Clone Name | rbasd25b09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK064852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H05, full insert sequence Length = 1754 Score = 383 bits (193), Expect = e-103 Identities = 289/321 (90%) Strand = Plus / Minus Query: 320 tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 379 ||||| ||| ||||||||||| |||||||| |||||||||| ||| ||| || ||||| Sbjct: 1400 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 1341 Query: 380 ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 439 | ||| | || |||||||||||||||||||||||||| || || ||||||||| ||| Sbjct: 1340 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 1281 Query: 440 gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcctt 499 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1280 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcctt 1221 Query: 500 gacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccatcacc 559 ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1220 gacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccatcacc 1161 Query: 560 aacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctccattgg 619 |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| Sbjct: 1160 aacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccacccattgg 1101 Query: 620 actgtaaaaaagaagcaacca 640 ||||||||||||||| ||||| Sbjct: 1100 actgtaaaaaagaagtaacca 1080
>gb|AY107119.1| Zea mays PCO095102 mRNA sequence Length = 1007 Score = 331 bits (167), Expect = 2e-87 Identities = 284/323 (87%) Strand = Plus / Minus Query: 314 tcaggctctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaa 373 ||||||||||| || |||| |||||| |||||||||||||| |||||||| |||||| Sbjct: 646 tcaggctctgacgggcgatgacttctcaacaacaagggtaaggaacaggaatgagccaaa 587 Query: 374 ggagatggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggct 433 ||||||| |||| | || ||||||| || |||||||||||| || |||||||||||||| Sbjct: 586 ggagatgacgagagccgcggccatcaggagaagcatggcttgcagcgtgatgcttgggct 527 Query: 434 caagaagaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgc 493 || ||||||||||||||||||||| || || ||||| ||||||| ||||||||| || || Sbjct: 526 caggaagaagatgactgcgatggcgcccgactgccacaccttcagctgtgcaaaggcagc 467 Query: 494 ttccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactcc 553 ||||||||||| |||||||| | |||||||||||| |||||||||||||||||||| || Sbjct: 466 ctccttgacatcttcgaacagaagcccaagtaatgcacttaactgtgtattcaagacacc 407 Query: 554 atcaccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctc 613 |||||||||||||| ||||||||||| |||| ||| |||||||| ||||||||||| || Sbjct: 406 gtcaccaacaccccacaaggcacctatgaataatggtatcgctgcgccaagcagtccatc 347 Query: 614 cattggactgtaaaaaagaagca 636 ||||||||||||||||||||||| Sbjct: 346 cattggactgtaaaaaagaagca 324
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Plus Query: 496 ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 555 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| Sbjct: 23342299 ccttgacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccat 23342358 Query: 556 caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 615 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct: 23342359 caccaacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccaccca 23342418 Query: 616 ttggactgta 625 |||||||||| Sbjct: 23342419 ttggactgta 23342428 Score = 172 bits (87), Expect = 9e-40 Identities = 156/179 (87%) Strand = Plus / Plus Query: 320 tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 379 ||||| ||| ||||||||||| |||||||| |||||||||| ||| ||| || ||||| Sbjct: 23341977 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 23342036 Query: 380 ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 439 | ||| | || |||||||||||||||||||||||||| || || ||||||||| ||| Sbjct: 23342037 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 23342096 Query: 440 gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 498 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 23342097 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcct 23342155 Score = 163 bits (82), Expect = 9e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 496 ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 555 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 23336657 ccttgacatcctcgaacagcagcccaagtaatgcgcttaactgtgtatgtaagacaccat 23336716 Query: 556 caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 615 |||||||||||||||| ||||||||||| ||||||| || |||||||||| ||| ||| Sbjct: 23336717 caccaacaccccataaagcacctataaacagtggaactgccgcaccaagcaatccaccca 23336776 Query: 616 ttggactgta 625 |||||||||| Sbjct: 23336777 ttggactgta 23336786 Score = 157 bits (79), Expect = 5e-35 Identities = 154/179 (86%) Strand = Plus / Plus Query: 320 tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 379 |||| |||| ||||||||||| |||||||| |||||||||| ||| ||| || ||||| Sbjct: 23336335 tctggtggtcgatggcttctccacaacaagtgtaagtaacaagaatgagccgaaagagat 23336394 Query: 380 ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 439 | ||| | | |||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 23336395 gatgagcgcaatggccatcaagataagcatggcttgtagcgtgatatttgggctcaggaa 23336454 Query: 440 gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 498 ||||||||||||||||||||| |||||||||||| || |||||||||||||||| |||| Sbjct: 23336455 gaagatgactgcgatggcacccgattgccaaaccctccactgtgcaaaagctgcctcct 23336513
