ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25a22 |
|---|---|
| Clone Library Name | barley_pub |
>RL6_MESCR (P34091) 60S ribosomal protein L6 (YL16-like)| Length = 234 Score = 95.1 bits (235), Expect = 4e-20 Identities = 45/76 (59%), Positives = 55/76 (72%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLG 182 DKYF + + + KK EGE FE EK+ LP KKDDQKA+D L+KAI+ VP+LK YLG Sbjct: 159 DKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLG 218 Query: 181 ARFSLRDGDKPHEMTF 134 ARFSL+ G KPHE+ F Sbjct: 219 ARFSLKAGMKPHELVF 234
>RL6_PIG (Q2YGT9) 60S ribosomal protein L6| Length = 283 Score = 66.2 bits (160), Expect = 2e-11 Identities = 31/76 (40%), Positives = 52/76 (68%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLG 182 D YF + K + + EGE+F+TEKE + + + +K DQKA+D+++++ I AVP L+ YL Sbjct: 209 DAYFKKKKLRKPRHQEGEIFDTEKEKYE-ISEQRKVDQKAVDSQILRRIKAVPQLQGYLR 267 Query: 181 ARFSLRDGDKPHEMTF 134 + F+L +G PH++ F Sbjct: 268 SVFALTNGIYPHKLVF 283
>RL6_RAT (P21533) 60S ribosomal protein L6 (Neoplasm-related protein C140)| Length = 297 Score = 65.9 bits (159), Expect = 2e-11 Identities = 31/76 (40%), Positives = 51/76 (67%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLG 182 D YF + + + EGE+F+TEKE + + + +K DQKA+D++++ I AVP L+ YL Sbjct: 223 DAYFKKKPLRKPRHQEGEIFDTEKEKYE-ITEQRKADQKAVDSQILPKIKAVPQLQGYLR 281 Query: 181 ARFSLRDGDKPHEMTF 134 ++FSL +G PH++ F Sbjct: 282 SQFSLTNGMYPHKLVF 297
>RL6_MOUSE (P47911) 60S ribosomal protein L6 (TAX-responsive enhancer| element-binding protein 107) (TAXREB107) Length = 295 Score = 65.9 bits (159), Expect = 2e-11 Identities = 31/76 (40%), Positives = 51/76 (67%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLG 182 D YF + + + + EGE+F+TEKE + + + +K DQKA+D +++ I AVP L+ YL Sbjct: 221 DAYFKKKQLRKPRHQEGEIFDTEKEKYE-ITEQRKADQKAVDLQILPKIKAVPQLQGYLR 279 Query: 181 ARFSLRDGDKPHEMTF 134 ++FSL +G PH++ F Sbjct: 280 SQFSLTNGMYPHKLVF 295
>RL6_CHILA (Q6QMZ4) 60S ribosomal protein L6| Length = 287 Score = 65.5 bits (158), Expect = 3e-11 Identities = 31/76 (40%), Positives = 51/76 (67%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLG 182 D YF + K + + EGE+F+TEKE + + + +K DQKA+D++++ I AVP L+ YL Sbjct: 213 DAYFKKKKLRKPRHQEGEIFDTEKERYQ-ISEQRKVDQKAVDSQILPKIKAVPQLRGYLR 271 Query: 181 ARFSLRDGDKPHEMTF 134 + F+L +G PH++ F Sbjct: 272 SVFALTNGIYPHKLVF 287
>RL6_HUMAN (Q02878) 60S ribosomal protein L6 (TAX-responsive enhancer| element-binding protein 107) (TAXREB107) (Neoplasm-related protein C140) Length = 287 Score = 64.7 bits (156), Expect = 5e-11 Identities = 30/76 (39%), Positives = 51/76 (67%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLG 182 D YF + K + + EGE+F+TEKE + + + +K DQKA+D++++ I A+P L+ YL Sbjct: 213 DAYFKKKKLRKPRHQEGEIFDTEKEKYE-ITEQRKIDQKAVDSQILPKIKAIPQLQGYLR 271 Query: 181 ARFSLRDGDKPHEMTF 134 + F+L +G PH++ F Sbjct: 272 SVFALTNGIYPHKLVF 287
>RL6_BOVIN (Q58DQ3) 60S ribosomal protein L6| Length = 286 Score = 64.7 bits (156), Expect = 5e-11 Identities = 30/76 (39%), Positives = 52/76 (68%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLG 182 D YF + K + + EGE+F+TE+E + + + +K DQKA+D+++++ I AVP L+ YL Sbjct: 212 DTYFKKKKLRKPRHQEGEIFDTEREKYE-ITEQRKVDQKAVDSQILRRIKAVPQLQGYLR 270 Query: 181 ARFSLRDGDKPHEMTF 134 + F+L +G PH++ F Sbjct: 271 SVFALTNGIYPHKVVF 286
