Clone Name | rbasd24l12 |
---|---|
Clone Library Name | barley_pub |
>gb|AY754697.1| Zea mays immunophilin mRNA, complete cds Length = 761 Score = 240 bits (121), Expect = 3e-60 Identities = 216/248 (87%) Strand = Plus / Minus Query: 140 gagttnggttgaattccccaggctggagagccaccagatccataagcgtagtctggggtg 199 ||||| |||||||||||||||||||| | || || | ||||||||| || || || ||| Sbjct: 411 gagtttggttgaattccccaggctgggaacccgccggctccataagcataatcaggcgtg 352 Query: 200 cacttaagacgggcgacttcacccaattgcatgtccataactccctcatcccatcctttg 259 |||| | ||| || |||||||||| ||||||| |||||||||||| |||||||||||| Sbjct: 351 cactggatacgagcaacttcacccacttgcatggtcataactccctcgtcccatcctttg 292 Query: 260 atcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttggtactc 319 |||||||||||| | |||||| ||||| |||||||||||||||||| |||||||| ||| Sbjct: 291 atcactgaaccctgaccaatgctgaaactgaatggctgctgcccagggtccttggtgctc 232 Query: 320 caaaacttcttggacagatcaccgtccttgccgtagccggtgcagtggacggtgaccttc 379 ||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 231 caaaatttcttggacagatcacgatccttcccgtagccggtgcagtgaacggtgaccttc 172 Query: 380 tggccctt 387 |||||||| Sbjct: 171 tggccctt 164
>gb|AY103897.1| Zea mays PCO108516 mRNA sequence Length = 797 Score = 240 bits (121), Expect = 3e-60 Identities = 216/248 (87%) Strand = Plus / Minus Query: 140 gagttnggttgaattccccaggctggagagccaccagatccataagcgtagtctggggtg 199 ||||| |||||||||||||||||||| | || || | ||||||||| || || || ||| Sbjct: 411 gagtttggttgaattccccaggctgggaacccgccggctccataagcataatcaggcgtg 352 Query: 200 cacttaagacgggcgacttcacccaattgcatgtccataactccctcatcccatcctttg 259 |||| | ||| || |||||||||| ||||||| |||||||||||| |||||||||||| Sbjct: 351 cactggatacgagcaacttcacccacttgcatggtcataactccctcgtcccatcctttg 292 Query: 260 atcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttggtactc 319 |||||||||||| | |||||| ||||| |||||||||||||||||| |||||||| ||| Sbjct: 291 atcactgaaccctgaccaatgctgaaactgaatggctgctgcccagggtccttggtgctc 232 Query: 320 caaaacttcttggacagatcaccgtccttgccgtagccggtgcagtggacggtgaccttc 379 ||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 231 caaaatttcttggacagatcacgatccttcccgtagccggtgcagtgaacggtgaccttc 172 Query: 380 tggccctt 387 |||||||| Sbjct: 171 tggccctt 164
>ref|XM_467909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 620 Score = 208 bits (105), Expect = 1e-50 Identities = 245/292 (83%) Strand = Plus / Minus Query: 106 ggcgctaagaacttcgatctcgaatatcagctcggagttnggttgaattccccaggctgg 165 |||||||||||| || |||||||| | |||| | ||||| ||| ||||||||||||| || Sbjct: 434 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 375 Query: 166 agagccaccagatccataagcgtagtctggggtgcacttaagacgggcgacttcacccaa 225 | | |||| || |||||| || || || |||||||||| || ||| || |||||||||| Sbjct: 374 aaacccactagctccatacgcataatccggggtgcactgaatacgagcaacttcacccac 315 Query: 226 ttgcatgtccataactccctcatcccatcctttgatcactgaacccaggccaatgttgaa 285 ||||||| |||||||||||| ||||||||||||||||| |||||| |||| || ||||| Sbjct: 314 ttgcatggtcataactccctcgtcccatcctttgatcaccgaaccctggcctatattgaa 255 Query: 286 agcgaatggctgctgcccaggatccttggtactccaaaacttcttggacagatcaccgtc 345 | |||||||| ||| || | ||||| || |||||||||||||| | |||||| || Sbjct: 254 actgaatggctcctggcctgcgtcctttgtgctccaaaacttcttagcgagatcattatc 195 Query: 346 cttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 tttcccgaagccggtgcagtggacggtgaccttctggcccttgacgggcttg 143
>ref|XM_506987.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1175_B01.15 mRNA Length = 630 Score = 208 bits (105), Expect = 1e-50 Identities = 245/292 (83%) Strand = Plus / Minus Query: 106 ggcgctaagaacttcgatctcgaatatcagctcggagttnggttgaattccccaggctgg 165 |||||||||||| || |||||||| | |||| | ||||| ||| ||||||||||||| || Sbjct: 433 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 374 Query: 166 agagccaccagatccataagcgtagtctggggtgcacttaagacgggcgacttcacccaa 225 | | |||| || |||||| || || || |||||||||| || ||| || |||||||||| Sbjct: 373 aaacccactagctccatacgcataatccggggtgcactgaatacgagcaacttcacccac 314 Query: 226 ttgcatgtccataactccctcatcccatcctttgatcactgaacccaggccaatgttgaa 285 ||||||| |||||||||||| ||||||||||||||||| |||||| |||| || ||||| Sbjct: 313 ttgcatggtcataactccctcgtcccatcctttgatcaccgaaccctggcctatattgaa 254 Query: 286 agcgaatggctgctgcccaggatccttggtactccaaaacttcttggacagatcaccgtc 345 | |||||||| ||| || | ||||| || |||||||||||||| | |||||| || Sbjct: 253 actgaatggctcctggcctgcgtcctttgtgctccaaaacttcttagcgagatcattatc 194 Query: 346 cttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tttcccgaagccggtgcagtggacggtgaccttctggcccttgacgggcttg 142
