>YHJG_ECOLI (P37645) Hypothetical protein yhjG|
          Length = 691

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
 Frame = -2

Query: 651 LTVSQTTPAASNANKQREGAEIITGAEACYAHSKELLKGLGFPGGVMPLRGLXECGLVRX 472
           L  S+ T +   A+K++ G + + G +A   ++ E L G G  GG++ LRG         
Sbjct: 200 LPFSEVTGSKGKADKEKVG-DYVFGLKAQGRYNGEPLTGTGKIGGMLALRG--------- 249

Query: 471 TGYVXMRQGKPY--EHHFRATGTRVRYDA*VTAYVEEG 364
                  +G P+  +  FR+  TRV +D  V   ++ G
Sbjct: 250 -------EGTPFPVQADFRSGNTRVAFDGVVNDPMKMG 280

>NOD_DROME (P18105) Kinesin-like protein Nod|
          Length = 666

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 22  LIEANTQNRKDTSIHARDNASRTHSCQCVHGRSFVSHTR 138
           ++E  T+NR+    +   N+SR+H+   +H +S   H+R
Sbjct: 183 ILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHHSR 221

>RPC1_GIALA (P25202) DNA-directed RNA polymerase III largest subunit (EC|
           2.7.7.6)
          Length = 1741

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -2

Query: 525 PGGVMPLRGLXECGLVRXTGYVXMRQGKPYEHHFRATGTRVRY 397
           PGGV P++   + G    TG +   +GK        +G RV +
Sbjct: 383 PGGVQPVKNKTDSGTKEGTGIIDRLKGKAGRFRSNLSGKRVNF 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,803,050
Number of Sequences: 219361
Number of extensions: 960963
Number of successful extensions: 2825
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)