ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge... 234 3e-58
2gb|BC053687.1| Homo sapiens zinc finger protein 22 (KOX 15), mRN... 44 0.61
3ref|XM_521459.1| PREDICTED: Pan troglodytes similar to Zinc fing... 44 0.61
4gb|BC010642.1| Homo sapiens zinc finger protein 22 (KOX 15), mRN... 44 0.61
5ref|NM_006963.3| Homo sapiens zinc finger protein 22 (KOX 15) (Z... 44 0.61
6gb|BT009806.1| Homo sapiens zinc finger protein 22 (KOX 15) mRNA... 44 0.61
7emb|AL353801.13| Human DNA sequence from clone RP11-285G1 on chr... 44 0.61
8gb|AY137767.1| Homo sapiens Kruppel-type zinc finger protein KRO... 44 0.61
9gb|BC026193.1| Homo sapiens zinc finger protein 22 (KOX 15), mRN... 44 0.61
10emb|CR861114.1| Pongo pygmaeus mRNA; cDNA DKFZp459E0114 (from cl... 44 0.61
11gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence 44 0.61
12gb|AC123978.5| Papio anubis clone rp41-211d5, complete sequence 44 0.61
13gb|S50223.1| HKR-T1=Kruppel-like zinc finger protein [human, MOL... 44 0.61
14gb|AY889139.1| Synthetic construct Homo sapiens clone FLH109823.... 44 0.61
15gb|AY889138.1| Synthetic construct Homo sapiens clone FLH109822.... 44 0.61
16gb|AY889137.1| Synthetic construct Homo sapiens clone FLH109819.... 44 0.61
17gb|AY889136.1| Synthetic construct Homo sapiens clone FLH109818.... 44 0.61
18gb|AC151283.2| Mus musculus BAC clone RP23-463A14 from 17, compl... 44 0.61
19gb|BC041139.1| Homo sapiens zinc finger protein 22 (KOX 15), mRN... 44 0.61
20gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, comp... 42 2.4
21ref|XM_590628.2| PREDICTED: Bos taurus similar to zinc finger pr... 42 2.4
22gb|AC116695.12| Mus musculus chromosome 1, clone RP24-407C10, co... 42 2.4
23ref|XM_780107.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.4
24gb|AC129415.1| Homo sapiens 3 BAC RP11-382L10 (Roswell Park Canc... 42 2.4
25gb|AC152955.2| Mus musculus 6 BAC RP23-377G14 (Roswell Park Canc... 42 2.4
26gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, co... 42 2.4
27gb|AC101831.7| Mus musculus chromosome 15, clone RP24-491D12, co... 40 9.6
28gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, com... 40 9.6
29gb|AC113439.14| Mus musculus chromosome 10, clone RP23-193K15, c... 40 9.6
30gb|AC146267.3| Pan troglodytes BAC clone CH251-55N11 from X, com... 40 9.6
31gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 40 9.6
32gb|AC115028.17| Mus musculus chromosome 5, clone RP24-245G22, co... 40 9.6
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.6
34gb|AC118211.10| Mus musculus chromosome 8, clone RP24-223O5, com... 40 9.6
35emb|Z47069.1|CEF36G3 Caenorhabditis elegans Cosmid F36G3, comple... 40 9.6
36ref|XM_718578.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.6
37ref|XM_732295.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.6
38gb|AC110917.11| Mus musculus, clone RP23-155I20, complete sequence 40 9.6
39emb|AL356057.12| Human DNA sequence from clone RP11-474L11 on ch... 40 9.6
40gb|AC162364.6| Mus musculus chromosome 15, clone RP24-117M19, co... 40 9.6
41gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, comp... 40 9.6
42emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in ... 40 9.6
43emb|CR524483.7| Zebrafish DNA sequence from clone DKEY-151P21 in... 40 9.6
44gb|AC026702.6| Homo sapiens chromosome 5 clone CTC-575I10, compl... 40 9.6
45dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
46gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 40 9.6
47gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosom... 40 9.6
48gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 9.6
49gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome 40 9.6
50emb|BX470255.18| Zebrafish DNA sequence from clone DKEY-76A14 in... 40 9.6
51dbj|AP004250.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 9.6 
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score =  234 bits (118), Expect = 3e-58
 Identities = 118/118 (100%)
 Strand = Plus / Minus

                                                                         
Query: 118   agaggctatcgctcgtttaccgcagatctctatcccacagctggctaataaaatcgcctt 177
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32552 agaggctatcgctcgtttaccgcagatctctatcccacagctggctaataaaatcgcctt 32493