>dbj|AK121481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K16, full insert sequence Length = 620 Score = 208 bits (105), Expect = 1e-50 Identities = 245/292 (83%) Strand = Plus / Minus Query: 106 ggcgctaagaacttcgatctcgaatatcagctcggagttnggttgaattccccaggctgg 165 |||||||||||| || |||||||| | |||| | ||||| ||| ||||||||||||| || Sbjct: 434 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 375 Query: 166 agagccaccagatccataagcgtagtctggggtgcacttaagacgggcgacttcacccaa 225 | | |||| || |||||| || || || |||||||||| || ||| || |||||||||| Sbjct: 374 aaacccactagctccatacgcataatccggggtgcactgaatacgagcaacttcacccac 315 Query: 226 ttgcatgtccataactccctcatcccatcctttgatcactgaacccaggccaatgttgaa 285 ||||||| |||||||||||| ||||||||||||||||| |||||| |||| || ||||| Sbjct: 314 ttgcatggtcataactccctcgtcccatcctttgatcaccgaaccctggcctatattgaa 255 Query: 286 agcgaatggctgctgcccaggatccttggtactccaaaacttcttggacagatcaccgtc 345 | |||||||| ||| || | ||||| || |||||||||||||| | |||||| || Sbjct: 254 actgaatggctcctggcctgcgtcctttgtgctccaaaacttcttagcgagatcattatc 195 Query: 346 cttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 tttcccgaagccggtgcagtggacggtgaccttctggcccttgacgggcttg 143
>dbj|AK063850.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-C11, full insert sequence Length = 630 Score = 208 bits (105), Expect = 1e-50 Identities = 245/292 (83%) Strand = Plus / Minus Query: 106 ggcgctaagaacttcgatctcgaatatcagctcggagttnggttgaattccccaggctgg 165 |||||||||||| || |||||||| | |||| | ||||| ||| ||||||||||||| || Sbjct: 433 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 374 Query: 166 agagccaccagatccataagcgtagtctggggtgcacttaagacgggcgacttcacccaa 225 | | |||| || |||||| || || || |||||||||| || ||| || |||||||||| Sbjct: 373 aaacccactagctccatacgcataatccggggtgcactgaatacgagcaacttcacccac 314 Query: 226 ttgcatgtccataactccctcatcccatcctttgatcactgaacccaggccaatgttgaa 285 ||||||| |||||||||||| ||||||||||||||||| |||||| |||| || ||||| Sbjct: 313 ttgcatggtcataactccctcgtcccatcctttgatcaccgaaccctggcctatattgaa 254 Query: 286 agcgaatggctgctgcccaggatccttggtactccaaaacttcttggacagatcaccgtc 345 | |||||||| ||| || | ||||| || |||||||||||||| | |||||| || Sbjct: 253 actgaatggctcctggcctgcgtcctttgtgctccaaaacttcttagcgagatcattatc 194 Query: 346 cttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tttcccgaagccggtgcagtggacggtgaccttctggcccttgacgggcttg 142
>gb|BT016383.1| Zea mays clone Contig216 mRNA sequence Length = 995 Score = 200 bits (101), Expect = 2e-48 Identities = 149/165 (90%) Strand = Plus / Minus Query: 215 acttcacccaattgcatgtccataactccctcatcccatcctttgatcactgaacccagg 274 |||||||||| ||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct: 338 acttcacccacttgcatggtcataactccctcgtcccatcctttgatcactgaaccctga 279 Query: 275 ccaatgttgaaagcgaatggctgctgcccaggatccttggtactccaaaacttcttggac 334 |||||| ||||| |||||||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 278 ccaatgctgaaactgaatggctgctgcccagggtccttggtgctccaaaatttcttggac 219 Query: 335 agatcaccgtccttgccgtagccggtgcagtggacggtgaccttc 379 ||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 218 agatcacgatccttcccgtagccggtgcagtgaacggtgaccttc 174 Score = 46.1 bits (23), Expect = 0.086 Identities = 25/26 (96%) Strand = Plus / Minus Query: 140 gagttnggttgaattccccaggctgg 165 ||||| |||||||||||||||||||| Sbjct: 677 gagtttggttgaattccccaggctgg 652
