + + L ED ++  + VAN   G VGADLA++ +EAA+   R   +++  ED
Sbjct: 382 RLEILRIHTKNMKLGEDVDL--EQVANECHGFVGADLASLCSEAAIQQIREKMELIDLED 439

Query: 473 IMDAIERE 450
             D I+ E
Sbjct: 440 --DTIDAE 445
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>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/68 (36%), Positives = 40/68 (58%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R ++L +H + + L ED ++  + ++  T G VGADLA +  EAAL   R   D++  ED
Sbjct: 380 RLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437

Query: 473 IMDAIERE 450
             D+I+ E
Sbjct: 438 --DSIDAE 443
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>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/68 (36%), Positives = 40/68 (58%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R ++L +H + + L ED ++  + ++  T G VGADLA +  EAAL   R   D++  ED
Sbjct: 380 RLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437

Query: 473 IMDAIERE 450
             D+I+ E
Sbjct: 438 --DSIDAE 443
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>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 23/67 (34%), Positives = 37/67 (55%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH R++ L+    +   ++A +T G  GADL  I  EA + A R     V +ED
Sbjct: 316 RLEILKVHTRRMKLKN---VDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQED 372

Query: 473 IMDAIER 453
            + A+++
Sbjct: 373 FLKAVDK 379
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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV---- 486
           R  IL  H++K+ L ++ +    ++A  TPGL GA+LAN+VN+AA+ A ++    V    
Sbjct: 453 RADILKHHMKKITLADNVDPT--IIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSH 510

Query: 485 ---AREDIMDAIERE 450
              A++ I+   ER+
Sbjct: 511 FEWAKDKILMGAERK 525
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>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
           (p97/CDC48 homolog 1)
          Length = 809

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 25/68 (36%), Positives = 41/68 (60%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H + + L +D ++  + +AN   G VGADLA++ +EAAL   R   +++  ED
Sbjct: 383 RLEILRIHTKNMKLADDVDL--EQIANECHGFVGADLASLCSEAALQQIREKMELIDLED 440

Query: 473 IMDAIERE 450
             D I+ E
Sbjct: 441 --DQIDAE 446
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>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/67 (37%), Positives = 36/67 (53%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH R++ L     +   L+A +T G  GADL  I  EA + A R     V +ED
Sbjct: 313 RLEILKVHTRRMKLRG---VDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQED 369

Query: 473 IMDAIER 453
            + AI++
Sbjct: 370 FLKAIDK 376
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>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R ++L +H + + L +D ++  + +A  T G VGADLA +  EAAL   R   D++  ED
Sbjct: 381 RLEVLRIHTKNMKLSDDVDL--ERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
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>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 25/67 (37%), Positives = 39/67 (58%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  +L ++L+KV  +  S I  + +A+ T G  GAD+ N+VN+AA+ AA R    V    
Sbjct: 339 RIALLNLYLKKV--KTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHH 396

Query: 473 IMDAIER 453
           + DA +R
Sbjct: 397 LWDARDR 403
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>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +I  +H R +  E D  I  +L+A + P   GAD+ ++  EA + A R     V  +D
Sbjct: 344 RTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 401

Query: 473 IMDAIEREKYGVNGRQK 423
            +DA+ +    + G QK
Sbjct: 402 FLDAVNKV---IKGYQK 415
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>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +I  +H R +  E D  I  +L+A + P   GAD+ ++  EA + A R     V  +D
Sbjct: 344 RTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 401

Query: 473 IMDAIEREKYGVNGRQK 423
            +DA+ +    + G QK
Sbjct: 402 FLDAVNKV---IKGYQK 415
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>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +I  +H R +  E D  I  +L+A + P   GAD+ ++  EA + A R     V  +D
Sbjct: 344 RTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 401

Query: 473 IMDAIEREKYGVNGRQK 423
            +DA+ +    + G QK
Sbjct: 402 FLDAVNKV---IKGYQK 415
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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 26/87 (29%), Positives = 47/87 (54%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL  +L K+    D  +  +++A  T G  GA+L N+VN+AAL AA  G ++V  ++
Sbjct: 512 RTEILKWYLNKIKF--DQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKE 569

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGLT 393
           +  + ++   G   R    D+  + +T
Sbjct: 570 LEFSKDKILMGPERRSVEIDNKNKTIT 596
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>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +I  +H R +  E D  I  +L+A + P   GAD+ ++  EA + A R     V  +D
Sbjct: 343 RTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 400