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Plus Query: 496 ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 555 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| Sbjct: 23270490 ccttgacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccat 23270549 Query: 556 caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 615 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct: 23270550 caccaacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccaccca 23270609 Query: 616 ttggactgta 625 |||||||||| Sbjct: 23270610 ttggactgta 23270619 Score = 172 bits (87), Expect = 9e-40 Identities = 156/179 (87%) Strand = Plus / Plus Query: 320 tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 379 ||||| ||| ||||||||||| |||||||| |||||||||| ||| ||| || ||||| Sbjct: 23270168 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 23270227 Query: 380 ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 439 | ||| | || |||||||||||||||||||||||||| || || ||||||||| ||| Sbjct: 23270228 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 23270287 Query: 440 gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 498 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 23270288 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcct 23270346 Score = 163 bits (82), Expect = 9e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 496 ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 555 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 23264848 ccttgacatcctcgaacagcagcccaagtaatgcgcttaactgtgtatgtaagacaccat 23264907 Query: 556 caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 615 |||||||||||||||| ||||||||||| ||||||| || |||||||||| ||| ||| Sbjct: 23264908 caccaacaccccataaagcacctataaacagtggaactgccgcaccaagcaatccaccca 23264967 Query: 616 ttggactgta 625 |||||||||| Sbjct: 23264968 ttggactgta 23264977 Score = 157 bits (79), Expect = 5e-35 Identities = 154/179 (86%) Strand = Plus / Plus Query: 320 tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 379 |||| |||| ||||||||||| |||||||| |||||||||| ||| ||| || ||||| Sbjct: 23264526 tctggtggtcgatggcttctccacaacaagtgtaagtaacaagaatgagccgaaagagat 23264585 Query: 380 ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 439 | ||| | | |||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 23264586 gatgagcgcaatggccatcaagataagcatggcttgtagcgtgatatttgggctcaggaa 23264645 Query: 440 gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 498 ||||||||||||||||||||| |||||||||||| || |||||||||||||||| |||| Sbjct: 23264646 gaagatgactgcgatggcacccgattgccaaaccctccactgtgcaaaagctgcctcct 23264704
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Plus Query: 496 ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 555 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| Sbjct: 155417 ccttgacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccat 155476 Query: 556 caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 615 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct: 155477 caccaacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccaccca 155536 Query: 616 ttggactgta 625 |||||||||| Sbjct: 155537 ttggactgta 155546 Score = 172 bits (87), Expect = 9e-40 Identities = 156/179 (87%) Strand = Plus / Plus Query: 320 tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 379 ||||| ||| ||||||||||| |||||||| |||||||||| ||| ||| || ||||| Sbjct: 155095 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 155154 Query: 380 ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 439 | ||| | || |||||||||||||||||||||||||| || || ||||||||| ||| Sbjct: 155155 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 155214 Query: 440 gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 498 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 155215 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcct 155273 Score = 163 bits (82), Expect = 9e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 496 ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 555 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 149775 