>gb|U96925.1|VFU96925 Vicia faba immunophilin (FKBP12) mRNA, complete cds Length = 574 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Minus Query: 245 tcatcccatcctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgccca 304 ||||||||||||||||| || ||||| |||| || ||||||| |||||| | ||| ||| Sbjct: 221 tcatcccatcctttgatgacagaaccttggccgattttgaaagtgaatggattctggcca 162 Query: 305 ggatccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcag 364 |||||||| || ||||| ||||||| || || ||||||| || ||||| ||||||||| Sbjct: 161 ggatccttcgtgctccagaacttctgagaaaggtcaccgtttttaccgtaaccggtgcag 102 Query: 365 tggacggtgaccttctggcc 384 || |||||||| |||||||| Sbjct: 101 tgaacggtgacgttctggcc 82
>dbj|AK100511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099N19, full insert sequence Length = 1896 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 307 atccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtg 366 |||||| || |||||||||||||| | |||||| || || ||| ||||||||||||| Sbjct: 230 atcctttgtgctccaaaacttcttagcgagatcattatctttcccgaagccggtgcagtg 171 Query: 367 gacggtgaccttctggcccttgacgggcttg 397 ||||||||||||||||||||||||||||||| Sbjct: 170 gacggtgaccttctggcccttgacgggcttg 140
>gb|DQ428233.1| Sorghum propinquum locus PRC0268 genomic sequence Length = 798 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 652 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 593 Query: 314 gt 315 || Sbjct: 592 gt 591 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 110 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 63
>gb|DQ428232.1| Sorghum bicolor voucher PI585454 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428231.1| Sorghum bicolor voucher PI267539 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428230.1| Sorghum bicolor voucher PI267408 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428229.1| Sorghum bicolor voucher PI221607 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428228.1| Sorghum bicolor voucher PI152702 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428227.1| Sorghum bicolor voucher NSL92371 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428226.1| Sorghum bicolor voucher NSL87902 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428225.1| Sorghum bicolor voucher NSL87666 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428224.1| Sorghum bicolor voucher NSL77217 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428223.1| Sorghum bicolor voucher NSL77034 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428222.1| Sorghum bicolor voucher NSL56174 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428221.1| Sorghum bicolor voucher NSL56003 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428220.1| Sorghum bicolor voucher NSL55243 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428219.1| Sorghum bicolor voucher NSL51365 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428218.1| Sorghum bicolor voucher NSL51030 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>gb|DQ428217.1| Sorghum bicolor voucher NSL50875 locus PRC0268 genomic sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596 Query: 314 gt 315 || Sbjct: 595 gt 594 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 350 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttg 66
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 354 agccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32038147 agccggtgcagtggacggtgaccttctggcccttgacgggcttg 32038190 Score = 61.9 bits (31), Expect = 1e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 106 ggcgctaagaacttcgatctcgaatatcagctcggagttnggttgaattccccaggctgg 165 |||||||||||| || |||||||| | |||| | ||||| ||| ||||||||||||| || Sbjct: 32036451 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 32036510 Query: 166 agagccaccagatccataagcgtagtctggggtgcact 203 | | |||| || |||||| || || || |||||||||| Sbjct: 32036511 aaacccactagctccatacgcataatccggggtgcact 32036548 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 215 acttcacccaattgcatgtccataactccctcatcccatcct 256 |||||||||| ||||||| |||||||||||| ||||||||| Sbjct: 32036880 acttcacccacttgcatggtcataactccctcgtcccatcct 32036921