>RL6_SCHPO (P79071) 60S ribosomal protein L6| Length = 194 Score = 64.3 bits (155), Expect = 7e-11 Identities = 33/74 (44%), Positives = 47/74 (63%) Frame = -2 Query: 355 YFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGAR 176 YFA+ K++ K + E F E LP + DQKA+DA+L+ AI A+P++K YL A Sbjct: 122 YFAKQKRSGPVKKD-EAFFAENAPKNALPAERIADQKAVDAKLLPAIKAIPNMKEYLAAS 180 Query: 175 FSLRDGDKPHEMTF 134 F+L +GD+PH M F Sbjct: 181 FALSNGDRPHLMKF 194
>RL6B_YEAST (P05739) 60S ribosomal protein L6-B (L17) (YL16) (RP18)| Length = 175 Score = 62.8 bits (151), Expect = 2e-10 Identities = 31/75 (41%), Positives = 46/75 (61%) Frame = -2 Query: 358 KYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGA 179 +YFA++K + +K E LF ++ TK + + +DQK +D L+ I P LK YL A Sbjct: 103 EYFAKEKLTKKEKKEANLFPEQQ--TKEIKTERVEDQKVVDKALLAEIKKTPLLKQYLSA 160 Query: 178 RFSLRDGDKPHEMTF 134 FSL++GDKPH + F Sbjct: 161 SFSLKNGDKPHLLKF 175
>RL6A_YEAST (Q02326) 60S ribosomal protein L6-A (L17) (YL16) (RP18)| Length = 175 Score = 61.6 bits (148), Expect = 4e-10 Identities = 31/75 (41%), Positives = 45/75 (60%) Frame = -2 Query: 358 KYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGA 179 +YFA++K + +K E LF ++ K + + +DQK +D LI I P LK YL A Sbjct: 103 EYFAKEKLTKKEKKEANLFPEQQN--KEIKAERVEDQKVVDKALIAEIKKTPLLKQYLSA 160 Query: 178 RFSLRDGDKPHEMTF 134 FSL++GDKPH + F Sbjct: 161 SFSLKNGDKPHMLKF 175
>RL6_CAEEL (P47991) 60S ribosomal protein L6| Length = 217 Score = 46.2 bits (108), Expect = 2e-05 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLK---N 191 D+YF R K+ A+KT +F + K + + +K D K +DA ++ AI P+ K Sbjct: 142 DEYFKR--KSTAQKTGKNIFASGK-TEYTVSEQRKKDIKTVDAPILAAIKKHPEHKFLFG 198 Query: 190 YLGARFSLRDGDKPHEMTF 134 YLG RFSL PH+M F Sbjct: 199 YLGTRFSLGKNQYPHKMQF 217
>CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)| Length = 348 Score = 32.7 bits (73), Expect = 0.22 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKA 218 DK + K A ++EGE TEK++ K D KK AI+ + +KA Sbjct: 192 DKKDSNKGKDSATESEGEKGGTEKDSKKGKKDSKKGKDSAIELQAVKA 239
>G6PI_MYCHJ (Q4A9F3) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 429 Score = 31.2 bits (69), Expect = 0.65 Identities = 17/67 (25%), Positives = 35/67 (52%) Frame = +2 Query: 56 EVK*QGTNFSNKLGKTHSKRRTSTNLEGHLMGLVTVPEREPGTKIVLKVRDSIDSLDQLS 235 E+K F N++ + H++ + + + +G PE + + ++R +++L Q S Sbjct: 10 EIKLDYQGFQNQINEFHNRINDKNSPDINFLGWNNFPEVAINPQEIARMRKIVENLHQNS 69 Query: 236 INGLLVI 256 IN L+VI Sbjct: 70 INVLVVI 76
>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 569 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = +1 Query: 34 FSLQQXIRSQVTGYKFQQQARQNTFKTQDFYQLRRSSHGACHRP*ERTG--HQDSS 195 FS Q R+ G + + + + + DF++ RRS A RP E TG H+D + Sbjct: 22 FSRVQSQRTARPGQRGKDEDEEQLSRELDFFRTRRSVPAAAERPAEETGDAHRDET 77
>G6PI_MYCH7 (Q4A7J2) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 429 Score = 30.8 bits (68), Expect = 0.85 Identities = 17/67 (25%), Positives = 34/67 (50%) Frame = +2 Query: 56 EVK*QGTNFSNKLGKTHSKRRTSTNLEGHLMGLVTVPEREPGTKIVLKVRDSIDSLDQLS 235 E+K F N++ + H + + + + +G PE + + ++R +++L Q S Sbjct: 10 EIKLDYQGFQNQINEFHKRINDKNSPDINFLGWNNFPEVAINPQEIARMRKIVENLHQNS 69 Query: 236 INGLLVI 256 IN L+VI Sbjct: 70 INVLVVI 76