Query: 473 IMDAIEREKYGVNGRQK 423
            +DA+ +    + G QK
Sbjct: 401 FLDAVNKV---IKGYQK 414
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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 26/87 (29%), Positives = 47/87 (54%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL  +L K+    D  +  +++A  T G  GA+L N+VN+AAL AA  G ++V  ++
Sbjct: 454 RTEILKWYLNKIKF--DKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKE 511

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGLT 393
           +  + ++   G   R    D+  + +T
Sbjct: 512 LEFSKDKILMGPERRSVEIDNKNKTIT 538
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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 26/87 (29%), Positives = 47/87 (54%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL  +L K+    D  +  +++A  T G  GA+L N+VN+AAL AA  G ++V  ++
Sbjct: 454 RTEILKWYLNKIKF--DKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKE 511

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGLT 393
           +  + ++   G   R    D+  + +T
Sbjct: 512 LEFSKDKILMGPERRSVEIDNKNKTIT 538
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>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R ++L +H + + L ED ++  + V+  T G VGADLA +  EAAL   R   D++  +D
Sbjct: 381 RLEVLRIHTKNMKLAEDVDL--ERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438
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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARR 501
           R +IL +H R +PL +D  +    +A+ T G VGAD+ ++  EAA+ A RR
Sbjct: 362 REEILKIHTRGMPLSDDVNL--STLADDTHGFVGADIESLSKEAAMRALRR 410



 Score = 36.2 bits (82), Expect = 0.088
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGD 492
           R +IL +H +  PL  D  +    +A    G VG+DLANI  EAA+ A R   D
Sbjct: 636 REQILKIHTQDTPLAADVSL--RELAERADGYVGSDLANIAREAAIEALRDDED 687
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>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R ++L +H + + L E+ ++  + ++  T G VGADLA +  EAAL   R   D++  ED
Sbjct: 381 RLEVLGIHTKNMKLAEEVDL--ERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLED 438

Query: 473 IMDAIERE 450
             D I+ E
Sbjct: 439 --DTIDAE 444
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>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 23/67 (34%), Positives = 36/67 (53%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL VH R++ L+    +    +A +T G  GADL  I  EA + A R     V +ED
Sbjct: 316 RLEILKVHTRRMKLKG---VDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQED 372

Query: 473 IMDAIER 453
            + A+++
Sbjct: 373 FLKAVDK 379
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>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV-ARE 477
           R +IL +H + + L +D ++  + +A  T G VG+DLA++ +EAA+   R   D++   E
Sbjct: 397 RLEILRIHTKNMKLADDVDL--EQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE 454

Query: 476 DIMDAIEREKYGV 438
           D +DA   +  GV
Sbjct: 455 DEIDAEVLDSLGV 467
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>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIV-ARE 477
           R ++L +H + + L +D ++  + +A  T G VGAD+A++ +EAA+   R   D++   E
Sbjct: 387 RLEVLRIHTKNMKLADDVDL--EALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDE 444

Query: 476 DIMDAIEREKYGV 438
           D +DA   +  GV
Sbjct: 445 DEIDAEVLDSLGV 457



 Score = 37.0 bits (84), Expect = 0.051
 Identities = 28/95 (29%), Positives = 41/95 (43%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL   LRK PLE   E+    +A  T G  GADL  IV  AA  A +   +   + +
Sbjct: 663 RLSILNAQLRKTPLEPGLELTA--IAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHE 720

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGLTKLFPWLPK 369
               ++ E   V    +G  + +E      P++ K
Sbjct: 721 AEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITK 755
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>FTSH_POPEU (P84578) Cell division protein ftsH homolog, chloroplast (EC|
           3.4.24.-) (Fragments)
          Length = 47

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = -3

Query: 569 TPGLVGADLANIVNEAALLAARR 501
           TPG  GADLAN++NEAA+LA RR
Sbjct: 25  TPGFSGADLANLLNEAAILAGRR 47
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>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 24/67 (35%), Positives = 33/67 (49%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           ++KIL +H  K+ L ED  +  + +      L GAD+  +  EA LLA R     V  ED
Sbjct: 358 KKKILGIHTSKMNLSEDVNL--ETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAED 415

Query: 473 IMDAIER 453
              A ER
Sbjct: 416 FKQAKER 422
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>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 37.4 bits (85), Expect = 0.039
 Identities = 24/67 (35%), Positives = 33/67 (49%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +I  +H RK+ L ED +     +A +T G  GAD+  I  EA + A R     V   D
Sbjct: 317 RIQIFKIHTRKMKLAEDVDF--KELARITEGASGADIKAICTEAGMFAIREERAKVTMLD 374