                                                                       
Query: 178   ggcaatgtgtcaagtcctttcagtcagagttcaactcttcagcgaaagtgaaaaatct 235
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32492 ggcaatgtgtcaagtcctttcagtcagagttcaactcttcagcgaaagtgaaaaatct 32435
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>gb|BC053687.1| Homo sapiens zinc finger protein 22 (KOX 15), mRNA (cDNA clone
           MGC:61583 IMAGE:5214077), complete cds
          Length = 2160

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 326 tttcagtcagagttcaactctt 347
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>ref|XM_521459.1| PREDICTED: Pan troglodytes similar to Zinc finger protein 22 (Zinc
           finger protein KOX15) (Krox-26 protein) (LOC466057),
           mRNA
          Length = 675

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 189 tttcagtcagagttcaactctt 210
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>gb|BC010642.1| Homo sapiens zinc finger protein 22 (KOX 15), mRNA (cDNA clone
           MGC:9735 IMAGE:3852749), complete cds
          Length = 2110

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 322 tttcagtcagagttcaactctt 343
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>ref|NM_006963.3| Homo sapiens zinc finger protein 22 (KOX 15) (ZNF22), mRNA
          Length = 2630

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 783 tttcagtcagagttcaactctt 804
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>gb|BT009806.1| Homo sapiens zinc finger protein 22 (KOX 15) mRNA, complete cds
          Length = 675

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 189 tttcagtcagagttcaactctt 210
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>emb|AL353801.13| Human DNA sequence from clone RP11-285G1 on chromosome 10 Contains two
              novel genes, the gene for AD037 protein (AD037), the gene
              for a decidual protein induced by progesterone (DEPP), a
              novel gene (FLJ30567), the ZNF22 gene for zinc finger
              protein 22 (KOX 15), a novel gene and two CpG islands,
              complete sequence
          Length = 222490

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 195    tttcagtcagagttcaactctt 216
              ||||||||||||||||||||||
Sbjct: 178924 tttcagtcagagttcaactctt 178945
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>gb|AY137767.1| Homo sapiens Kruppel-type zinc finger protein KROX26 gene, complete
            cds
          Length = 4378

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 195  tttcagtcagagttcaactctt 216
            ||||||||||||||||||||||
Sbjct: 2614 tttcagtcagagttcaactctt 2635
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>gb|BC026193.1| Homo sapiens zinc finger protein 22 (KOX 15), mRNA (cDNA clone
            IMAGE:4826621)
          Length = 2484

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 195  tttcagtcagagttcaactctt 216
            ||||||||||||||||||||||
Sbjct: 1142 tttcagtcagagttcaactctt 1121
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>emb|CR861114.1| Pongo pygmaeus mRNA; cDNA DKFZp459E0114 (from clone DKFZp459E0114)
          Length = 2131

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 342 tttcagtcagagttcaactctt 363
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>gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence
          Length = 194187

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 195   tttcagtcagagttcaactctt 216
             ||||||||||||||||||||||
Sbjct: 48874 tttcagtcagagttcaactctt 48895
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>gb|AC123978.5| Papio anubis clone rp41-211d5, complete sequence
          Length = 180097

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 195   tttcagtcagagttcaactctt 216
             ||||||||||||||||||||||
Sbjct: 73121 tttcagtcagagttcaactctt 73142
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>gb|S50223.1| HKR-T1=Kruppel-like zinc finger protein [human, MOLT 4 T-cells,
           mRNA, 798 nt]
          Length = 798

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 278 tttcagtcagagttcaactctt 299
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>gb|AY889139.1| Synthetic construct Homo sapiens clone FLH109823.01X zinc finger
           protein 22 (ZNF22) mRNA, complete cds
          Length = 675

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 189 tttcagtcagagttcaactctt 210
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>gb|AY889138.1| Synthetic construct Homo sapiens clone FLH109822.01X zinc finger
           protein 22 (ZNF22) mRNA, complete cds
          Length = 675

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 189 tttcagtcagagttcaactctt 210
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>gb|AY889137.1| Synthetic construct Homo sapiens clone FLH109819.01X zinc finger
           protein 22 (ZNF22) mRNA, complete cds
          Length = 675

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 189 tttcagtcagagttcaactctt 210
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>gb|AY889136.1| Synthetic construct Homo sapiens clone FLH109818.01X zinc finger
           protein 22 (ZNF22) mRNA, complete cds
          Length = 675

