ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24m09 |
|---|---|
| Clone Library Name | barley_pub |
>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf| thionin; Acidic protein] Length = 137 Score = 79.0 bits (193), Expect = 3e-15 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = -2 Query: 271 MDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA 164 MDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA Sbjct: 102 MDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA 137
>THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic| protein] Length = 137 Score = 77.4 bits (189), Expect = 9e-15 Identities = 35/36 (97%), Positives = 36/36 (100%) Frame = -2 Query: 271 MDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA 164 MDNVSRGQEMKFDMGLCSNACARFCNDG+VIQSVEA Sbjct: 102 MDNVSRGQEMKFDMGLCSNACARFCNDGEVIQSVEA 137
>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific| thionin; Acidic protein] Length = 137 Score = 77.4 bits (189), Expect = 9e-15 Identities = 35/36 (97%), Positives = 36/36 (100%) Frame = -2 Query: 271 MDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA 164 MDNVSRGQEMKFDMGLCSNACARFCNDG+VIQSVEA Sbjct: 102 MDNVSRGQEMKFDMGLCSNACARFCNDGEVIQSVEA 137
>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:| Leaf-specific thionin BTH6; Acidic protein] Length = 137 Score = 73.6 bits (179), Expect = 1e-13 Identities = 34/36 (94%), Positives = 34/36 (94%) Frame = -2 Query: 271 MDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA 164 MDNV RGQEMKFDMGLCSNACARFCNDG VIQSVEA Sbjct: 102 MDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contains:| Leaf-specific thionin DB4; Acidic protein] Length = 137 Score = 73.6 bits (179), Expect = 1e-13 Identities = 34/36 (94%), Positives = 34/36 (94%) Frame = -2 Query: 271 MDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA 164 MDNV RGQEMKFDMGLCSNACARFCNDG VIQSVEA Sbjct: 102 MDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>LTBP2_RAT (O35806) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1764 Score = 31.6 bits (70), Expect = 0.55 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -2 Query: 199 CNDGDVIQSVEA*SCLLGHDFYGQGRFVIFCSTILIPSPDRSKCI 65 C D D + E CL GH +G F C T P+PD +C+ Sbjct: 1206 CQDVDECATTEP--CLGGHCVNTEGSFNCLCETGFQPAPDSGECV 1248
>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1821 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -2 Query: 199 CNDGDVIQSVEA*SCLLGHDFYGQGRFVIFCSTILIPSPDRSKCI 65 C D D + + C+ GH +G F C T PSP+ +C+ Sbjct: 1216 CQDVDECATTDP--CVGGHCVNTEGSFNCLCETGFQPSPESGECV 1258
>DGKQ_HUMAN (P52824) Diacylglycerol kinase theta (EC 2.7.1.107) (Diglyceride| kinase theta) (DGK-theta) (DAG kinase theta) Length = 942 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Frame = +1 Query: 169 QQTE*HHHHYRNGHM----RC--CRVPCRISSLGHGKHC 267 Q + HHHH+R G++ RC CR C S + G C Sbjct: 177 QDHDTHHHHWREGNLPSGARCEVCRKTCGSSDVLAGVRC 215
>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;| Acidic protein] Length = 136 Score = 28.5 bits (62), Expect = 4.7 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -2 Query: 250 QEMKFDMGLCSNACARFCNDGDV 182 +EMK + CS+AC FCN GDV Sbjct: 108 EEMKLYVEHCSDACVNFCN-GDV 129
>OTX1_RAT (Q63410) Homeobox protein OTX1| Length = 355 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +1 Query: 130 GHRNHAQEGMIRLQQTE*HHHHYRNGH 210 GH +H L Q+ HHHH+ + H Sbjct: 274 GHHHHHPHAHHPLSQSSGHHHHHHHHH 300
>OTX1_MOUSE (P80205) Homeobox protein OTX1| Length = 355 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +1 Query: 130 GHRNHAQEGMIRLQQTE*HHHHYRNGH 210 GH +H L Q+ HHHH+ + H Sbjct: 274 GHHHHHPHAHHPLSQSSGHHHHHHHHH 300
>OTX1_HUMAN (P32242) Homeobox protein OTX1| Length = 354 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +1 Query: 130 GHRNHAQEGMIRLQQTE*HHHHYRNGH 210 GH +H L Q+ HHHH+ + H Sbjct: 274 GHHHHHPHAHHPLSQSSGHHHHHHHHH 300
>CAUP_DROME (P54269) Homeobox protein caupolican| Length = 693 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +1 Query: 136 RNHAQEGMIRLQQTE*HHHHYRNGH 210 + H Q+ + +LQQ + HHHH + H Sbjct: 501 QQHQQQQLQQLQQQQQHHHHPHHHH 525 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,989,025 Number of Sequences: 219361 Number of extensions: 668990 Number of successful extensions: 1824 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1524 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1735 length of database: 80,573,946 effective HSP length: 66 effective length of database: 66,096,120 effective search space used: 1586306880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