Query: 473 IMDAIER 453
              AIE+
Sbjct: 375 FTKAIEK 381
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>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 37.4 bits (85), Expect = 0.039
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAAR 504
           R KIL+V L+   L+ED E    L+A+ T G  G+DL  +  EAAL AA+
Sbjct: 263 RYKILSVLLKDTKLDED-EFDLQLIADNTKGFSGSDLKELCREAALDAAK 311
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>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score = 36.6 bits (83), Expect = 0.067
 Identities = 25/67 (37%), Positives = 36/67 (53%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H  ++ +  DS    DL A+ T    GA LA++  EA + A R   D V R+D
Sbjct: 328 RERILEIHAGEMNVA-DSVDFSDLAAD-TAEFSGAQLASLATEAGMFAIRDDRDEVHRQD 385

Query: 473 IMDAIER 453
             DA E+
Sbjct: 386 FDDAYEK 392
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>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 855

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 23/51 (45%), Positives = 29/51 (56%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARR 501
           R +IL    RK+ L E     C L A++TPG VGADL  +  EAA+ A  R
Sbjct: 439 RERILQTLCRKLRLPETFNF-CHL-AHLTPGFVGADLMALCREAAMCAVNR 487
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>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDL--VANVTPGLVGADLANIVNEAALLAARRGGDIVAR 480
           R +IL +H  K+ L+       DL  VA +   +VGADL  +  EA + A R   + +  
Sbjct: 324 RLEILKIHTEKMNLKG-----VDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378

Query: 479 EDIMDAIER 453
           +D  +AI +
Sbjct: 379 DDFREAISK 387
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>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 856

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARR 501
           R +IL    RK+ L +  +  C L A++TPG VGADL  +  EAA+ A  R
Sbjct: 440 RERILQTLCRKLRLPQAFDF-CHL-AHLTPGFVGADLMALCREAAMCAVNR 488
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>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 23/67 (34%), Positives = 34/67 (50%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           +RKI  +H  K+ L ED  +  + +      L GA++  IV+EA LLA R     V  +D
Sbjct: 368 KRKIFTIHTSKMNLGEDVNL--EELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDD 425

Query: 473 IMDAIER 453
              A E+
Sbjct: 426 FRQAREK 432
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>CHI1_HORVU (P11955) 26 kDa endochitinase 1 precursor (EC 3.2.1.14)|
          Length = 318

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 579 C*CDPRIGWCRSSKHC**GCSTSCSKRWRYCGSG 478
           C C  R GWC S+ +C  GC + CS     CG G
Sbjct: 34  CLCCSRFGWCGSTPYCGDGCQSQCSG----CGGG 63
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>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +I  +H  KV  ++  E   +    ++ G  GAD+ N   EA   A R   D +  +D
Sbjct: 357 RLEIFKIHTAKV--KKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDD 414

Query: 473 IMDAIER 453
           +M A+ +
Sbjct: 415 LMKAVRK 421
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>CHIA_SECCE (Q9FRV1) Basic endochitinase A precursor (EC 3.2.1.14) (Rye seed|
           chitinase-a) (RSC-a)
          Length = 321

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 579 C*CDPRIGWCRS-SKHC**GCSTSCSKRWRYCGSGG 475
           C C  R GWC S S +C  GC + C+     CG GG
Sbjct: 34  CLCCSRFGWCGSTSDYCGDGCQSQCAG----CGGGG 65
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>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H RK+ L     +    +A + PG  GA++  +  EA + A R     V +ED
Sbjct: 319 RLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 376

Query: 473 IMDAIER 453
              A+ +
Sbjct: 377 FEMAVAK 383
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>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H RK+ L     +    +A + PG  GA++  +  EA + A R     V +ED
Sbjct: 321 RLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 378

Query: 473 IMDAIER 453
              A+ +
Sbjct: 379 FEMAVAK 385
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>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H RK+ L     +    +A + PG  GA++  +  EA + A R     V +ED
Sbjct: 324 RLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 381

Query: 473 IMDAIER 453
              A+ +
Sbjct: 382 FEMAVAK 388
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>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H RK+ L     +    +A + PG  GA++  +  EA + A R     V +ED
Sbjct: 325 RLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

Query: 473 IMDAIER 453
              A+ +
Sbjct: 383 FEMAVAK 389
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>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H RK+ L     +    +A + PG  GA++  +  EA + A R     V +ED
Sbjct: 325 RLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

Query: 473 IMDAIER 453
              A+ +
Sbjct: 383 FEMAVAK 389
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>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H RK+ L     +    +A + PG  GA++  +  EA + A R     V +ED
Sbjct: 325 RLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