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 354 agccggtgcagtggacggtgaccttctggcccttgacgggcttg 397 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58522 agccggtgcagtggacggtgaccttctggcccttgacgggcttg 58565 Score = 61.9 bits (31), Expect = 1e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 106 ggcgctaagaacttcgatctcgaatatcagctcggagttnggttgaattccccaggctgg 165 |||||||||||| || |||||||| | |||| | ||||| ||| ||||||||||||| || Sbjct: 56826 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 56885 Query: 166 agagccaccagatccataagcgtagtctggggtgcact 203 | | |||| || |||||| || || || |||||||||| Sbjct: 56886 aaacccactagctccatacgcataatccggggtgcact 56923 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 215 acttcacccaattgcatgtccataactccctcatcccatcct 256 |||||||||| ||||||| |||||||||||| ||||||||| Sbjct: 57255 acttcacccacttgcatggtcataactccctcgtcccatcct 57296
>gb|AY490245.1| Lycopersicon esculentum CONSTANS interacting protein 3 (CIP3) mRNA, complete cds Length = 617 Score = 85.7 bits (43), Expect = 1e-13 Identities = 153/190 (80%) Strand = Plus / Minus Query: 140 gagttnggttgaattccccaggctggagagccaccagatccataagcgtagtctggggtg 199 ||||| || ||||| ||||| |||||| | ||||||| |||||||| || || |||||| Sbjct: 314 gagttgggctgaataccccatgctggaaatccaccagcaccataagcataatcaggggtg 255 Query: 200 cacttaagacgggcgacttcacccaattgcatgtccataactccctcatcccatcctttg 259 ||| | | || || ||||| |||||||||||| ||| ||||| ||||||||||||||| Sbjct: 254 cacgttaatcgagcaacttctcccaattgcatgcccagtactccttcatcccatcctttg 195 Query: 260 atcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttggtactc 319 || ||| || |||| || ||||||| ||| |||||||| || |||||||| || ||| Sbjct: 194 ataactttgccttggccgatcttgaaagagaaaggctgctggcctggatccttagtgctc 135 Query: 320 caaaacttct 329 || ||||||| Sbjct: 134 cagaacttct 125
>ref|NM_125831.2| Arabidopsis thaliana FKBP12; FK506 binding / peptidyl-prolyl cis-trans isomerase AT5G64350 (FKBP12) mRNA, complete cds Length = 632 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 308 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 367 ||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| ||| Sbjct: 212 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 153 Query: 368 acggtgac 375 |||||||| Sbjct: 152 acggtgac 145 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 ataactccctcatcccatcctttgatcac 264 ||||| || |||||||||||||||||||| Sbjct: 284 ataacgccttcatcccatcctttgatcac 256
>gb|AY081564.1| Arabidopsis thaliana immunophilin (At5g64350) mRNA, complete cds Length = 510 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 308 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 367 ||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| ||| Sbjct: 131 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 72 Query: 368 acggtgac 375 |||||||| Sbjct: 71 acggtgac 64 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 ataactccctcatcccatcctttgatcac 264 ||||| || |||||||||||||||||||| Sbjct: 203 ataacgccttcatcccatcctttgatcac 175
>gb|AY059928.1| Arabidopsis thaliana immunophilin (At5g64350; MSJ1.19) mRNA, complete cds Length = 590 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 308 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 367 ||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| ||| Sbjct: 189 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 130 Query: 368 acggtgac 375 |||||||| Sbjct: 129 acggtgac 122 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 ataactccctcatcccatcctttgatcac 264 ||||| || |||||||||||||||||||| Sbjct: 261 ataacgccttcatcccatcctttgatcac 233
>gb|U96924.1|ATU96924 Arabidopsis thaliana immunophilin (FKBP12) mRNA, complete cds Length = 617 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 308 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 367 ||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| ||| Sbjct: 166 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 107 Query: 368 acggtgac 375 |||||||| Sbjct: 106 acggtgac 99 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 ataactccctcatcccatcctttgatcac 264 ||||| || |||||||||||||||||||| Sbjct: 238 ataacgccttcatcccatcctttgatcac 210