ccttgacatcctcgaacagcagcccaagtaatgcgcttaactgtgtatgtaagacaccat 149834 Query: 556 caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 615 |||||||||||||||| ||||||||||| ||||||| || |||||||||| ||| ||| Sbjct: 149835 caccaacaccccataaagcacctataaacagtggaactgccgcaccaagcaatccaccca 149894 Query: 616 ttggactgta 625 |||||||||| Sbjct: 149895 ttggactgta 149904 Score = 157 bits (79), Expect = 5e-35 Identities = 154/179 (86%) Strand = Plus / Plus Query: 320 tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 379 |||| |||| ||||||||||| |||||||| |||||||||| ||| ||| || ||||| Sbjct: 149453 tctggtggtcgatggcttctccacaacaagtgtaagtaacaagaatgagccgaaagagat 149512 Query: 380 ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 439 | ||| | | |||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 149513 gatgagcgcaatggccatcaagataagcatggcttgtagcgtgatatttgggctcaggaa 149572 Query: 440 gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 498 ||||||||||||||||||||| |||||||||||| || |||||||||||||||| |||| Sbjct: 149573 gaagatgactgcgatggcacccgattgccaaaccctccactgtgcaaaagctgcctcct 149631
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Minus Query: 496 ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 555 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| Sbjct: 159860 ccttgacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccat 159801 Query: 556 caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 615 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct: 159800 caccaacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccaccca 159741 Query: 616 ttggactgta 625 |||||||||| Sbjct: 159740 ttggactgta 159731 Score = 172 bits (87), Expect = 9e-40 Identities = 156/179 (87%) Strand = Plus / Minus Query: 320 tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 379 ||||| ||| ||||||||||| |||||||| |||||||||| ||| ||| || ||||| Sbjct: 160182 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 160123 Query: 380 ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 439 | ||| | || |||||||||||||||||||||||||| || || ||||||||| ||| Sbjct: 160122 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 160063 Query: 440 gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 498 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 160062 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcct 160004
>gb|AF377447.1| Zea mays subsp. mays clone GUA131 anonymous genomic RFLP marker Asg26 Length = 769 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 222 tggtcaatacaacagtgtggttgtgc 247 |||||||||||| ||||||||||||| Sbjct: 454 tggtcaatacaagagtgtggttgtgc 479
>emb|AJ564638.1|LSY564638 Lily symptomless virus genes for polymerase, TGBp1, TGBp2, TGBp3, coat protein and nucleic acid binding protein genomic RNA, isolate Sb Length = 8393 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 483 gcaaaagctgcttccttgacat 504 |||||||||||||||||||||| Sbjct: 3260 gcaaaagctgcttccttgacat 3239
>ref|XM_653411.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0899.2), mRNA Length = 2385 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 cctcgaacctcttcacttcag 118 ||||||||||||||||||||| Sbjct: 1324 cctcgaacctcttcacttcag 1344
>ref|XM_387252.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07076.1) partial mRNA Length = 3288 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 tgcttgggctcaagaagaaga 444 ||||||||||||||||||||| Sbjct: 3209 tgcttgggctcaagaagaaga 3229
>gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence Length = 171942 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 agtgtggttgtgcatgctgtt 255 ||||||||||||||||||||| Sbjct: 55875 agtgtggttgtgcatgctgtt 55855
>emb|AL844570.9| Zebrafish DNA sequence from clone DKEY-20D18, complete sequence Length = 240816 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 tcttcacttcagacctccagc 127 ||||||||||||||||||||| Sbjct: 107081 tcttcacttcagacctccagc 107061
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 catcctcgaacagcaacccaagta 525 |||||||||||||||||| ||||| Sbjct: 78011 catcctcgaacagcaaccaaagta 77988
>gb|AY714308.1| Drosophila sechellia Mitch (mitch) gene, complete cds Length = 1220 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aagctgcttccttgacatcc 506 |||||||||||||||||||| Sbjct: 212 aagctgcttccttgacatcc 193
>gb|AY714307.1| Drosophila mauritiana Mitch (mitch) gene, complete cds Length = 1228 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aagctgcttccttgacatcc 506 |||||||||||||||||||| Sbjct: 212 aagctgcttccttgacatcc 193
>gb|AY714306.1| Drosophila simulans Mitch (mitch) gene, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aagctgcttccttgacatcc 506 |||||||||||||||||||| Sbjct: 212 aagctgcttccttgacatcc 193