>CYL1_BOVIN (P35662) Cylicin-1 (Cylicin I) (Multiple-band polypeptide I)| Length = 667 Score = 30.8 bits (68), Expect = 0.85 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 10/74 (13%) Frame = -2 Query: 343 DKKARAKK----------TEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLK 194 DKK AKK +EG+ +++K++ K+ D KKDDQK + ++ + D + Sbjct: 454 DKKKDAKKDAVSTDADSESEGDAKKSKKDSKKDKKDLKKDDQKKPAMKSKESTETESDWE 513 Query: 193 NYLGARFSLRDGDK 152 + R S +D K Sbjct: 514 SKKVKRDSKKDTKK 527
>RPN2_CANGA (Q6FIP2) 26S proteasome regulatory subunit RPN2| Length = 941 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = -2 Query: 337 KARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAE 230 KARAKKT+ E E + K D KK++ K DA+ Sbjct: 808 KARAKKTKKEKDTNEDDKKKKEKDLKKEETKKDDAK 843
>YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4 intergenic| region Length = 738 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/40 (45%), Positives = 21/40 (52%) Frame = -2 Query: 349 ARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAE 230 A K KKTE L E E K + D KKDDQK+ +E Sbjct: 248 ATPKPKAVKKTESPL-ENVAELKKEISDIKKDDQKSEASE 286
>G6PI_MYCH2 (Q600A8) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 429 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/67 (25%), Positives = 34/67 (50%) Frame = +2 Query: 56 EVK*QGTNFSNKLGKTHSKRRTSTNLEGHLMGLVTVPEREPGTKIVLKVRDSIDSLDQLS 235 E+K +F N++ + H + + + +G PE + + ++R +++L Q S Sbjct: 10 EIKLDYQDFQNQINEFHKRINDKNSPDIIFLGWNNFPEVAINPQEIARMRKIVENLHQNS 69 Query: 236 INGLLVI 256 IN L+VI Sbjct: 70 INVLVVI 76
>EX7S_HELPJ (Q9ZJD7) Probable exodeoxyribonuclease VII small subunit (EC| 3.1.11.6) (Exonuclease VII small subunit) Length = 86 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 Query: 316 EGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDG 158 + ELFETEK KN + K +K+ + E + +++ V D N SL+DG Sbjct: 2 QDELFETEKAPQKNAKNAKNAPKKSFE-EHVHSLERVIDRLN--DPNLSLKDG 51
>SYF2_DEBHA (Q6BVE0) Pre-mRNA-splicing factor SYF2| Length = 231 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Frame = -2 Query: 346 RDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAEL----IKAIDAVPDLKNYLGA 179 R K+ K + ELF+ K+ ++KK +QK ++AEL + +I+ D + Sbjct: 40 RKKQESEKLNKQELFQDYKQQKLKSIEYKKIEQKKLNAELEQEKLDSIEKGEDFERKQNW 99 Query: 178 RFSLRDGDKPHEMTF*VGRS 119 +++ D +K + T GR+ Sbjct: 100 DWTIEDCEKWEKKTKQKGRN 119
>ZCHC6_MOUSE (Q5BLK4) Zinc finger CCHC domain-containing protein 6| Length = 1491 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -3 Query: 360 TSTLLGTRRPGQRRLKGSCLRLRRRQPRTCLTSK 259 T LLG ++ + RLK C+ +R+PR C T+K Sbjct: 211 TKELLGLQQ-AEERLKRDCIDRLKRRPRNCPTAK 243
>SYI_CORJK (Q4JW85) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1092 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = -2 Query: 289 EATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDK 152 E + +L DF K + DAEL+ A+DAV + + A SLR K Sbjct: 836 ERSVHLADFPKSENLPADAELVTAMDAVRAVSS---ATSSLRKAHK 878