>gb|AY084289.1| Arabidopsis thaliana clone 10243 mRNA, complete sequence Length = 582 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 308 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 367 ||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| ||| Sbjct: 212 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 153 Query: 368 acggtgac 375 |||||||| Sbjct: 152 acggtgac 145 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 ataactccctcatcccatcctttgatcac 264 ||||| || |||||||||||||||||||| Sbjct: 284 ataacgccttcatcccatcctttgatcac 256
>emb|AJ495769.1|HVU495769 Hordeum vulgare mRNA for putative immunophilin Length = 835 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 tccctcatcccatcctttgatcact 265 ||||| ||||||||||||||||||| Sbjct: 367 tccctgatcccatcctttgatcact 343
>gb|DQ271487.1| Mustela vison clone IX2M19 microsatellite sequence Length = 852 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ttgcatgtccataactccctc 246 ||||||||||||||||||||| Sbjct: 299 ttgcatgtccataactccctc 319
>gb|AF165999.1|AF165999 Drosophila melanogaster sodium-dependent excitatory amino acid transporter 1 mRNA, complete cds Length = 2704 Score = 42.1 bits (21), Expect = 1.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 171 caccagatccataagcgtagtctggggtg 199 |||||||||||||||||| |||||||||| Sbjct: 564 caccagatccataagcgt-gtctggggtg 537
>gb|M92297.2|STMBMANASE Streptomyces lividans mannanase (manA) gene, complete cds Length = 1881 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 ccgtccttgccgtagccggtg 361 ||||||||||||||||||||| Sbjct: 617 ccgtccttgccgtagccggtg 597
>dbj|AP007284.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT23F02, TM0183, complete sequence Length = 70173 Score = 42.1 bits (21), Expect = 1.3 Identities = 60/73 (82%) Strand = Plus / Minus Query: 254 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 313 |||||||| || ||||| |||| || ||||||| ||| || | ||| ||||||||||| Sbjct: 47727 cctttgataacagaaccttggccgattttgaaagtgaaaggtttctggccaggatccttt 47668 Query: 314 gtactccaaaact 326 || |||||||||| Sbjct: 47667 gtgctccaaaact 47655
>dbj|AB027469.1| Drosophila melanogaster gene for glutamate transporter DGLT-1, complete cds Length = 8035 Score = 42.1 bits (21), Expect = 1.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 171 caccagatccataagcgtagtctggggtg 199 |||||||||||||||||| |||||||||| Sbjct: 5164 caccagatccataagcgt-gtctggggtg 5137
>ref|XM_636926.1| Dictyostelium discoideum hypothetical protein (DDB0204309), partial mRNA Length = 483 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 ccctcatcccatcctttgat 261 |||||||||||||||||||| Sbjct: 341 ccctcatcccatcctttgat 322
>emb|AL670597.18| Mouse DNA sequence from clone RP23-235P16 on chromosome X, complete sequence Length = 186284 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 246 catcccatcctttgatcactgaacccag 273 |||||| ||||| ||||||||||||||| Sbjct: 100593 catcccctccttggatcactgaacccag 100620
>emb|AL954741.9| Zebrafish DNA sequence from clone CH211-255F4 in linkage group 22, complete sequence Length = 166560 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ttgcatgtccataactccct 245 |||||||||||||||||||| Sbjct: 5573 ttgcatgtccataactccct 5592
>gb|AY105607.1| Zea mays PCO107138 mRNA sequence Length = 808 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 ccctcatcccatcctttgatcact 265 |||| ||||||||||||||||||| Sbjct: 370 ccctgatcccatcctttgatcact 347 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,284,550 Number of Sequences: 3902068 Number of extensions: 3284550 Number of successful extensions: 54622 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 54524 Number of HSP's gapped (non-prelim): 93 length of query: 397 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 375 effective length of database: 17,147,199,772 effective search space: 6430199914500 effective search space used: 6430199914500 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)