Query: 473 IMDAIER 453
              A+ +
Sbjct: 383 FEMAVAK 389
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>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H RK+ L     +    +A + PG  GA++  +  EA + A R     V +ED
Sbjct: 325 RLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

Query: 473 IMDAIER 453
              A+ +
Sbjct: 383 FEMAVAK 389
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>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R  IL +H RK+ L     +    +A + PG  GA++  +  EA + A R     V +ED
Sbjct: 325 RLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

Query: 473 IMDAIER 453
              A+ +
Sbjct: 383 FEMAVAK 389
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>LONH_PYRAB (Q9UYC6) Putative protease La homolog (EC 3.4.21.-) [Contains: Pab|
           lon intein]
          Length = 998

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 548 DLANIVNEAALLAARRGGDIVAREDIMDAIEREK 447
           DL  +V  A  +A R+G   V RED+++A++  K
Sbjct: 716 DLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAK 749
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>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARR 501
           R KIL +  RK      +  I D +A +T G  GADL ++  EAAL++ +R
Sbjct: 591 RFKILQIQTRKWSSPLSTNFI-DKLAFLTKGYGGADLRSLCTEAALISIQR 640
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>SPG16_HUMAN (Q8N0X2) Sperm-associated antigen 16 protein (PF20 protein homolog)|
          Length = 631

 Score = 26.9 bits (58), Expect(2) = 3.7
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -1

Query: 241 HEQGDLLGTIARQQNIQFKSICEGDCTV----HSVGQWT 137
           H  GD L T +    ++   +C GDC +    HS   W+
Sbjct: 403 HPSGDKLATSSGDTTVKLWDLCTGDCILTFEGHSRAVWS 441



 Score = 22.3 bits (46), Expect(2) = 3.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 107 LDKQKTVTDDNRLACECAIHG 45
           LDK   + D N   C C ++G
Sbjct: 456 LDKTSKIWDVNSERCRCTLYG 476
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>LONH_PYRHO (O58221) Putative protease La homolog (EC 3.4.21.-) [Contains: Pho|
           lon intein]
          Length = 1127

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 548 DLANIVNEAALLAARRGGDIVAREDIMDAIEREK 447
           DL  +V  A  +A R+G   V RED+++A++  K
Sbjct: 847 DLGGVVRAAGDIAVRKGKKYVTREDVLEALKLAK 880
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>SYK_ORYSA (Q6F2U9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 602

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -1

Query: 469 WMPLRGKNMGSMVDKRVLILQEKALPSYFHGYLNLEINHQIQMIFK 332
           W P  G+N    ++K VL  QE     Y   YL+L +NH+++ IFK
Sbjct: 234 WAPGMGRN----IEKYVLRDQETR---YRQRYLDLMVNHEVRHIFK 272
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>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 25/71 (35%), Positives = 40/71 (56%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL+V  +K+ LE   +     +A +TPG VGADL ++    A LA R+     A + 
Sbjct: 416 RAEILSVVAQKLRLEGPFDK--KRIARLTPGFVGADLESV----AYLAGRK-----AIKR 464

Query: 473 IMDAIEREKYG 441
           I+D+ + E+ G
Sbjct: 465 ILDSRKSEQSG 475
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>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 27/90 (30%), Positives = 39/90 (43%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           R +IL +H R + L    ++    +A    G  GA+L  +  EA + A R     V +ED
Sbjct: 322 RAEILRIHSRSMNLTRGIDL--KSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQED 379

Query: 473 IMDAIEREKYGVNGRQKGPDSAREGLTKLF 384
              A+ +         KG DS    L KLF
Sbjct: 380 FELAVAKV------LNKG-DSGEMSLQKLF 402
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>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = -3

Query: 653 RRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVARED 474
           RR+I  +H  K+ L +D  +  +          GAD+  I  EA LLA R     V   D
Sbjct: 369 RRRIFQIHTSKMTLADDVNL--EEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHAD 426

Query: 473 IMDAIER 453
              A E+
Sbjct: 427 FKKAKEK 433
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>ACHA7_BOVIN (P54131) Neuronal acetylcholine receptor protein, alpha-7 subunit|
           precursor
          Length = 499

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +1

Query: 358 LFPDLGNHGNSLVRPSLAESGPFCLPLTPYFSLSMASII 474
           L+ DL  + N L RP   +S    LPLT YFSLS+  I+
Sbjct: 26  LYKDLVKNYNPLERPVANDS----LPLTVYFSLSLLQIM 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,072,111
Number of Sequences: 219361
Number of extensions: 2127682
Number of successful extensions: 5618
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 5414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5594
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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