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 189 tttcagtcagagttcaactctt 210
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>gb|AC151283.2| Mus musculus BAC clone RP23-463A14 from 17, complete sequence
          Length = 177340

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 237   ctgctataagaggacagaagaa 258
             ||||||||||||||||||||||
Sbjct: 32797 ctgctataagaggacagaagaa 32818
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>gb|BC041139.1| Homo sapiens zinc finger protein 22 (KOX 15), mRNA (cDNA clone
           MGC:47687 IMAGE:5751460), complete cds
          Length = 2630

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 195 tttcagtcagagttcaactctt 216
           ||||||||||||||||||||||
Sbjct: 783 tttcagtcagagttcaactctt 804
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>gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, complete sequence
          Length = 166651

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 599   caatgatggtctttcctcctc 619
             |||||||||||||||||||||
Sbjct: 68529 caatgatggtctttcctcctc 68549
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>ref|XM_590628.2| PREDICTED: Bos taurus similar to zinc finger protein 2 homolog
            (LOC513014), mRNA
          Length = 1776

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  ttcagtcagagttcaactctt 216
            |||||||||||||||||||||
Sbjct: 1039 ttcagtcagagttcaactctt 1059
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>gb|AC116695.12| Mus musculus chromosome 1, clone RP24-407C10, complete sequence
          Length = 199978

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 599    caatgatggtctttcctcctc 619
              |||||||||||||||||||||
Sbjct: 176603 caatgatggtctttcctcctc 176623
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>ref|XM_780107.1| PREDICTED: Strongylocentrotus purpuratus similar to transducin
           (beta)-like 3 (predicted) (LOC580026), mRNA
          Length = 1341

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 612 tcctcctcatctttatcacca 632
           |||||||||||||||||||||
Sbjct: 806 tcctcctcatctttatcacca 786
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>gb|AC129415.1| Homo sapiens 3 BAC RP11-382L10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110116

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 497   tccattatatgtttcaaaaaa 517
             |||||||||||||||||||||
Sbjct: 11847 tccattatatgtttcaaaaaa 11827
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>gb|AC152955.2| Mus musculus 6 BAC RP23-377G14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 157224

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 608    tctttcctcctcatctttatc 628
              |||||||||||||||||||||
Sbjct: 102388 tctttcctcctcatctttatc 102408
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>gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, complete sequence
          Length = 201383

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 599    caatgatggtctttcctcctc 619
              |||||||||||||||||||||
Sbjct: 189519 caatgatggtctttcctcctc 189499
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>gb|AC101831.7| Mus musculus chromosome 15, clone RP24-491D12, complete sequence
          Length = 129818

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   tcccattatgctcacagcaa 554
             ||||||||||||||||||||
Sbjct: 13170 tcccattatgctcacagcaa 13189
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>gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, complete sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 512   aaaaaatggatgcacaatttttat 535
             |||||||||| |||||||||||||
Sbjct: 38949 aaaaaatggaagcacaatttttat 38972
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>gb|AC113439.14| Mus musculus chromosome 10, clone RP23-193K15, complete sequence
          Length = 205857

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cagttcagaaactcagaggc 123
             ||||||||||||||||||||
Sbjct: 91738 cagttcagaaactcagaggc 91757
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>gb|AC146267.3| Pan troglodytes BAC clone CH251-55N11 from X, complete sequence
          Length = 172439

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   tgcacaatttttatcccatt 541
             ||||||||||||||||||||
Sbjct: 95335 tgcacaatttttatcccatt 95354
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 222     aaagtgaaaaatctgctgctataa 245
               |||| |||||||||||||||||||
Sbjct: 1539968 aaagggaaaaatctgctgctataa 1539991
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>gb|AC115028.17| Mus musculus chromosome 5, clone RP24-245G22, complete sequence
          Length = 188423

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 602   tgatggtctttcctcctcatcttt 625
             |||| |||||||||||||||||||
Sbjct: 97076 tgatagtctttcctcctcatcttt 97099
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 579      gaacacaacacagggaagcacaat 602
                ||||| ||||||||||||||||||
Sbjct: 35394638 gaacagaacacagggaagcacaat 35394661
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>gb|AC118211.10| Mus musculus chromosome 8, clone RP24-223O5, complete sequence
          Length = 192713

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    ttctgccccattctcgcacc 314
              ||||||||||||||||||||
Sbjct: 179178 ttctgccccattctcgcacc 179197
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>emb|Z47069.1|CEF36G3 Caenorhabditis elegans Cosmid F36G3, complete sequence
          Length = 22700