>gb|AC009393.5| Drosophila melanogaster clone BACR17F05, complete sequence Length = 198037 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aagctgcttccttgacatcc 506 |||||||||||||||||||| Sbjct: 125911 aagctgcttccttgacatcc 125892
>gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome 19, complete sequence Length = 212472 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cttgggctcaagaagaagat 445 |||||||||||||||||||| Sbjct: 165852 cttgggctcaagaagaagat 165871
>gb|AC124362.3| Mus musculus BAC clone RP24-528N1 from chromosome 13, complete sequence Length = 173382 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 gcttgggctcaagaagaaga 444 |||||||||||||||||||| Sbjct: 42107 gcttgggctcaagaagaaga 42088
>emb|AL118512.9|HSG248A21 Human DNA sequence from clone GS1-248A21 on chromosome 1q31.1-31.3 Contains part of the gene for hemicentin (FIBL-6), complete sequence Length = 83063 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 gctcttccttctcagtttcatatc 219 ||||||||||||||||||| |||| Sbjct: 35311 gctcttccttctcagtttcttatc 35288
>dbj|AB207888.1| Pinus densiflora DNA, microsatellite marker pdms039 Length = 815 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 cctgtaacatgacatagtaaaagt 51 |||||||||||| ||||||||||| Sbjct: 77 cctgtaacatgaaatagtaaaagt 54
>ref|NM_141982.2| Drosophila melanogaster CG7242-RA (CG7242), mRNA Length = 965 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aagctgcttccttgacatcc 506 |||||||||||||||||||| Sbjct: 232 aagctgcttccttgacatcc 213
>dbj|AK154638.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101N06 product:unclassifiable, full insert sequence Length = 964 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cttgggctcaagaagaagat 445 |||||||||||||||||||| Sbjct: 237 cttgggctcaagaagaagat 256
>gb|AC151737.3| Pan troglodytes BAC clone RP43-70B8 from chromosome 7, complete sequence Length = 212458 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 tcaagataagcatggcttgt 416 |||||||||||||||||||| Sbjct: 201663 tcaagataagcatggcttgt 201682
>gb|AY051881.1| Drosophila melanogaster LD37196 full insert cDNA Length = 966 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aagctgcttccttgacatcc 506 |||||||||||||||||||| Sbjct: 219 aagctgcttccttgacatcc 200
>gb|AF219224.1|AF219224 Drosophila melanogaster clone BDGP LD37196 unknown mRNA, complete cds Length = 953 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aagctgcttccttgacatcc 506 |||||||||||||||||||| Sbjct: 220 aagctgcttccttgacatcc 201
>gb|AC006145.2|AC006145 Homo sapiens PAC clone RP4-560O14 from 7q21.1-q21.2, complete sequence Length = 144659 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tcaagataagcatggcttgt 416 |||||||||||||||||||| Sbjct: 3582 tcaagataagcatggcttgt 3563
>gb|AC006230.11|AC006230 Homo sapiens chromosome 4 clone C0287J14 map 4p16, complete sequence Length = 166998 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 agctgcttccttgacatcct 507 |||||||||||||||||||| Sbjct: 153371 agctgcttccttgacatcct 153390
>gb|AE003698.3| Drosophila melanogaster chromosome 3R, section 36 of 118 of the complete sequence Length = 247955 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aagctgcttccttgacatcc 506 |||||||||||||||||||| Sbjct: 46025 aagctgcttccttgacatcc 46006
>gb|AC111082.23| Mus musculus chromosome 17, clone RP23-140I9, complete sequence Length = 171550 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gacaacaagggtaagtaaca 360 |||||||||||||||||||| Sbjct: 59753 gacaacaagggtaagtaaca 59772
>gb|AC140345.3| Mus musculus BAC clone RP24-66E22 from 13, complete sequence Length = 238541 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gcttgggctcaagaagaaga 444 |||||||||||||||||||| Sbjct: 14552 gcttgggctcaagaagaaga 14571
>gb|DQ004855.1| Listeria bacteriophage P100, complete genome Length = 131384 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ataaggcacctataaatagt 587 |||||||||||||||||||| Sbjct: 98653 ataaggcacctataaatagt 98634
>gb|AC090939.2| Homo sapiens chromosome 3 clone RP11-127I14 map 3p, complete sequence Length = 161366 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 atggatgatgatgctcttccttct 207 ||||||||||||||| |||||||| Sbjct: 106588 atggatgatgatgctattccttct 106611 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,372,721 Number of Sequences: 3902068 Number of extensions: 5372721 Number of successful extensions: 104889 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104707 Number of HSP's gapped (non-prelim): 182 length of query: 640 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 617 effective length of database: 17,143,297,704 effective search space: 10577414683368 effective search space used: 10577414683368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)