>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded| at second protein) Length = 1693 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 322 KTEGELFETEKEATKNL-PDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPH 146 + +G+L + ++ NL PD + +AID I+ + VP + L R LR + P Sbjct: 1263 QNQGKLAKQQQSGANNLQPDIEVHTLEAIDPRSIRIVFTVPQVYVNLHGRVELRYSNGPS 1322 Query: 145 EMT 137 T Sbjct: 1323 NDT 1325
>Y1080_METJA (Q58480) Hypothetical protein MJ1080| Length = 135 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 187 LGARFSLRDGDKPHEMTF*VGRSPAF*MCFA*LVAEICTLL 65 +G + +RDG P E + +G P + +A L A+ C LL Sbjct: 51 MGVIWHIRDGGNPLESSSMIGGMPGYLPLYAYLCAKFCDLL 91
>NOF_DROME (P16320) 120.7 kDa protein in NOF-FB transposable element| Length = 1056 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +2 Query: 125 TNLEGHLMGLVTVPEREPGTKIVLKVRDSIDSLDQLSINGL 247 T+ E + G + ER+PG ++L + ++D+ Q+ NGL Sbjct: 935 TDGECKICGGQQILERQPGPHVILDIEFAMDAFHQIHHNGL 975
>ENPL_CATRO (P35016) Endoplasmin homolog precursor (GRP94 homolog)| Length = 817 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -2 Query: 343 DKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAV 206 +K + EGE ETEKE + P KK + + EL+ + A+ Sbjct: 306 NKSESSSSEEGEEEETEKEEDEKKPKTKKVKETTYEWELLNDMKAI 351
>TOPB1_HUMAN (Q92547) DNA topoisomerase 2-binding protein 1 (DNA topoisomerase| II-binding protein 1) (DNA topoisomerase IIbeta-binding protein 1) (TopBP1) Length = 1522 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +1 Query: 286 PPSQSQTAPLQSSLPWPSCP*Q 351 P ++ + A L S+L WPSCP Q Sbjct: 1148 PTAREERARLASNLQWPSCPTQ 1169
>BIR1_SCHPO (O14064) Protein bir1 (Chromosome segregation protein cut17)| Length = 997 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/48 (29%), Positives = 27/48 (56%) Frame = -2 Query: 295 EKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDK 152 EKEA L + +K ++K + + + DA PD + +R S+++G + Sbjct: 779 EKEANHELENIEKIEEKLTEVDKVSLSDAFPD-QEIKNSRTSVQNGTR 825
>RPOB_AMYMD (Q9L637) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1167 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%) Frame = +1 Query: 103 TFKTQDFYQLRRSSHGAC--HRP 165 T K+ Y+ RRS+HG C HRP Sbjct: 657 TRKSYSLYKFRRSNHGTCFNHRP 679
>GR1_ARATH (Q9ZRT1) Protein gamma response 1 (Protein gamma response I)| Length = 589 Score = 27.7 bits (60), Expect = 7.2 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 9/83 (10%) Frame = +2 Query: 56 EVK*QGTNFSNKLGKTHSKRRTSTNLEGHLMGLVTVPEREPGTKIVLKVRD--------- 208 ++K + +LGKT S T+L+G++ L + + +K+V RD Sbjct: 89 QIKSDKEKLAEELGKTASMPLRLTSLQGYIDHL--KKKMKSRSKMVGDARDLYYRLVELL 146 Query: 209 SIDSLDQLSINGLLVILFEVRQV 277 + LD+LS +G+ +I+ EV+ + Sbjct: 147 QVKGLDELSEDGINMIVSEVKSL 169
>Y181_LISMF (Q724P3) UPF0213 protein LMOf2365_0181| Length = 89 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/30 (53%), Positives = 18/30 (60%) Frame = -2 Query: 310 ELFETEKEATKNLPDFKKDDQKAIDAELIK 221 E FET EATK FKK +K DA LI+ Sbjct: 55 EKFETRSEATKAEAAFKKLSRKNKDAYLIQ 84
>Y166_LISMO (Q8YAG0) UPF0213 protein lmo0166| Length = 90 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/30 (53%), Positives = 18/30 (60%) Frame = -2 Query: 310 ELFETEKEATKNLPDFKKDDQKAIDAELIK 221 E FET EATK FKK +K DA LI+ Sbjct: 55 EKFETRSEATKAEAAFKKLSRKNKDAYLIQ 84