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   aaaattcaaaatattgaaac 53
            ||||||||||||||||||||
Sbjct: 1869 aaaattcaaaatattgaaac 1888
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>ref|XM_718578.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03518)
            partial mRNA
          Length = 4512

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 499  cattatatgtttcaaaaaat 518
            ||||||||||||||||||||
Sbjct: 3364 cattatatgtttcaaaaaat 3345
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>ref|XM_732295.1| Plasmodium chabaudi chabaudi hypothetical protein (PC109216.00.0)
           partial mRNA
          Length = 808

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 attatatgtttcaaaaaatg 519
           ||||||||||||||||||||
Sbjct: 730 attatatgtttcaaaaaatg 749
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>gb|AC110917.11| Mus musculus, clone RP23-155I20, complete sequence
          Length = 193005

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 512   aaaaaatggatgcacaatttttat 535
             |||||||||| |||||||||||||
Sbjct: 13542 aaaaaatggaagcacaatttttat 13519
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>emb|AL356057.12| Human DNA sequence from clone RP11-474L11 on chromosome 6 contains the
             5' end of the SUSP1 gene for SUMO-1-specific protease, the
             5' end of a novel gene, a pseudogene similar to part of
             FLJ14463 and a CpG island, complete sequence
          Length = 184909

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   tatgtttcaaaaaatggatg 523
             ||||||||||||||||||||
Sbjct: 49005 tatgtttcaaaaaatggatg 48986
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>gb|AC162364.6| Mus musculus chromosome 15, clone RP24-117M19, complete sequence
          Length = 164862

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   tcccattatgctcacagcaa 554
             ||||||||||||||||||||
Sbjct: 89221 tcccattatgctcacagcaa 89240
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>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence
          Length = 245991

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gtgaaaaatctgctgctata 244
             ||||||||||||||||||||
Sbjct: 73943 gtgaaaaatctgctgctata 73962
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>emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in linkage group 10,
             complete sequence
          Length = 97299

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 213   tcttcagcgaaagtgaaaaatctgctgc 240
             |||||||| ||||||||||||| |||||
Sbjct: 12899 tcttcagcaaaagtgaaaaatcagctgc 12872
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>emb|CR524483.7| Zebrafish DNA sequence from clone DKEY-151P21 in linkage group 15,
              complete sequence
          Length = 210342

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     aaatattatttgcagttcag 111
              ||||||||||||||||||||
Sbjct: 146875 aaatattatttgcagttcag 146894
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>gb|AC026702.6| Homo sapiens chromosome 5 clone CTC-575I10, complete sequence
          Length = 148737

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   aggaataggattcatctggg 348
             ||||||||||||||||||||
Sbjct: 40624 aggaataggattcatctggg 40605
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 579      gaacacaacacagggaagcacaat 602
                ||||| ||||||||||||||||||
Sbjct: 35484710 gaacagaacacagggaagcacaat 35484733
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>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
             sequence
          Length = 133846

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 579   gaacacaacacagggaagcacaat 602
             ||||| ||||||||||||||||||
Sbjct: 92988 gaacagaacacagggaagcacaat 92965
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>gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosome 8, complete sequence
          Length = 111845

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   ttctgccccattctcgcacc 314
             ||||||||||||||||||||
Sbjct: 66928 ttctgccccattctcgcacc 66947
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 441     gtttgaattaggacatcttg 460
               ||||||||||||||||||||
Sbjct: 2863934 gtttgaattaggacatcttg 2863953
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>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    aagtgaaaaatctgctgctataag 246
              |||| |||||||||||||||||||
Sbjct: 405402 aagtaaaaaatctgctgctataag 405379
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>emb|BX470255.18| Zebrafish DNA sequence from clone DKEY-76A14 in linkage group 1,
             complete sequence
          Length = 203708

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 512   aaaaaatggatgcacaatttttat 535
             |||||||| |||||||||||||||
Sbjct: 28604 aaaaaatgtatgcacaatttttat 28627
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>dbj|AP004250.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47K21, TM0260,
             complete sequence
          Length = 79947

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aattcaaaatattgaaactg 55
             ||||||||||||||||||||
Sbjct: 64132 aattcaaaatattgaaactg 64151


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,537,507
Number of Sequences: 3902068
Number of extensions: 6537507
Number of successful extensions: 125452
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125271
Number of HSP's gapped (non-prelim): 181
length of query: 699
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 676
effective length of database: 17,143,297,704
effective search space: 11588869247904
effective search space used: 11588869247904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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