>EX7S_HELPY (O26016) Probable exodeoxyribonuclease VII small subunit (EC| 3.1.11.6) (Exonuclease VII small subunit) Length = 86 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -2 Query: 316 EGELFETEKEATKNLPDFKKDDQKAIDA---ELIKAIDAVPDLKNYLGARFSLRDG 158 + ELFETEK KN + K +K+ + L +AID + D SL+DG Sbjct: 2 QDELFETEKIPPKNTKNTKNAPKKSFEEHVHSLERAIDRLND------PNLSLKDG 51
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase xnp-1) (X-linked nuclear protein 1) Length = 1359 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Frame = -2 Query: 343 DKKARAKKTEGELFETEKEATKNLPDF----KKDDQKAIDAELIKAIDAVPDLKNYLGAR 176 D+ + KK G E +K A + F +D++ D + D + K G Sbjct: 854 DEGSSKKKKNGNKPEIKKTAPQKKRKFLNSDDEDEEDGEDTAMAILQDGIRQSKRLAGEE 913 Query: 175 FSLRDGDKPHEMT 137 LRD D P E T Sbjct: 914 ADLRDTDTPPEYT 926
>OBP_VZVD (P09299) Replication origin binding protein (OBP)| Length = 835 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +3 Query: 6 CKAXNDSLNLLTSTXHTKSSNRVQISATS*AKHI 107 C+ NLL S H+ S R +I+A + A+H+ Sbjct: 761 CRTYRQLYNLLMSQRHSFSQQRYKITAPAWARHV 794
>HMDH_METJA (Q58116) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC| 1.1.1.34) (HMG-CoA reductase) Length = 405 Score = 27.3 bits (59), Expect = 9.4 Identities = 21/62 (33%), Positives = 25/62 (40%) Frame = -2 Query: 331 RAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDK 152 R K E+F TEKE K L + AI V LKNY+G+ S G Sbjct: 246 RGKSIVAEVFLTEKEVNKYLKTTSQ------------AIAEVNRLKNYIGSAISNSMGFN 293 Query: 151 PH 146 H Sbjct: 294 AH 295
>Y1518_METJA (Q58913) Hypothetical protein MJ1518| Length = 374 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -2 Query: 325 KKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAV 206 K E ++ ET +NLP K D + D ELIK I + Sbjct: 284 KVKEYDIIETLLNIRENLPKSSKIDVRYFDKELIKIIRGI 323
>PCNA2_SULTO (Q975M2) DNA polymerase sliding clamp B (Proliferating cell nuclear| antigen homolog B) (PCNA B) Length = 248 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +2 Query: 92 LGKTHSKRRTSTNLEGHLMGLVTVPEREPGTKIVLKVRDSIDSLDQLS 235 LGK SK T T E VTV + + GT+ + ++ S+DQL+ Sbjct: 79 LGKAKSKSATVTLEETEAGLKVTVRDEKTGTRSNIYIKGEKTSIDQLT 126
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAID-AVPDLKNYL 185 D YF+ ++ R KT + ET+ + T+ P +D+ D L + I VP L + Sbjct: 275 DAYFSAAEEDRDSKTNAQTAETDADDTEFEPQAGEDEDNLSDDSLDEIISLQVPTLPTTV 334 Query: 184 GARFSLRDG 158 + ++ G Sbjct: 335 TGQSTIGTG 343
>YITM_BACSU (O06748) Hypothetical protein yitM precursor| Length = 194 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -2 Query: 322 KTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAID 212 K G++ E + EA K + KDD + AEL+ +D Sbjct: 110 KKAGQIVEEKVEAAKEIAA-SKDDTSRVQAELVNTVD 145
>DRL36_ARATH (Q8VZC7) Probable disease resistance protein At5g45510| Length = 1202 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -2 Query: 361 DKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAID 212 +KY K+A KK E + + EKEA + L + ++K +D KA D Sbjct: 126 EKYLLEKKEAVVKKLEDDKKKKEKEAAEKL----EAEKKLVDPAAKKAKD 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,343,124 Number of Sequences: 219361 Number of extensions: 818624 Number of successful extensions: 2420 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 2366 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2411 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
